View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1372_low_36 (Length: 242)

Name: NF1372_low_36
Description: NF1372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1372_low_36
NF1372_low_36
[»] scaffold0188 (1 HSPs)
scaffold0188 (20-216)||(6805-7001)
[»] chr4 (40 HSPs)
chr4 (136-216)||(49175907-49175987)
chr4 (133-216)||(2653488-2653569)
chr4 (149-216)||(16821317-16821384)
chr4 (133-216)||(32469918-32470001)
chr4 (133-209)||(462033-462109)
chr4 (149-216)||(7061650-7061717)
chr4 (133-216)||(36985854-36985937)
chr4 (164-214)||(26885504-26885554)
chr4 (149-215)||(47464351-47464417)
chr4 (133-212)||(8175550-8175629)
chr4 (133-216)||(18532247-18532330)
chr4 (133-212)||(35251961-35252040)
chr4 (133-212)||(41711426-41711505)
chr4 (149-212)||(42616889-42616952)
chr4 (157-215)||(6643654-6643712)
chr4 (149-215)||(32884870-32884936)
chr4 (157-215)||(34360724-34360782)
chr4 (149-215)||(40122840-40122906)
chr4 (149-215)||(43237312-43237378)
chr4 (149-219)||(49428328-49428398)
chr4 (157-215)||(51625152-51625210)
chr4 (137-198)||(3669965-3670026)
chr4 (149-202)||(4972642-4972695)
chr4 (150-215)||(17237283-17237348)
chr4 (135-216)||(27880214-27880294)
chr4 (135-212)||(30192277-30192354)
chr4 (135-216)||(53412176-53412257)
chr4 (157-212)||(28500885-28500940)
chr4 (149-212)||(35311209-35311272)
chr4 (149-212)||(38405088-38405151)
chr4 (149-212)||(46396869-46396932)
chr4 (138-216)||(2066857-2066935)
chr4 (149-215)||(2942631-2942697)
chr4 (147-213)||(44536180-44536246)
chr4 (157-219)||(47358943-47359005)
chr4 (167-216)||(2158004-2158053)
chr4 (133-214)||(33790701-33790782)
chr4 (182-215)||(49747030-49747063)
chr4 (133-216)||(6609829-6609913)
chr4 (157-212)||(49579172-49579228)
[»] chr5 (24 HSPs)
chr5 (133-212)||(32440213-32440292)
chr5 (133-216)||(38508149-38508232)
chr5 (146-214)||(8698379-8698447)
chr5 (133-212)||(843509-843588)
chr5 (149-216)||(9515814-9515881)
chr5 (151-216)||(15439299-15439364)
chr5 (148-212)||(8724986-8725050)
chr5 (149-212)||(27542867-27542930)
chr5 (149-212)||(29570464-29570527)
chr5 (149-215)||(2232051-2232117)
chr5 (178-216)||(3076658-3076696)
chr5 (149-215)||(4818620-4818686)
chr5 (149-215)||(15818458-15818524)
chr5 (149-215)||(40530202-40530268)
chr5 (149-198)||(42922845-42922894)
chr5 (136-212)||(37184044-37184120)
chr5 (149-212)||(1248582-1248645)
chr5 (149-216)||(7827904-7827971)
chr5 (161-212)||(30512675-30512726)
chr5 (161-212)||(30553015-30553066)
chr5 (133-214)||(41478897-41478978)
chr5 (132-212)||(11796128-11796208)
chr5 (149-212)||(29856119-29856180)
chr5 (138-214)||(41492372-41492448)
[»] chr3 (31 HSPs)
chr3 (149-212)||(1778714-1778777)
chr3 (137-216)||(12736540-12736619)
chr3 (137-215)||(14194624-14194702)
chr3 (133-226)||(38795402-38795495)
chr3 (133-210)||(40462386-40462463)
chr3 (133-216)||(10366606-10366689)
chr3 (149-215)||(8679034-8679100)
chr3 (149-215)||(43253843-43253909)
chr3 (149-209)||(30861470-30861529)
chr3 (149-212)||(37772944-37773007)
chr3 (149-215)||(37312019-37312085)
chr3 (150-212)||(51837940-51838002)
chr3 (133-212)||(37695629-37695709)
chr3 (133-212)||(19609371-19609450)
chr3 (145-216)||(19823079-19823150)
chr3 (149-216)||(30190640-30190707)
chr3 (133-216)||(44301630-44301713)
chr3 (149-211)||(33491063-33491125)
chr3 (151-212)||(24569082-24569143)
chr3 (149-214)||(27471405-27471470)
chr3 (147-212)||(28690760-28690825)
chr3 (150-215)||(50035198-50035263)
chr3 (149-216)||(37497560-37497627)
chr3 (137-212)||(45811727-45811802)
chr3 (150-216)||(34750564-34750630)
chr3 (171-212)||(7757599-7757640)
chr3 (150-215)||(11632150-11632214)
chr3 (147-212)||(19611980-19612045)
chr3 (145-212)||(5322915-5322980)
chr3 (171-215)||(23004384-23004428)
chr3 (168-216)||(30682065-30682113)
[»] chr1 (26 HSPs)
chr1 (133-216)||(6160426-6160509)
chr1 (150-216)||(31042865-31042931)
chr1 (150-215)||(28749060-28749125)
chr1 (133-216)||(6267823-6267906)
chr1 (149-215)||(12039151-12039217)
chr1 (132-212)||(26093466-26093546)
chr1 (133-212)||(11449955-11450034)
chr1 (157-219)||(27897020-27897082)
chr1 (157-215)||(39864180-39864238)
chr1 (133-216)||(3260654-3260738)
chr1 (148-212)||(34031509-34031573)
chr1 (149-212)||(9307699-9307762)
chr1 (149-216)||(12151244-12151311)
chr1 (157-216)||(35682796-35682855)
chr1 (135-216)||(3312179-3312260)
chr1 (178-223)||(31154189-31154234)
chr1 (168-216)||(36701989-36702037)
chr1 (168-216)||(36718093-36718141)
chr1 (149-212)||(24991636-24991699)
chr1 (133-212)||(32970534-32970613)
chr1 (157-215)||(23168984-23169042)
chr1 (149-211)||(30754924-30754986)
chr1 (180-217)||(17988572-17988609)
chr1 (133-182)||(24499962-24500011)
chr1 (178-215)||(44707772-44707809)
chr1 (171-215)||(37506196-37506240)
[»] chr8 (31 HSPs)
chr8 (149-214)||(21216082-21216147)
chr8 (132-215)||(7172983-7173066)
chr8 (149-216)||(39405830-39405897)
chr8 (149-215)||(1875573-1875639)
chr8 (133-216)||(27294024-27294107)
chr8 (149-215)||(39482684-39482750)
chr8 (150-212)||(42972490-42972552)
chr8 (167-216)||(9839825-9839874)
chr8 (145-214)||(31082689-31082758)
chr8 (133-216)||(51181-51263)
chr8 (149-219)||(10179928-10179998)
chr8 (145-215)||(29226208-29226278)
chr8 (150-211)||(39329370-39329430)
chr8 (152-215)||(1739709-1739772)
chr8 (133-212)||(4428317-4428395)
chr8 (133-216)||(17719223-17719306)
chr8 (149-216)||(17823989-17824055)
chr8 (133-212)||(32476359-32476438)
chr8 (149-216)||(34948668-34948735)
chr8 (149-212)||(45425647-45425710)
chr8 (158-212)||(5356671-5356725)
chr8 (149-203)||(11976917-11976971)
chr8 (170-212)||(31331480-31331522)
chr8 (138-212)||(36967433-36967507)
chr8 (150-216)||(39329087-39329153)
chr8 (133-174)||(35732327-35732368)
chr8 (158-219)||(40109799-40109860)
chr8 (178-215)||(44761504-44761541)
chr8 (140-212)||(7703128-7703200)
chr8 (171-219)||(34393957-34394005)
chr8 (167-211)||(34455684-34455728)
[»] scaffold0095 (1 HSPs)
scaffold0095 (149-216)||(50272-50339)
[»] scaffold0294 (1 HSPs)
scaffold0294 (149-215)||(17104-17170)
[»] chr6 (11 HSPs)
chr6 (149-215)||(31894189-31894255)
chr6 (133-212)||(7920310-7920389)
chr6 (167-216)||(1063600-1063649)
chr6 (149-211)||(3720220-3720282)
chr6 (157-214)||(13909494-13909551)
chr6 (133-216)||(3291731-3291814)
chr6 (137-216)||(15582351-15582430)
chr6 (157-216)||(21804516-21804575)
chr6 (133-216)||(32440608-32440691)
chr6 (182-216)||(16406798-16406832)
chr6 (138-216)||(28101327-28101405)
[»] chr2 (22 HSPs)
chr2 (157-215)||(8947038-8947096)
chr2 (135-207)||(18853164-18853236)
chr2 (149-212)||(19937749-19937812)
chr2 (149-212)||(39691562-39691625)
chr2 (133-212)||(45235653-45235732)
chr2 (149-211)||(17695403-17695465)
chr2 (157-208)||(15435447-15435498)
chr2 (149-212)||(16377634-16377697)
chr2 (149-216)||(27501516-27501583)
chr2 (133-216)||(36794352-36794435)
chr2 (149-211)||(26607946-26608008)
chr2 (161-215)||(35313956-35314010)
chr2 (150-214)||(5789627-5789691)
chr2 (149-213)||(31448671-31448735)
chr2 (133-216)||(16463757-16463840)
chr2 (149-216)||(16805949-16806016)
chr2 (149-216)||(16845230-16845297)
chr2 (157-212)||(43410498-43410553)
chr2 (149-215)||(3323264-3323330)
chr2 (157-215)||(43115788-43115846)
chr2 (133-214)||(25637551-25637631)
chr2 (179-216)||(41220954-41220991)
[»] scaffold0302 (1 HSPs)
scaffold0302 (149-212)||(16170-16233)
[»] chr7 (24 HSPs)
chr7 (157-212)||(2850876-2850931)
chr7 (133-212)||(16904458-16904537)
chr7 (149-212)||(26974108-26974171)
chr7 (133-212)||(34947579-34947658)
chr7 (149-215)||(7463289-7463355)
chr7 (149-215)||(8592427-8592493)
chr7 (133-219)||(44180277-44180363)
chr7 (149-213)||(28103811-28103875)
chr7 (149-216)||(21759971-21760038)
chr7 (157-215)||(5524456-5524514)
chr7 (145-215)||(34100530-34100600)
chr7 (157-214)||(2459546-2459603)
chr7 (150-215)||(12631381-12631446)
chr7 (166-215)||(33819290-33819339)
chr7 (133-216)||(83460-83543)
chr7 (145-212)||(3178187-3178254)
chr7 (133-212)||(9786067-9786146)
chr7 (149-216)||(22738776-22738843)
chr7 (149-215)||(11373415-11373481)
chr7 (150-212)||(13962038-13962100)
chr7 (145-223)||(32346035-32346113)
chr7 (178-215)||(24516305-24516342)
chr7 (178-214)||(19271749-19271785)
chr7 (151-215)||(41506054-41506118)
[»] scaffold0583 (1 HSPs)
scaffold0583 (133-212)||(2097-2176)
[»] scaffold0464 (1 HSPs)
scaffold0464 (157-216)||(6273-6332)
[»] scaffold0012 (1 HSPs)
scaffold0012 (149-212)||(105756-105819)
[»] scaffold0159 (1 HSPs)
scaffold0159 (150-214)||(34000-34064)


Alignment Details
Target: scaffold0188 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 7001 - 6805
Alignment:
Q  20 acttactgctctccctcttatatgagaaattaacgagatgattcaaagtaatatattcatctttattagtttttaggggaaattacaccgaacttcttaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7001 acttactgctctccctcttatatgagaaattaacgagatgattcaaagtaatatattcatctttattagttttaaggggaaattacaccgaacttcttaa 6902  T
Q  120 attactcatttgctctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  6901 attactcatttgctctcaaaataacagttgtttaaggtttgtgcgtgatttttaaggaaatgattaattgttttaatttcaatgataaaattagtat 6805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 49175907 - 49175987
Alignment:
Q  136 caaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||| ||| ||||||| |||||||||||||||||||  |||||||||||||   |||||||||||||||||||||||    
T  49175907 caaaataatagtcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattagtat 49175987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 2653569 - 2653488
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||||||||||||||||||||||||| ||||   ||||||||||||| |||||||||||  ||||||||||||    
T  2653569 tctctaaataatagttgtttaagatttgtgcatgattattaa--aaatgattaattgtgttgatttcaattgtaaaattagtat 2653488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 16821317 - 16821384
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||||| |||| |||| | ||||||||||||| |||||||||||||||||||||||||    
T  16821317 gtttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatgataaaattagtat 16821384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 32469918 - 32470001
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| | ||||||||||||| ||||| ||||| |||  ||||||||||||| ||||||| |||| ||||||||||||    
T  32469918 tctcaaaataatatttgtttaagatttatgcataattttaaagaaaatgattaattgtgttgattttaatggtaaaattagtat 32470001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 462109 - 462033
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaa 209  Q
    |||| |||||| |||  |||||||||||||||| |||||||||  ||||||||||||| |||||||||||| |||||    
T  462109 tctcgaaataatagtaatttaagatttgtgcataatttttaagaaaatgattaattgtattgatttcaatggtaaaa 462033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 7061650 - 7061717
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| ||||| || |||| |||||| ||||||||||||| |||||||||||| ||||||||||||    
T  7061650 gtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtat 7061717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 36985937 - 36985854
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| | | ||||||||||| |  | ||||||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  36985937 tctcaaaataatactcgtttaagatttttatacgatttttcaggaaatgattaattgtgttgatttcaatggtaaaattagtat 36985854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 26885554 - 26885504
Alignment:
Q  164 atgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  26885554 atgatttttaatgaaatgattaattgtattgatttcaatgataaaattagt 26885504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 47464351 - 47464417
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||| ||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  47464351 gtttaaggtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 47464417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 8175550 - 8175629
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| ||||||||| |  |||||||||||| ||||   ||||| ||||||| |||||||||||| ||||||||    
T  8175550 tctcaaaataatagttgtttatggcttgtgcatgattattaaaaaaatgaataattgtgttgatttcaatggtaaaatta 8175629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 18532330 - 18532247
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| ||||||||||| |||||||||||||||||    ||||||||||| | |  |||| |||| ||||||||||||    
T  18532330 tctcaaaataatagttgtttaaggtttgtgcatgatttttacataaatgattaattatataaattttaatggtaaaattagtat 18532247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 35252040 - 35251961
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||| | ||| |||| |||||||||||||||||| |||  ||| |||||||||  | ||||||||||||||||||    
T  35252040 tctcaaaattatagtcgtttgagatttgtgcatgattttcaagaaaataattaattgtggttatttcaatgataaaatta 35251961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 41711426 - 41711505
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||| || ||||||||||| ||||||||  ||||||| || ||||||||||| | ||||||| |||| ||||||||    
T  41711426 tctcaaaacaatagttgtttaaggtttgtgcacaatttttatggaaatgattaattatgttgattttaatggtaaaatta 41711505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 42616889 - 42616952
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| ||||||||||||| |||| | ||||||||| ||| |||||||||||| ||||||||    
T  42616889 gtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaatta 42616952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 6643654 - 6643712
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||| ||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  6643654 tttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 6643712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 32884936 - 32884870
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||||| |||| |||||  ||||||||||||| |||||||||||| || ||||||||    
T  32884936 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagta 32884870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 34360782 - 34360724
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||| |||| |||| | ||||||||||||| |||||||||||| |||||||||||    
T  34360782 tttgtgcacgattattaaagaaatgattaattgtattgatttcaatggtaaaattagta 34360724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 40122840 - 40122906
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||||| |||| |||||| ||||||||||||  ||||||| |||| |||||||||||    
T  40122840 gtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagta 40122906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 43237378 - 43237312
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| ||| |||| |||| |||||| ||||||||||||| || ||||||||| |||||||||||    
T  43237378 gtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagta 43237312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 49428328 - 49428398
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtataat 219  Q
    ||||||| ||| |||| |||| |||||| |||||||| |||| |||||||||||| |||||||| ||||||    
T  49428328 gtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaattaatataat 49428398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 51625210 - 51625152
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||| |||| |||||  ||||||||||||| |||||||||||| |||||||||||    
T  51625210 tttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 51625152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 3670026 - 3669965
Alignment:
Q  137 aaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgattt 198  Q
    ||||||| ||| ||||||||||| ||||||||||||||   ||||||||||||| |||||||    
T  3670026 aaaataatagtcgtttaagatttatgcatgatttttaaaaaaatgattaattgtgttgattt 3669965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 4972695 - 4972642
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaat 202  Q
    |||||||||||||||| |||| |||| | ||||||||||||| |||||||||||    
T  4972695 gtttaagatttgtgcacgattattaatgaaatgattaattgtgttgatttcaat 4972642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 17237283 - 17237348
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||| ||||||||||||| |||||  ||| ||||||||| |||||| ||||| |||||||||||    
T  17237283 tttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagta 17237348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 27880214 - 27880294
Alignment:
Q  135 tcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||| ||| ||||||| |||||  |||||||||||   |||||||| |||| |||||||||||| ||||||||||||    
T  27880214 tcaaaataatagtcgtttaaggtttgtatatgatttttaaataaatgatta-ttgtgttgatttcaatggtaaaattagtat 27880294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 30192354 - 30192277
Alignment:
Q  135 tcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||||  | |||||||  ||||| || ||||||||||  ||||||||||||| ||||||||||| |||||||||    
T  30192354 tcaaaataatcgctgtttaatgtttgtacacgatttttaagaaaatgattaattgtgttgatttcaattataaaatta 30192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 53412257 - 53412176
Alignment:
Q  135 tcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||| ||||||||| |||||  | | ||||||||||  || |||||||| | |||||||||||| ||||||||||||    
T  53412257 tcaaaataatagttgtttacgatttacgtacgatttttaagaaaacgattaattttattgatttcaatggtaaaattagtat 53412176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 28500885 - 28500940
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||| |||| |||||| ||||||| ||||| |||||||||||| ||||||||    
T  28500885 tttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 28500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 35311209 - 35311272
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| |||||||| |||| |||||| ||||||||||| | || ||||||||| ||||||||    
T  35311209 gtttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggtaaaatta 35311272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 38405088 - 38405151
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| |||||||| |||| |||||| ||||||||||| | ||||||| |||| ||||||||    
T  38405088 gtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaatta 38405151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 46396869 - 46396932
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| |||||||| |||  |||||  ||||||||||||| |||||||||||| ||||||||    
T  46396869 gtttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggtaaaatta 46396932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 2066935 - 2066857
Alignment:
Q  138 aaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||| ||| ||||||| ||| |||| |||| |||||| ||||||||||||| |||||||  ||| |||| |||||||    
T  2066935 aaataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagtat 2066857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 2942631 - 2942697
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||  | |||| |||| | ||||||||||||| |||||||| |||||||||||||||    
T  2942631 gtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttcgatgataaaattagta 2942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 44536180 - 44536246
Alignment:
Q  147 ttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattag 213  Q
    ||||||||  ||| |||| |||| |||||| ||||||||||||| ||||||| |||| |||||||||    
T  44536180 ttgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggtaaaattag 44536246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 47358943 - 47359005
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtataat 219  Q
    |||||||||||| | ||||  ||| ||| ||||| |||||||||||||||||||||| |||||    
T  47358943 tttgtgcatgatgtctaagaaaattattgattgtgttgatttcaatgataaaattagaataat 47359005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 2158004 - 2158053
Alignment:
Q  167 atttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||| | || |||||||||  |||||||||||||||||||||||||    
T  2158004 atttttaatgaaacgattaattgaattgatttcaatgataaaattagtat 2158053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 33790701 - 33790782
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||| |||||| ||| ||||||| ||| |||| |||| |||||  ||||||||||||| |||||||  ||| ||||||||||    
T  33790701 tctctaaataatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 33790782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 49747063 - 49747030
Alignment:
Q  182 attaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||| ||||||||||||||||||||||||    
T  49747063 attaattgtgttgatttcaatgataaaattagta 49747030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 6609913 - 6609829
Alignment:
Q  133 tctcaaaataaaagtt-gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| |||| ||||||  ||| |||| |||| |||||| ||||||||||||| |||||||  ||| ||||||||||||    
T  6609913 tctctaaataatagttcgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 6609829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 49579172 - 49579228
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttga-tttcaatgataaaatta 212  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| |||||||||||||    
T  49579172 tttgtgcatgatttttaaataaatgattaattgtgttgatttttaatgataaaatta 49579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 32440292 - 32440213
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  32440292 tctcaaaataatagtcgttaaaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatgataaaatta 32440213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 38508149 - 38508232
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| ||| |||||||||||||||  ||||||||||  ||||||||||||| || ||||||||| ||||||||||||    
T  38508149 tctcaaaataatagtcgtttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagtat 38508232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 8698447 - 8698379
Alignment:
Q  146 gttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||||||||| |||||||| |||| |||| | ||||||||||||| |||||||||||| ||||||||||    
T  8698447 gttgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattagt 8698379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 843588 - 843509
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||| ||||| | ||||||||| |||||||| |||| |||||  ||||||||||| | |||||||||||||||||||||    
T  843588 tctcacaataataattgtttaaggtttgtgcacgattattaagaaaatgattaattttgttgatttcaatgataaaatta 843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 9515881 - 9515814
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||||| |||| |||||  ||||||||||||| |||||||||||| ||||||||||||    
T  9515881 gtttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggtaaaattagtat 9515814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 15439299 - 15439364
Alignment:
Q  151 ttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||| |||||||| ||| ||||||| ||||||||||||| || ||||||||| ||||||||||||    
T  15439299 ttaagttttgtgcacgatatttaaggaaatgattaattgtattaatttcaatggtaaaattagtat 15439364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 8724986 - 8725050
Alignment:
Q  148 tgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||| |||||||| |||| |||| | ||||||||||||| |||||||||||| ||||||||    
T  8724986 tgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaatta 8725050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 27542930 - 27542867
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| |||||||| |||| |||||| ||||||| ||||| |||||||||||| ||||||||    
T  27542930 gtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 27542867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 29570527 - 29570464
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||||||||||| |||| |||| | ||||||||||||| ||||||| |||| ||||||||    
T  29570527 gtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaatta 29570464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 2232051 - 2232117
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||||| |||| |||||  ||||| ||||||| |||||||||||| |||||||||||    
T  2232051 gtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagta 2232117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 3076696 - 3076658
Alignment:
Q  178 aatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  3076696 aatgattaattgtgttgatttcaatgataaaattagtat 3076658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 4818686 - 4818620
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||||| |||| |||||| ||| ||||||||| |||||||||||  |||||||||||    
T  4818686 gtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagta 4818620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 15818458 - 15818524
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| ||| |||| |||| |||||| |||| |||||||| |||||||||||| |||||||||||    
T  15818458 gtttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggtaaaattagta 15818524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 40530202 - 40530268
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| | |||||| |||| |||||  ||||||||||||| |||||||||||| |||||||||||    
T  40530202 gtttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 40530268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 42922845 - 42922894
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgattt 198  Q
    ||||||||||||||||||||| |||||  ||||||||||||| |||||||    
T  42922845 gtttaagatttgtgcatgattattaagaaaatgattaattgtgttgattt 42922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 37184044 - 37184120
Alignment:
Q  136 caaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||| || | |||||| |||||||| |||||||||   ||||||||||||  |||||||||||| ||||||||    
T  37184044 caaaataatagatctttaagttttgtgcaagatttttaaaaaaatgattaattgagttgatttcaatggtaaaatta 37184120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 1248582 - 1248645
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||||||||||| | || |||||| ||| ||||||| | |||||||||||| ||||||||    
T  1248582 gtttaagatttgtgcacggttattaaggaaattattaattatgttgatttcaatggtaaaatta 1248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 7827904 - 7827971
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| ||||| || |||| |||||  ||| ||||||||| |||||||||||| ||||||||||||    
T  7827904 gtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtat 7827971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 30512675 - 30512726
Alignment:
Q  161 tgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||| |||||| ||||||||||||| |||||||||||| ||||||||    
T  30512675 tgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaatta 30512726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 30553015 - 30553066
Alignment:
Q  161 tgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||| |||||| ||||||||||||| |||||||||||| ||||||||    
T  30553015 tgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaatta 30553066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 41478978 - 41478897
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||| |||||| ||| || |||| |||||||  ||||||||||  |||||||||||||  | ||||||||| ||||||||||    
T  41478978 tctctaaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagt 41478897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 11796128 - 11796208
Alignment:
Q  132 ctctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||||||| ||| ||||||| |||| |||  || || |||  |||| |||||||| ||||||| |||||||||||||    
T  11796128 ctctcaaaataatagtggtttaaggtttgcgcacaatgttaaagaaaatggttaattgtgttgattttaatgataaaatta 11796208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 29856180 - 29856119
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||||||||||| |||| |||||| ||| |  |||||  |||||||||||||||||||||    
T  29856180 gtttaagatttgtgcacgattattaaggaaataa--aattgcgttgatttcaatgataaaatta 29856119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 41492448 - 41492372
Alignment:
Q  138 aaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||||| ||| || |||| |||||||  ||||||||||  |||||||||||||  | ||||||||| ||||||||||    
T  41492448 aaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagt 41492372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 1778777 - 1778714
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| ||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  1778777 gtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaatta 1778714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 12736540 - 12736619
Alignment:
Q  137 aaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| ||||||||||  |||||||| ||||||||||| ||||||||||||| ||||||  |||||||||||||||||    
T  12736540 aaaataatagttgtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgattctaatgataaaattagtat 12736619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 14194702 - 14194624
Alignment:
Q  137 aaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| ||| ||||||| |||||||| ||||||||| | |||||| |||||| ||||||||||||||||||||||||    
T  14194702 aaaataacagtcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagta 14194624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 38795495 - 38795402
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtataatctaccca 226  Q
    ||||||||||| ||| ||||||  |||||||| ||| ||||||| ||||||||||||| || ||||||||| |||||||||||| || ||||||    
T  38795495 tctcaaaataatagtcgtttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggtaaaattagtatcatttaccca 38795402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 40462463 - 40462386
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaat 210  Q
    ||||||||||| | ||||||||| |||| || |||||||||||  ||||||||||||||||||||||| |||||||||    
T  40462463 tctcaaaataataattgtttaaggtttgagcgtgatttttaagaaaatgattaattgttttgatttcagtgataaaat 40462386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 10366606 - 10366689
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||| ||||||| |||||||| |||| |||||  ||||||||||||| |||||||||||| ||||||||||||    
T  10366606 tctctaaataacagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtat 10366689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 8679034 - 8679100
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||||| |||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  8679034 gtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 8679100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 43253843 - 43253909
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  43253843 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 43253909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 30861529 - 30861470
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaa 209  Q
    ||||||||||||||||||||||||| || ||| ||||||||| ||||||||||||||||||    
T  30861529 gtttaagatttgtgcatgattttta-ggaaattattaattgtgttgatttcaatgataaaa 30861470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 37772944 - 37773007
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| ||||||||||||| |||||| ||||||||||||| |||||| ||||| ||||||||    
T  37772944 gtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaatta 37773007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 37312085 - 37312019
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| ||| |||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  37312085 gtttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 37312019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 51837940 - 51838002
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||| ||||||||||| | |||||  ||||||||||||| |||||||||||||||||||||    
T  51837940 tttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaatta 51838002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 37695629 - 37695709
Alignment:
Q  133 tctcaaaataaaagttgtttaagattt-gtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||||| ||| ||||||| ||| ||||| |||| |||||| ||||||||||||| |||||||||||| ||||||||    
T  37695629 tctctaaataatagtcgtttaaggttttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 37695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 19609450 - 19609371
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| | | |||||||||||||| |||| |||||||  |||||||| |||| |||||||||||  ||||||||    
T  19609450 tctcaaaataataatcgtttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatcgtaaaatta 19609371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 19823150 - 19823079
Alignment:
Q  145 agttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| |||||||| |||| |||||| ||||||||||||| |||||||  ||| || |||||||||    
T  19823150 agttgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagtat 19823079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 30190640 - 30190707
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||||| | || | |||| ||||||||||||| |||||||||||| ||||||||||||    
T  30190640 gtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagtat 30190707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 44301713 - 44301630
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||||||  || ||||||| |||||||  || |||||||| |||  |||||| | |||||||||||||||||||||||||    
T  44301713 tctcaaaataatggtcgtttaaggtttgtgcccgacttttaaggaaatatttaattatgttgatttcaatgataaaattagtat 44301630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 33491063 - 33491125
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatt 211  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||  |||||||    
T  33491063 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 24569082 - 24569143
Alignment:
Q  151 ttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||| |||| |||| |||||  ||||||||||||| |||||||||||| ||||||||    
T  24569082 ttaagatttatgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatta 24569143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 27471470 - 27471405
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||||||||||||||| |||| |||||  ||||||||||| | |||||||||||| | ||||||||    
T  27471470 gtttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagt 27471405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 28690760 - 28690825
Alignment:
Q  147 ttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||| |||||||| |||| |||| | ||||||||||||| |||||||||| | ||||||||    
T  28690760 ttgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggtaaaatta 28690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 50035198 - 50035263
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||| ||||||||||||| |||||  ||||| ||||| | ||||||||||| ||||||||||||    
T  50035198 tttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattagta 50035263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 37497627 - 37497560
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| |||| |||| |||||| ||||||| ||||| |||||||  ||| ||||||||||||    
T  37497627 gtttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagtat 37497560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 45811802 - 45811727
Alignment:
Q  137 aaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| ||||||||||| ||||||  |||| ||||||  ||||||||||| | ||||||| |||| ||||||||    
T  45811802 aaaataatagttgtttaaggtttgtgtgtgatatttaagaaaatgattaattatgttgattttaatggtaaaatta 45811727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 34750630 - 34750564
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||| |||||||| ||||||| | | ||||||| ||||| ||||||| |||| ||||||||||||    
T  34750630 tttaaggtttgtgcacgatttttgatgaaatgattgattgtgttgattttaatggtaaaattagtat 34750564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 7757640 - 7757599
Alignment:
Q  171 ttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||| || |||||||||| |||||||||||||||||||||    
T  7757640 ttaaggaaaagattaattgtgttgatttcaatgataaaatta 7757599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 11632214 - 11632150
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||||||||| |||| ||||   ||||||||||||| |||||||||| | |||||||||||    
T  11632214 tttaagatttgtgcacgattattaaaa-aatgattaattgtgttgatttcaacggtaaaattagta 11632150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 19612045 - 19611980
Alignment:
Q  147 ttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||  |||||| | ||||||||||  | ||||||||||| |||||||||||| ||||||||    
T  19612045 ttgtttaaagtttgtgtacgatttttaagaaagtgattaattgtgttgatttcaatgttaaaatta 19611980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 5322915 - 5322980
Alignment:
Q  145 agttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| |||||||| |||| ||||   ||||||||||| | ||||||||| |||||||||||    
T  5322915 agttgtttaaggtttgtgcacgattattaaa--aatgattaattatgttgatttcagtgataaaatta 5322980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 23004384 - 23004428
Alignment:
Q  171 ttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||| ||||||||||||| | |||||||||| |||||||||||    
T  23004384 ttaaggaaatgattaattgtgtcgatttcaatggtaaaattagta 23004428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 30682065 - 30682113
Alignment:
Q  168 tttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||| |||||||||||||||| |||| |||| |||||| |||||    
T  30682065 tttttaaggaaatgattaattgttttaattttaatgttaaaatgagtat 30682113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 6160426 - 6160509
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| ||| ||||| || ||||| | ||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  6160426 tctcaaaataatagtcgtttacgacttgtgtacgatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtat 6160509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 31042931 - 31042865
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||| ||||||||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||    
T  31042931 tttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtat 31042865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 28749125 - 28749060
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||||||||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  28749125 tttaagatttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 28749060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 6267823 - 6267906
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| ||| ||||||| ||||||||  |||||||| | ||||||||||||| ||||||| |||||||||| ||||||    
T  6267823 tctcaaaataatagtcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagtat 6267906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 12039217 - 12039151
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  12039217 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 12039151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 26093546 - 26093466
Alignment:
Q  132 ctctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||| ||||||  || |||||||||||||||| |||| |||||  ||||||||||||| |||||||||||| ||||||||    
T  26093546 ctctctaaataatggtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatta 26093466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 11450034 - 11449955
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||||| ||||||||||| |||||||| |||| |||||| |||| |||||| | |||||||||||| ||||||||    
T  11450034 tctctaaataatagttgtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaatta 11449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 27897082 - 27897020
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtataat 219  Q
    |||||||||||||||||||| ||| |||||  || ||||||| ||||||||||||||||||||    
T  27897082 tttgtgcatgatttttaaggaaataattaaacgtgttgattttaatgataaaattagtataat 27897020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 39864238 - 39864180
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  39864238 tttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 39864180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 3260738 - 3260654
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgattttt-aagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||| |||||||||||||| ||||||||| || | |||||||| |||| ||||||||||| |||||| ||||||    
T  3260738 tctctaaataatagtcgtttaagatttgtgtatgattttttaaagaaatgattagttgtgttgatttcaataataaaagtagtat 3260654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 34031509 - 34031573
Alignment:
Q  148 tgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||| ||||||||||||| |||||| |||||||| |||| |||||| ||||| ||||||||    
T  34031509 tgtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaatta 34031573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 9307762 - 9307699
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| ||||| || |||| |||||| ||||||||| ||| |||||||||||||||||||||    
T  9307762 gtttaaggtttgtacacgattattaaggaaatgattaactgtgttgatttcaatgataaaatta 9307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 12151311 - 12151244
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||| |||||| ||||||  || ||||||| | |||||||||||||||||||||||||    
T  12151311 gtttaaggtttgtgtatgattattaaggagattattaattatgttgatttcaatgataaaattagtat 12151244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 35682796 - 35682855
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||| ||||||||| | || |||||||||| |||||||||||||||| ||||||||    
T  35682796 tttgtgcacgatttttaacgaaaagattaattgtgttgatttcaatgataacattagtat 35682855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 3312260 - 3312179
Alignment:
Q  135 tcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||| |||  ||||||||||||  || ||||| || | ||||||||||||| ||||||| |||||| ||||||||||    
T  3312260 tcaaaataatagtcatttaagatttgtatataattttaaaagaaatgattaattgtgttgattttaatgattaaattagtat 3312179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 31154234 - 31154189
Alignment:
Q  178 aatgattaattgttttgatttcaatgataaaattagtataatctac 223  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  31154234 aatgattaattgtgttgattttaatgataaaattagtattatctac 31154189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 36702037 - 36701989
Alignment:
Q  168 tttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||||||    
T  36702037 tttttaaggaaatgattaattatgttgatttcaatggtaaaattagtat 36701989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 36718141 - 36718093
Alignment:
Q  168 tttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||||||    
T  36718141 tttttaaggaaatgattaattatgttgatttcaatggtaaaattagtat 36718093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 24991636 - 24991699
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| ||||| || |||| |||||| ||||||||||||| |||||||||| | ||||||||    
T  24991636 gtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaatta 24991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 32970534 - 32970613
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| | | ||||||| || ||  | |||| |||||  ||||||||||||| |||||||||||||||||||||    
T  32970534 tctcaaaataatattcgtttaaggttcgtatacgattattaagaaaatgattaattgtgttgatttcaatgataaaatta 32970613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 23168984 - 23169042
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||| |||| |||||  ||| ||||||||| |||||||||||| |||||||||||    
T  23168984 tttgtgcacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagta 23169042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 30754924 - 30754986
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatt 211  Q
    ||||||||||| |||| |||| |||||| ||||||||||||| ||||||| || | |||||||    
T  30754924 gtttaagatttatgcacgattattaaggaaatgattaattgtgttgattttaagggtaaaatt 30754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 17988572 - 17988609
Alignment:
Q  180 tgattaattgttttgatttcaatgataaaattagtata 217  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  17988572 tgattaattgtgttgatttcaatgttaaaattagtata 17988609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 24499962 - 24500011
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatga 182  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||| |||||    
T  24499962 tctcaaaataatagtcgtttaacatttgtgcctgatttttaaggaaatga 24500011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 44707772 - 44707809
Alignment:
Q  178 aatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  44707772 aatgattaattatattgatttcaatgataaaattagta 44707809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 37506240 - 37506196
Alignment:
Q  171 ttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||| ||||||||||||| |||||||  |||||||||||||||    
T  37506240 ttaaggaaatgattaattgtgttgattttgatgataaaattagta 37506196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 21216082 - 21216147
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    ||||||| ||||||||||||| |||||| ||||||||||||| |||||||||||| ||||||||||    
T  21216082 gtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagt 21216147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 7173066 - 7172983
Alignment:
Q  132 ctctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||| |||| | ||||||||||| |||||| || ||| |||| | ||||||||||||| ||||||||||||||||||||||||    
T  7173066 ctctctaaattatagttgtttaaggtttgtgtatcattattaaagaaatgattaattgtgttgatttcaatgataaaattagta 7172983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 39405897 - 39405830
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  39405897 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtat 39405830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 1875573 - 1875639
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  1875573 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 1875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 27294024 - 27294107
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||| ||||| ||||| |||||||| ||||||||| | | | ||||||||| || |||| |||||||||||||||||    
T  27294024 tctcaaaataatagttggttaaggtttgtgcacgatttttaaagaagttattaattgtgttcatttgaatgataaaattagtat 27294107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 39482750 - 39482684
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||||||||||| |||| |||||  ||||||||||||| |||||||||| | |||||||||||    
T  39482750 gtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagta 39482684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 42972490 - 42972552
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||| |||||||| |||| |||||  |||||||||||||||||||||||||| ||||||||    
T  42972490 tttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggtaaaatta 42972552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 9839825 - 9839874
Alignment:
Q  167 atttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  9839825 atttttaaggaaatgattaaatgttttgatttcaacgataaaattagtat 9839874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 31082758 - 31082689
Alignment:
Q  145 agttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    ||||||||| | |||||||| |||  |||||| ||||||||||||| ||||||| |||||||||||||||    
T  31082758 agttgtttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatgataaaattagt 31082689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 51263 - 51181
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||||||||||| |||||||| |||| |||||  ||||||||||||| ||||||| |||| |||||| |||||    
T  51263 tctctaaataatagttgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaatg-taaaataagtat 51181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 10179928 - 10179998
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtataat 219  Q
    ||||||| |||||||| |||| |||||  ||||| || |||| |||||||||||| |||||||||||||||    
T  10179928 gtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtataat 10179998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 29226208 - 29226278
Alignment:
Q  145 agttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||||||||| ||||| ||| |||||  ||||||||||||| |||||||  ||| |||||||||||    
T  29226208 agttgtttaagatttatgcataattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 29226278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 39329430 - 39329370
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatt 211  Q
    |||||| ||||||||  |||||||||  ||||||||||||| ||||||||||||||||||||    
T  39329430 tttaagttttgtgcacaatttttaaga-aatgattaattgtgttgatttcaatgataaaatt 39329370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 1739772 - 1739709
Alignment:
Q  152 taagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||| |||||| | |||| |||||| ||| ||||||||| |||||||||||| |||||||||||    
T  1739772 taaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggtaaaattagta 1739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 4428317 - 4428395
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| ||| ||||||| ||| || || |||||||||  |||||||| |||| ||||||| |||||||||||||    
T  4428317 tctcaaaataatagtcgtttaaggtttatgtat-atttttaagaaaatgattatttgtgttgattttaatgataaaatta 4428395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 17719223 - 17719306
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||| |||||||||||||||| |||| ||||   |||||||||||||  |||||| |||| |||| |||||||    
T  17719223 tctctaaataatagtcgtttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagtat 17719306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 17824055 - 17823989
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||| || |||||||||| || | ||||| || |||||||||||||||||||||||||    
T  17824055 gtttaaggtttgtgtattatttttaaggaaaag-ttaatcgtgttgatttcaatgataaaattagtat 17823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 32476438 - 32476359
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||| ||||| ||||||| |||||||| | || |||||  ||||||| ||| | |||||||||||||||||||||    
T  32476438 tctctaaattaaagtcgtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatgataaaatta 32476359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 34948668 - 34948735
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||||||| ||  ||| |||||| ||||||||||||| ||||||| |||  ||||||||||||    
T  34948668 gtttaagatttgtacacaattattaaggaaatgattaattgtgttgatttaaatagtaaaattagtat 34948735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 45425647 - 45425710
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| ||| ||||||||| |||||  ||||||||||||| ||||||| |||| ||||||||    
T  45425647 gtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaatta 45425710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 5356725 - 5356671
Alignment:
Q  158 ttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||||| |||| ||| |||||||| |||| ||||||| |||||||||||||    
T  5356725 ttgtgcatgactttttaggaaatgattagttgtgttgattttaatgataaaatta 5356671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 11976917 - 11976971
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatg 203  Q
    ||||||| ||||||||||||| ||| || ||| ||||||||| ||||||||||||    
T  11976917 gtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatg 11976971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 31331522 - 31331480
Alignment:
Q  170 tttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||    
T  31331522 tttaaggaaatgattaattgtattgatttcaattataaaatta 31331480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 36967507 - 36967433
Alignment:
Q  138 aaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||| ||| ||||||| ||| |||| |||| |||||| ||||||||||||| |||||||  ||| ||||||||    
T  36967507 aaataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaatta 36967433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 39329153 - 39329087
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||| |||||| |  |||||||||  ||||||||||||| || |||| |||||||||||||||||    
T  39329153 tttaagttttgtgtacaatttttaagaaaatgattaattgtgttaattttaatgataaaattagtat 39329087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 35732368 - 35732327
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaa 174  Q
    ||||||||||| | ||||||||| ||||||||||||||||||    
T  35732368 tctcaaaataataattgtttaagttttgtgcatgatttttaa 35732327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 40109860 - 40109799
Alignment:
Q  158 ttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtataat 219  Q
    ||||||| | ||||||| | ||||||||||||  |||||||||||  |||||||||||||||    
T  40109860 ttgtgcacggtttttaaagaaatgattaattgaattgatttcaatagtaaaattagtataat 40109799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 44761504 - 44761541
Alignment:
Q  178 aatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  44761504 aatgattaattgtgttgatttcaatggtaaaattagta 44761541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 7703128 - 7703200
Alignment:
Q  140 ataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| ||| ||||||  |||||| | |||| |||||| ||| ||||||||| |||||||||||| ||||||||    
T  7703128 ataatagtcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggtaaaatta 7703200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 34393957 - 34394005
Alignment:
Q  171 ttaagggaatgattaattgttttgatttcaatgataaaattagtataat 219  Q
    |||||| ||||||||||||| |||||||  ||| |||||||||||||||    
T  34393957 ttaaggaaatgattaattgtgttgattttgatggtaaaattagtataat 34394005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 34455684 - 34455728
Alignment:
Q  167 atttttaagggaatgattaattgttttgatttcaatgataaaatt 211  Q
    |||||||||| ||||| ||||||| ||||||| ||||||||||||    
T  34455684 atttttaaggaaatgactaattgtgttgattttaatgataaaatt 34455728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 50339 - 50272
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  50339 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtat 50272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 17170 - 17104
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| ||||||||||||| |||||  ||||||||||||| |||||||||||| |||||||||||    
T  17170 gtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 17104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 31894189 - 31894255
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||||||||| |||||| |||||  ||||||||||||| |||||||||||| |||||||||||    
T  31894189 gtttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 31894255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 7920389 - 7920310
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| |   |||||||||||||||| ||||||||| | ||||||||||| | |||||||||||| ||||||||    
T  7920389 tctcaaaataatatccgtttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggtaaaatta 7920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 1063600 - 1063649
Alignment:
Q  167 atttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  1063600 atttttaagaaaatgattaattgtgttgatttcaatgataaaattagtat 1063649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 3720220 - 3720282
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatt 211  Q
    ||||||| |||||||| |||| |||| | ||||||||||||| ||||||||||| ||||||||    
T  3720220 gtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgatttcaattataaaatt 3720282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 13909551 - 13909494
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||||||| |||| |||||| ||||||||| ||| |||||||||||| ||||||||||    
T  13909551 tttgtgcacgattattaaggaaatgattaaatgtgttgatttcaatggtaaaattagt 13909494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 3291731 - 3291814
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||| ||||||| ||| |||| |||| |||||| ||||||||||||| | ||||| |||| ||| ||||||||    
T  3291731 tctctaaataatagtcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagtat 3291814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 15582430 - 15582351
Alignment:
Q  137 aaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| ||| |||||||||||||  |  || |||||  |||||||||||||| |||||||||||| |||||| |||||    
T  15582430 aaaataatagtcgtttaagatttgtagacaatatttaaatgaatgattaattgtgttgatttcaatggtaaaatcagtat 15582351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 21804516 - 21804575
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||| |||||||| | ||||||||||||| || ||||||||  ||||||||||||    
T  21804516 tttgtgcataatttttaaagaaatgattaattgtattaatttcaattgtaaaattagtat 21804575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 32440608 - 32440691
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||| ||||||||||| |||| | || || ||| ||||||||||||| |||||||  ||| ||||||||||||    
T  32440608 tctctaaataatagtcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattttgatggtaaaattagtat 32440691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 16406798 - 16406832
Alignment:
Q  182 attaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||||| |||||||||||||||||||||||||    
T  16406798 attaattgtgttgatttcaatgataaaattagtat 16406832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 28101327 - 28101405
Alignment:
Q  138 aaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||| ||| |||||| |||| | ||| ||||||||| |||  ||| ||| | |||||||||||||||||||||||||    
T  28101327 aaataatagtcgtttaaaatttatacataatttttaagagaagtatttattatgttgatttcaatgataaaattagtat 28101405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 8947038 - 8947096
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  8947038 tttgtgcataattattaaggaaatgattaattgtgttgatttcaatgataaaattagta 8947096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 18853164 - 18853236
Alignment:
Q  135 tcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataa 207  Q
    ||||||||| ||| |||||| ||||||||| ||| ||||||| ||| ||||||||| ||||||||||||||||    
T  18853164 tcaaaataatagtcgtttaaaatttgtgcacgatctttaaggaaataattaattgtgttgatttcaatgataa 18853236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 19937812 - 19937749
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||| ||||||||    
T  19937812 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 19937749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 39691625 - 39691562
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| |||||||| |||| |||||  ||||||||||||| |||||||||||||||||||||    
T  39691625 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaatta 39691562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 45235732 - 45235653
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||||| ||| ||||||| |||||||| |||| |||||| ||||||| ||||| |||||||||||| ||||||||    
T  45235732 tctctaaataatagtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 45235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 17695465 - 17695403
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatt 211  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||| |||||||    
T  17695465 gtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaatt 17695403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 15435498 - 15435447
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaa 208  Q
    |||||||||||||||||||  ||| ||||||||| |||||||||||||||||    
T  15435498 tttgtgcatgatttttaagaaaataattaattgtgttgatttcaatgataaa 15435447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 16377634 - 16377697
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||||||||||| |||| |||| | ||||||||||||| |||||| ||||| ||||||||    
T  16377634 gtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggtaaaatta 16377697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 27501516 - 27501583
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||| |||||| |||||| |||||| |||| | |||||||||||| ||||||||||||    
T  27501516 gtttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagtat 27501583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 36794435 - 36794352
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||| ||||||||||  |||||| || |||||| ||||||||||||| |||||||  ||| ||||||||||||    
T  36794435 tctctaaataatagtcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 36794352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 26607946 - 26608008
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatt 211  Q
    ||||||| |||||||| |||| |||||  ||||||||||||| |||||||||||| |||||||    
T  26607946 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 35314010 - 35313956
Alignment:
Q  161 tgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||| |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  35314010 tgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 35313956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 5789627 - 5789691
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||||| |||||||| |||| |||||| ||||||||||||| |||| ||||||  ||||||||||    
T  5789627 tttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagt 5789691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 31448671 - 31448735
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattag 213  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| |||||||  ||| |||||||||    
T  31448671 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattag 31448735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 16463840 - 16463757
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||| ||||||| ||| |||| | || |||||| ||||||||||||| |||||||  ||| ||||||||||||    
T  16463840 tctctaaataatagtcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 16463757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 16806016 - 16805949
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||||| |||| |||| | ||||||||||||| ||||||| |||  ||||||||||||    
T  16806016 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtat 16805949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 16845297 - 16845230
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| |||||||| |||| |||| | ||||||||||||| ||||||| |||  ||||||||||||    
T  16845297 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtat 16845230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 43410553 - 43410498
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||||| |||| |||||| ||| ||||||||| ||||| |||||||||||||||    
T  43410553 tttgtgcacgattattaaggaaattattaattgtgttgatatcaatgataaaatta 43410498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 3323264 - 3323330
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| |||||||| |||| |||    ||||||||||||| |||||||||||| |||||||||||    
T  3323264 gtttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggtaaaattagta 3323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 43115788 - 43115846
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||  |||| |||| | ||||||||||||| ||||||||||||||||| ||||||    
T  43115788 tttgtgcgcgattattaaagaaatgattaattgtgttgatttcaatgataaagttagta 43115846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 25637631 - 25637551
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||| |||||| ||||||||||| ||| |||| |||| | |||| ||||||||||||| |||||||  ||| ||||||||||    
T  25637631 tctctaaataatagttgtttaaggtttatgcacgattat-aaggaaatgattaattgtgttgattttgatggtaaaattagt 25637551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 41220954 - 41220991
Alignment:
Q  179 atgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  41220954 atgattaattgtgttgatttcaattataaaattagtat 41220991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 16233 - 16170
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||||| || |||| |||||| ||||||||||||| ||||||| |||||||||||||    
T  16233 gtttaagatttgttcacgattattaaggaaatgattaattgtgttgattttaatgataaaatta 16170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 2850876 - 2850931
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||||| |||||| ||||||||||| | |||||||||||||||||||||    
T  2850876 tttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaatta 2850931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 16904537 - 16904458
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| ||| ||||||| ||||||||  |||||||||  ||||||||||||| |||||||||||  ||||||||    
T  16904537 tctcaaaataatagtcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaatta 16904458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 26974171 - 26974108
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||| |||||||| |||| |||||| ||||||||||||| |||||||||||| ||||||||    
T  26974171 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 26974108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 34947658 - 34947579
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||||| ||| ||||||| |||||||||| || |||| | ||||||||||||| |||||||||||| ||||||||    
T  34947658 tctctaaataatagtcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaatta 34947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 7463355 - 7463289
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||  ||||||| | || |||||| ||||||||||||| ||||||||||||||||||||||||    
T  7463355 gtttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatgataaaattagta 7463289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 8592427 - 8592493
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||| ||||||||||||| |||| | ||||||||||||| |||||||||||| | |||||||||    
T  8592427 gtttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagta 8592493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 44180363 - 44180277
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtataat 219  Q
    |||| |||||| ||| ||||||| ||| | || |||| |||||  ||||||||||||| |||||||||||| |||||||||||||||    
T  44180363 tctctaaataatagtcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtataat 44180277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 28103875 - 28103811
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattag 213  Q
    ||||||| |||||||| |||| |||||  ||||||||||||| |||||||||||| |||||||||    
T  28103875 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattag 28103811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 21759971 - 21760038
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| ||||||||||||| |||||  ||||||||||||| |||||||  ||| ||||||||||||    
T  21759971 gtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 21760038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 5524514 - 5524456
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||| |||| |||||  ||||||||||||| |||||||||||| |||||||||||    
T  5524514 tttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 5524456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 34100530 - 34100600
Alignment:
Q  145 agttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||||||||||||  | |||| |||||  ||||||||||||| |||||||||||  |||||||||||    
T  34100530 agttgtttaagatttgtcaacgattattaagaaaatgattaattgtgttgatttcaatagtaaaattagta 34100600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 2459603 - 2459546
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||||||| |||| |||||| ||||||||||||| |||||||||| | ||||||||||    
T  2459603 tttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattagt 2459546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 12631446 - 12631381
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||| |||||||| |||| |||||| ||| ||||||||| |||||||||||  |||||||||||    
T  12631446 tttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaatagtaaaattagta 12631381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 33819339 - 33819290
Alignment:
Q  166 gatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||| |||||| ||||||||||||| |||||||||||| |||||||||||    
T  33819339 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 33819290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 83543 - 83460
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||| |||||| ||| ||||||| ||| ||||  ||| |||||| ||||||||||||| |||||||  ||| ||||||||||||    
T  83543 tctctaaataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 83460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 3178187 - 3178254
Alignment:
Q  145 agttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| ||||||||||||| |||||  ||||||| ||||| |||||||  ||| ||||||||    
T  3178187 agttgtttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaatta 3178254  T

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Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 9786146 - 9786067
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||||| ||| ||||||| | |||||| |||| |||||| ||||||||||||| |||||||  ||| ||||||||    
T  9786146 tctctaaataatagtcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaatta 9786067  T

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Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 22738843 - 22738776
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    ||||||| ||| |||| |||| |||| | ||||||||||||| | |||||||||| ||||||||||||    
T  22738843 gtttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggtaaaattagtat 22738776  T

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Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 11373415 - 11373481
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    |||||||  ||||||| |||| |||||| |||| |||||||| |||||||| ||| |||||||||||    
T  11373415 gtttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggtaaaattagta 11373481  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 13962100 - 13962038
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||||| ||| |||| | || |||||| ||||||||||||| ||||||| |||||||||||||    
T  13962100 tttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatgataaaatta 13962038  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 32346035 - 32346113
Alignment:
Q  145 agttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtataatctac 223  Q
    ||||||||||| |||||| | | || |||||| ||| ||| ||||| |||||||||||| |||||||| ||| ||||||    
T  32346035 agttgtttaaggtttgtgtacggttattaaggaaataattgattgtgttgatttcaatggtaaaattaatatcatctac 32346113  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 24516305 - 24516342
Alignment:
Q  178 aatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  24516305 aatgattaattgtgttgatttcaatggtaaaattagta 24516342  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 19271749 - 19271785
Alignment:
Q  178 aatgattaattgttttgatttcaatgataaaattagt 214  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  19271749 aatgattaattgtgttgatttcaatgatcaaattagt 19271785  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 41506054 - 41506118
Alignment:
Q  151 ttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagta 215  Q
    ||||| ||| |||| |||| |||||| ||||||||||||| || |||| |||| |||||||||||    
T  41506054 ttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggtaaaattagta 41506118  T

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Target: scaffold0583 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 2176 - 2097
Alignment:
Q  133 tctcaaaataaaagttgtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    |||| |||||||||| ||||||| ||  |||| |||| |||||| | ||||||||||| || ||||||||||||||||||    
T  2176 tctctaaataaaagtcgtttaaggttcatgcacgattattaaggaagtgattaattgtgttaatttcaatgataaaatta 2097  T

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Target: scaffold0464 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 6273 - 6332
Alignment:
Q  157 tttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagtat 216  Q
    |||||||| ||||||||| | ||||||||||||| ||||||  |||||||||||||||||    
T  6273 tttgtgcacgatttttaacgaaatgattaattgtgttgattctaatgataaaattagtat 6332  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 105819 - 105756
Alignment:
Q  149 gtttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaatta 212  Q
    ||||||||||| ||||||||| |||||  ||||||||||||| || ||||||||| ||||||||    
T  105819 gtttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaatta 105756  T

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Target: scaffold0159 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 34000 - 34064
Alignment:
Q  150 tttaagatttgtgcatgatttttaagggaatgattaattgttttgatttcaatgataaaattagt 214  Q
    |||||| |||||||| |||| |||||| ||||||||||||| |||| ||||||  ||||||||||    
T  34000 tttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagt 34064  T

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