View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1372_low_13 (Length: 369)
Name: NF1372_low_13
Description: NF1372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1372_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 15 - 341
Target Start/End: Complemental strand, 3464041 - 3463715
Alignment:
| Q |
15 |
tataaggtatgcaagtttgaatcaaccagcatgtaaatttcatagtactagcatctaacatacccttaataatccgactatggaccagtactcgaaaatt |
114 |
Q |
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| T |
3464041 |
tataaggtatgcaagtttgaatcaaccagcatgtaaatttcatagtactagcatctaacatacccttaataatccgactatggaccagtactcgaaaatt |
3463942 |
T |
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| Q |
115 |
gtttgaaaatctaaccacgacagacaaacattgtcttttgagattagaagtggatgacacaattattgattgaagcataccacttttgaaattttcaggt |
214 |
Q |
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| T |
3463941 |
gttcgaaaatctaaccacgacagacaaacattgtcttttgagattagaagtggatgacacaattattgattgaagcataccacttttgaaattttcaggt |
3463842 |
T |
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| Q |
215 |
ctataatctgtgtatagaagaacattatgatccagcacagttctatggtcgtgtggaagaatacccttttgatgacaatcatgttccatctcttgaaatg |
314 |
Q |
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| T |
3463841 |
ctataatctgtgtatagaagaacattatgatccagcacagttctatggtcgtgtggaagaatacccttttgatgacaatcatgttccatctcttgaaatg |
3463742 |
T |
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| Q |
315 |
attaaagatttctgcgaaagtgtgaat |
341 |
Q |
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| T |
3463741 |
attaaagatttctgcgaaagtgtgaat |
3463715 |
T |
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