View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13732_low_11 (Length: 432)

Name: NF13732_low_11
Description: NF13732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13732_low_11
NF13732_low_11
[»] chr7 (74 HSPs)
chr7 (4-250)||(660761-661007)
chr7 (72-318)||(22069953-22070199)
chr7 (54-316)||(22080712-22080974)
chr7 (88-318)||(22063484-22063714)
chr7 (78-310)||(20351945-20352177)
chr7 (74-318)||(6864791-6865034)
chr7 (88-254)||(22100399-22100565)
chr7 (73-161)||(14076677-14076765)
chr7 (73-161)||(14386705-14386793)
chr7 (78-318)||(20374491-20374731)
chr7 (9-226)||(20133236-20133453)
chr7 (73-160)||(29454086-29454173)
chr7 (108-318)||(20361220-20361430)
chr7 (80-161)||(19344565-19344646)
chr7 (61-226)||(20338858-20339023)
chr7 (72-160)||(29921975-29922063)
chr7 (91-154)||(19604464-19604527)
chr7 (66-198)||(19351045-19351177)
chr7 (76-160)||(29867236-29867320)
chr7 (81-192)||(9807792-9807903)
chr7 (78-160)||(29859454-29859536)
chr7 (76-154)||(29874517-29874595)
chr7 (79-160)||(12819905-12819986)
chr7 (76-161)||(20058043-20058128)
chr7 (63-160)||(29430974-29431071)
chr7 (67-207)||(15571872-15572012)
chr7 (75-318)||(20140803-20141046)
chr7 (123-226)||(20361064-20361167)
chr7 (91-161)||(18952906-18952976)
chr7 (91-161)||(18982953-18983023)
chr7 (91-161)||(18997599-18997669)
chr7 (76-198)||(19357872-19357994)
chr7 (75-153)||(24385208-24385286)
chr7 (76-197)||(13416897-13417018)
chr7 (75-317)||(20126170-20126415)
chr7 (78-159)||(26217968-26218049)
chr7 (91-160)||(29106814-29106883)
chr7 (76-149)||(29881267-29881340)
chr7 (79-160)||(36263053-36263134)
chr7 (277-383)||(22088373-22088476)
chr7 (92-160)||(29899374-29899442)
chr7 (80-160)||(36260253-36260333)
chr7 (90-161)||(1985955-1986026)
chr7 (75-154)||(18514772-18514851)
chr7 (79-158)||(24002201-24002280)
chr7 (90-152)||(19645630-19645692)
chr7 (82-160)||(26256775-26256853)
chr7 (92-161)||(22028627-22028696)
chr7 (76-161)||(22520250-22520335)
chr7 (75-160)||(29476325-29476410)
chr7 (92-160)||(19722018-19722086)
chr7 (97-161)||(22021391-22021455)
chr7 (271-318)||(16839562-16839609)
chr7 (79-158)||(24010385-24010464)
chr7 (97-160)||(29445663-29445726)
chr7 (81-160)||(35205915-35205994)
chr7 (77-136)||(36255390-36255449)
chr7 (80-158)||(15443966-15444044)
chr7 (94-152)||(19597659-19597717)
chr7 (90-160)||(19637217-19637287)
chr7 (72-161)||(19325967-19326056)
chr7 (75-160)||(24391414-24391499)
chr7 (94-190)||(21218712-21218808)
chr7 (351-398)||(6865064-6865111)
chr7 (271-318)||(16846645-16846692)
chr7 (271-313)||(18326068-18326110)
chr7 (92-138)||(19374778-19374824)
chr7 (81-154)||(20410673-20410746)
chr7 (65-119)||(29460043-29460097)
chr7 (80-130)||(46769401-46769451)
chr7 (99-160)||(20414882-20414943)
chr7 (78-159)||(26230218-26230299)
chr7 (79-151)||(20495796-20495868)
chr7 (76-160)||(21210467-21210551)
[»] chr4 (19 HSPs)
chr4 (71-310)||(11970963-11971202)
chr4 (76-232)||(11981669-11981825)
chr4 (81-198)||(53774802-53774919)
chr4 (79-160)||(3565744-3565825)
chr4 (79-160)||(3557726-3557807)
chr4 (53-160)||(3560921-3561028)
chr4 (80-161)||(35767017-35767098)
chr4 (78-154)||(1686273-1686349)
chr4 (62-161)||(53790552-53790651)
chr4 (73-160)||(53430082-53430169)
chr4 (88-194)||(8443452-8443558)
chr4 (84-161)||(837775-837852)
chr4 (79-160)||(19361442-19361523)
chr4 (79-137)||(19359160-19359218)
chr4 (106-198)||(10464231-10464323)
chr4 (88-143)||(6113096-6113151)
chr4 (136-198)||(10475169-10475231)
chr4 (91-152)||(6392832-6392893)
chr4 (88-160)||(10482181-10482253)
[»] chr1 (10 HSPs)
chr1 (52-316)||(15961072-15961336)
chr1 (62-160)||(21855355-21855453)
chr1 (78-160)||(39379049-39379131)
chr1 (72-157)||(4014947-4015032)
chr1 (62-160)||(4366467-4366565)
chr1 (90-160)||(4570927-4570997)
chr1 (74-160)||(10218985-10219071)
chr1 (90-161)||(50645485-50645556)
chr1 (76-160)||(17560759-17560843)
chr1 (73-149)||(4016755-4016831)
[»] chr6 (13 HSPs)
chr6 (71-208)||(20770602-20770739)
chr6 (90-161)||(6921350-6921421)
chr6 (74-149)||(17369675-17369750)
chr6 (90-207)||(6947880-6947997)
chr6 (92-161)||(6954521-6954590)
chr6 (94-198)||(14749359-14749463)
chr6 (90-161)||(6935218-6935289)
chr6 (80-160)||(24950134-24950214)
chr6 (94-160)||(6942971-6943037)
chr6 (92-161)||(24254428-24254497)
chr6 (109-158)||(5979029-5979078)
chr6 (109-158)||(33576172-33576221)
chr6 (94-154)||(30399129-30399189)
[»] scaffold0867 (1 HSPs)
scaffold0867 (88-254)||(4667-4833)
[»] chr5 (7 HSPs)
chr5 (62-160)||(24330871-24330969)
chr5 (73-154)||(18964813-18964894)
chr5 (69-191)||(29597531-29597653)
chr5 (82-198)||(29647638-29647754)
chr5 (69-161)||(29642358-29642450)
chr5 (109-158)||(23086784-23086833)
chr5 (76-161)||(28763891-28763976)
[»] chr2 (18 HSPs)
chr2 (79-209)||(18908798-18908928)
chr2 (79-161)||(18913546-18913628)
chr2 (79-161)||(18920754-18920836)
chr2 (72-157)||(14514903-14514988)
chr2 (90-208)||(554428-554546)
chr2 (89-194)||(25377040-25377145)
chr2 (111-160)||(20699461-20699510)
chr2 (88-161)||(20975557-20975630)
chr2 (79-155)||(2576887-2576963)
chr2 (80-154)||(2596013-2596087)
chr2 (99-160)||(20980604-20980665)
chr2 (100-153)||(21021279-21021332)
chr2 (91-155)||(2581323-2581387)
chr2 (140-207)||(1826329-1826395)
chr2 (113-160)||(20712556-20712603)
chr2 (94-160)||(20967700-20967766)
chr2 (106-160)||(25698507-25698561)
chr2 (89-129)||(537859-537899)
[»] chr3 (3 HSPs)
chr3 (62-154)||(3625740-3625832)
chr3 (88-161)||(25901277-25901350)
chr3 (88-161)||(25915295-25915368)
[»] chr8 (3 HSPs)
chr8 (78-194)||(27618457-27618573)
chr8 (88-158)||(29390288-29390358)
chr8 (91-154)||(29157054-29157117)
[»] scaffold0649 (1 HSPs)
scaffold0649 (88-160)||(5438-5510)
[»] scaffold0354 (1 HSPs)
scaffold0354 (78-152)||(7471-7545)
[»] scaffold0242 (2 HSPs)
scaffold0242 (75-160)||(13715-13800)
scaffold0242 (75-160)||(22550-22635)
[»] scaffold0064 (1 HSPs)
scaffold0064 (76-159)||(24206-24289)
[»] scaffold0097 (1 HSPs)
scaffold0097 (113-160)||(16395-16442)


Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 250
Target Start/End: Original strand, 660761 - 661007
Alignment:
Q  4 aatagtgtatcattcttctccgaaagacgtattgttgacacataaaagttcaagtaattaaagttattatctatttgaagattatgataactaattttaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  660761 aatagtgtatcattcttctccgaaagacgtattgttgacacataaaagttcaagtaattaaagttattatctatttgaagattatgataactaattttaa 660860  T
Q  104 ggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaa 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||    
T  660861 ggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaacgagtttgtttgaaatcgtgacaaaaacaaagacaatcctttaa 660960  T
Q  204 cacacttagatttggtataacaaatggcatttcttggaaacctcgag 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  660961 cacacttagatttggtataacaaatggcatttcttggaaacctcgag 661007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 72 - 318
Target Start/End: Complemental strand, 22070199 - 22069953
Alignment:
Q  72 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttg 171  Q
    ||||||||| ||||| | |||||||||||| |  ||  ||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| | | |||||    
T  22070199 atctatttggagattcttataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagttcgtttg 22070100  T
Q  172 aaatcgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcg 271  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||  ||||||| |  |||| || ||| |    
T  22070099 aaatcatgagaaaaacaaagacaatcctttaaaacacttagatttggtataacaaatggcacttcatcgaaaccgtgaggaggcaacaacttagtatgtg 22070000  T
Q  272 tctcggtgcccaaattaagtgaaataatcacaaattgctcaatagta 318  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  22069999 tctcggtacccaaatcaagtgaaataatcacaaattcctcaatagta 22069953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 54 - 316
Target Start/End: Complemental strand, 22080974 - 22080712
Alignment:
Q  54 caagtaattaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatata 153  Q
    |||||||||||||  || ||||||||| ||||| |||||||||||||| |  ||  ||||||||||||||| ||||| ||||| |||||| |||||||||    
T  22080974 caagtaattaaagggatgatctatttggagattctgataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatata 22080875  T
Q  154 acaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggag 253  Q
    | |||||| | |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| || | |||   |||||   ||||||    
T  22080874 ataaaatgagtttgtttgaaatcatgagaaaaacaaagacaatcctttaacatacttagatttggtataacaaagggaacttcaacgaaactgtgaggag 22080775  T
Q  254 ggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaattgctcaatag 316  Q
    |  | |||| || ||| |||||||||||||||| |||||||||||||| |||||| |||||||    
T  22080774 gccgaaacttagcatgtgtctcggtgcccaaatcaagtgaaataatcataaattgttcaatag 22080712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 88 - 318
Target Start/End: Complemental strand, 22063714 - 22063484
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaac 187  Q
    |||||||||||||| |  || |||||||||||||||| || || |||||||||||| ||||||||||||||||| | |||||||||||| ||| ||||||    
T  22063714 tgataactaattttgaataactgagtccaagactcttgaaatccaaattccttcatttgccatataacaaaatgagtttgtttgaaatcatgaaaaaaac 22063615  T
Q  188 aaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaatt 287  Q
    ||||| |||| ||||| |||||||| ||||||||||||||||| | |||   ||||||  ||||||| |  || | || ||  | ||| ||||||||||     
T  22063614 aaagataatcatttaagacacttagttttggtataacaaatggtacttcactgaaaccatgaggaggaaacaatttagtatatgcctcagtgcccaaatc 22063515  T
Q  288 aagtgaaataatcacaaattgctcaatagta 318  Q
    |||||||||||||||||||||| ||||||||    
T  22063514 aagtgaaataatcacaaattgcccaatagta 22063484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 78 - 310
Target Start/End: Complemental strand, 20352177 - 20351945
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcg 177  Q
    ||||||||||| ||||||||||||||  | ||||||||| || |||||||||| |||||||||||| | |||||| |||||||| | ||||||| ||||     
T  20352177 ttgaagattatcataactaattttaaaaagttgagtccatgaatcttcaactccaaattccttcatttcccatattacaaaatgagtttgtttgtaatca 20352078  T
Q  178 tgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcgg 277  Q
    ||  ||||||||||||||||||||||||||||||||| ||||| ||| | ||||| ||||  ||||||| |||| || |  | |  ||||||||| || |    
T  20352077 tgtgaaaaacaaagacaatcctttaacacacttagatatggtacaacgattggcacttctgtgaaaccttgaggtggcaaaagcagagaatgcgtttcag 20351978  T
Q  278 tgcccaaattaagtgaaataatcacaaattgct 310  Q
    || |||||| ||| ||||| |||||||||||||    
T  20351977 tgtccaaatcaagagaaatgatcacaaattgct 20351945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 74 - 318
Target Start/End: Original strand, 6864791 - 6865034
Alignment:
Q  74 ctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaa 173  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||   |||||| || ||||| | |||||||||    
T  6864791 ctatttgaagattatgataactagttttaaggaactgagtccaagactcttcaactccaaattccttcattaaccatattac-aaatgagtttgtttgaa 6864889  T
Q  174 atcgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagg-gagtaactcagaatgcgt 272  Q
    ||| ||| ||||| | ||||||||||||||||| |||||||||||   ||||| ||||| |||   ||||||  ||||||| ||  |||  || |||  |    
T  6864890 atcatgagaaaaatagagacaatcctttaacacgcttagatttggggcaacaattggcacttcaatgaaaccctgaggaggagacaaac-gagtatgtat 6864988  T
Q  273 ctcggtgcccaaattaagtgaaataatcacaaattgctcaatagta 318  Q
    ||  ||| |||||| ||||||||||||| |||||||||||||||||    
T  6864989 cttagtgtccaaatgaagtgaaataatctcaaattgctcaatagta 6865034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 88 - 254
Target Start/End: Complemental strand, 22100565 - 22100399
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaac 187  Q
    |||||||||||||| |  || |||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| | || ||||||||| ||| ||||||    
T  22100565 tgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaaaaac 22100466  T
Q  188 aaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagg 254  Q
    ||||| |||| ||||| ||||||||||| |||||||||| ||||| ||| | ||||||  |||||||    
T  22100465 aaagataatcatttaagacacttagattaggtataacaattggcacttcattgaaaccatgaggagg 22100399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 14076765 - 14076677
Alignment:
Q  73 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||| |||||    
T  14076765 tctatttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14076677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 14386793 - 14386705
Alignment:
Q  73 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||| |||||    
T  14386793 tctatttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14386705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 78 - 318
Target Start/End: Original strand, 20374491 - 20374731
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcg 177  Q
    ||||||||||| ||||||||||||||  | |||| |||| || ||| |||||| |||||||||||| | |||||| |||||||| | ||||||| ||||     
T  20374491 ttgaagattattataactaattttaaaaagttgaatccatgaatctccaactccaaattccttcatttcccatattacaaaatgagtttgtttgtaatca 20374590  T
Q  178 tgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcgg 277  Q
    ||  ||||||||||||||||||||| ||||||||||| ||||  |||||  |||| |||   ||| ||| ||||||| |  | || |||||| || || |    
T  20374591 tgtgaaaaacaaagacaatcctttagcacacttagatatggtgcaacaatcggcacttccatgaagccttgaggaggcaaaagctgagaatgtgtttcag 20374690  T
Q  278 tgcccaaattaagtgaaataatcacaaattgctcaatagta 318  Q
    | ||||||| ||| |||||||| | |||||||| |||||||    
T  20374691 tacccaaatcaagagaaataatgataaattgctgaatagta 20374731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 226
Target Start/End: Original strand, 20133236 - 20133453
Alignment:
Q  9 tgtatcattcttctccgaaagacgtattgttgacacataaaagttcaagtaattaaagttattatctatttgaagattatgataactaattttaaggaat 108  Q
    ||||||| ||||||||||||| | || || | ||||   ||||||||| | |||||||| || || |||||||||||| ||||| ||||| ||||  ||     
T  20133236 tgtatcactcttctccgaaaggcataatggtaacacccgaaagttcaaatcattaaagtgatcatatatttgaagattgtgatagctaatgttaaataac 20133335  T
Q  109 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacac 208  Q
    ||| ||||||| |||||||||| |||||| ||||| |||||||  || ||||| | ||||||| |||| ||  ||||||| |  ||||||||||||| ||    
T  20133336 tgaatccaagaatcttcaactccaaattctttcatttgccatactaccaaatgagtttgtttgtaatcatgtgaaaaacacatgcaatcctttaacaaac 20133435  T
Q  209 ttagatttggtataacaa 226  Q
    |||||| ||||| |||||    
T  20133436 ttagatatggtacaacaa 20133453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 29454086 - 29454173
Alignment:
Q  73 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||| |||||||||| ||||| | ||||| |||||||||||||||    
T  29454086 tctatttgaagatcttgataactaattttaaagaattgagtccaagaatcttcaactccaaatttcatcatccgccatataacaaaat 29454173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 108 - 318
Target Start/End: Original strand, 20361220 - 20361430
Alignment:
Q  108 ttgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacaca 207  Q
    ||||| ||| || |||||||||| ||||||||| || | | | || |||||||| | ||||||| |||| ||  ||||||||||||||||||||| ||||    
T  20361220 ttgagaccatgaatcttcaactccaaattcctttatttcctaaatcacaaaatgagtttgtttgtaatcatgtgaaaaacaaagacaatcctttagcaca 20361319  T
Q  208 cttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaatt 307  Q
    ||||||| ||||| ||||| ||||| |||   ||||||| |||| || |  |  | |||| |||| ||||||||||||| ||| ||||| ||||||||||    
T  20361320 cttagatatggtacaacaattggcacttccgtgaaaccttgaggtggcaaaagttgagaaagcgtttcggtgcccaaatcaagagaaatgatcacaaatt 20361419  T
Q  308 gctcaatagta 318  Q
    | | |||||||    
T  20361420 gatgaatagta 20361430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 19344565 - 19344646
Alignment:
Q  80 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||| ||| ||||||||||||| |||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||    
T  19344565 gaagattctgaaaactaattttaagaaattgagtccaagattgttcaactccaaattccatcatctgccatataacaaaatg 19344646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 20339023 - 20338858
Alignment:
Q  61 ttaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||| || || ||||||||||||||  ||||| |||| || || |||||||||||| ||||||||||  ||||||||||| | |||||| |||||||    
T  20339023 ttaaagtgatcatatatttgaagattattgtaactgatttgaaagagttgagtccaagaatcttcaactcctaattccttcattttccatattacaaaat 20338924  T
Q  161 gtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaa 226  Q
    | | || || | |||| ||  ||||||||||| | || ||||||||||||| |||||||| |||||    
T  20338923 gagttttttggtaatcatgggaaaaacaaagatagtcgtttaacacacttaaatttggtacaacaa 20338858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 29921975 - 29922063
Alignment:
Q  72 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||| ||||||| |||||||||||| |||||||||||| |||||| |||||| | | ||||| |||||||||||||||||||||||    
T  29921975 atctattagaagattttgataactaattctaaggaattgagaccaagaatcttcatccccaaatttcttcatctgccatataacaaaat 29922063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 19604464 - 19604527
Alignment:
Q  91 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    |||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  19604464 taactaattttaaggaattgagtccaggagtcttcaactccaaattccttcatctgccatataa 19604527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 19351045 - 19351177
Alignment:
Q  66 gttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgat 165  Q
    ||||| ||| || |||||||  ||| |||||||||| |||||| ||||||||||||| ||||||| ||||||| |||||||||||| ||||||||| |      
T  19351045 gttataatcaatgtgaagatcctgaaaactaattttgaggaatggagtccaagactcctcaactccaaattccatcatctgccataaaacaaaatgggtc 19351144  T
Q  166 tgtttgaaatcgtgacaaaaacaaagacaatcc 198  Q
      ||||| || |||| ||||||| |||||||||    
T  19351145 cttttgagattgtgagaaaaacatagacaatcc 19351177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 29867320 - 29867236
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |  |||| |||||| |||||||||| |||||    
T  29867320 atttgaagattatggtaactaattctaaggaattgagtccaagaatcttcaaccccgaatttcttcatttgccatataataaaat 29867236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 9807903 - 9807792
Alignment:
Q  81 aagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtga 180  Q
    |||||| |||||| ||||| |||||| ||   |||||||||||||||||| |||||||||||||||||||||||| ||||  | ||  || ||||| |||    
T  9807903 aagattctgataattaattgtaaggagtttcatccaagactcttcaactccaaattccttcatctgccatataacgaaatcggttttcttcaaatcatga 9807804  T
Q  181 caaaaacaaaga 192  Q
    ||||||||||||    
T  9807803 caaaaacaaaga 9807792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 29859536 - 29859454
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||||| ||||||||||||||||| ||| | |||||||| |||||||||| ||||| |||||||| ||||||||| ||||    
T  29859536 ttgaagattgtgataactaattttaagaaatggggtccaagaatcttcaactccaaatttcttcatctcccatataacgaaat 29859454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 29874595 - 29874517
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||| |||||||| | ||||| |||||| ||||||||||    
T  29874595 atttgaagattttgataactaattttaagtaatggagtccaagaatcttcaaccccaaatttcttcatttgccatataa 29874517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 12819905 - 12819986
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||| ||| |||| |||||||||||||||||||| || | |||||||| ||||||| |||||||||||| ||||||||    
T  12819905 tgaagattctgacaactgattttaaggaattgagtccaggattgttcaactccaaattccgtcatctgccatacaacaaaat 12819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 20058043 - 20058128
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||| | ||||||||||||||| ||||||  |||||||||||||||||  ||||||| ||| | |||||||||||||||    
T  20058043 atttgaagattttcataactaattttaagaaattgacaccaagactcttcaactctgaattcctccattttccatataacaaaatg 20058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 29430974 - 29431071
Alignment:
Q  63 aaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||| || ||||||||||||||  ||||||||||||||||||||||| |||||||| |||| | | | ||||| | ||||| |||||||||||||||    
T  29430974 aaagtcataatctatttgaagatcctgataactaattttaaggaattgggtccaagaatctttagccccaaatttcatcatccgccatataacaaaat 29431071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 15571872 - 15572012
Alignment:
Q  67 ttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgatt 166  Q
    |||| ||| |||||||||||   ||||||||||||| ||||||||  ||||||||||||||||| ||| ||| |||| ||||| || |||||||| | |     
T  15571872 ttataatccatttgaagatttgaataactaattttatggaattgaacccaagactcttcaactccaaactccctcatttgccacatgacaaaatgggttc 15571971  T
Q  167 gtttgaaatcgtgacaaaaacaaagacaatcctttaacaca 207  Q
      |||||||| | | ||||||||||||||||| | ||||||    
T  15571972 ccttgaaatcataagaaaaacaaagacaatccataaacaca 15572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 75 - 318
Target Start/End: Original strand, 20140803 - 20141046
Alignment:
Q  75 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaa 174  Q
    |||||||||||| ||||| ||||| ||||  |  ||| ||||||| | |||||||| |||||||||||| |||||||  || ||||| | ||||||| ||    
T  20140803 tatttgaagattgtgatagctaatgttaaaaagctgaatccaagaattttcaactccaaattccttcatttgccatactaccaaatgagtttgtttgtaa 20140902  T
Q  175 tcgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtct 274  Q
    || |   |||||||||||   |||||||||| |||||||| ||||| || ||  || | ||||  |||||||  ||||||    |  | |||||| ||||    
T  20140903 tcatatgaaaaacaaagattgtcctttaacaaacttagatatggtacaaaaatcgggacttctctgaaacctataggaggcgaaagttgagaatgtgtct 20141002  T
Q  275 cggtgcccaaattaagtgaaataatcacaaattgctcaatagta 318  Q
    |||||||||||| ||| |||| |||||||||||| |||| ||||    
T  20141003 cggtgcccaaataaagagaaacaatcacaaattggtcaagagta 20141046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 20361167 - 20361064
Alignment:
Q  123 ttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacacttagatttggtata 222  Q
    |||||||| |||||||||||| |  ||||  |||||||| | ||||||| |||| ||  |||||||||||||||||| |||||||||||||| ||||| |    
T  20361167 ttcaactccaaattccttcatttctcataatacaaaatgagtttgtttgtaatcatgtgaaaaacaaagacaatcctctaacacacttagatatggtaca 20361068  T
Q  223 acaa 226  Q
    ||||    
T  20361067 acaa 20361064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 18952906 - 18952976
Alignment:
Q  91 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||| | ||||||    
T  18952906 taactaattttaaggaactgagtccatgacttgtcaactccaaattccttcatctgccatatgataaaatg 18952976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 18982953 - 18983023
Alignment:
Q  91 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||| | ||||||    
T  18982953 taactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatatgataaaatg 18983023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 18997599 - 18997669
Alignment:
Q  91 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||| | ||||||    
T  18997599 taactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatatgataaaatg 18997669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 198
Target Start/End: Complemental strand, 19357994 - 19357872
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaat 175  Q
    ||||||||||  ||| |||||||||| | |||||||||||||||||||| ||||| ||||||| |||||| ||||| ||| ||||| |    ||||||||    
T  19357994 atttgaagatcctgaaaactaatttttaagaattgagtccaagactcttgaactccaaattccatcatcttccataaaacgaaatgggtccctttgaaat 19357895  T
Q  176 cgtgacaaaaacaaagacaatcc 198  Q
     |||| ||||||| |||| ||||    
T  19357894 agtgagaaaaacatagactatcc 19357872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 24385286 - 24385208
Alignment:
Q  75 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatata 153  Q
    ||||||||||||||||| |||||||||||| ||| || ||||||||| |||||||| ||| | |||||||| |||||||    
T  24385286 tatttgaagattatgatgactaattttaagaaatcgactccaagacttttcaactccaaagttcttcatcttccatata 24385208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 13416897 - 13417018
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaat 175  Q
    ||||||| |||  ||||||||||||||| ||||| |  ||||||||||||||||| |||||||||||| |||||||| | |||||  | ||  || ||||    
T  13416897 atttgaaaatttagataactaattttaacgaattcaacccaagactcttcaactccaaattccttcatttgccatatgataaaataggttttcttaaaat 13416996  T
Q  176 cgtgacaaaaacaaagacaatc 197  Q
    | | | ||||||||||||||||    
T  13416997 cataagaaaaacaaagacaatc 13417018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 317
Target Start/End: Original strand, 20126170 - 20126415
Alignment:
Q  75 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaa 174  Q
    ||||||||||||| | ||||| |||| ||| |||||| ||||||| ||||||  || |||||| ||||| |  ||||| |||||||| | ||||  | ||    
T  20126170 tatttgaagattaaggtaactgatttaaag-aattgattccaagaatcttcatatccaaattctttcattttacatattacaaaatgagtttgtacgtaa 20126268  T
Q  175 tcgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatg----gcatttcttggaaacctcgaggagggagtaactcagaatgc 270  Q
    || ||   |||||||||||| |||||||||||||||| |||||||| |||||  |    | | |||   ||||||| |||| || || | || ||||||     
T  20126269 tcatggggaaaacaaagacagtcctttaacacacttatatttggtacaacaatcgctacgtacttcagtgaaaccttgaggtggcagaagctgagaatgt 20126368  T
Q  271 gtctcggtgcccaaattaagtgaaataatcacaaattgctcaatagt 317  Q
    ||||| |||||||| | ||| ||||||||||||||||||| ||||||    
T  20126369 gtctcagtgcccaagtcaagggaaataatcacaaattgctgaatagt 20126415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 26218049 - 26217968
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 159  Q
    |||||||||||| |||||||| ||||  ||||||| ||||||||||| ||||| | | |||||||||||||||| |||||||    
T  26218049 ttgaagattatggtaactaatcttaaataattgagaccaagactcttgaactccatactccttcatctgccataaaacaaaa 26217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 29106883 - 29106814
Alignment:
Q  91 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||||  | ||||||||||||||||||||| | ||||| |||||||||||||| ||||||||    
T  29106883 taactaattttaaaaagttgagtccaagactcttcaaccccaaatttcttcatctgccatacaacaaaat 29106814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 29881340 - 29881267
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 149  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||| |||||||| | ||||| |||||| |||||    
T  29881340 atttgaagactatggtaactaattctaaggaattgagtccaagaatcttcaaccccaaatttcttcatttgcca 29881267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 36263134 - 36263053
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||| | ||| |||| ||||| || ||||||||||||||||||||||| |||||| | ||||| ||||||||||||||    
T  36263134 tgaagattttcatagctaactttaatgagttgagtccaagactcttcaactccaaattcttccatcttccatataacaaaat 36263053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 383
Target Start/End: Complemental strand, 22088476 - 22088373
Alignment:
Q  277 gtgcccaaattaagtgaaataatcacaaattgctcaatagtatcaatatccttgcattcgtagtcctcgtcgttgtaattgcgaattgccaaccaattaa 376  Q
    |||||||||| ||||||||||||||||||||||||||||||   |||| ||||||| |  || || ||  |  |||||||| ||||||||||||||||||    
T  22088476 gtgcccaaatcaagtgaaataatcacaaattgctcaatagt---aatacccttgcaattataatcatcaccaatgtaattgtgaattgccaaccaattaa 22088380  T
Q  377 aactacc 383  Q
     ||||||    
T  22088379 cactacc 22088373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 29899442 - 29899374
Alignment:
Q  92 aactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||| |  ||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  29899442 aactaatttttaaaaattgagtccaggactcttcaaccccaaatttcttcatctgccatataacaaaat 29899374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 36260333 - 36260253
Alignment:
Q  80 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||| ||||| ||||||||||  | |||| |||||||||||||||||| |||||| | ||||| ||||||||||||||    
T  36260333 gaagattttgatagctaattttaataagttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaat 36260253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 1985955 - 1986026
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||||||  |||||||||||||| |||||||| | |||||||||||| ||||| | |||||||||    
T  1985955 ataactaattttaaacaattgagtccaagattcttcaacgccaaattccttcatttgccaaagaacaaaatg 1986026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 154
Target Start/End: Original strand, 18514772 - 18514851
Alignment:
Q  75 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    ||||||||||||   |||||||||||||||||||||||||||||| | |||||||| |||||| | ||| | ||||||||    
T  18514772 tatttgaagattcatataactaattttaaggaattgagtccaagagttttcaactccaaattcgtccattttccatataa 18514851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 24002280 - 24002201
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 158  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||| |||||   | |||||||| ||||||| ||||||    
T  24002280 tgaagattctgataactaatcttaagtaattgagtccaagactcttgaactccgtactccttcatatgccataaaacaaa 24002201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 19645630 - 19645692
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 152  Q
    ||||||||||||||| ||  ||||||| |||||||||| || |||||||||||||||||||||    
T  19645630 ataactaattttaagtaacagagtccatgactcttcaattccaaattccttcatctgccatat 19645692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 26256853 - 26256775
Alignment:
Q  82 agattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||| || ||||| ||||  ||||||||||||||||||| ||||| | | |||||||||||||||| ||||||||    
T  26256853 agattatggtagctaatcttaaataattgagtccaagactcttgaactccatactccttcatctgccataaaacaaaat 26256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 22028696 - 22028627
Alignment:
Q  92 aactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||| ||||| ||||||||||||||||||||||||| | | ||| |||| | |||||||||||||||    
T  22028696 aactaatcttaagtaattgagtccaagactcttcaactccataatccgtcattttccatataacaaaatg 22028627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 22520250 - 22520335
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||| | ||||||||||| ||| | | |||||||||||||| |||||| ||| ||| |||| ||||||| |||||||||    
T  22520250 atttgaagattctcataactaatttgaagcagtggagtccaagactctacaactctaaaatccatcatatgccataaaacaaaatg 22520335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 29476325 - 29476410
Alignment:
Q  75 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||| |||||||| |||||||| |||||||||||||| |  |||   |  |||||||||||||||||||||| |||||    
T  29476325 tatttgaagattttgataacttattttaagaaattgagtccaagagttgtcattccctaattccttcatctgccatataagaaaat 29476410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 19722086 - 19722018
Alignment:
Q  92 aactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||| ||||| ||||||||||||||||| |||| ||||| ||||||| |||||| ||||| ||||||||    
T  19722086 aactgattttgaggaattgagtccaagaatcttgaactccaaattccatcatcttccataaaacaaaat 19722018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 22021455 - 22021391
Alignment:
Q  97 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||| |||||||||||||| |||||||||| | | ||| |||||||||||||||| |||||    
T  22021455 attttaagtaattgagtccaagattcttcaactccataatccatcatctgccatataaccaaatg 22021391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 16839562 - 16839609
Alignment:
Q  271 gtctcggtgcccaaattaagtgaaataatcacaaattgctcaatagta 318  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  16839562 gtctccgtgcccaaatcaagtgaaataatcacaaattgctcaacagta 16839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 24010464 - 24010385
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 158  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||| ||| |   | |||||||| ||||||| ||||||    
T  24010464 tgaagattctgataactaatcttaagtaattgagtccaagactcttgaaccccgtactccttcatatgccataaaacaaa 24010385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 29445663 - 29445726
Alignment:
Q  97 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||| || |||||||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  29445663 atttttagaaattgagtccaagagtcttcaacccctaattccttcatctgccatataagaaaat 29445726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 35205915 - 35205994
Alignment:
Q  81 aagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||| ||||| |||| |||||||||||||||||||||||  |||  || ||||||  |||||| ||||||||||||||    
T  35205915 aagattgtgatagctaaatttaaggaattgagtccaagacttgtcatttccaaattctgtcatcttccatataacaaaat 35205994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 36255449 - 36255390
Alignment:
Q  77 tttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaatt 136  Q
    |||||||||| ||||| |||| ||||| || ||||||||||||||||||||||| |||||    
T  36255449 tttgaagattttgatagctaactttaatgagttgagtccaagactcttcaactccaaatt 36255390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 15444044 - 15443966
Alignment:
Q  80 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 158  Q
    ||||||| || ||||| || ||||  ||||||||||||||||||||||||| | | |||||||| ||||||| ||||||    
T  15444044 gaagattctggtaactcatcttaaataattgagtccaagactcttcaactccatactccttcatatgccataaaacaaa 15443966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 19597659 - 19597717
Alignment:
Q  94 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 152  Q
    |||||||| || || |||||||| ||||||||||||  |||||||||||||||||||||    
T  19597659 ctaattttgagaaactgagtccatgactcttcaacttcaaattccttcatctgccatat 19597717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 19637217 - 19637287
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||||||||   || |||| ||||||| ||||| |||||||||||| |||||||||| |||||    
T  19637217 ataactaattttaaggagccgaatccacgactcttgaactccaaattccttcatttgccatataataaaat 19637287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 19325967 - 19326056
Alignment:
Q  72 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||| ||||| ||| ||| |||| ||||| | ||||||||||||||| | ||| |||| |||||||  ||| |||||||||||||||||    
T  19325967 atctacttgaacattctgaaaactgattttgatgaattgagtccaagattgttctactccaaattccgacatatgccatataacaaaatg 19326056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 24391499 - 24391414
Alignment:
Q  75 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||||| || |||||| ||||| |||||| ||||| | | |||||||| ||| | |||||||| ||||| ||||||||    
T  24391499 tatttgaagattatcattactaatgttaagaaattgactccaacatttttcaactccaaagttcttcatcttccataaaacaaaat 24391414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 21218712 - 21218808
Alignment:
Q  94 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaa 190  Q
    |||| ||| |||||||||||||||||||  ||| ||| ||||||| |||| ||||||||||| ||||  | |   |||||||||||| |||||||||    
T  21218712 ctaaatttgaggaattgagtccaagacttatcatctccaaattccgtcatttgccatataaccaaatcagttccattgaaatcgtgataaaaacaaa 21218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 6865064 - 6865111
Alignment:
Q  351 gtaattgcgaattgccaaccaattaaaactaccactaagatgaacaac 398  Q
    |||||||||||||||||||||| ||| |||||||| |||||| |||||    
T  6865064 gtaattgcgaattgccaaccaagtaacactaccaccaagatgcacaac 6865111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 16846645 - 16846692
Alignment:
Q  271 gtctcggtgcccaaattaagtgaaataatcacaaattgctcaatagta 318  Q
    ||||| |||||||||| ||| |||||||||||||||||||||| ||||    
T  16846645 gtctccgtgcccaaatcaagagaaataatcacaaattgctcaacagta 16846692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 313
Target Start/End: Complemental strand, 18326110 - 18326068
Alignment:
Q  271 gtctcggtgcccaaattaagtgaaataatcacaaattgctcaa 313  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||    
T  18326110 gtctccgtgcccaaatcaagtgaaataatcgcaaattgctcaa 18326068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 19374824 - 19374778
Alignment:
Q  92 aactaattttaaggaattgagtccaagactcttcaactcgaaattcc 138  Q
    ||||||||||||| |||||||||||||||  |||||||| |||||||    
T  19374824 aactaattttaagaaattgagtccaagaccgttcaactccaaattcc 19374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 20410746 - 20410673
Alignment:
Q  81 aagattatgataactaattttaaggaattgagtccaag-actcttcaactcgaaattccttcatctgccatataa 154  Q
    |||||||||||||||||||||||| |||| |||||||| |||| ||||||| ||| || |||| |||||| ||||    
T  20410746 aagattatgataactaattttaagaaattaagtccaagtactc-tcaactccaaaatctttcacctgccaaataa 20410673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 29460043 - 29460097
Alignment:
Q  65 agttattatctatttgaagattatgataactaattttaaggaattgagtccaaga 119  Q
    |||||| ||| ||||||||||| |||||||| |||||||||| |||| |||||||    
T  29460043 agttataatccatttgaagattttgataacttattttaaggatttgaatccaaga 29460097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 46769451 - 46769401
Alignment:
Q  80 gaagattatgataactaattttaaggaattgagtccaagactcttcaactc 130  Q
    ||||||| || |||||||||||||| | ||||||||||| |||||||||||    
T  46769451 gaagattttggtaactaattttaagaagttgagtccaaggctcttcaactc 46769401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 20414943 - 20414882
Alignment:
Q  99 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||||||||||||||  ||| ||| ||||| | |||||| |||||||| |||||    
T  20414943 tttaaggaattgagtccaagacttgtcatctccaaatttcatcatcttccatataataaaat 20414882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 26230299 - 26230218
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 159  Q
    ||||| ||| || |||||||| ||||  ||||||| ||||||||||| ||||| | | || ||||||||||||| |||||||    
T  26230299 ttgaacattctggtaactaatcttaaataattgagaccaagactcttgaactccatactctttcatctgccataaaacaaaa 26230218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 20495868 - 20495796
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 151  Q
    |||||||| || ||||||||  |||| | || |||||||||||||||||||| |||||| | ||||| |||||    
T  20495868 tgaagattctggtaactaatcctaagcagttcagtccaagactcttcaactccaaattcttccatcttccata 20495796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 21210467 - 21210551
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||| ||| ||||| |||| |||||||||| ||||||||||||  ||| ||| ||| |   |||||| ||||||||||||||    
T  21210467 atttgaatattgtgatagctaaatttaaggaatagagtccaagacttgtcatctccaaactttgtcatcttccatataacaaaat 21210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 71 - 310
Target Start/End: Original strand, 11970963 - 11971202
Alignment:
Q  71 tatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgttt 170  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| | |||||     
T  11970963 tatctatttgaagattatgataactaattctaagaaattgagtccaagactcttccactccaaattccttcatttgccatataacaaaatgagtttgttc 11971062  T
Q  171 gaaatcgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgc 270  Q
     ||||| ||| |||||||||||||||||| |||||| ||||||||||| |||| ||||||||  |  |  || ||| |||||||  | |||| || ||      
T  11971063 aaaatcatgagaaaaacaaagacaatcctctaacacgcttagatttggcataagaaatggcacctgatcaaatccttgaggaggtcgcaactgagtatat 11971162  T
Q  271 gtctcggtgcccaaattaagtgaaataatcacaaattgct 310  Q
     |||| ||||| |||| |||||||||||||||||||||||    
T  11971163 ttctcagtgccaaaatcaagtgaaataatcacaaattgct 11971202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 232
Target Start/End: Original strand, 11981669 - 11981825
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaat 175  Q
    |||||||||||| |||||||||||||||| ||| ||||||| |||||||| |||| |||||||||||| ||||||||||||||||| | |||||  ||||    
T  11981669 atttgaagattaagataactaattttaagaaatcgagtccaggactcttccactccaaattccttcatttgccatataacaaaatgagtttgttgaaaat 11981768  T
Q  176 cgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggca 232  Q
    | ||| |||||||||||||||||| ||||||||||| |||||| | || ||||||||    
T  11981769 catgagaaaaacaaagacaatcctgtaacacacttacatttggcacaagaaatggca 11981825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 53774919 - 53774802
Alignment:
Q  81 aagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtga 180  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | || ||| ||||| | |    
T  53774919 aagattctgataactaattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccatataacaaaatgagtttctttaaaatcataa 53774820  T
Q  181 caaaaacaaagacaatcc 198  Q
     ||||||||| |||||||    
T  53774819 gaaaaacaaatacaatcc 53774802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 3565825 - 3565744
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  3565825 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 3565744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 3557807 - 3557726
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||||| |||||    
T  3557807 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatatgccatataataaaat 3557726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 3560921 - 3561028
Alignment:
Q  53 tcaagtaattaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 152  Q
    |||| ||| |||||| || ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| | |||||  ||||||||||| ||    
T  3560921 tcaaataactaaagtcataatctaattgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattttttcatctgccaaat 3561020  T
Q  153 aacaaaat 160  Q
    || |||||    
T  3561021 aataaaat 3561028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 35767098 - 35767017
Alignment:
Q  80 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||| |||||  |||||||||||| |||| |||||||||||||||||| |||||| | ||||| |||||||||||||||    
T  35767098 gaagattttgatagttaattttaaggagttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaatg 35767017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 1686273 - 1686349
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    |||||||| || |||||||  |||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  1686273 ttgaagatcataataactatatttaagaaattgagtccaagactcgtcaacgccaaattccttcatctgccatataa 1686349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 53790651 - 53790552
Alignment:
Q  62 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||| |||||||||| ||||||||| ||| ||||||||||||| |||||||||||||| | ||||| || |||||   |||||| |||||||| ||||||    
T  53790651 taaaattattatctacttgaagattctgaaaactaattttaagaaattgagtccaagattgttcaaatccaaattttgtcatcttccatataataaaatg 53790552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 53430082 - 53430169
Alignment:
Q  73 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||| ||||||||  || ||||||||||||||||||||||||||||| |||||  | | | ||| ||||||||||||||| |||||||    
T  53430082 tctacttgaagatgttggtaactaattttaaggaattgagtccaagaatcttcggccccatatttcttcatctgccatatgacaaaat 53430169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 8443452 - 8443558
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaac 187  Q
    ||||||||||||||||  |||||| |||||||||| | ||||| ||| |||||||||||||| |||||| |||| | |   |||||||| | | ||||||    
T  8443452 tgataactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatctgccaaataacataatgagttctcttgaaatcataagaaaaac 8443551  T
Q  188 aaagaca 194  Q
    |||||||    
T  8443552 aaagaca 8443558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 837852 - 837775
Alignment:
Q  84 attatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||| ||||||||||  |||||| |||||||||||| ||| | ||| | |||||| |||||||||||||||||    
T  837852 attatgatagctaattttaaataattgaatccaagactcttgaacaccaaaattcttcatttgccatataacaaaatg 837775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 19361523 - 19361442
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||| ||||| |||||||||| || |||||||||| |||||||||||  |||||  | ||||| ||||||||||||||    
T  19361523 tgaagattttgatacctaattttaatgagttgagtccaaaactcttcaacttcaaattattccatcttccatataacaaaat 19361442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 19359218 - 19359160
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattc 137  Q
    |||||||| ||||| ||||||||||  | ||||||||||||||||||||||| ||||||    
T  19359218 tgaagattttgatacctaattttaataagttgagtccaagactcttcaactccaaattc 19359160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 10464323 - 10464231
Alignment:
Q  106 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcc 198  Q
    |||||| |||||||||| | | | | ||| |||||||| ||||||||||||||||| |  | || |||||| | |||||||||||||||||||    
T  10464323 aattgaatccaagactcctgatccccaaaatccttcatttgccatataacaaaatgggtattttggaaatcataacaaaaacaaagacaatcc 10464231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 6113151 - 6113096
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcat 143  Q
    ||||||||||||  |||||| |||||||||||||||| ||||| ||||||| ||||    
T  6113151 tgataactaattcgaaggaactgagtccaagactctttaactccaaattccatcat 6113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 10475231 - 10475169
Alignment:
Q  136 tccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcc 198  Q
    |||||||| ||||||||||||||||| |  | || |||||| | |||||||||||||||||||    
T  10475231 tccttcatttgccatataacaaaatgggtattttggaaatcataacaaaaacaaagacaatcc 10475169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 6392893 - 6392832
Alignment:
Q  91 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 152  Q
    |||||||||||||  |||||| |||||||||| | ||||| ||| |||||||| ||||||||    
T  6392893 taactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatttgccatat 6392832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 10482253 - 10482181
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||| |||||||||  |||||| ||||||||   | ||||| ||| |||||||| ||||||||||||||||    
T  10482253 tgataagtaattttaaataattgaatccaagacgactgaactccaaaatccttcatttgccatataacaaaat 10482181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 2e-47; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 52 - 316
Target Start/End: Complemental strand, 15961336 - 15961072
Alignment:
Q  52 ttcaagtaattaaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccata 151  Q
    ||||||| |||||||| || || |||||||||||||| |||| ||| ||||| ||||||||||||||| |||||| ||| ||||| |||||| | |||||    
T  15961336 ttcaagtcattaaagtgatcatatatttgaagattataataattaactttaaagaattgagtccaagattcttcagctccaaatttcttcattttccata 15961237  T
Q  152 taacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgagg 251  Q
    |||| | ||||| ||||||||| || ||| |||||||||||||||  ||||||||||||||||||||| ||||| |||| | ||| | |||||||  |||    
T  15961236 taaccatatgtgtttgtttgaagtcatgagaaaaacaaagacaattatttaacacacttagatttggtttaacatatggaacttcattgaaacctttagg 15961137  T
Q  252 agggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaattgctcaatag 316  Q
    |||    |||| || ||| ||||| |||||||||| |||||||| ||||||||| || |||||||    
T  15961136 aggtgccaactgagtatgtgtctcagtgcccaaatcaagtgaaacaatcacaaaatgttcaatag 15961072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 21855355 - 21855453
Alignment:
Q  62 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||| || ||||||| |||||||||| ||||||| |||||||| |||||||||||| |||||||| | |||||||||||||| ||||||||||||||    
T  21855355 taaagtcataatctattagaagattatggtaactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaaat 21855453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 39379049 - 39379131
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  39379049 ttgaagatcatgataactgattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 39379131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 4014947 - 4015032
Alignment:
Q  72 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaa 157  Q
    ||||||| |||||| ||| ||||||| ||||||||||||||||||||| |||||||| | ||||| ||||||||||||||||||||    
T  4014947 atctattagaagatcatggtaactaactttaaggaattgagtccaagaatcttcaaccccaaatttcttcatctgccatataacaa 4015032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 4366467 - 4366565
Alignment:
Q  62 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||| | ||||||||||||||| || ||||||| |||||| ||| ||||||||||||||||||| |  |||| |||||||||||||| ||||||||    
T  4366467 taaagttgtaatctatttgaagattctggtaactaactttaagaaatggagtccaagactcttcaaccccgaatttcttcatctgccataaaacaaaat 4366565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 4570997 - 4570927
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||||||||||| |||||||||||||| |||||||| | ||||| |||||| ||||||||||||||||    
T  4570997 ataactaattttaagcaattgagtccaagaatcttcaaccccaaatttcttcatttgccatataacaaaat 4570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 10219071 - 10218985
Alignment:
Q  74 ctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||| ||||| |||| |||||||||||||| |||||||||||||| |||||||  | ||||| |||||| ||||||| ||||||||    
T  10219071 ctattcgaagagtatggtaactaattttaagtaattgagtccaagaatcttcaatcccaaatttcttcatttgccatacaacaaaat 10218985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 50645485 - 50645556
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||||||  |||||| |||||||||||| ||||| ||| |||||||| ||||| |||||||||||    
T  50645485 ataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatttgccacataacaaaatg 50645556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 160
Target Start/End: Original strand, 17560759 - 17560843
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||||||  | |||||||||| |||||||| | |||||||| |||||||| | ||||| |||||| ||||||||||| ||||    
T  17560759 atttgaagatcgttataactaattataaggaatggtgtccaagaatcttcaaccccaaatttcttcatgtgccatataaccaaat 17560843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 4016755 - 4016831
Alignment:
Q  73 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 149  Q
    |||||| |||||| ||| ||||||| |||||  || |||||||| || |||||||||| ||||| ||||||||||||    
T  4016755 tctattagaagatcatggtaactaaatttaaacaactgagtccaggaatcttcaactccaaatttcttcatctgcca 4016831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 20770739 - 20770602
Alignment:
Q  71 tatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgttt 170  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| || |||||||||||| ||||||||||||||||  | || |||    
T  20770739 tatctatttgaagattatgataactaattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccatataacaaaataagttttttt 20770640  T
Q  171 gaaatcgtgacaaaaacaaagacaatcctttaacacac 208  Q
     | ||| ||| ||||||||| ||||||| | |||||||    
T  20770639 aacatcatgagaaaaacaaatacaatccatcaacacac 20770602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 6921350 - 6921421
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||||||    
T  6921350 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccagataacaaaatg 6921421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 17369750 - 17369675
Alignment:
Q  74 ctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 149  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| |||||    
T  17369750 ctatttgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgcca 17369675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 6947880 - 6947997
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaa 189  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| | |||||| || | ||  |||||||| ||  ||||||||    
T  6947880 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccaaagaacaaagtgggttttcttgaaatcatgtgaaaaacaa 6947979  T
Q  190 agacaatcctttaacaca 207  Q
    || |||||| | ||||||    
T  6947980 aggcaatccatcaacaca 6947997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 6954521 - 6954590
Alignment:
Q  92 aactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||||  |||||||||||||| |||||||||| |||||||||||| ||||| |||||||||||    
T  6954521 aactaattttaatcaattgagtccaagattcttcaactccaaattccttcatttgccaaataacaaaatg 6954590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 14749463 - 14749359
Alignment:
Q  94 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagac 193  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||| |||||  ||||| ||||||||| |  | |||||||  |||| ||||||| ||||    
T  14749463 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatcctccataaaacaaaatgggtctctttgaaacggtgagaaaaacatagac 14749364  T
Q  194 aatcc 198  Q
    |||||    
T  14749363 aatcc 14749359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 6935218 - 6935289
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||||||||||||||| ||||||||| |||| ||||| |||||||||||| ||||| |||||| ||||    
T  6935218 ataactaattttaaggaatttagtccaagattcttgaactccaaattccttcatttgccaaataacataatg 6935289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 24950134 - 24950214
Alignment:
Q  80 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||||| ||||  |||||||||||||||| |||||||||| ||||||| ||| | | |||||| ||||||||||||||    
T  24950134 gaagattatcataatcaattttaaggaattgactccaagactcctcaactccaaacttcatcatcttccatataacaaaat 24950214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 6942971 - 6943037
Alignment:
Q  94 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||||||||||||| ||| |||| |||||||||| |||||||||||| ||| | ||||||||||    
T  6942971 ctaattttaaggaattgcgtctaagattcttcaactccaaattccttcatttgctaaataacaaaat 6943037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 24254428 - 24254497
Alignment:
Q  92 aactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||| ||||| | ||||||||||||||| | ||| |||| |||||||  |||||||||||||||||||||    
T  24254428 aactgattttgatgaattgagtccaagattgttcgactccaaattccgacatctgccatataacaaaatg 24254497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 5979078 - 5979029
Alignment:
Q  109 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 158  Q
    ||||||||||||||||  |||| ||| ||||||||| |||||||||||||    
T  5979078 tgagtccaagactcttggactccaaactccttcatcagccatataacaaa 5979029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 33576221 - 33576172
Alignment:
Q  109 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 158  Q
    |||||||||||||||| ||||| ||| |||||||||  ||||||||||||    
T  33576221 tgagtccaagactcttgaactccaaactccttcatcatccatataacaaa 33576172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 30399189 - 30399129
Alignment:
Q  94 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    ||||||||||||| ||||||||| | ||||||||||| ||||   ||||||| ||||||||    
T  30399189 ctaattttaaggagttgagtccacggctcttcaactctaaatgttttcatcttccatataa 30399129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 88 - 254
Target Start/End: Original strand, 4667 - 4833
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaac 187  Q
    |||||||||||||| |  || |||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| | || ||||||||| ||| ||||||    
T  4667 tgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaaaaac 4766  T
Q  188 aaagacaatcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagg 254  Q
    ||||| |||| ||||| ||||||||||| |||||||||| ||||| ||| | ||||||  |||||||    
T  4767 aaagataatcatttaagacacttagattaggtataacaattggcacttcattgaaaccatgaggagg 4833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 24330871 - 24330969
Alignment:
Q  62 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||| || ||||||| |||||||||| ||||||| |||||||| |||||||||||| |||||||| | |||||||||||||| ||||||||||||||    
T  24330871 taaagtcataatctattagaagattatggtaactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaaat 24330969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 18964813 - 18964894
Alignment:
Q  73 tctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  18964813 tctatttgaagattctgataacaaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataa 18964894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 29597531 - 29597653
Alignment:
Q  69 attatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgt 168  Q
    ||||||||  || ||||| ||| |||||||||||||||||||||||||||| | |||||||| ||||||  |||| ||||||||||||||||| | ||      
T  29597531 attatctacctgtagattttgaaaactaattttaaggaattgagtccaagattgttcaactccaaattcaatcatttgccatataacaaaatgagtttcc 29597630  T
Q  169 ttgaaatcgtgacaaaaacaaag 191  Q
    ||||||| |||| ||||||||||    
T  29597631 ttgaaatggtgagaaaaacaaag 29597653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 198
Target Start/End: Complemental strand, 29647754 - 29647638
Alignment:
Q  82 agattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgac 181  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||| || ||||||  |||| ||||||||||||||||| | ||  || | || ||||     
T  29647754 agattttgaaaactaattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatataacaaaatgagttttcttaagatggtgag 29647655  T
Q  182 aaaaacaaagacaatcc 198  Q
    |||||||||| ||||||    
T  29647654 aaaaacaaaggcaatcc 29647638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 29642450 - 29642358
Alignment:
Q  69 attatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||| | | ||||| ||| |||||||||||||||||||||||||||| | ||||| || ||||||  |||| ||||||||||| |||||    
T  29642450 attatctactagtagattctgaaaactaattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatataacgaaatg 29642358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 23086833 - 23086784
Alignment:
Q  109 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 158  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  23086833 tgagtccaagactcttgaactccaaactccttcatctgccatataacaaa 23086784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 28763891 - 28763976
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||||||||  ||||| || ||||| |||||| || ||||||||| |||||||| ||||| | |||||| |||||||||||||||    
T  28763891 atttgaagatcctgatagctgattttgaggaatcgactccaagacttttcaactccaaattgcgtcatcttccatataacaaaatg 28763976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 209
Target Start/End: Original strand, 18908798 - 18908928
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgt 178  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||| | || | | |||  ||    
T  18908798 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgggtttctctaaaacggt 18908897  T
Q  179 gacaaaaacaaagacaatcctttaacacact 209  Q
    || ||||||| ||||||||| | ||||||||    
T  18908898 gagaaaaacatagacaatccatcaacacact 18908928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 18913546 - 18913628
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  18913546 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 18913628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 18920754 - 18920836
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  18920754 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 18920836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 14514988 - 14514903
Alignment:
Q  72 atctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaa 157  Q
    |||||||||||||||   |||||||||||||||||||||||||||||| |||||||||| |||||| | ||| | |||||||||||    
T  14514988 atctatttgaagattcatataactaattttaaggaattgagtccaagaatcttcaactccaaattcatccattttccatataacaa 14514903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 554546 - 554428
Alignment:
Q  90 ataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaa 189  Q
    ||||||||||||||| ||||||||||||||||||| ||||| | ||||  |||| |||||||||| || ||| | |   |  ||||||||| ||||||||    
T  554546 ataactaattttaagtaattgagtccaagactctttaactccatattctatcatttgccatataataagatgggttccctcaaaatcgtgagaaaaacaa 554447  T
Q  190 agacaatcctttaacacac 208  Q
    ||||||| |||||||||||    
T  554446 agacaattctttaacacac 554428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 25377145 - 25377040
Alignment:
Q  89 gataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaaca 188  Q
    |||||||||||||||  |||||| |||||||||||| ||||| ||| |||||||||  |||||||||||||||   ||  |  ||||| |||||||||||    
T  25377145 gataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatcatccatataacaaaatggttttcctccaaatcatgacaaaaaca 25377046  T
Q  189 aagaca 194  Q
    ||||||    
T  25377045 aagaca 25377040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 20699461 - 20699510
Alignment:
Q  111 agtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  20699461 agtccaagacgcttcaactcgaaattctctcatctgccatataacaaaat 20699510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 20975630 - 20975557
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    ||||| |||| |||||  |||||| ||||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  20975630 tgatacctaaatttaaacaattgaatccaagaatcttcaactccaaattccctcatttgccatataacaaaatg 20975557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 2576963 - 2576887
Alignment:
Q  79 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataac 155  Q
    |||||||| || |||||||||||||||| ||||||||| | ||||||||||| ||    ||||||||||||||||||    
T  2576963 tgaagattttggtaactaattttaaggagttgagtccatggctcttcaactccaatgatcttcatctgccatataac 2576887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 2596087 - 2596013
Alignment:
Q  80 gaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    ||||||| || |||||||||||||||| ||||||||| | ||||||||||| ||    |||||||||||||||||    
T  2596087 gaagattttggtaactaattttaaggagttgagtccatggctcttcaactccaataatcttcatctgccatataa 2596013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 20980665 - 20980604
Alignment:
Q  99 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    ||||||||| | |||||||||||||||||||| ||||||  |||| | ||||||||||||||    
T  20980665 tttaaggaacttagtccaagactcttcaactctaaattctgtcattttccatataacaaaat 20980604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 21021279 - 21021332
Alignment:
Q  100 ttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatata 153  Q
    ||||| |||| |||||| |||| |||||||| ||||||||||||||||||||||    
T  21021279 ttaagcaatttagtccatgacttttcaactctaaattccttcatctgccatata 21021332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 2581387 - 2581323
Alignment:
Q  91 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataac 155  Q
    |||||||||||||||| ||||||||| ||||| ||||||| ||    ||||||||||||||||||    
T  2581387 taactaattttaaggagttgagtccatgactcgtcaactccaatgatcttcatctgccatataac 2581323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 1826395 - 1826329
Alignment:
Q  140 tcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacaca 207  Q
    |||||||||||||||||||||| | || ||||||||| ||| ||||||||||||| ||| | ||||||    
T  1826395 tcatctgccatataacaaaatg-ggttatttgaaatcatgagaaaaacaaagacagtccatcaacaca 1826329  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 20712556 - 20712603
Alignment:
Q  113 tccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||||||||  ||||||| |||||| ||||||||||||||    
T  20712556 tccaagactcttcaactgcaaattccctcatcttccatataacaaaat 20712603  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 20967766 - 20967700
Alignment:
Q  94 ctaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||| ||| ||||| | |||||||||||||||| ||| ||||| | |||| ||||||||||||||||    
T  20967766 ctaaatttgaggaacttagtccaagactcttcagctctaaatttcgtcatttgccatataacaaaat 20967700  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 25698561 - 25698507
Alignment:
Q  106 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||| ||||||||| |||||||||| ||||||  |||| ||||||||||||||||    
T  25698561 aatttagtccaagagtcttcaactccaaattctctcatttgccatataacaaaat 25698507  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 537859 - 537899
Alignment:
Q  89 gataactaattttaaggaattgagtccaagactcttcaact 129  Q
    ||||||||||||||||| ||| ||| |||||||||||||||    
T  537859 gataactaattttaagggattcagttcaagactcttcaact 537899  T

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Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 3625832 - 3625740
Alignment:
Q  62 taaagttattatctatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    |||||| || ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||||||||||    
T  3625832 taaagtcataatctaattgaagattttgataactaattttaagaaattgagtccaagactcttcaaccccaaatttcttcatttgccatataa 3625740  T

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Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 25901277 - 25901350
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||||||||| |  |||||| |||||||||||| ||||||||| |||||||| | |||||||||||||||    
T  25901277 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 25901350  T

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Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 25915295 - 25915368
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 161  Q
    |||||||||||||| |  |||||| |||||||||||| ||||||||| |||||||| | |||||||||||||||    
T  25915295 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 25915368  T

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Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 194
Target Start/End: Complemental strand, 27618573 - 27618457
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcg 177  Q
    ||||||||| |||||||||| |||||| || ||||||||||||||||||||||  | ||| | ||| | ||||||||||||||| | ||| || |||||     
T  27618573 ttgaagattctgataactaactttaagcaactgagtccaagactcttcaactccgagttcttccattttccatataacaaaatgagtttgcttaaaatca 27618474  T
Q  178 tgacaaaaacaaagaca 194  Q
    |||||||||||||||||    
T  27618473 tgacaaaaacaaagaca 27618457  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 29390358 - 29390288
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 158  Q
    |||||||||| || ||  |||| ||| ||||| |||||||||| ||||||| |||||||||||||||||||    
T  29390358 tgataactaaattgaaacaatttagttcaagattcttcaactccaaattccctcatctgccatataacaaa 29390288  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 29157117 - 29157054
Alignment:
Q  91 taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 154  Q
    |||||||||||||||| ||||||||| | ||||||||||| ||||   | ||||||||||||||    
T  29157117 taactaattttaaggagttgagtccatggctcttcaactccaaatgtttccatctgccatataa 29157054  T

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Target: scaffold0649 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 5510 - 5438
Alignment:
Q  88 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||| |||||||||   |||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  5510 tgataactaaatttaaggaacatagtccaagactcttcaactctaaattttttcatctgccatataacaaaat 5438  T

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Target: scaffold0354 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 7545 - 7471
Alignment:
Q  78 ttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 152  Q
    |||||||||  |||| ||||||||||||||||||  ||||||||| ||||||| |||||||||||| ||||||||    
T  7545 ttgaagattccgatagctaattttaaggaattgaacccaagactcatcaactccaaattccttcatttgccatat 7471  T

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Target: scaffold0242 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 13715 - 13800
Alignment:
Q  75 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||| ||||| || |||||||| || ||||||||||| || |||  ||  |||||||||||||||||||||| |||||    
T  13715 tatttgaagattttgataccttattttaagaaactgagtccaagattcatcatttcctaattccttcatctgccatataagaaaat 13800  T

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Target: scaffold0242; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 22550 - 22635
Alignment:
Q  75 tatttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||| ||||| || |||||||| || ||||||||||| || |||  ||  |||||||||||||||||||||| |||||    
T  22550 tatttgaagattttgataccttattttaagaaactgagtccaagattcatcatttcctaattccttcatctgccatataagaaaat 22635  T

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Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 24289 - 24206
Alignment:
Q  76 atttgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 159  Q
    ||||||||||  ||||| |||| ||||||||||||||| ||||||| |||| ||| | ||||  |||||| |||||||||||||    
T  24289 atttgaagatcgtgatagctaaatttaaggaattgagttcaagacttttcatctccatattctgtcatcttccatataacaaaa 24206  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 16395 - 16442
Alignment:
Q  113 tccaagactcttcaactcgaaattccttcatctgccatataacaaaat 160  Q
    |||||||||||||||||  ||||||| |||||| ||||||||||||||    
T  16395 tccaagactcttcaactgcaaattccctcatcttccatataacaaaat 16442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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