View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1372_low_4 (Length: 523)
Name: NF1372_low_4
Description: NF1372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1372_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 481; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 7 - 495
Target Start/End: Complemental strand, 3464203 - 3463715
Alignment:
| Q |
7 |
aagcaaaggagaagaatgcttatcgctggttatgatcttgatatgtcatatatcacagatagagtattagcaatgtcatttcctgctgaacgtatgagag |
106 |
Q |
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| T |
3464203 |
aagcaaaggagaagaattcttatcgctggttatgatcttgatatgtcatatatcacagatagagtattagcaatgtcatttcctgctgaacgtatgagag |
3464104 |
T |
|
| Q |
107 |
caatgtatagaaatcctctctggcaagtcaaatctgtgttggatatgagacatcttgaacattataaggtatgcaagtttgaatcaaccagcatgtaaat |
206 |
Q |
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| T |
3464103 |
caatgtatagaaatcctctctggcaagtcaaatctgtgttggatatgagacatcttgaacattataaggtatgcaagtttgaatcaaccagcatgtaaat |
3464004 |
T |
|
| Q |
207 |
ttcatagtactagcatctaacatacccttaataatccgactatggaccagtactcgaaaattgtttgaaaatctaaccacgacagacaaacattgtcttt |
306 |
Q |
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| T |
3464003 |
ttcatagtactagcatctaacatacccttaataatccgactatggaccagtactcgaaaattgttcgaaaatctaaccacgacagacaaacattgtcttt |
3463904 |
T |
|
| Q |
307 |
tgagattagaagtggatgacacaattattgattgaagcataccacttttgaaattttcaggtctataatctgtgtatagaagaacattatgatccagcac |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3463903 |
tgagattagaagtggatgacacaattattgattgaagcataccacttttgaaattttcaggtctataatctgtgtatagaagaacattatgatccagcac |
3463804 |
T |
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| Q |
407 |
agttctatggtcgtgtggaagaatacccttttgatgacaatcatgttccatctcttgaaatgattaaagatttctgcgaaagtgtgaat |
495 |
Q |
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| T |
3463803 |
agttctatggtcgtgtggaagaatacccttttgatgacaatcatgttccatctcttgaaatgattaaagatttctgcgaaagtgtgaat |
3463715 |
T |
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