View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1372_low_34 (Length: 251)
Name: NF1372_low_34
Description: NF1372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1372_low_34 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 3464455 - 3464217
Alignment:
| Q |
13 |
aatataagtttttgacatttcacaattttgaagagaaaagaaactatatatgttgctaaccttttactacatgtgattatttttgtgataggtaccttat |
112 |
Q |
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| T |
3464455 |
aatataagtttttgacatttcacaattttgaagagaaaagaaactatatatgttgctaaccttttactacatgtgattatttttgtgataggtaccttat |
3464356 |
T |
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| Q |
113 |
tgtcagtgtggaacctggcatatcaacctgaaatggggttgaaattaacaaagcagggttcaccacccaaaattagtagtccagcaagtttgcaattaca |
212 |
Q |
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| T |
3464355 |
tgtcagtgtggaacctggcatatcaacctgaaatggggttgaaattaacaaagcagggttcaccacccaaaattagtagtccagcaagtttgcaattaca |
3464256 |
T |
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| Q |
213 |
tgaaagaatgattcattaccttaccaagaattttatccg |
251 |
Q |
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| T |
3464255 |
tgaaagaatgattcattaccttaccaagaattttatccg |
3464217 |
T |
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