View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13732_high_16 (Length: 233)
Name: NF13732_high_16
Description: NF13732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13732_high_16 |
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Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 34284978 - 34284760
Alignment:
| Q |
5 |
accacttgtaaattttctcatgtggctaattctcattgaatgcattttttgcttcatttatttagatcatgatttttccttccacagtgcaaaacgaagc |
104 |
Q |
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| T |
34284978 |
accactagtaaattttatcatgtggctaattctcattgaatgcatttttttcttcttttatttagatcatgatttttccttccacagtgcaatacgaagc |
34284879 |
T |
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| Q |
105 |
ctaaggaagtgccaccttggattattgaagagttgttttggcagcagatgaagacaaacacacaattcatcatcctatactgaaagtaaatgcaagaacc |
204 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34284878 |
ctaaggaagtgccaccttggattattgatgagttgttttggcagcagatgaagacaaacacacaattcatcatcctatactgaaagtaaatgcaagaacc |
34284779 |
T |
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| Q |
205 |
aaactaatcatcaactaat |
223 |
Q |
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||||||||||||||||||| |
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| T |
34284778 |
aaactaatcatcaactaat |
34284760 |
T |
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