View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13724_low_14 (Length: 242)
Name: NF13724_low_14
Description: NF13724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13724_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 39689546 - 39689753
Alignment:
| Q |
19 |
cgggtccagttctctttaattgatgtgggataattctattattttacacaaacacatgatattatgttctacgagtctatttcactatttgacaataccc |
118 |
Q |
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| T |
39689546 |
cgggttcaattctctttaattgatgtgggataattctattattttacacaaacacatgatattatgttctacgagtctatttcactatttgaaaataccc |
39689645 |
T |
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| Q |
119 |
aaacactattataatagataatttatcacatatgagtttatatgattaaagtaggagtttgtttaatataaatggtctaaaagtggatccttactctttt |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
39689646 |
aaacactattataatagataatttatcacatatgagtttatatgattaaagtaggagtttgtttaatataaatggcctaaaagtggatccttactctttt |
39689745 |
T |
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| Q |
219 |
gaagtagg |
226 |
Q |
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|||||||| |
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| T |
39689746 |
gaagtagg |
39689753 |
T |
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