View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13727_low_2 (Length: 857)

Name: NF13727_low_2
Description: NF13727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13727_low_2
NF13727_low_2
[»] chr5 (31 HSPs)
chr5 (317-839)||(929937-930465)
chr5 (17-315)||(930541-930848)
chr5 (170-293)||(27498808-27498931)
chr5 (170-277)||(19145505-19145611)
chr5 (170-317)||(15931056-15931202)
chr5 (168-293)||(8484738-8484863)
chr5 (170-264)||(32059547-32059640)
chr5 (172-241)||(2499307-2499376)
chr5 (170-219)||(12317301-12317350)
chr5 (168-219)||(4603772-4603823)
chr5 (170-264)||(11465014-11465107)
chr5 (168-219)||(38631112-38631163)
chr5 (170-264)||(25586929-25587022)
chr5 (170-264)||(31288053-31288146)
chr5 (170-264)||(34310139-34310232)
chr5 (170-224)||(40330630-40330684)
chr5 (170-219)||(1827681-1827730)
chr5 (170-219)||(13108600-13108649)
chr5 (170-219)||(22392698-22392747)
chr5 (171-219)||(15971273-15971321)
chr5 (170-217)||(23270675-23270722)
chr5 (168-219)||(25750762-25750813)
chr5 (170-264)||(11926609-11926702)
chr5 (170-264)||(15641212-15641305)
chr5 (170-224)||(25343236-25343290)
chr5 (171-217)||(42006791-42006837)
chr5 (170-219)||(7085777-7085826)
chr5 (170-219)||(13038605-13038654)
chr5 (171-224)||(21042671-21042724)
chr5 (170-219)||(28614635-28614683)
chr5 (170-219)||(36954815-36954864)
[»] chr2 (13 HSPs)
chr2 (316-678)||(19255817-19256168)
chr2 (170-264)||(8192458-8192551)
chr2 (168-264)||(4567544-4567639)
chr2 (175-283)||(4618773-4618880)
chr2 (170-317)||(15037956-15038103)
chr2 (170-293)||(44946130-44946253)
chr2 (170-264)||(32845088-32845181)
chr2 (170-219)||(18976576-18976625)
chr2 (170-219)||(27269501-27269550)
chr2 (170-260)||(33827684-33827773)
chr2 (170-219)||(6714432-6714481)
chr2 (170-219)||(11941361-11941410)
chr2 (170-243)||(32526212-32526285)
[»] chr1 (23 HSPs)
chr1 (170-293)||(32729542-32729664)
chr1 (170-264)||(168198-168291)
chr1 (170-318)||(1138576-1138724)
chr1 (170-264)||(4621344-4621437)
chr1 (170-264)||(15059509-15059602)
chr1 (170-264)||(24674390-24674483)
chr1 (170-264)||(46607807-46607900)
chr1 (171-264)||(24122021-24122113)
chr1 (171-240)||(37349521-37349590)
chr1 (170-317)||(8077644-8077791)
chr1 (170-218)||(47091687-47091735)
chr1 (170-277)||(24216975-24217081)
chr1 (170-264)||(7197353-7197446)
chr1 (170-219)||(18533875-18533924)
chr1 (170-219)||(34778339-34778388)
chr1 (171-219)||(2272342-2272390)
chr1 (170-265)||(20487296-20487390)
chr1 (170-217)||(40802220-40802267)
chr1 (170-264)||(23734113-23734206)
chr1 (170-264)||(23741305-23741398)
chr1 (170-260)||(29057448-29057537)
chr1 (168-218)||(52592555-52592605)
chr1 (170-219)||(27455017-27455066)
[»] chr8 (20 HSPs)
chr8 (168-277)||(34694670-34694778)
chr8 (170-264)||(3734730-3734823)
chr8 (170-264)||(4718646-4718739)
chr8 (168-264)||(27746442-27746537)
chr8 (170-264)||(34237762-34237855)
chr8 (170-219)||(20305909-20305958)
chr8 (170-219)||(21092542-21092591)
chr8 (169-277)||(8387538-8387645)
chr8 (172-264)||(28193477-28193568)
chr8 (170-277)||(26168942-26169048)
chr8 (170-264)||(28964034-28964127)
chr8 (170-264)||(39349257-39349350)
chr8 (170-219)||(2618187-2618236)
chr8 (170-219)||(18532108-18532157)
chr8 (170-219)||(19471610-19471659)
chr8 (170-219)||(19542534-19542583)
chr8 (170-219)||(19590113-19590162)
chr8 (175-279)||(41070767-41070870)
chr8 (172-217)||(28465781-28465826)
chr8 (170-219)||(42643269-42643318)
[»] scaffold0576 (1 HSPs)
scaffold0576 (170-264)||(5189-5282)
[»] chr7 (33 HSPs)
chr7 (170-264)||(2751272-2751365)
chr7 (170-317)||(7275278-7275425)
chr7 (170-264)||(22638293-22638386)
chr7 (168-219)||(28089815-28089866)
chr7 (170-264)||(7175969-7176062)
chr7 (170-264)||(40543017-40543110)
chr7 (170-219)||(17212054-17212103)
chr7 (171-264)||(22119890-22119982)
chr7 (172-264)||(42814867-42814958)
chr7 (170-277)||(8435789-8435895)
chr7 (170-277)||(12211629-12211735)
chr7 (170-277)||(21574196-21574303)
chr7 (170-277)||(23330833-23330939)
chr7 (170-264)||(2103056-2103149)
chr7 (170-264)||(18044108-18044201)
chr7 (170-264)||(21217940-21218033)
chr7 (170-216)||(25333420-25333466)
chr7 (170-240)||(40332100-40332170)
chr7 (171-224)||(577681-577734)
chr7 (171-240)||(1469114-1469183)
chr7 (170-219)||(2344300-2344349)
chr7 (171-283)||(3950876-3950988)
chr7 (170-219)||(19421232-19421281)
chr7 (170-219)||(23854397-23854446)
chr7 (170-262)||(11997850-11997941)
chr7 (171-219)||(13332574-13332622)
chr7 (172-264)||(28646972-28647063)
chr7 (174-286)||(47380903-47381014)
chr7 (172-219)||(27312155-27312202)
chr7 (170-264)||(7799939-7800032)
chr7 (170-264)||(10091189-10091282)
chr7 (171-264)||(22696322-22696414)
chr7 (170-219)||(31713046-31713095)
[»] chr6 (16 HSPs)
chr6 (170-264)||(15360205-15360298)
chr6 (170-277)||(9208249-9208355)
chr6 (170-264)||(34147343-34147436)
chr6 (170-264)||(34159959-34160052)
chr6 (170-264)||(9238972-9239065)
chr6 (170-264)||(33499471-33499565)
chr6 (170-264)||(12591634-12591727)
chr6 (170-219)||(22576064-22576113)
chr6 (170-219)||(28672064-28672113)
chr6 (170-264)||(3222742-3222834)
chr6 (168-219)||(9843933-9843984)
chr6 (172-279)||(10377714-10377820)
chr6 (173-264)||(11448871-11448961)
chr6 (172-242)||(8260486-8260556)
chr6 (170-219)||(13753237-13753286)
chr6 (170-219)||(21982471-21982520)
[»] chr4 (19 HSPs)
chr4 (170-264)||(25852211-25852304)
chr4 (170-262)||(13873404-13873495)
chr4 (170-277)||(41621690-41621796)
chr4 (170-264)||(27528902-27528995)
chr4 (170-264)||(40058959-40059052)
chr4 (170-264)||(46714389-46714483)
chr4 (170-264)||(52983616-52983709)
chr4 (170-264)||(54127449-54127542)
chr4 (168-317)||(20566344-20566494)
chr4 (171-264)||(34835527-34835619)
chr4 (171-243)||(42245744-42245816)
chr4 (172-219)||(34722169-34722216)
chr4 (170-264)||(32986194-32986287)
chr4 (170-264)||(34844865-34844958)
chr4 (170-217)||(5609355-5609402)
chr4 (170-264)||(33696386-33696479)
chr4 (170-219)||(1985833-1985882)
chr4 (171-228)||(3089454-3089511)
chr4 (170-219)||(19660683-19660732)
[»] chr3 (30 HSPs)
chr3 (170-220)||(55287800-55287850)
chr3 (170-266)||(30257621-30257716)
chr3 (170-264)||(8456257-8456350)
chr3 (170-264)||(30807260-30807353)
chr3 (170-264)||(35492908-35493001)
chr3 (170-264)||(53424283-53424376)
chr3 (170-259)||(4252508-4252596)
chr3 (171-243)||(4462631-4462703)
chr3 (170-266)||(40940822-40940917)
chr3 (170-264)||(7485632-7485725)
chr3 (170-264)||(40133556-40133649)
chr3 (170-264)||(46576345-46576438)
chr3 (170-264)||(48977385-48977478)
chr3 (186-268)||(51390942-51391023)
chr3 (170-266)||(18176992-18177087)
chr3 (170-219)||(34492726-34492775)
chr3 (170-219)||(45529905-45529954)
chr3 (170-293)||(7470292-7470415)
chr3 (177-264)||(15566606-15566692)
chr3 (168-219)||(25344208-25344259)
chr3 (172-219)||(25379760-25379807)
chr3 (170-264)||(45272523-45272616)
chr3 (172-275)||(55371381-55371483)
chr3 (170-264)||(25289821-25289914)
chr3 (171-224)||(6041818-6041871)
chr3 (170-219)||(21362940-21362989)
chr3 (171-264)||(26158816-26158908)
chr3 (170-219)||(31537989-31538038)
chr3 (170-219)||(50582989-50583038)
chr3 (170-219)||(52455800-52455849)
[»] scaffold0070 (1 HSPs)
scaffold0070 (170-264)||(40322-40415)
[»] scaffold0026 (1 HSPs)
scaffold0026 (170-264)||(97473-97566)
[»] scaffold0623 (1 HSPs)
scaffold0623 (171-264)||(1163-1255)
[»] scaffold0366 (2 HSPs)
scaffold0366 (171-264)||(9406-9498)
scaffold0366 (171-219)||(12151-12199)
[»] scaffold0199 (1 HSPs)
scaffold0199 (170-219)||(8558-8607)
[»] scaffold0459 (1 HSPs)
scaffold0459 (171-219)||(10844-10892)
[»] scaffold0460 (1 HSPs)
scaffold0460 (170-265)||(8285-8379)
[»] scaffold0328 (1 HSPs)
scaffold0328 (170-219)||(14988-15037)
[»] scaffold0068 (1 HSPs)
scaffold0068 (170-219)||(41795-41844)
[»] scaffold0051 (1 HSPs)
scaffold0051 (170-219)||(53022-53071)
[»] scaffold0028 (1 HSPs)
scaffold0028 (170-243)||(27773-27846)


Alignment Details
Target: chr5 (Bit Score: 478; Significance: 0; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 317 - 839
Target Start/End: Complemental strand, 930465 - 929937
Alignment:
Q  317 caatgcgagattgaacaattcaaagttttttattcctaaatcaccctcttttttgtcctaaca------attccaacaaaccgatgatgttttcataatt 410  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||      ||||||||||||| |||||||||||||||||    
T  930465 caatccgagattgaacaattcaaagttttttattcctaaatctccctcttttttgtcctaacagattttattccaacaaacccatgatgttttcataatt 930366  T
Q  411 tcctcatctccttgccataggaatcttctctgcatctttgttagcaaatatatgactttcttaggatctttaaagaaggagaagaaataaagaggcagtg 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  930365 tcctcatctccttgccataggaatcttctctgcatctttgttagcaaatatatgactttcttaggatctttaaagaaggagaagaaataaagaggcagtg 930266  T
Q  511 aagatgagacgtcggaactgatcaatgtcgctcgacctccaattgacaataatcttcctttaaaagacgacaatctagacttgaatgaactaattacagg 610  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  930265 aagatgagacgtcggaactgatcaatgtcgctcgacctccaattgacaataatcttcctttaaaagacgacaatctagacttgaatgaactaattacggg 930166  T
Q  611 ttcctaagttaataatcttcttgggtttgcgccaacaggtattcccaagaacttaaagggaattgtaccttatagggcatcaaagaaaagttgttgatgc 710  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  930165 ttcctaagtcaataatcttcttgggtttgcgccaacaggtattcccaagaacttaaagggaattgtaccttatagggcatccaagaaaagttgttgatgc 930066  T
Q  711 ttttaccacgaattcgcatatgttcagtgcattcacgttaattttatcataattgacaacaaaacttaatgtcatttcaaagcttcgcaagataccctta 810  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  930065 ttttaccacaaattcgcatatgttcagtgcattcacgttaattttatcataattgacaacaaaacttaatgtcatttcaaagcttcgcaagataccctta 929966  T
Q  811 tttcatggatggcttggcatgagactcgt 839  Q
    |||||||||||||||||||||||||||||    
T  929965 tttcatggatggcttggcatgagactcgt 929937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 17 - 315
Target Start/End: Complemental strand, 930848 - 930541
Alignment:
Q  17 agtacatatgttagagtaaaagtttcagggtcagaaacc----------gtatcaaaacttatttgttcagcagttacccaatccttaatcttgtcgtac 106  Q
    |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  930848 agtacatatgttagagtaaaagtttcagggtcagaaaccttaattcttcgtatcaaaacttatttgttcagcaattacccaattcttaatcttgtcgtac 930749  T
Q  107 ctgaaattgagaatttgtttgcattaagcatcatccaacaccattttaatatcaatacgagatccatttggggttggcttagtggttggcttgaaatctt 206  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| || ||    
T  930748 atgaaattgagaatttgtttgcattaagcatcatccaacaccattttaatatcaatacgagatccatttggggttggcccagtggttggcttgagatttt 930649  T
Q  207 agagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaattcatacataacttgctatggcttagaacagagccct 306  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||    
T  930648 agagtttgctcctctcaaagtctcaggttcgattcccacttggtgccaatttcggtggacaaattcatacatagcttgctccggcttagaaca-agccct 930550  T
Q  307 cgtaagtgg 315  Q
    || ||||||    
T  930549 cgcaagtgg 930541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 27498931 - 27498808
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 268  Q
    ||||||||||||| | |||||||||||||| |||||| |||||||||||| |  |  |||| |||||||||||| | |||||||||||||||||| | ||    
T  27498931 ccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctc-tggtgccaatttcggtgggctaa 27498833  T
Q  269 attcatacataacttgctatggctt 293  Q
     | |||||||| |||||| ||||||    
T  27498832 gtccatacatagcttgctctggctt 27498808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 19145611 - 19145505
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||||| ||||||||| ||||  ||||| |||| ||||||| ||||  |||| |||||||||||| | |||||||||||||||||| |||     
T  19145611 ccatttggggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctc-tggtgccaatttcggtgggcaag 19145513  T
Q  270 ttcataca 277  Q
    | ||||||    
T  19145512 tccataca 19145505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 15931056 - 15931202
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||||| |||||||| |||||  ||||| ||||||||| |||   || |||| |||||||||||| | ||||||||||||||||||  ||     
T  15931056 ccatttggggttggcctagtggttagcttgggatcttggagtttgcttcttcacaagtctcaggttcgattccctc-tggtgccaatttcggtggctaag 15931154  T
Q  270 ttcatacataacttgctatggcttagaacagagccctcgtaagtgggc 317  Q
    | |||||| | | |||| ||||||  ||||| || |||| ||||||||    
T  15931155 tccatacagagcctgctctggctttaaacagggctctcgcaagtgggc 15931202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 293
Target Start/End: Complemental strand, 8484863 - 8484738
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac- 266  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||| ||||||| | |||||||||||||||||| |     
T  8484863 atccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctc-tggtgccaatttcggtgggct 8484765  T
Q  267 aaattcatacataacttgctatggctt 293  Q
    || |||||||| | |||||| ||||||    
T  8484764 aagttcatacagagcttgctctggctt 8484738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 32059640 - 32059547
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||  | ||||||||||||||||||    
T  32059640 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttc-tggtgccaatttcggtgg 32059547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 2499376 - 2499307
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattc 241  Q
    |||||||||||||||||||| || ||||  ||||| || ||||||||||||||| |||| ||||||||||    
T  2499376 atttggggttggcttagtggctgacttgggatcttggaatttgctcctttcaaagtctcaggttcgattc 2499307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 12317350 - 12317301
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  12317350 ccatttggggttggcctagtggttggcttggaatcttggagtttgctcct 12317301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 4603772 - 4603823
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  4603772 atccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 4603823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 11465107 - 11465014
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaat-tctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||| |||||||| ||||| ||||||||||||||| ||||||||||| | ||||| |||| ||||||||| || | |||||||||||| |||||    
T  11465107 ccatttcgggttggcctagtgattggcttgaaatcttggagtttgctcc-tccaaatgtctcaggttcgatttcctc-tggtgccaattttggtgg 11465014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 38631163 - 38631112
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  38631163 atccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 38631112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 25586929 - 25587022
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||||||| || | ||||||||||||||||||    
T  25586929 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctc-tggtgccaatttcggtgg 25587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 31288146 - 31288053
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||| |||||||| ||||||||||||||  ||||| ||||||||||||   ||  ||||  |||||||||||  |||||||||||||||||||    
T  31288146 ccattttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccc-tttggtgccaatttcggtgg 31288053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 34310139 - 34310232
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||| |||||| |||||| ||||||||||||    |  |||| |||||||||||| | |||||||||||| |||||    
T  34310139 ccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaattttggtgg 34310232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 40330630 - 40330684
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 224  Q
    ||||||| |||||||||||||||| |||||| ||||| |||||||||||| ||||    
T  40330630 ccatttgaggttggcttagtggttagcttgagatcttggagtttgctcctctcaa 40330684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 1827730 - 1827681
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||    
T  1827730 ccatttggggttgacctagtggttggcttgagatcttggagtttgctcct 1827681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 13108649 - 13108600
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  13108649 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 13108600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 22392698 - 22392747
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  22392698 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 22392747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 15971321 - 15971273
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||||||||    
T  15971321 catttagggttggcttagtggttggcttgggatcttggagtttgctcct 15971273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 23270722 - 23270675
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctc 217  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  23270722 ccatttggggttggcctagtggttggcttgggatcttggagtttgctc 23270675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 25750813 - 25750762
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  25750813 atccatttggggttggcctagtggttgacttgggatcttggagtttgctcct 25750762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 11926702 - 11926609
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||||||    |  |||| |||| ||||||| | ||||||||||||||||||    
T  11926702 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccctc-tggtgccaatttcggtgg 11926609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 15641305 - 15641212
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||| || ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  15641305 ccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 15641212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 25343236 - 25343290
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 224  Q
    ||||||||||||||| ||||||||| ||||||||||| || | ||||| ||||||    
T  25343236 ccatttggggttggcctagtggttgacttgaaatcttggattgtgctcttttcaa 25343290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 42006791 - 42006837
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctc 217  Q
    |||||||||||||  ||||||||||||||| ||||| ||||||||||    
T  42006791 catttggggttgggctagtggttggcttgagatcttggagtttgctc 42006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 7085826 - 7085777
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    |||||||||| |||||||||||||||||||  ||||| |||||| |||||    
T  7085826 ccatttggggctggcttagtggttggcttgggatcttggagttttctcct 7085777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 13038654 - 13038605
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||||||    
T  13038654 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcct 13038605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 21042724 - 21042671
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 224  Q
    ||||||||||||| |||||| |||| |||  ||||| |||||||||||||||||    
T  21042724 catttggggttggtttagtgattggtttgggatcttggagtttgctcctttcaa 21042671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 28614683 - 28614635
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    |||||||||||||| | |||||||||||||| ||||||||||||| ||||    
T  28614683 ccatttggggttgg-tgagtggttggcttgagatcttagagtttgttcct 28614635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 36954815 - 36954864
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  36954815 ccatttggggttggcctagtggttgccttgggatcttggagtttgctcct 36954864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 4e-34; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 316 - 678
Target Start/End: Complemental strand, 19256168 - 19255817
Alignment:
Q  316 gcaatgcgagattgaacaattcaaagttttttattcctaaatcaccctcttttttgtcctaacaa------ttccaacaaaccgatgatgttttcataat 409  Q
    ||||||| |||||||||||||||| |||||||| ||||||||| | ||||||| | ||||||||       |||||||||||| ||||||||||| || |    
T  19256168 gcaatgcaagattgaacaattcaaggttttttactcctaaatctctctcttttctatcctaacagatttctttccaacaaacccatgatgttttcctatt 19256069  T
Q  410 ttcctcatctccttgccataggaatcttctctgcatctttgttagcaaatatatgactttcttaggatctttaaagaaggagaagaaataaagaggcagt 509  Q
    |||||||||||||  ||||||||| ||||| | |||||| |||               ||| ||||  |||||||  | |||||||||||| |||||| |    
T  19256068 ttcctcatctcctccccataggaaccttctatccatcttcgtt---------------ttcataggtgctttaaaatatgagaagaaataaggaggcaat 19255984  T
Q  510 gaagatgagacgtcggaactgatcaatgtcgctcgacctccaattgacaataatcttcctttaaaagacgacaatctagacttgaatgaacta-attaca 608  Q
    |||||| ||| |   ||  |||||||  |||| | |||||  |||||||| |||||||||||  | || ||||||||||||||||||||| |  ||||||    
T  19255983 gaagataagatg---gagttgatcaacatcgcgctacctcagattgacaagaatcttcctttccatgatgacaatctagacttgaatgaaatggattaca 19255887  T
Q  609 ggttcctaagttaataatcttcttgggtttgcgccaacaggtattcccaagaacttaaagggaattgtac 678  Q
    |||||||||||| | ||||||||||| |||| || ||| | ||||||||||||||||||||| |||||||    
T  19255886 ggttcctaagttgacaatcttcttggatttgtgcgaacggatattcccaagaacttaaaggggattgtac 19255817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 8192551 - 8192458
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| |||| ||||||| ||||  |||| |||||||||||| | |||||||||| |||||||    
T  8192551 ccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctc-tggtgccaatgtcggtgg 8192458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 4567639 - 4567544
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||||| |||| |||||||||  |||||  ||||||||||||   || |||| ||||||||| || | ||||||||||||||||||    
T  4567639 atccatttggggttggcctagtagttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatttcctc-tggtgccaatttcggtgg 4567544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 283
Target Start/End: Complemental strand, 4618880 - 4618773
Alignment:
Q  175 tggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaattcat 274  Q
    |||||||||| |||||||||||||| |||||| |||| ||||||| ||||  | || ||||||||| || | ||||||||||||||| || ||| | |||    
T  4618880 tggggttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcc-cctggtgccaatttcggcgggcaagtccat 4618782  T
Q  275 acataactt 283  Q
    ||| |||||    
T  4618781 acaaaactt 4618773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 15037956 - 15038103
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 268  Q
    ||||||||||||||| ||||||||| || |  ||||| ||||||||||||   ||  |||| ||||||||||||  ||||||||||||||||||| | ||    
T  15037956 ccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccc-tttggtgccaatttcggtgggctaa 15038054  T
Q  269 attcatacataacttgctatggcttagaacagagccctcgtaagtgggc 317  Q
     | |||||| | |||||| ||||||  ||| |||||| || ||||||||    
T  15038055 gtccatacagagcttgctttggctttaaacggagcccccgcaagtgggc 15038103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 44946253 - 44946130
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 268  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    |  |||| ||||||||||||  ||||||||||||||||||| | ||    
T  44946253 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc-tttggtgccaatttcggtgggctaa 44946155  T
Q  269 attcatacataacttgctatggctt 293  Q
     | |||||| |||||||| ||||||    
T  44946154 gtccatacagaacttgctctggctt 44946130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 32845088 - 32845181
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| |||| ||| |||||  ||||| ||||||||||||   ||| | || |||||||||||| | ||||||||||||||||||    
T  32845088 ccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccctc-tggtgccaatttcggtgg 32845181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 18976625 - 18976576
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  18976625 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 18976576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 27269550 - 27269501
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  27269550 ccatttggggttggcatagtggttggcttgggatcttcgagtttgctcct 27269501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 33827773 - 33827684
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcg 260  Q
    ||||||||||||||| ||||||||||||||  ||||| ||| ||||||||    |  |||| |||||||||||| | ||||||||||||||    
T  33827773 ccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcg 33827684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 6714481 - 6714432
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||| ||||| || |||||||||||| ||||| ||||||||||||    
T  6714481 ccatttgggattggcctaatggttggcttgagatcttggagtttgctcct 6714432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 11941410 - 11941361
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    
T  11941410 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcct 11941361  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 32526285 - 32526212
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattccc 243  Q
    |||||||| ||||||||||||||||  |||  |||||  ||||||||||| ||||  |||| ||||||||||||    
T  32526285 ccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccc 32526212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 9e-23; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 32729542 - 32729664
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||||| ||||| |||| ||||||||||||   |||||||||||||||||| |||     
T  32729542 ccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccc-tatggtgccaatttcggtgggcaag 32729640  T
Q  270 ttcatacataacttgctatggctt 293  Q
    | |||||| | |||||| ||||||    
T  32729641 tccatacagagcttgctctggctt 32729664  T

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Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 168198 - 168291
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaa-ttctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||| |||||| ||||||||||||||  ||||||||||||||| ||||||||  |||| |||||||||||| | ||||||||||||||||||    
T  168198 ccatttggagttggcctagtggttggcttgggatcttagagtttgct-ctttcaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 168291  T

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Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 318
Target Start/End: Original strand, 1138576 - 1138724
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||| | ||||||||||||||| ||||| |||| ||||||| ||||  |||  ||||||| || | | | ||||||||||||||||||||     
T  1138576 ccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctc-tagtgccaatttcggtggacaag 1138674  T
Q  270 ttcatacataac-ttgctatggcttagaacagagccctcgtaagtgggca 318  Q
    | |||||| | | ||||| || |||||||||| ||||| | |||||||||    
T  1138675 tccatacagagctttgctctgacttagaacagggcccttgcaagtgggca 1138724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 4621437 - 4621344
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  4621437 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 4621344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 15059602 - 15059509
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||    |  |||| |||||||||| | | ||||||||||||||||||    
T  15059602 ccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattctctc-tggtgccaatttcggtgg 15059509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 24674390 - 24674483
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  24674390 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 24674483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 46607807 - 46607900
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  46607807 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 46607900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 24122021 - 24122113
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||||||||||||||||||  ||||| | ||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  24122021 catttggggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 24122113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 37349521 - 37349590
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgatt 240  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||| |||   |||| |||||||||    
T  37349521 catttggggttggtttagtggttgacttgagatcttagagtttgctcctctcatgatctcaggttcgatt 37349590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 8077644 - 8077791
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 268  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||| | | |||||||||||||||||| | ||    
T  8077644 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctc-tggtgccaatttcggtgggctaa 8077742  T
Q  269 attcatacataacttgctatggcttagaacagagccctcgtaagtgggc 317  Q
     | |||||| | |||||| ||||||  ||||| |||| || ||||||||    
T  8077743 gtccatacagagcttgctctggctttaaacagggcccccgcaagtgggc 8077791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 47091687 - 47091735
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcc 218  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  47091687 ccatttggggttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 24216975 - 24217081
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||| | ||||||||| ||||  ||||| |||| ||||||| ||||  |||| ||||||||| ||  |||||||||||||||||||  |||    
T  24216975 ccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacc-tttggtgccaatttcggtgggtaaa 24217073  T
Q  270 ttcataca 277  Q
    | ||||||    
T  24217074 tccataca 24217081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 7197446 - 7197353
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | || |||||||||||||||    
T  7197446 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tgatgccaatttcggtgg 7197353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 18533924 - 18533875
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||| | ||||||||| ||||| ||||||||||||||||||    
T  18533924 ccatttggggttgacatagtggttgacttgagatcttagagtttgctcct 18533875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 34778339 - 34778388
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  34778339 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 34778388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 2272342 - 2272390
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    |||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  2272342 catttggggttggcctagtggttgacttgggatcttagagtttgctcct 2272390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 20487390 - 20487296
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgga 265  Q
    |||||||||||||| ||||||||||||| |  ||||| ||||||||||||    |  ||||  ||||||||||| | |||||||||||||||||||    
T  20487390 ccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctc-tggtgccaatttcggtgga 20487296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 40802267 - 40802220
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctc 217  Q
    ||||||||||||||||| ||||||||||||| || || ||||||||||    
T  40802267 ccatttggggttggctttgtggttggcttgagatattggagtttgctc 40802220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 23734113 - 23734206
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||| ||||| |||||||||  |||||||| |||||||||    |  |||| |||||||||||| | || |||||||||||||||    
T  23734113 ccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctc-tgatgccaatttcggtgg 23734206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 23741305 - 23741398
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||| ||||| |||||||||  |||||||| |||||||||    |  |||| |||||||||||| | || |||||||||||||||    
T  23741305 ccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccctc-tgatgccaatttcggtgg 23741398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 29057537 - 29057448
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcg 260  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||| ||   ||  |||| |||||||||||| ||| ||||||||||||    
T  29057537 ccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctctt-gtgccaatttcg 29057448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 52592555 - 52592605
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcc 218  Q
    |||||||| | |||||  ||||||||||||||| |||||||||||||||||    
T  52592555 atccatttagagttggtctagtggttggcttgagatcttagagtttgctcc 52592605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 27455066 - 27455017
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    
T  27455066 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcct 27455017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 9e-17; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 34694778 - 34694670
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggaca 267  Q
    ||||||||||||||||  ||||||||| ||||  ||||| |||||||||||| ||||  |||  ||||||||| |||  |||||||||||||||||| ||    
T  34694778 atccatttggggttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgatt-ccatctggtgccaatttcggtgggca 34694680  T
Q  268 aattcataca 277  Q
    ||||||||||    
T  34694679 aattcataca 34694670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 3734823 - 3734730
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  3734823 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 3734730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 4718646 - 4718739
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||||||   |  |||| |||||||||||| | ||||||||||||||||||    
T  4718646 ccatttggggttggcctagtggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 4718739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 264
Target Start/End: Complemental strand, 27746537 - 27746442
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||||| |||||||||| |||  ||||| ||||||||||||   ||  |||| ||||||||||||  |||||||||||||||||||    
T  27746537 atccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc-tttggtgccaatttcggtgg 27746442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 34237855 - 34237762
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  34237855 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 34237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 20305909 - 20305958
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  20305909 ccatttggggttggcctagtggttggcttgggatcttagagtttgctcct 20305958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 21092542 - 21092591
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  21092542 ccatttggggttggcctagtggttggcttgggatcttagagtttgctcct 21092591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 8387645 - 8387538
Alignment:
Q  169 tccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaa 268  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||| || |||   ||||  |||||||| || | |||||||||||| ||||| |||    
T  8387645 tccatttggggttggcctagtggttgtcttgagatcttagagtttgcttctctcagggtctcaagttcgatttcctc-tggtgccaattttggtgggcaa 8387547  T
Q  269 attcataca 277  Q
     | ||||||    
T  8387546 gtccataca 8387538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 28193477 - 28193568
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  28193477 atttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 28193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 26169048 - 26168942
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    |||||| |||||||| |||||||| |||||  ||||| |||||||||||| ||||  |||| |||| |||| || | || ||||||||||||||| |||     
T  26169048 ccatttagggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgatt-cctcctgatgccaatttcggtgggcaag 26168950  T
Q  270 ttcataca 277  Q
    ||||||||    
T  26168949 ttcataca 26168942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 28964034 - 28964127
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||  |||||||||| |||| |||||||||||||||||| | ||  | ||  |||||||| |||  ||||||||||||||||||    
T  28964034 ccatttggggttggtctagtggttggtttgagatcttagagtttgctcctcttaaggtttcatgttcgatt-ccatctggtgccaatttcggtgg 28964127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 39349257 - 39349350
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||||  |||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  39349257 ccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 39349350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 2618187 - 2618236
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  2618187 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 2618236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 18532108 - 18532157
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  18532108 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 18532157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 19471610 - 19471659
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  19471610 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 19471659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 19542534 - 19542583
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  19542534 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 19542583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 19590162 - 19590113
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  19590162 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 19590113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 41070767 - 41070870
Alignment:
Q  175 tggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaattcat 274  Q
    |||||||||| ||||||||| ||||  ||||| |||| |||| || ||||  ||||  |||||||||||  |||||| |||||||||||| ||| |||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccct-ttggtgtcaatttcggtgggcaagttcat 41070865  T
Q  275 acata 279  Q
    |||||    
T  41070866 acata 41070870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 28465781 - 28465826
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctc 217  Q
    |||||| ||||| |||||||||| ||||||||||||||||| ||||    
T  28465781 atttggagttggtttagtggttgacttgaaatcttagagttggctc 28465826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 42643318 - 42643269
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  42643318 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcct 42643269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 5282 - 5189
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  5282 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 5189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 2751272 - 2751365
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  2751272 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 2751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 317
Target Start/End: Original strand, 7275278 - 7275425
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 268  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | |||||||||||||||||| | ||    
T  7275278 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgggctaa 7275376  T
Q  269 attcatacataacttgctatggcttagaacagagccctcgtaagtgggc 317  Q
     | |||||| | |||||| ||||||  ||||| |||| || ||||||||    
T  7275377 gtccatacagagcttgctctggctttaaacagggcccccgcaagtgggc 7275425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 22638293 - 22638386
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaa-ttctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||  ||||||||| ||||| ||||||||||||||| ||||||||  |||| |||||||||||| | |||||| |||||||||||    
T  22638293 ccatttggggttggtctagtggttgacttgagatcttagagtttgct-ctttcaaaggtctcaggttcgattccctc-tggtgctaatttcggtgg 22638386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 28089815 - 28089866
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  28089815 atccatttggggttggcctagtggttggcttgagatcttggagtttgctcct 28089866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 7176062 - 7175969
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  7176062 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 7175969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 40543110 - 40543017
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  40543110 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 40543017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 17212054 - 17212103
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  17212054 ccatttggggttggcttagtggttggcttgggatcttggagtttgctcct 17212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 22119890 - 22119982
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 22119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 42814867 - 42814958
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||| |||||||||||||||| ||||  ||||| |||||||||||| |  || |||| |||||||||||| | ||||| ||||||||||||    
T  42814867 atttggagttggcttagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccctc-tggtgtcaatttcggtgg 42814958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 8435895 - 8435789
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||||  ||||||||| ||||  ||||| |||||||||||||| ||  |||  ||||||||| || | |||||||||||||||||| |||     
T  8435895 ccatttggggttggtctagtggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctc-tggtgccaatttcggtgggcaag 8435797  T
Q  270 ttcataca 277  Q
    | ||||||    
T  8435796 tccataca 8435789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 12211735 - 12211629
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||||| |||||||||||||   ||||| |||| ||||||| ||||  |||| |||| |||| || | |||||||||||||| |||||||     
T  12211735 ccatttggggttggcctagtggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctc-tggtgccaatttcgatggacaag 12211637  T
Q  270 ttcataca 277  Q
    | ||||||    
T  12211636 tccataca 12211629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 21574303 - 21574196
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||||| |||||||||| |||  || || |||| ||||||| ||||  || | ||||||||||||  |||||||||| |||||||| |||     
T  21574303 ccatttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggcaag 21574204  T
Q  270 ttcataca 277  Q
    | ||||||    
T  21574203 tccataca 21574196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 23330939 - 23330833
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    |||||||||||| || ||||||||||||||  || ||||||| ||||||| ||||  |||| ||||||| |||| |  ||||||||||||||||| |||     
T  23330939 ccatttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctc-cggtgccaatttcggtgggcaag 23330841  T
Q  270 ttcataca 277  Q
    | ||||||    
T  23330840 tccataca 23330833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 2103056 - 2103149
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  2103056 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 2103149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 18044108 - 18044201
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  || | |||||||||||| ||| ||||||||||||||||    
T  18044108 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccctctt-gtgccaatttcggtgg 18044201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 21218033 - 21217940
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | || |||||||||||||||    
T  21218033 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tgatgccaatttcggtgg 21217940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 25333420 - 25333466
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgct 216  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||    
T  25333420 ccatttggggttggcttagtggttggcttgggatcttggagtttgct 25333466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 40332100 - 40332170
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgatt 240  Q
    |||||||| |||||  ||||||||||||||||||||| |||||||||||| | ||  |||| |||||||||    
T  40332100 ccatttggagttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatt 40332170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 577681 - 577734
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 224  Q
    |||||||||||||| |||||||| |||||  |||||||||||||||| ||||||    
T  577681 catttggggttggcctagtggtttgcttgggatcttagagtttgctcatttcaa 577734  T

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Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 1469114 - 1469183
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgatt 240  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||| || | ||||  |||| |||||||||    
T  1469114 catttggggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatt 1469183  T

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Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 2344300 - 2344349
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  2344300 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 2344349  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 283
Target Start/End: Complemental strand, 3950988 - 3950876
Alignment:
Q  171 catttggggttggcttagtggttggcttga-aatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    |||||||||||||  ||||||||||||||| |||||| |||  ||||||| ||||  ||||  |||||||||||  ||||||| ||||| |||||||||     
T  3950988 catttggggttggtctagtggttggcttgagaatcttggagcgtgctcctctcaatgtctcatgttcgattccc-tttggtgctaattttggtggacaag 3950890  T
Q  270 ttcatacataactt 283  Q
    | ||| ||||||||    
T  3950889 tccatgcataactt 3950876  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 19421232 - 19421281
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||| ||||||||||||||||  ||||| ||||||||||||    
T  19421232 ccatttggggttgacttagtggttggcttgggatcttggagtttgctcct 19421281  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 23854397 - 23854446
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  23854397 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 23854446  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 11997850 - 11997941
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggt 262  Q
    ||||||| ||||||  ||||||||||||||  ||||| |||||||||||| |  |  |||| |||||||||||| | ||||||||||||||||    
T  11997850 ccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctc-tggtgccaatttcggt 11997941  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 13332622 - 13332574
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  13332622 catttggggttggcctagtggttggcttgggatcttggagtttgctcct 13332574  T

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Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 28646972 - 28647063
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||| ||||| ||| ||||  ||||| |||| |||| || ||||  |||| |||||||||||| | ||||||||||||||||||    
T  28646972 atttggggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 28647063  T

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Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 47380903 - 47381014
Alignment:
Q  174 ttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaattca 273  Q
    ||||||||||| ||||||||||||||| || ||  ||||||||| | ||||  | |  |||||||||| ||||| |||||||||||||||  ||| | ||    
T  47380903 ttggggttggcctagtggttggcttgagattttgtagtttgctcttctcaagattttaggttcgattctcactt-gtgccaatttcggtgtgcaagtcca 47381001  T
Q  274 tacataacttgct 286  Q
    |||||| ||||||    
T  47381002 tacatagcttgct 47381014  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 27312155 - 27312202
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  27312155 atttggggttggcctagtggttggcttgggatcttggagtttgctcct 27312202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 7800032 - 7799939
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||| | ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||| ||||    
T  7800032 ccatttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcagtgg 7799939  T

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Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 10091189 - 10091282
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  10091189 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 10091282  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 22696322 - 22696414
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||| ||||||||| |||||||||  |||  ||||| |||| ||||||| ||||  |||| |||| ||||||| || |||||||||||||||||    
T  22696322 cattaggggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctct-ggtgccaatttcggtgg 22696414  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 31713095 - 31713046
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||||||    
T  31713095 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcct 31713046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 15360298 - 15360205
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  15360298 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 15360205  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 9208249 - 9208355
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    |||||||||||||   |||||||||| |||  ||||| |||||||||||| ||||  |||| |||||||||||| | |||||||||||||||||| |||     
T  9208249 ccatttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccc-cctggtgccaatttcggtgggcaag 9208347  T
Q  270 ttcataca 277  Q
    | ||||||    
T  9208348 tccataca 9208355  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 34147343 - 34147436
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttca-aattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||| ||| || || |||| |||||||||||| | ||||||||||||||||||    
T  34147343 ccatttggggttggcctagtggttggcttgggatcttggagtttgct-cttccagaagtctcaggttcgattccctc-tggtgccaatttcggtgg 34147436  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 34159959 - 34160052
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttca-aattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||| ||| || || |||| |||||||||||| | ||||||||||||||||||    
T  34159959 ccatttggggttggcctagtggttggcttgggatcttggagtttgct-cttccagaagtctcaggttcgattccctc-tggtgccaatttcggtgg 34160052  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 9238972 - 9239065
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  9238972 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 9239065  T

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Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 33499471 - 33499565
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttc-gattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| | ||||||||||||  ||||| |||||||||||| ||||  |||| ||||| ||||||| | ||||| ||||||||||||    
T  33499471 ccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctc-tggtgtcaatttcggtgg 33499565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 12591634 - 12591727
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | | ||||||||||| ||||    
T  12591634 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tcgtgccaatttcagtgg 12591727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 22576064 - 22576113
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  22576064 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 22576113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 28672064 - 28672113
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||    
T  28672064 ccatttggggttggcctagtggttgacttgagatcttggagtttgctcct 28672113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 3222834 - 3222742
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttca-aattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  |||||  ||||||||||  ||| |  |||| |||||||||||| | ||||||||||||||||||    
T  3222834 ccatttggggttggcctagtggttggcttgggatcttgcagtttgctcc--tcagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 3222742  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 9843933 - 9843984
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||||  ||||||||||||||  ||||| ||||||||||||    
T  9843933 atccatttggggttggtctagtggttggcttgggatcttggagtttgctcct 9843984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 10377714 - 10377820
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaatt 271  Q
    |||||||||||||  ||| |||||||||| ||||| |||| ||||| | ||||  |||| ||||| ||||||   |||||||||||||||||| ||| |     
T  10377714 atttggggttggcccagttgttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttcaattccc-tatggtgccaatttcggtgggcaagtc 10377812  T
Q  272 catacata 279  Q
    ||||||||    
T  10377813 catacata 10377820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 264
Target Start/End: Original strand, 11448871 - 11448961
Alignment:
Q  173 tttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||| | | ||||||||||||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctc-tggtgccaatttcggtgg 11448961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 8260556 - 8260486
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcc 242  Q
    |||||||||||||||||||||||  ||  ||||||||||||||| ||||| ||  |||| | |||||||||    
T  8260556 atttggggttggcttagtggttgagtttgaatcttagagtttgccccttttaaggtctcagcttcgattcc 8260486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 13753237 - 13753286
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| |||||||||||||   ||||| ||||||||||||    
T  13753237 ccatttggggttggcctagtggttggctttggatcttggagtttgctcct 13753286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 21982520 - 21982471
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  |||||  |||||||||||    
T  21982520 ccatttggggttggcctagtggttggcttgggatcttgaagtttgctcct 21982471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 25852211 - 25852304
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  25852211 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 25852304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 13873495 - 13873404
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggt 262  Q
    ||||||||||||||| |||||||| |||||  ||||| |||||||||||||  ||  |||| |||||||||||| | ||||||||||||||||    
T  13873495 ccatttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccctc-tggtgccaatttcggt 13873404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 277
Target Start/End: Complemental strand, 41621796 - 41621690
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaa 269  Q
    ||||||||||||||| || |||||||||||| ||||| |||||||||||| ||||  ||||  ||| |||| || | |||||||||||| ||||| ||||    
T  41621796 ccatttggggttggcctaatggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctc-tggtgccaattttggtgggcaaa 41621698  T
Q  270 ttcataca 277  Q
    | ||||||    
T  41621697 tccataca 41621690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 27528995 - 27528902
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||| |||||||||||||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  27528995 ccatctggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 27528902  T

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Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 40059052 - 40058959
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| |||||||||||| |  |  |||| |||||||||| | | ||||||||||||||||||    
T  40059052 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctc-tggtgccaatttcggtgg 40058959  T

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Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 46714389 - 46714483
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||||||| ||  |||||||||||||||||||    
T  46714389 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgg 46714483  T

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Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 52983616 - 52983709
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||| ||||    
T  52983616 ccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcagtgg 52983709  T

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Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 54127542 - 54127449
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| ||||| |||||| ||| ||||||||||||||||    
T  54127542 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctctt-gtgccaatttcggtgg 54127449  T

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Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 317
Target Start/End: Original strand, 20566344 - 20566494
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaa--ttctctggttcgattcccacttggtgccaatttcggtgga 265  Q
    ||||||||||||||||| ||||||||||||||  ||||| ||||||||||| | || |  |  || |||||||||||| | ||||||||||||||||||     
T  20566344 atccatttggggttggcctagtggttggcttgggatcttggagtttgctcc-tccagaggtgatcaggttcgattccctc-tggtgccaatttcggtggg 20566441  T
Q  266 caaa-ttcatacataacttgctatggcttagaacagagccctcgtaagtgggc 317  Q
    |||| | |||||| | |||||| ||||||  ||| |||||| || ||||||||    
T  20566442 caaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggc 20566494  T

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Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 34835527 - 34835619
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||  ||||||||||||||  |||||||||||||||||| | ||  ||||  ||||||||||| | ||||| ||||||||||||    
T  34835527 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctc-tggtgtcaatttcggtgg 34835619  T

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Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 42245744 - 42245816
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattccc 243  Q
    |||||||||||||| ||||||||| ||||  |||||||||||||||||| | ||  |||| ||||||||||||    
T  42245744 catttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccc 42245816  T

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Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 34722169 - 34722216
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  34722169 atttggggttggcttagtggttggcttgggatcttggagtttgctcct 34722216  T

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Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 32986194 - 32986287
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||| |||||| | ||||||||||||||||||    
T  32986194 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctc-tggtgccaatttcggtgg 32986287  T

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Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 34844958 - 34844865
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| |||||||| |||||| ||||| ||||||||||||    |  |||| |||||||||| | | ||||||||||||||||||    
T  34844958 ccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattctctc-tggtgccaatttcggtgg 34844865  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 5609402 - 5609355
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctc 217  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||    
T  5609402 ccatttggggttggcctagtggttggcttgggatcttggagtttgctc 5609355  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 33696479 - 33696386
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||| |||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||| |||||| | ||||||||||||||||||    
T  33696479 ccatttagggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctc-tggtgccaatttcggtgg 33696386  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 1985833 - 1985882
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||| ||||| ||||||||||||||  ||||| ||||||||||||    
T  1985833 ccatttgggattggcctagtggttggcttgggatcttggagtttgctcct 1985882  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 3089511 - 3089454
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattc 228  Q
    ||||||||||||| ||| ||||||  |||||||||| |||| ||||||| ||||||||    
T  3089511 catttggggttggtttaatggttgatttgaaatcttggagtgtgctcctctcaaattc 3089454  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 19660732 - 19660683
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    |||||||| |||||| ||||||||||||||  ||||| ||||||||||||    
T  19660732 ccatttggagttggcctagtggttggcttgggatcttggagtttgctcct 19660683  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 55287800 - 55287850
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctt 220  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  55287800 ccatttggggttggcatagtggttggcttggaatcttagagtttgctcctt 55287850  T

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Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 30257621 - 30257716
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac 266  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||   ||  |||| ||||||||||||  ||||||||||||||| |||||    
T  30257621 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc-tttggtgccaatttcgatggac 30257716  T

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Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 8456350 - 8456257
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  8456350 ccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 8456257  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 30807353 - 30807260
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  30807353 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 30807260  T

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Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 35492908 - 35493001
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||    
T  35492908 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 35493001  T

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Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 53424376 - 53424283
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| ||||||||||||  |||||||||||||||||||    
T  53424376 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc-tttggtgccaatttcggtgg 53424283  T

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Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 4252596 - 4252508
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttc 259  Q
    ||||||||||||||| ||||||||||||||| ||||| |||| ||||||| ||||  ||||  ||| ||||||| | |||||||||||||    
T  4252596 ccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctc-tggtgccaatttc 4252508  T

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Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 4462631 - 4462703
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattccc 243  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||| |||  ||| ||||  |||||||||||    
T  4462631 catttggggttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccc 4462703  T

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Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 40940822 - 40940917
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac 266  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||||||||||    
T  40940822 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcggtggac 40940917  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 7485725 - 7485632
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||   ||  |||| |||||||||||| | || |||||||||||||||    
T  7485725 ccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctc-tgatgccaatttcggtgg 7485632  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 40133649 - 40133556
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  || || ||||||||||||   ||  |||| |||||||||||| | ||||| ||||||||||||    
T  40133649 ccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctc-tggtgtcaatttcggtgg 40133556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 46576345 - 46576438
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||||||||||||| ||||    
T  46576345 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggtgccaatttcagtgg 46576438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 48977385 - 48977478
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||   ||  |||| |||||||||||  | ||||||||||||||||||    
T  48977385 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttc-tggtgccaatttcggtgg 48977478  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 51391023 - 51390942
Alignment:
Q  186 tagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaa 268  Q
    ||||||||||||||| |||||||||||||||||| ||||  ||||   ||| |||||| ||| |||||||||||||| |||||    
T  51391023 tagtggttggcttgagatcttagagtttgctcctctcaagatctcaatttcaattccctctt-gtgccaatttcggtagacaa 51390942  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 18177087 - 18176992
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttca-aattctctggttcgattcccacttggtgccaatttcggtggac 266  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||| ||| || |  | || |||||||||||| | ||||||||||||||||||||    
T  18177087 ccatttggggttggcctagtggttgacttgagatcttggagtttgct-cttccagaggtatcaggttcgattccctc-tggtgccaatttcggtggac 18176992  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 34492775 - 34492726
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  34492775 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 34492726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 45529954 - 45529905
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  45529954 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 45529905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 7470415 - 7470292
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggac-aa 268  Q
    |||||||||||| || ||||||||| ||||| ||||| ||||||||||||   ||  |||| |||||||||||| | |  ||||||||||||||| | ||    
T  7470415 ccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctc-taatgccaatttcggtgggctaa 7470317  T
Q  269 attcatacataacttgctatggctt 293  Q
     |||||||| | |||||| ||||||    
T  7470316 gttcatacagagcttgctctggctt 7470292  T

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Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 15566692 - 15566606
Alignment:
Q  177 gggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||    |  |||| |||||||||||| | | ||||||||||||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctc-tagtgccaatttcggtgg 15566606  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 25344259 - 25344208
Alignment:
Q  168 atccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  25344259 atccatttggggttggcctagtggttgacttgggatcttcgagtttgctcct 25344208  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 25379760 - 25379807
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctcct 25379807  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 45272616 - 45272523
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaat-tctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| |||| |||||||||  ||||| ||||||||||| | || || |||| | |||||||||| | ||||||||||||||||||    
T  45272616 ccatttggggttggcctagtcgttggcttgggatcttggagtttgctcc-tccagatgtctcagtttcgattccctc-tggtgccaatttcggtgg 45272523  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 55371483 - 55371381
Alignment:
Q  172 atttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtggacaaatt 271  Q
    ||||| ||||||| ||||||||||||||  || || |||| |||| || ||||  ||||  |||||||||||  |||||||||||||||| |||||| ||    
T  55371483 atttgaggttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccct-ttggtgccaatttcggcggacaagtt 55371385  T
Q  272 cata 275  Q
    ||||    
T  55371384 cata 55371381  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 25289914 - 25289821
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||  ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | | ||||||||||||||||    
T  25289914 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tagtgccaatttcggtgg 25289821  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 6041871 - 6041818
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaa 224  Q
    |||||||||||| | || |||||| ||||||||||| |||||||||||| ||||    
T  6041871 catttggggttgccctaatggttgacttgaaatcttggagtttgctcctctcaa 6041818  T

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Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 21362940 - 21362989
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  21362940 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcct 21362989  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 26158816 - 26158908
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||| ||   |||||||||| ||||| |||| ||||||| ||||  |||| ||||  ||||||  |||||||||||||||||||    
T  26158816 catttggggttggcctatgtgttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccc-tttggtgccaatttcggtgg 26158908  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 31538038 - 31537989
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| |||||||||||||   ||||| ||||||||||||    
T  31538038 ccatttggggttggcctagtggttggcttaggatcttggagtttgctcct 31537989  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 50582989 - 50583038
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| |||||||||| |||  ||||| ||||||||||||    
T  50582989 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcct 50583038  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 52455849 - 52455800
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| |||||||||||| |  ||||| ||||||||||||    
T  52455849 ccatttggggttggcctagtggttggctagggatcttggagtttgctcct 52455800  T

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Target: scaffold0070 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 40322 - 40415
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| |||||||||||||   ||||| |||||||||||||   |  |||| |||||||||||| | ||||||||||||||||||    
T  40322 ccatttggggttggcctagtggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccctc-tggtgccaatttcggtgg 40415  T

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Target: scaffold0026 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 97566 - 97473
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    ||||||||||||||| ||||||||||||||  |||||  |||||||||||   ||  |||| |||||||||||| | ||||||||||||||||||    
T  97566 ccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctc-tggtgccaatttcggtgg 97473  T

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Target: scaffold0623 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 264
Target Start/End: Complemental strand, 1255 - 1163
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  1255 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 1163  T

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Target: scaffold0366 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 264
Target Start/End: Complemental strand, 9498 - 9406
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgg 264  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    |  |||| |||||||||||| | ||| ||||||||||||||    
T  9498 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctc-tggagccaatttcggtgg 9406  T

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Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 12199 - 12151
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  12199 catttggggttggcctagtggttggcttgggatcttggagtttgctcct 12151  T

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Target: scaffold0199 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 8607 - 8558
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  8607 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 8558  T

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Target: scaffold0459 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 10892 - 10844
Alignment:
Q  171 catttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||||||||    
T  10892 catttggggttggcctagtggttggcttgggatcttggagtttgctcct 10844  T

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Target: scaffold0460 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 8379 - 8285
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattcccacttggtgccaatttcggtgga 265  Q
    |||||||||||||| ||||||||||||| |  ||||| ||||||||||||    |  ||||  ||||||||||| | |||||||||||||||||||    
T  8379 ccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccctc-tggtgccaatttcggtgga 8285  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 14988 - 15037
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||||| ||  ||||| ||||||||||||    
T  14988 ccatttggggttggcctagtggttggcctgggatcttggagtttgctcct 15037  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 41844 - 41795
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||||||||| ||||||||| ||||  ||||| ||||||||||||    
T  41844 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcct 41795  T

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Target: scaffold0051 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 53071 - 53022
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcct 219  Q
    ||||||||| ||||| ||||||||||||||  ||||| ||||||||||||    
T  53071 ccatttgggattggcctagtggttggcttgggatcttggagtttgctcct 53022  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 27773 - 27846
Alignment:
Q  170 ccatttggggttggcttagtggttggcttgaaatcttagagtttgctcctttcaaattctctggttcgattccc 243  Q
    ||||||||||||||  |||||||||| |||  || || |||||||||||| ||||  |||| ||||||||||||    
T  27773 ccatttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccc 27846  T

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