View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1373-INSERTION-4 (Length: 310)

Name: NF1373-INSERTION-4
Description: NF1373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1373-INSERTION-4
NF1373-INSERTION-4
[»] chr6 (55 HSPs)
chr6 (8-310)||(26883960-26884262)
chr6 (71-310)||(27229092-27229331)
chr6 (73-305)||(26802304-26802536)
chr6 (71-308)||(27611092-27611329)
chr6 (77-310)||(27698582-27698815)
chr6 (73-308)||(27724935-27725170)
chr6 (73-308)||(27718469-27718704)
chr6 (71-308)||(27593110-27593347)
chr6 (73-296)||(28786140-28786363)
chr6 (73-296)||(28792261-28792484)
chr6 (71-310)||(27678806-27679045)
chr6 (71-305)||(31284148-31284382)
chr6 (71-299)||(28780999-28781227)
chr6 (71-310)||(26622836-26623075)
chr6 (71-310)||(26728814-26729053)
chr6 (73-310)||(26655851-26656088)
chr6 (73-310)||(26761822-26762059)
chr6 (71-306)||(26646339-26646574)
chr6 (71-306)||(26752307-26752542)
chr6 (73-308)||(27604795-27605030)
chr6 (71-310)||(26861476-26861715)
chr6 (71-310)||(27677702-27677941)
chr6 (105-310)||(25579613-25579818)
chr6 (93-310)||(27531285-27531502)
chr6 (71-310)||(27706490-27706729)
chr6 (71-310)||(27338153-27338392)
chr6 (71-310)||(27398893-27399132)
chr6 (105-310)||(26142759-26142964)
chr6 (105-310)||(25481636-25481841)
chr6 (105-310)||(25538434-25538639)
chr6 (105-310)||(26055820-26056025)
chr6 (105-310)||(26075790-26075995)
chr6 (54-310)||(26823683-26823939)
chr6 (105-310)||(26048739-26048944)
chr6 (105-310)||(26069908-26070113)
chr6 (73-308)||(28325343-28325578)
chr6 (76-310)||(28234429-28234663)
chr6 (109-310)||(28242702-28242903)
chr6 (88-310)||(28226827-28227049)
chr6 (85-308)||(28139415-28139638)
chr6 (73-310)||(28185228-28185465)
chr6 (225-310)||(28149952-28150036)
chr6 (73-310)||(28180976-28181213)
chr6 (253-310)||(27427694-27427751)
chr6 (130-203)||(27665312-27665385)
chr6 (106-270)||(26949556-26949720)
chr6 (226-305)||(25507002-25507081)
chr6 (130-171)||(28098596-28098637)
chr6 (73-310)||(28297801-28298038)
chr6 (73-310)||(28514035-28514272)
chr6 (141-308)||(29825957-29826124)
chr6 (227-308)||(26342024-26342105)
chr6 (143-203)||(26848592-26848652)
chr6 (226-258)||(28491660-28491692)
chr6 (226-258)||(29804070-29804102)
[»] scaffold0349 (3 HSPs)
scaffold0349 (73-310)||(3509-3747)
scaffold0349 (77-299)||(14454-14676)
scaffold0349 (73-138)||(8061-8126)
[»] chr1 (3 HSPs)
chr1 (54-310)||(28127754-28128011)
chr1 (71-310)||(28164437-28164676)
chr1 (71-310)||(268432-268671)
[»] scaffold0277 (2 HSPs)
scaffold0277 (73-278)||(4791-4996)
scaffold0277 (71-296)||(13734-13959)
[»] scaffold1254 (1 HSPs)
scaffold1254 (71-296)||(19-244)
[»] scaffold0419 (1 HSPs)
scaffold0419 (71-296)||(7385-7610)
[»] chr4 (7 HSPs)
chr4 (73-310)||(18724160-18724397)
chr4 (75-310)||(18679642-18679877)
chr4 (73-310)||(18655552-18655789)
chr4 (73-310)||(18731579-18731816)
chr4 (73-310)||(18699475-18699712)
chr4 (253-310)||(17989128-17989185)
chr4 (253-310)||(18073804-18073861)
[»] chr8 (2 HSPs)
chr8 (71-310)||(29273858-29274097)
chr8 (88-242)||(31903728-31903882)
[»] scaffold0038 (4 HSPs)
scaffold0038 (73-308)||(116658-116893)
scaffold0038 (76-310)||(34590-34824)
scaffold0038 (109-310)||(42864-43065)
scaffold0038 (88-310)||(27325-27547)
[»] scaffold0019 (1 HSPs)
scaffold0019 (73-310)||(58370-58607)
[»] scaffold0003 (1 HSPs)
scaffold0003 (253-310)||(59612-59669)


Alignment Details
Target: chr6 (Bit Score: 303; Significance: 1e-170; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 8 - 310
Target Start/End: Original strand, 26883960 - 26884262
Alignment:
Q  8 cagtttccctcatttactccacaaacgacagtaacctacaattatccatggcaatgcaatcaccttcctcttcattttcctatggattcacttaccaagt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26883960 cagtttccctcatttactccacaaacgacagtaacctacaattatccatggcaatgcaatcaccttcctcttcattttcctatggattcacttaccaagt 26884059  T
Q  108 gttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgataat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26884060 gttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgataat 26884159  T
Q  208 catcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttctt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26884160 catcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttctt 26884259  T
Q  308 cat 310  Q
    |||    
T  26884260 cat 26884262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 71 - 310
Target Start/End: Original strand, 27229092 - 27229331
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| || || | |||||||||| | ||||| || || |||||||||||||||||    
T  27229092 cttcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctct 27229191  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| ||||||||||||| |||||||||||||| ||| |||||| |||||||  ||||||||||||||||||| ||||||||||||| |||||| | |||    
T  27229192 tactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatt 27229291  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  27229292 tttattcccatattttctgccaactatgcatcttcttcat 27229331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 73 - 305
Target Start/End: Original strand, 26802304 - 26802536
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || || | |||||||||||| ||||| || || |||||||||||||||||||    
T  26802304 tcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctctta 26802403  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     | ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  26802404 ttgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 26802503  T
Q  273 tattccaatattttctaccaactatgcatcttc 305  Q
    ||||||  | ||||||| ||||||||| |||||    
T  26802504 tattcctgtgttttctatcaactatgcctcttc 26802536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 71 - 308
Target Start/End: Complemental strand, 27611329 - 27611092
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||  | ||||| || ||||||||||||||||||||    
T  27611329 cttcttcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctct 27611230  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| ||||||||||||| |||||||||||||| ||| ||||||||||||||   |||||||||||||||||| ||||||||||||| |||||||| |||    
T  27611229 tactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatt 27611130  T
Q  271 tttattccaatattttctaccaactatgcatcttcttc 308  Q
    ||||||||  | ||||||| ||||||||| ||||||||    
T  27611129 tttattcctgtgttttctatcaactatgcctcttcttc 27611092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 77 - 310
Target Start/End: Complemental strand, 27698815 - 27698582
Alignment:
Q  77 cttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaa 176  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || || | |||||||||| | ||||| || |||||||||||||||||||||||| |    
T  27698815 cttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactga 27698716  T
Q  177 caagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttatt 276  Q
    |||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  27698715 caagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttatt 27698616  T
Q  277 ccaatattttctaccaactatgcatcttcttcat 310  Q
    ||  | ||||||  ||||||||||||||||||||    
T  27698615 cctgtgttttctctcaactatgcatcttcttcat 27698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 73 - 308
Target Start/End: Complemental strand, 27725170 - 27724935
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || || | |||||||||| | ||||| || ||||||||||||||||||||||    
T  27725170 tcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctctta 27725071  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| ||||||||||||| |||||||| |||||    
T  27725070 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttt 27724971  T
Q  273 tattccaatattttctaccaactatgcatcttcttc 308  Q
    ||||||  | ||||||| ||||||||| | ||||||    
T  27724970 tattcctgtgttttctatcaactatgcctattcttc 27724935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 73 - 308
Target Start/End: Complemental strand, 27718704 - 27718469
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| || || | |||||||||| |  |||| || ||||||||||||||||||||||    
T  27718704 tcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctctta 27718605  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| ||||||||||||| |||||||| |||||    
T  27718604 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttt 27718505  T
Q  273 tattccaatattttctaccaactatgcatcttcttc 308  Q
    ||||||  | ||||||| ||||||||| ||||||||    
T  27718504 tattcctgtgttttctatcaactatgcctcttcttc 27718469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 71 - 308
Target Start/End: Complemental strand, 27593347 - 27593110
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||| ||||| |||||||||  | ||  |||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  27593347 cttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctct 27593248  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| ||||||||||| |||||||||||||||| |||  ||||| ||||||||  |||||||||||||||||  |||||||||||||||| ||||| |||    
T  27593247 tactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatt 27593148  T
Q  271 tttattccaatattttctaccaactatgcatcttcttc 308  Q
    ||||||||  | ||||||| ||||||||| ||||||||    
T  27593147 tttattcctgtgttttctatcaactatgcctcttcttc 27593110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 73 - 296
Target Start/End: Original strand, 28786140 - 28786363
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||  | ||||| || ||||||||||||||||||||||    
T  28786140 tcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctctta 28786239  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||| | |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| |||||||||| ||||||||||| |||||    
T  28786240 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 28786339  T
Q  273 tattccaatattttctaccaacta 296  Q
    ||||||  | ||||||| ||||||    
T  28786340 tattcctgtgttttctatcaacta 28786363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 73 - 296
Target Start/End: Original strand, 28792261 - 28792484
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||  | ||||| || ||||||||||||||||||||||    
T  28792261 tcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctctta 28792360  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||| | |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| |||||||||| ||||||||||| |||||    
T  28792361 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttt 28792460  T
Q  273 tattccaatattttctaccaacta 296  Q
    ||||||  | ||||||| ||||||    
T  28792461 tattcctgtgttttctatcaacta 28792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 71 - 310
Target Start/End: Original strand, 27678806 - 27679045
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||| ||||| |||||||||  | ||  |||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  27678806 cttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctct 27678905  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| ||||||||||| |||||||||||||| | |||  ||||| |||||||   |||||||||||||||||  |||||||||||||||| ||||| |||    
T  27678906 tactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatt 27679005  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||  | ||||||| ||||||||| ||||||||||    
T  27679006 tttattcctgtgttttctatcaactatgcctcttcttcat 27679045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 71 - 305
Target Start/End: Original strand, 31284148 - 31284382
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||| ||||||||| |||||  |||||||| ||||| |||||||| |||||||||||||||||||||||||| || |||||||||||||||||    
T  31284148 cttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctct 31284247  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| |||||||||||||||||||||||||||||| | | |||| ||||||    ||||||||||||||||||  ||| ||||||||||| ||||| |||    
T  31284248 tactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatt 31284347  T
Q  271 tttattccaatattttctaccaactatgcatcttc 305  Q
    ||||| ||  | |||||| |||||||||| |||||    
T  31284348 tttatccccgtgttttctgccaactatgcctcttc 31284382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 71 - 299
Target Start/End: Original strand, 28780999 - 28781227
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| || || | |||||||||  | ||||| || || |||||||||||||||||    
T  28780999 cttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctct 28781098  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| ||||||||||| | |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| |||||||||| ||||||||||| |||    
T  28781099 tactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatt 28781198  T
Q  271 tttattccaatattttctaccaactatgc 299  Q
    ||||||||  | ||||||| |||||||||    
T  28781199 tttattcctgtgttttctatcaactatgc 28781227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 71 - 310
Target Start/End: Original strand, 26622836 - 26623075
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||| ||||||||  |||||  |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  26622836 cttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctct 26622935  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| |||||||||||||||||||||||||||||  | | |||| ||||||   |||||||| |||||||||   ||| || || ||||| ||||| |||    
T  26622936 tactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatt 26623035  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||  | |||||| |||||||||||| ||||||||    
T  26623036 tttattcctgtgttttctcccaactatgcatattcttcat 26623075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 71 - 310
Target Start/End: Original strand, 26728814 - 26729053
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||| ||||||||  |||||  |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  26728814 cttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctct 26728913  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| |||||||||||||||||||||||||||||  | | |||| ||||||   |||||||| |||||||||   ||| || || ||||| ||||| |||    
T  26728914 tactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatt 26729013  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||  | |||||| |||||||||||| ||||||||    
T  26729014 tttattcctgtgttttctcccaactatgcatattcttcat 26729053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 73 - 310
Target Start/End: Original strand, 26655851 - 26656088
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||||||||||||||| || |  |||||||||||||||||||| || || | |||||| ||| | ||||| || || |||||||||||||||||||    
T  26655851 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctta 26655950  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     | | ||||||||||| || ||||||||||| ||| ||||||  ||||||   |||||||||||||||||| | ||||||||||||||||| || |||||    
T  26655951 ttgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttt 26656050  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  26656051 tattcccatattttctgccaactatgcatcttcttcat 26656088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 73 - 310
Target Start/End: Original strand, 26761822 - 26762059
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||||||||||||||| || |  |||||||||||||||||||| || || | |||||| ||| | ||||| || || |||||||||||||||||||    
T  26761822 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctta 26761921  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     | | ||||||||||| || ||||||||||| ||| ||||||  ||||||   |||||||||||||||||| | ||||||||||||||||| || |||||    
T  26761922 ttgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttt 26762021  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  26762022 tattcccatattttctgccaactatgcatcttcttcat 26762059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 71 - 306
Target Start/End: Original strand, 26646339 - 26646574
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||| | ||||||| |||||||| ||||| || |||||||  ||||| || |||||||||||  | ||||| |||||| ||||||||||||||||    
T  26646339 cttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaaggctct 26646438  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| |||||||||| ||||||||||||||||||  | |||||   ||||||   ||||||||||||||||||||||||||||||||||||||||| |||    
T  26646439 tactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatt 26646538  T
Q  271 tttattccaatattttctaccaactatgcatcttct 306  Q
    ||||||||  | ||||||| ||||||||| ||||||    
T  26646539 tttattcctgtgttttctatcaactatgcctcttct 26646574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 71 - 306
Target Start/End: Original strand, 26752307 - 26752542
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||| | ||||||| |||||||| ||||| || |||||||  ||||| || |||||||||||  | ||||| |||||| ||||||||||||||||    
T  26752307 cttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaaggctct 26752406  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| |||||||||| ||||||||||||||||||  | |||||   ||||||   ||||||||||||||||||||||||||||||||||||||||| |||    
T  26752407 tactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctaggatt 26752506  T
Q  271 tttattccaatattttctaccaactatgcatcttct 306  Q
    ||||||||  | ||||||| ||||||||| ||||||    
T  26752507 tttattcctgtgttttctatcaactatgcctcttct 26752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 73 - 308
Target Start/End: Complemental strand, 27605030 - 27604795
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| || || | ||||||||| || ||||| || || |||||||||||||||||||    
T  27605030 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 27604931  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || |||||||||| || |||||||||||||| ||| |||||| |||||||   |||||||||||| ||||  ||||||||||||| ||||| || |||||    
T  27604930 ctgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttt 27604831  T
Q  273 tattccaatattttctaccaactatgcatcttcttc 308  Q
    ||||||  | ||||||| ||| ||||| ||||||||    
T  27604830 tattcctgtgttttctatcaaatatgcctcttcttc 27604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 310
Target Start/End: Original strand, 26861476 - 26861715
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||  |||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  26861476 cttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggttttaccggtaatctctacaaggctct 26861575  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| |||||||||| ||||||||||| ||||||  | | |||| ||||||    ||||||| |  |||||||  ||| ||||||||||| |||||||||    
T  26861576 tactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaatgccattgaagagtctagaatt 26861675  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    || |||||  | |||||| |||||||||| ||||| ||||    
T  26861676 ttcattcctgtgttttctgccaactatgcctcttcgtcat 26861715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 27677941 - 27677702
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||| ||||| |||||||||  | ||  |||||||| ||||||| |||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  27677941 cttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctct 27677842  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |  | |||||||||||||||||||||||||  || || | |||| ||||||    |||||||||||||||||  |||||||||||||||| ||||| |||    
T  27677841 tgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatt 27677742  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    |||||| |  | ||||||| ||||||||| ||||||||||    
T  27677741 tttattgctgtgttttctatcaactatgcctcttcttcat 27677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 105 - 310
Target Start/End: Original strand, 25579613 - 25579818
Alignment:
Q  105 agtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgat 204  Q
    ||||||||||||||||||||| |||||||||||  |   ||| || || |||||||| |||||||||  | |||||||||| |  |||||| ||||||||    
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  205 aatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatctt 304  Q
    ||| |||||| |||||||   |||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 25579812  T
Q  305 cttcat 310  Q
    ||||||    
T  25579813 cttcat 25579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 93 - 310
Target Start/End: Complemental strand, 27531502 - 27531285
Alignment:
Q  93 attcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacacc 192  Q
    ||||||||||||||||||||||||||| || ||    ||||||||  | ||||| || |||||||||||||||||||||||| ||||||||||| | |||    
T  27531502 attcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatacc 27531403  T
Q  193 ttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctacca 292  Q
    ||||||||||| ||| |||||| |||||||   ||||||||||||||||| |  || ||||||||| ||||||| |||||||||||  ||||||||   |    
T  27531402 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaa 27531303  T
Q  293 actatgcatcttcttcat 310  Q
    ||||||||||||||||||    
T  27531302 actatgcatcttcttcat 27531285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 27706729 - 27706490
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||| ||||| |||||||||  | ||  |||||||| |||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||||| |    
T  27706729 cttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttt 27706630  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |  | |||||||||||||||||||||||||  || || | |||| |||| |    |||||||||||||||||  |||||||||||||||| ||||| |||    
T  27706629 tgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatt 27706530  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||  | ||||||| || |||||| ||||||||||    
T  27706529 tttattcctgtgttttctatcacctatgcctcttcttcat 27706490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 27338392 - 27338153
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||| |||||| ||| ||||  ||||| |||||||||||||| || |  | ||||||||  || ||||| || || |||||||||||||||||    
T  27338392 cttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctct 27338293  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    || | ||||||||||| | |||||||||||||| ||  |||||  |||||||   |||| ||||||||||||  |||||||||||||||| ||||| |||    
T  27338292 tattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggatt 27338193  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    || ||||| ||||||||| | |||||||||||||||||||    
T  27338192 ttgattcccatattttctgcaaactatgcatcttcttcat 27338153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 27399132 - 27398893
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||| |||||| ||| ||||  ||||| |||||||||||||| || |  | ||||||||  || ||||| || || |||||||||||||||||    
T  27399132 cttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctct 27399033  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    || | ||||||||||| | |||||||||||||| ||  |||||  |||||||   |||| ||||||||||||  |||||||||||||||| ||||| |||    
T  27399032 tattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggatt 27398933  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    || ||||| ||||||||| | |||||||||||||||||||    
T  27398932 ttgattcccatattttctgcaaactatgcatcttcttcat 27398893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 105 - 310
Target Start/End: Original strand, 26142759 - 26142964
Alignment:
Q  105 agtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgat 204  Q
    |||||||||||||||||| || |||||||||||  |    || || || |||||||| |||||||||  | |||||||||| |  || ||||||||||||    
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  205 aatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatctt 304  Q
    ||| |||||  |||||||   |||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 26142958  T
Q  305 cttcat 310  Q
    ||||||    
T  26142959 cttcat 26142964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 105 - 310
Target Start/End: Original strand, 25481636 - 25481841
Alignment:
Q  105 agtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgat 204  Q
    ||||||||||| |||||| || |||||||||||  |   ||| || || |||||||| |||||||||  | |||||||||| |  || |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  205 aatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatctt 304  Q
    ||| |||||| |||||||   |||||||||||||||||  |||||||||||||||||||||| |||| |||||| ||||||||| |||||||||||||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatctt 25481835  T
Q  305 cttcat 310  Q
    ||||||    
T  25481836 cttcat 25481841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 105 - 310
Target Start/End: Original strand, 25538434 - 25538639
Alignment:
Q  105 agtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgat 204  Q
    |||||||||||||||||| || |||||||||||  |    || || || |||||||| |||||||||  | ||||||||||    || ||||| ||||||    
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  205 aatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatctt 304  Q
    ||| |||||  |||||||   |||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatctt 25538633  T
Q  305 cttcat 310  Q
    ||||||    
T  25538634 cttcat 25538639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 105 - 310
Target Start/End: Original strand, 26055820 - 26056025
Alignment:
Q  105 agtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgat 204  Q
    ||||||||||| |||||| || |||||||||||  |   ||| || || |||||||| |||||||||  | ||||||||||  | || |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  205 aatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatctt 304  Q
    ||| |||||| |||||||   ||||||||| |||||||  |||||||||| ||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26056019  T
Q  305 cttcat 310  Q
    ||||||    
T  26056020 cttcat 26056025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 105 - 310
Target Start/End: Original strand, 26075790 - 26075995
Alignment:
Q  105 agtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgat 204  Q
    ||||||||||| |||||| || |||||||||||  |   ||| || || |||||||| |||||||||  | ||||||||||  | || |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  205 aatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatctt 304  Q
    ||| |||||| |||||||   ||||||||| |||||||  |||||||||| ||||||||| | ||||||||||| ||||||||| |||||||||||||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26075989  T
Q  305 cttcat 310  Q
    ||||||    
T  26075990 cttcat 26075995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 310
Target Start/End: Original strand, 26823683 - 26823939
Alignment:
Q  54 catggcaatgcaatcaccttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactgga 153  Q
    |||||| ||||| ||| ||||||||||| |||| ||||  ||||  ||||||||||| |||||||| |||||   ||||||||||||||  || || ||     
T  26823683 catggctatgcagtcaacttcctcttcagtttcatatgatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggc 26823782  T
Q  154 aatctctacaaggctcttactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggcca 253  Q
    ||||||||||||||||||||  |||||||||||||||||||  ||||||||  | | |||| ||||||     |||||  || ||||||||  || ||||    
T  26823783 aatctctacaaggctcttacagacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgcca 26823882  T
Q  254 ttgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||| ||||| |||||||||||  | |||||| |||||||||| ||||||||||    
T  26823883 ttgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcat 26823939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 310
Target Start/End: Original strand, 26048739 - 26048944
Alignment:
Q  105 agtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgat 204  Q
    |||||||||||||||||| || |||||||||||  |   ||| || || |||||||| |||||||| | | ||||||||||    || ||||||||||||    
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  205 aatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatctt 304  Q
    ||| |||||  |||||||   |||||||||||   |||  |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26048938  T
Q  305 cttcat 310  Q
    ||||||    
T  26048939 cttcat 26048944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 310
Target Start/End: Original strand, 26069908 - 26070113
Alignment:
Q  105 agtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgat 204  Q
    |||||||||||||||||| || |||||||||||  |   ||| || || |||||||| |||||||| | | ||||||||||    || ||||||||||||    
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  205 aatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatctt 304  Q
    ||| |||||  |||||||   |||||||||||   |||  |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26070107  T
Q  305 cttcat 310  Q
    ||||||    
T  26070108 cttcat 26070113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 308
Target Start/End: Original strand, 28325343 - 28325578
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||| ||||||||||||||||| ||  | |||||||| ||||| ||||| ||||||||||| |||||||| ||||||||||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     ||  ||| |||| |  |||||||||||||| ||  | |||| | ||||   |||||| ||||| |||||  |||||||||||||||| ||||| |||||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 28325542  T
Q  273 tattccaatattttctaccaactatgcatcttcttc 308  Q
     ||||| || || |||| ||| ||||| ||||||||    
T  28325543 cattcctattttgtctatcaattatgcttcttcttc 28325578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 76 - 310
Target Start/End: Original strand, 28234429 - 28234663
Alignment:
Q  76 tcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttacta 175  Q
    ||||| || |||||||||||||| ||  | |||||||| ||||| ||||| ||||||||||| |||||||| || | ||||||||| |  ||||||  |     
T  28234429 tcttctttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtc 28234528  T
Q  176 acaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 275  Q
    |||||||||||||||||||||||||||| |   | |||| | |||||   ||||| |||||||||||  |||||||||||||||| ||||| ||||| ||    
T  28234529 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 28234628  T
Q  276 tccaatattttctaccaactatgcatcttcttcat 310  Q
    |||  | || |||| ||| ||||| ||||||||||    
T  28234629 tcctgtcttgtctatcaattatgcttcttcttcat 28234663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 109 - 310
Target Start/End: Original strand, 28242702 - 28242903
Alignment:
Q  109 ttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgataatc 208  Q
    ||||| ||||| ||||| ||||||||||| |||||||| ||||||||||||||||| | ||||  ||| |||||||| | ||||||||||||||| |       
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  209 atcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttc 308  Q
    | |||||| ||||   | |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||  | || |||| ||| ||||| ||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28242901  T
Q  309 at 310  Q
    ||    
T  28242902 at 28242903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 310
Target Start/End: Original strand, 28226827 - 28227049
Alignment:
Q  88 tatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatcc 187  Q
    ||||||||||| ||  | |||||||| ||||| ||||| | ||||||||| |||||||| ||||||||||||||||  | ||||  ||| |||||||| |    
T  28226827 tatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattc 28226926  T
Q  188 acaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttc 287  Q
    |||| ||| |||||||||   | |||| | ||||    ||||| ||| |||||||  |||||| ||||||||||||||| ||||| |||||  | || ||    
T  28226927 acacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtc 28227026  T
Q  288 taccaactatgcatcttcttcat 310  Q
    || ||| ||||| ||||||||||    
T  28227027 tatcaattatgcttcttcttcat 28227049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 308
Target Start/End: Original strand, 28139415 - 28139638
Alignment:
Q  85 tcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaa 184  Q
    |||||||| ||||| ||| | || || ||||| |||||||| ||||||||||| |  ||||||||||||||||||||||| ||||||  | ||   ||||    
T  28139415 tcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaa 28139514  T
Q  185 tccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatatt 284  Q
    ||||||| || ||||||||||   | |||| | ||||   ||||||  |||| |||||| | || ||||||||||||||||| ||||| || ||  | ||    
T  28139515 tccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgtt 28139614  T
Q  285 ttctaccaactatgcatcttcttc 308  Q
    ||| | ||||||||| ||||||||    
T  28139615 ttccatcaactatgcctcttcttc 28139638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 310
Target Start/End: Original strand, 28185228 - 28185465
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||| || |||||||||||||| ||  | |||||||| || || ||||| ||||||||||| ||| |||| |||||||||||| | |  ||||||     
T  28185228 tcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagagctcttt 28185327  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     | ||||||||||||  |||||||| ||||| |   | |||| | ||||    ||||| ||| |||||||  |||||||||||||||| ||||| |||||    
T  28185328 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggatttt 28185427  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
     |||||  | || |||| ||| ||||| ||||||||||    
T  28185428 cattcccgtcttgtctatcaattatgcttcttcttcat 28185465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 28149952 - 28150036
Alignment:
Q  225 cgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||||||||||||| |||||||||||||||| || || ||||| |||||||| || |||| ||||||| | ||||||||||    
T  28149952 cgaaatcacaccatcactc-tcaaggccattgaagagtccaggattttcattccaatcttctctatcaactatacttcttcttcat 28150036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 310
Target Start/End: Original strand, 28180976 - 28181213
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||| || |||||||||||||| ||  | | |||||| || || |||||  |||||||||| |||||||| |||||||||||| | |  ||||||     
T  28180976 tcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagagctcttt 28181075  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     | ||||||||||||  |||||||| ||||| |   | |||| | ||||    ||||| ||| |||||||  |||||||||||||||| ||||| |||||    
T  28181076 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggatttt 28181175  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
     |||||  | || |||| ||| ||||| ||||||||||    
T  28181176 cattcccgtcttgtctatcaattatgcttcttcttcat 28181213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 27427751 - 27427694
Alignment:
Q  253 attgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||    
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcat 27427694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 27665385 - 27665312
Alignment:
Q  130 gacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatga 203  Q
    |||||||| | ||||||||| || || ||||| ||||||||| || |||| |||||||||||||||||||||||    
T  27665385 gacactcgatttggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatga 27665312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 270
Target Start/End: Original strand, 26949556 - 26949720
Alignment:
Q  106 gtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgata 205  Q
    |||||| | ||||||||||| |  |||||||| |  |||||||| || |||||||| || |||||  || ||||||||||||  ||||||||||||||||    
T  26949556 gtgttcattagtttcagaggtaccgacactcgattcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgata 26949655  T
Q  206 atcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |  | ||||  | |||   |||||||||||| |||||| |||||   ||||||||||| ||||||    
T  26949656 aggagcttcagaaaggtgacgaaatcacaccttcactcctcaagagaattgaagaatcgagaatt 26949720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 25507081 - 25507002
Alignment:
Q  226 gaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttc 305  Q
    ||||||||||||||| || |||  ||||||||||||||||| |||||||||||  |  |||||| ||||||||| |||||    
T  25507081 gaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttc 25507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 28098637 - 28098596
Alignment:
Q  130 gacactcggtatggtttcactggaaatctctacaaggctctt 171  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  28098637 gacactcggtatggttttactggaaatctctacaaagctctt 28098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 28298038 - 28297801
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||| || ||||||||||||||| |  | || ||||| ||||| ||||| |||||||| || ||  |||| | |||||||||| |||| | ||||     
T  28298038 tcctcttccttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatcttt 28297939  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     ||  |||||||| | ||||||||||||||| |   | |||  | ||||   |||||| |||||||||||  |||||  |||||||||  |||| |||||    
T  28297938 gtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggatttt 28297839  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
     |||||  | || |||||||| ||||| ||||||||||    
T  28297838 cattcctgtcttatctaccaattatgcttcttcttcat 28297801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 310
Target Start/End: Original strand, 28514035 - 28514272
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||| || ||||||||||||||| |  | || ||||| ||||| ||||| |||||||| || ||  |||| | |||||||||| |||| | ||||     
T  28514035 tcctcttccttctcctatggattcactcatgacgttttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatcttt 28514134  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     ||  |||||||| | ||||||||||||||| |   | |||  | ||||   |||||| |||||||||||  |||||  |||||||||  |||| |||||    
T  28514135 gtaggaagggaattcgcaccttcattgatgacagagagcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggatttt 28514234  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
     |||||  | || |||||||| ||||| ||||||||||    
T  28514235 cattcctgtcttatctaccaattatgcttcttcttcat 28514272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 308
Target Start/End: Original strand, 29825957 - 29826124
Alignment:
Q  141 tggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatca 240  Q
    |||||| || || ||||||||||| ||||| ||| |||||  ||| | ||||||||||||||| ||  | |||| ||||||   |||||||||||| |||    
T  29825957 tggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctca 29826056  T
Q  241 ctcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttc 308  Q
    ||  | ||||| ||| |||||||||| ||    ||||| || || |||||||| ||||| ||||||||    
T  29826057 cttgtgaaggcaattcaagaatctaggatagccattcctattttctctaccaattatgcttcttcttc 29826124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 26342105 - 26342024
Alignment:
Q  227 aaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttc 308  Q
    ||||||||| ||||||  |||| ||||||||||| || || ||||| |||||||| || || | ||||||||| ||||||||    
T  26342105 aaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttc 26342024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 26848592 - 26848652
Alignment:
Q  143 gtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatga 203  Q
    |||||||||| |||||||| || |||||| || |||| |||||||  ||||||||||||||    
T  26848592 gtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatga 26848652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 28491692 - 28491660
Alignment:
Q  226 gaaatcacaccatcactcatcaaggccattgaa 258  Q
    ||||||||||||||||||||||| |||||||||    
T  28491692 gaaatcacaccatcactcatcaaagccattgaa 28491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 29804102 - 29804070
Alignment:
Q  226 gaaatcacaccatcactcatcaaggccattgaa 258  Q
    ||||||||||||||||||||||| |||||||||    
T  29804102 gaaatcacaccatcactcatcaaagccattgaa 29804070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 131; Significance: 6e-68; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 3747 - 3509
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || || | |||||||||| | ||||| || ||||||||||||||||||||||    
T  3747 tcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctctta 3648  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| ||||||||||||| |||||||| |||||    
T  3647 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttt 3548  T
Q  273 tattccaatattttctaccaa-ctatgcatcttcttcat 310  Q
    ||||||  | ||||||| ||| |||||| ||||||||||    
T  3547 tattcctgtgttttctatcaacctatgcctcttcttcat 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 77 - 299
Target Start/End: Complemental strand, 14676 - 14454
Alignment:
Q  77 cttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaa 176  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || || | |||||||||| | ||||| || |||||||||||||||||||||||| |    
T  14676 cttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactga 14577  T
Q  177 caagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttatt 276  Q
    |||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  14576 caagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttatt 14477  T
Q  277 ccaatattttctaccaactatgc 299  Q
    ||  | ||||||| |||||||||    
T  14476 cctgtgttttctatcaactatgc 14454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 8126 - 8061
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcgg 138  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| || || | ||||||||||    
T  8126 tcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 310
Target Start/End: Complemental strand, 28128011 - 28127754
Alignment:
Q  54 catggcaatgcaatcaccttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactgga 153  Q
    |||||| |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||| ||||| || |||||||||||  | |||||||||||     
T  28128011 catggctatgcaatcacattcctcttcaatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggc 28127912  T
Q  154 aatctctacaaggctcttactaacaagggaatccacaccttcattgatgataatcatcttccaagagga-agcgaaatcacaccatcactcatcaaggcc 252  Q
     ||||||||||||| |||  | |||||||||||||||| ||||||||||||  | |||||   |||||| |   |||||||||| |||||  | ||||||    
T  28127911 catctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggcc 28127812  T
Q  253 attgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  28127811 attgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcat 28127754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 28164676 - 28164437
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||| || || |||||||||||  | |||||||||||  ||||||| ||||| ||    
T  28164676 cttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggccct 28164577  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |    |||||||||| ||||| ||||||||||||  | |||||   ||||||   ||||||||||| ||| ||||||||||||||||| ||||| |||||    
T  28164576 tgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaatt 28164477  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||  | || |||| ||||||||| ||||||||||    
T  28164476 tttattcctgtgttatctatcaactatgcctcttcttcat 28164437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 268671 - 268432
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||| | || ||||||||  | ||||| || |||||||  ||||||||  ||||||||||  | ||||| | |||  ||||||||||||||||    
T  268671 cttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgagggttttattggccatctctacaaggctct 268572  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| |||||||||||||||||||||||||||||  | | |||| ||||||    ||||||| ||||||||||  ||| ||||||||||| ||||| |||    
T  268571 tactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatt 268472  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||  | ||||||| ||||||||| ||||||||||    
T  268471 tttattcctgtgttttctatcaactatgcctcttcttcat 268432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 73 - 278
Target Start/End: Complemental strand, 4996 - 4791
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||  | ||||| || ||||||||||||||||||||||    
T  4996 tcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctctta 4897  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||| | |||||||||||||| ||| |||||| |||||||   |||||||||||||| |||  |||||||||||| |||||||| |||||    
T  4896 ctgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttt 4797  T
Q  273 tattcc 278  Q
    ||||||    
T  4796 tattcc 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 71 - 296
Target Start/End: Complemental strand, 13959 - 13734
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| || || | |||||||||  | ||||| || || |||||||||||||||||    
T  13959 cttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctct 13860  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| ||||||||||| | |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| |||||||||| ||||||||||| |||    
T  13859 tactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatt 13760  T
Q  271 tttattccaatattttctaccaacta 296  Q
    ||||||||  | ||||||| ||||||    
T  13759 tttattcctgtgttttctatcaacta 13734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 71 - 296
Target Start/End: Complemental strand, 244 - 19
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    |||||||||||||||| |||| ||||||||||||||||||||| ||||| || || | |||||||||  | ||||| || || |||||||||||||||||    
T  244 cttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctct 145  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| ||||||||||| | |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| |||||||||| ||||||||||| |||    
T  144 tactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatt 45  T
Q  271 tttattccaatattttctaccaacta 296  Q
    ||||||||  | ||||||| ||||||    
T  44 tttattcctgtgttttctatcaacta 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 71 - 296
Target Start/End: Original strand, 7385 - 7610
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    |||||||||||||||| |||| ||||||||||||||||||||| ||||| || || | |||||||||  | ||||| || || |||||||||||||||||    
T  7385 cttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctct 7484  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| ||||||||||| | |||||||||||||| ||| |||||| |||||||   |||||||||||||||||| |||||||||| ||||||||||| |||    
T  7485 tactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatt 7584  T
Q  271 tttattccaatattttctaccaacta 296  Q
    ||||||||  | ||||||| ||||||    
T  7585 tttattcctgtgttttctatcaacta 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 18724397 - 18724160
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||  | ||||| |||||  ||||||||||||||||||    
T  18724397 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctctta 18724298  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||||||||||||||||||||   | | || | ||||||    ||||||| ||||||||||  ||| ||||||||||| ||||| || ||    
T  18724297 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatctt 18724198  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
     |||||  | ||||||| ||||||||| ||||||||||    
T  18724197 cattcctgtgttttctatcaactatgcctcttcttcat 18724160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 75 - 310
Target Start/End: Complemental strand, 18679877 - 18679642
Alignment:
Q  75 ctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttact 174  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||  | ||||| |||||  ||||||||||||||||||||    
T  18679877 ctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttact 18679778  T
Q  175 aacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaattttta 274  Q
     |||| |||||||||||||||||||||||   | | || | ||||||    ||||||| ||||||||||  ||| ||||||||||| ||||| || || |    
T  18679777 gacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttca 18679678  T
Q  275 ttccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||  | ||||||| ||||||||| ||||||||||    
T  18679677 ttcctgtgttttctatcaactatgcctcttcttcat 18679642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 18655789 - 18655552
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||  | ||||| |||||  |||||||||| |||||||    
T  18655789 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctctta 18655690  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||||||||||||||||||||   | | || | ||| ||    ||||||| ||||||||||  ||| |||||| |||| ||||| || ||    
T  18655689 ctgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctt 18655590  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||  | ||||||| ||||||||| ||||||||||    
T  18655589 tattcctgtgttttctatcaactatgcctcttcttcat 18655552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 18731816 - 18731579
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||  | ||||| |||||  |||||||||  |||||||    
T  18731816 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctctta 18731717  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||||||||||||||||||||   | | || | ||||||    ||||||| ||||||||||  ||| ||||||||||| ||||| || ||    
T  18731716 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatctt 18731617  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
     |||||  | ||||||| ||||||||| ||||||||||    
T  18731616 cattcctgtgttttctatcaactatgcctcttcttcat 18731579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 18699712 - 18699475
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| || | |||||||||  | ||||| |||||  |||||||||| |||||||    
T  18699712 tcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctctta 18699613  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
    || ||||||||||||||||||||||||||||   | | || | ||| ||    ||||||| ||||||||||  ||| ||||||||||| ||||| || ||    
T  18699612 ctgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatctt 18699513  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
     |||||  | ||||||| ||||||||| ||||||||||    
T  18699512 cattcctgtgttttctatcaactatgcctcttcttcat 18699475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 17989185 - 17989128
Alignment:
Q  253 attgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||    
T  17989185 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcat 17989128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 18073804 - 18073861
Alignment:
Q  253 attgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||    
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcat 18073861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 310
Target Start/End: Complemental strand, 29274097 - 29273858
Alignment:
Q  71 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 170  Q
    ||||||||||| | || ||||||||||||||||| || |||||||  || |||||  ||||||||||  | ||||| | |||  ||||||||||| ||||    
T  29274097 cttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaagactct 29273998  T
Q  171 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 270  Q
    |||| |||||||||||||||||||||||||||||  | | |||| ||||||    ||||||| | ||||||||  ||| | ||||||||| |||||||||    
T  29273997 tactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattgaagagtctagaatt 29273898  T
Q  271 tttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||  | ||||||| ||||||||| ||||||||||    
T  29273897 tttattcctgtgttttctatcaactatgcctcttcttcat 29273858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 31903728 - 31903882
Alignment:
Q  88 tatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatcc 187  Q
    ||||||||||| ||| | ||||||||||| || |||||    |||||||| |||||||| ||||||||||||||||| ||||||  | | ||||||||||    
T  31903728 tatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatcc 31903827  T
Q  188 acaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcact 242  Q
    ||||||| ||||| ||| |  | |||| |||||||   |||||||||||||||||    
T  31903828 acacctttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 308
Target Start/End: Original strand, 116658 - 116893
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||| ||||||||||||||||| ||  | |||||||| ||||| ||||| ||||||||||| |||||||| ||||||||||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     ||  ||| |||| |  |||||||||||||| ||  | |||| | ||||   |||||| ||||| |||||  |||||||||||||||| ||||| |||||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 116857  T
Q  273 tattccaatattttctaccaactatgcatcttcttc 308  Q
     ||||| || || |||| ||| ||||| ||||||||    
T  116858 cattcctattttgtctatcaattatgcttcttcttc 116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 76 - 310
Target Start/End: Original strand, 34590 - 34824
Alignment:
Q  76 tcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttacta 175  Q
    ||||| || |||||||||||||| ||  | |||||||| ||||| ||||| ||||||||||| |||||||| || | ||||||||| |  ||||||  |     
T  34590 tcttctttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtc 34689  T
Q  176 acaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttat 275  Q
    |||||||||||||||||||||||||||| |   | |||| | |||||   ||||| |||||||||||  |||||||||||||||| ||||| ||||| ||    
T  34690 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 34789  T
Q  276 tccaatattttctaccaactatgcatcttcttcat 310  Q
    |||  | || |||| ||| ||||| ||||||||||    
T  34790 tcctgtcttgtctatcaattatgcttcttcttcat 34824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 109 - 310
Target Start/End: Original strand, 42864 - 43065
Alignment:
Q  109 ttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacaccttcattgatgataatc 208  Q
    ||||| ||||| ||||| ||||||||||| |||||||| ||||||||||||||||| | ||||  ||| |||||||| | ||||||||||||||| |       
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  209 atcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttc 308  Q
    | |||||| ||||   | |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||  | || |||| ||| ||||| ||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 43063  T
Q  309 at 310  Q
    ||    
T  43064 at 43065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 310
Target Start/End: Original strand, 27325 - 27547
Alignment:
Q  88 tatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatcc 187  Q
    ||||||||||| ||  | |||||||| ||||| ||||| | ||||||||| |||||||| ||||||||||||||||  | ||||  ||| |||||||| |    
T  27325 tatggattcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattc 27424  T
Q  188 acaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttc 287  Q
    |||| ||| |||||||||   | |||| | ||||    ||||| ||| |||||||  |||||| ||||||||||||||| ||||| |||||  | || ||    
T  27425 acacattctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtc 27524  T
Q  288 taccaactatgcatcttcttcat 310  Q
    || ||| ||||| ||||||||||    
T  27525 tatcaattatgcttcttcttcat 27547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 73 - 310
Target Start/End: Complemental strand, 58607 - 58370
Alignment:
Q  73 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 172  Q
    |||||||| || |||||||||||||| || || |||||||| || || |||||  |||||||||| |||||||| ||||||||||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  173 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 272  Q
     | ||||||||||||  |||||||| ||||| |   | |||| | ||||   |||||| |||||||||||  ||||||||||| |||| ||||| |||||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T
Q  273 tattccaatattttctaccaactatgcatcttcttcat 310  Q
     |||||  | || |||| ||||||||| ||||||||||    
T  58407 cattcccgtcttgtctatcaactatgcttcttcttcat 58370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 59612 - 59669
Alignment:
Q  253 attgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcat 310  Q
    ||||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||    
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcat 59669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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