View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13728_high_4 (Length: 390)
Name: NF13728_high_4
Description: NF13728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13728_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 77 - 374
Target Start/End: Complemental strand, 122041 - 121744
Alignment:
| Q |
77 |
gtataatcgctaacaaaattttataatggaaaacaaatataaaaagttgtataactctactacaaaatcaattaactgtgaggctccacagtagatgttc |
176 |
Q |
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| T |
122041 |
gtataatcgctaacaaaattttataatggaaaacaaatataaaaagttgtataactctactacaaaatcaattaactgtgaggctccacagtagatgttc |
121942 |
T |
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| Q |
177 |
taatatgttgtataatctagcacctactacatcatctgcctaaaatcaggtcccatatgttggtgaatcaagtaatcatcattattggacatatcaaaca |
276 |
Q |
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| T |
121941 |
taatatgttgtataatctagcacctactacatcatctgcctaaaatcaggtcccatatgttggtgaatcaagtaatcatcattattggacatatcaaaca |
121842 |
T |
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| Q |
277 |
tcatactctgatgttgtaaaatctggctttgttggtgttggtgtgcccgcaacatttccttctgcctccgtagctccaatactttacgatgcgagttg |
374 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
121841 |
tcatactctgatgttgtaaaatctggttttgttggtgttggtgtgcccgcaacatttccttctgcctccgtagctccaatactttacgatgcgagttg |
121744 |
T |
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