View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13721_low_9 (Length: 368)
Name: NF13721_low_9
Description: NF13721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13721_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 13 - 354
Target Start/End: Original strand, 32731620 - 32731966
Alignment:
| Q |
13 |
gagaccagagaattcagaaaagcctttcccatttacctatataataaaccaaaataaatgaaacattagtataaagcaattagccctagctttattacta |
112 |
Q |
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| T |
32731620 |
gagaccagagaattcagaaaagcctttcccatttacctatataataaaccaaaataaatgaaacattagtataaagcaattagccctagctttattacta |
32731719 |
T |
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| Q |
113 |
caacatggtactactagttagtatatgagtttataaa-----gatacactgcattaataaaacattggataaaagaatgttgaaccttaagagctgggtt |
207 |
Q |
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| T |
32731720 |
caacatggtactactagttagtatatgagtttataaaataaagatacgctgcattaataaaacattggataaaagaatgttgaaccttaagagctgggtt |
32731819 |
T |
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| Q |
208 |
ggctacagagaaagtagccgaagccatgattaagcctacaaggaagaagaagttggagtatagagtcttgaagggaagcaaattcttagttatatgttat |
307 |
Q |
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| T |
32731820 |
ggctacagagaaagtagccgaagccatgattaagcctacaaggaagaagaagttggagtatagagtcttgaagggaagcaaattcttagttatatgttat |
32731919 |
T |
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| Q |
308 |
gttactataaagtgtagtaagatgtgggtacgtggatgtgtggttgt |
354 |
Q |
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| T |
32731920 |
gttactataaagtgtagtaagatgtgggtacgtggatgtgtggttgt |
32731966 |
T |
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