View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13731_low_19 (Length: 222)
Name: NF13731_low_19
Description: NF13731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13731_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 41174533 - 41174344
Alignment:
| Q |
20 |
acaggaggatcatcaacatcaacacaagttaaactagtaggagaagagcatgaaaaagaaatttcaatggatgatatatggaaagatattgatctatcag |
119 |
Q |
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| T |
41174533 |
acaggaggatcatcaacatcaacacaagttaaactagtaggagaagagcatgaaaaagaaatttcaatggatgatatatggaaagatattgatctatcag |
41174434 |
T |
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| Q |
120 |
aagagaatagtctacagaatgaagagtgctgcaatattaataataacatatcttgtttaccaaagacttgttcatcatgggagtataatt |
209 |
Q |
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| T |
41174433 |
aagagaatagtctacagaatgaagagtgctgcaatattaataataacatatcttgtttaccaaagacttcttcatcatgggagtataatt |
41174344 |
T |
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