View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13728_low_12 (Length: 247)
Name: NF13728_low_12
Description: NF13728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13728_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 30 - 226
Target Start/End: Complemental strand, 9055856 - 9055664
Alignment:
| Q |
30 |
catcattaacccttcaaacctcaaaaatcaaacacannnnnnnnnnnnnngttcggtgttgttcagnnnnnnngtatcaaacactttctctctctatctt |
129 |
Q |
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| T |
9055856 |
catcattaacccttcaaacctcaaaaatcaaacacactctctctct----gttcggtgttgttcagaaaaaaagtatcaaacactttctctctctatctt |
9055761 |
T |
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| Q |
130 |
tttcatctttttgttcaaccatgaagaagctctaccataaagcgacggttcatccatcaccaccggtgataaccgaccaactttccttccttccggc |
226 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9055760 |
tttcatctttttgttcaaccatgaagaagctctaccataaagcgacggttcatccatcaccaccggtgataaccgaccaactttccttccttccggc |
9055664 |
T |
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