View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13729_high_8 (Length: 296)
Name: NF13729_high_8
Description: NF13729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13729_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 37 - 296
Target Start/End: Original strand, 35519930 - 35520198
Alignment:
| Q |
37 |
aaagcgacaaaagagacaaaattgacaaccggattcaaattctgttagttatgtttggattgccgtgaattgacaatcacgataagtcattgcaatttta |
136 |
Q |
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| T |
35519930 |
aaagcgacaaaagagacaaaattgacaaccggattcaaattctgttagttatgtttggattgccgtgaattgacaatcacgataagtcattgcaatttta |
35520029 |
T |
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| Q |
137 |
actaaagttacaagattgataaactcacgac---------taatatacactaagttgaatttattagttgagagactattgatggtgaccaatctgctca |
227 |
Q |
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| T |
35520030 |
actaaagttacaagattgataaactcacgactaatataaataatatacactaagttgaatttattagttgagagactattgatggtgaccaatctgctca |
35520129 |
T |
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| Q |
228 |
agatcaacattcgtaagatttttatgtattatattttaatcaatcaggttagttagccttgtggctact |
296 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
35520130 |
agatcaacattcgtaagatttttatgtcttatattttaatcaatcaggttagttagccttgtggctact |
35520198 |
T |
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