View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13734_high_42 (Length: 268)

Name: NF13734_high_42
Description: NF13734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13734_high_42
NF13734_high_42
[»] chr1 (65 HSPs)
chr1 (85-259)||(23332445-23332616)
chr1 (1-83)||(48325325-48325407)
chr1 (1-81)||(16987550-16987630)
chr1 (1-82)||(21255672-21255753)
chr1 (1-82)||(29253953-29254034)
chr1 (5-82)||(40605308-40605385)
chr1 (1-81)||(25988874-25988954)
chr1 (1-81)||(43640875-43640955)
chr1 (1-81)||(47059778-47059858)
chr1 (1-92)||(23554854-23554945)
chr1 (1-81)||(4604632-4604711)
chr1 (1-84)||(25702097-25702181)
chr1 (1-84)||(36930642-36930724)
chr1 (1-83)||(48872482-48872563)
chr1 (1-82)||(44730747-44730827)
chr1 (1-78)||(25098683-25098756)
chr1 (1-84)||(27352733-27352815)
chr1 (1-80)||(51339590-51339668)
chr1 (1-83)||(50527944-50528025)
chr1 (1-82)||(25061836-25061916)
chr1 (4-81)||(35043608-35043685)
chr1 (4-84)||(17526526-17526606)
chr1 (1-81)||(32966370-32966450)
chr1 (4-82)||(32216517-32216593)
chr1 (1-84)||(49621464-49621546)
chr1 (1-83)||(13813661-13813743)
chr1 (1-51)||(25995563-25995613)
chr1 (1-78)||(32821738-32821814)
chr1 (1-73)||(30530471-30530542)
chr1 (4-84)||(38019389-38019467)
chr1 (1-75)||(8934429-8934502)
chr1 (4-90)||(14002621-14002707)
chr1 (1-51)||(26501398-26501448)
chr1 (1-83)||(30687155-30687236)
chr1 (1-42)||(6841894-6841935)
chr1 (4-84)||(22389412-22389490)
chr1 (1-82)||(40595942-40596022)
chr1 (1-81)||(34941808-34941888)
chr1 (4-80)||(36230197-36230273)
chr1 (1-77)||(37947112-37947188)
chr1 (1-81)||(43611971-43612050)
chr1 (1-77)||(51168660-51168736)
chr1 (4-83)||(11460900-11460978)
chr1 (1-84)||(19920865-19920948)
chr1 (1-83)||(587002-587084)
chr1 (221-259)||(5609488-5609526)
chr1 (1-51)||(25130806-25130856)
chr1 (4-82)||(40238544-40238622)
chr1 (1-81)||(6313706-6313787)
chr1 (1-83)||(16658542-16658627)
chr1 (1-30)||(39010917-39010946)
chr1 (4-41)||(42299116-42299153)
chr1 (221-258)||(52109602-52109639)
chr1 (1-41)||(366760-366800)
chr1 (4-84)||(6829670-6829750)
chr1 (1-41)||(7203772-7203812)
chr1 (1-29)||(7645492-7645520)
chr1 (223-259)||(24538638-24538674)
chr1 (1-41)||(25302573-25302613)
chr1 (1-29)||(27327843-27327871)
chr1 (1-41)||(31480063-31480103)
chr1 (4-84)||(35846764-35846844)
chr1 (1-41)||(41885824-41885864)
chr1 (1-41)||(42843272-42843312)
chr1 (26-78)||(52368767-52368819)
[»] chr2 (57 HSPs)
chr2 (2-83)||(8352939-8353020)
chr2 (1-82)||(36763407-36763488)
chr2 (4-83)||(34913194-34913273)
chr2 (1-82)||(23358467-23358547)
chr2 (4-82)||(1574559-1574637)
chr2 (1-81)||(37631255-37631335)
chr2 (1-84)||(8555177-8555260)
chr2 (4-78)||(1052381-1052455)
chr2 (1-78)||(30856910-30856986)
chr2 (4-84)||(28165235-28165315)
chr2 (1-84)||(5167628-5167710)
chr2 (1-81)||(694372-694452)
chr2 (1-80)||(3959999-3960078)
chr2 (1-84)||(19668073-19668155)
chr2 (1-84)||(40951293-40951375)
chr2 (1-84)||(43791676-43791759)
chr2 (5-83)||(21805673-21805750)
chr2 (1-83)||(44059609-44059691)
chr2 (21-81)||(10983531-10983591)
chr2 (221-259)||(12130638-12130676)
chr2 (1-83)||(27307131-27307213)
chr2 (1-83)||(36582359-36582441)
chr2 (12-78)||(41493188-41493254)
chr2 (1-82)||(15283137-15283217)
chr2 (1-78)||(37966459-37966536)
chr2 (1-41)||(4842447-4842487)
chr2 (1-41)||(10288255-10288295)
chr2 (1-81)||(23047971-23048051)
chr2 (1-53)||(36383565-36383617)
chr2 (1-52)||(6365289-6365340)
chr2 (221-259)||(1417981-1418019)
chr2 (1-43)||(6851585-6851627)
chr2 (1-83)||(11828706-11828788)
chr2 (1-75)||(32755781-32755855)
chr2 (1-39)||(35792386-35792424)
chr2 (5-75)||(42251815-42251884)
chr2 (1-75)||(42665707-42665780)
chr2 (1-30)||(1889250-1889279)
chr2 (1-30)||(3091844-3091873)
chr2 (1-82)||(4432430-4432510)
chr2 (1-82)||(10550346-10550427)
chr2 (1-30)||(13104582-13104611)
chr2 (1-30)||(14140278-14140307)
chr2 (1-30)||(25801750-25801779)
chr2 (1-30)||(29795539-29795568)
chr2 (1-30)||(32750101-32750130)
chr2 (1-30)||(34249683-34249712)
chr2 (1-30)||(36376790-36376819)
chr2 (1-30)||(39454186-39454215)
chr2 (1-34)||(45515534-45515567)
chr2 (1-73)||(4263760-4263832)
chr2 (4-72)||(13553249-13553316)
chr2 (52-84)||(19637380-19637412)
chr2 (52-84)||(19835973-19836005)
chr2 (1-41)||(19913887-19913927)
chr2 (221-261)||(22845685-22845725)
chr2 (1-81)||(44484544-44484624)
[»] chr5 (61 HSPs)
chr5 (1-81)||(11880875-11880955)
chr5 (1-82)||(41460219-41460300)
chr5 (1-81)||(3960057-3960137)
chr5 (1-81)||(9636047-9636126)
chr5 (5-84)||(24792559-24792637)
chr5 (1-77)||(23991334-23991410)
chr5 (1-81)||(29803326-29803406)
chr5 (1-84)||(91318-91400)
chr5 (1-84)||(11464008-11464091)
chr5 (1-84)||(26626705-26626787)
chr5 (1-82)||(5996768-5996850)
chr5 (1-83)||(17063968-17064050)
chr5 (1-71)||(41210412-41210482)
chr5 (1-82)||(5698216-5698296)
chr5 (1-81)||(582758-582837)
chr5 (1-81)||(26627433-26627512)
chr5 (1-82)||(36581355-36581435)
chr5 (1-81)||(7144678-7144757)
chr5 (1-77)||(39595377-39595452)
chr5 (1-82)||(15639488-15639568)
chr5 (1-77)||(34428265-34428342)
chr5 (1-81)||(4954569-4954649)
chr5 (1-77)||(12612909-12612985)
chr5 (1-41)||(13734288-13734328)
chr5 (1-81)||(15622147-15622227)
chr5 (1-41)||(28811531-28811571)
chr5 (1-40)||(3770953-3770992)
chr5 (1-40)||(8959263-8959302)
chr5 (1-84)||(9594581-9594664)
chr5 (1-84)||(12512896-12512979)
chr5 (1-75)||(125195-125268)
chr5 (1-51)||(12401295-12401345)
chr5 (221-259)||(15988749-15988787)
chr5 (1-39)||(20040889-20040927)
chr5 (52-94)||(20040927-20040969)
chr5 (1-51)||(20125493-20125543)
chr5 (221-259)||(25730957-25730995)
chr5 (1-51)||(28501720-28501770)
chr5 (52-90)||(32731996-32732034)
chr5 (1-51)||(33823612-33823662)
chr5 (221-259)||(34652254-34652292)
chr5 (4-81)||(3263396-3263473)
chr5 (4-81)||(7077227-7077304)
chr5 (1-30)||(11666282-11666311)
chr5 (222-259)||(12660466-12660503)
chr5 (1-30)||(19376071-19376100)
chr5 (36-77)||(19824126-19824167)
chr5 (1-83)||(28904095-28904180)
chr5 (1-83)||(28940490-28940575)
chr5 (1-30)||(33567178-33567207)
chr5 (1-30)||(34381115-34381144)
chr5 (223-264)||(41940732-41940773)
chr5 (1-65)||(3722981-3723044)
chr5 (1-29)||(6865727-6865755)
chr5 (1-41)||(19437360-19437400)
chr5 (1-41)||(22203810-22203850)
chr5 (1-41)||(22920420-22920460)
chr5 (1-81)||(25345441-25345521)
chr5 (1-29)||(36624421-36624449)
chr5 (1-41)||(39458744-39458784)
chr5 (1-29)||(40566157-40566185)
[»] chr6 (23 HSPs)
chr6 (1-87)||(16743148-16743234)
chr6 (4-77)||(34490453-34490526)
chr6 (1-81)||(11742872-11742952)
chr6 (1-82)||(20712169-20712250)
chr6 (1-86)||(23653776-23653861)
chr6 (1-81)||(12044433-12044513)
chr6 (1-77)||(32644715-32644791)
chr6 (1-84)||(32729992-32730074)
chr6 (4-81)||(9188834-9188911)
chr6 (4-77)||(27334970-27335043)
chr6 (4-77)||(27395710-27395783)
chr6 (1-81)||(8173201-8173280)
chr6 (1-80)||(3339388-3339467)
chr6 (1-84)||(21443791-21443873)
chr6 (1-51)||(3660271-3660321)
chr6 (221-259)||(28107288-28107326)
chr6 (1-41)||(1897789-1897829)
chr6 (1-82)||(11017485-11017566)
chr6 (1-30)||(29383660-29383689)
chr6 (1-41)||(1803972-1804012)
chr6 (1-41)||(2582765-2582805)
chr6 (1-81)||(15328592-15328672)
chr6 (1-41)||(16533188-16533228)
[»] chr4 (55 HSPs)
chr4 (1-77)||(34027999-34028075)
chr4 (1-85)||(18874808-18874892)
chr4 (1-84)||(42510810-42510893)
chr4 (1-84)||(46567032-46567114)
chr4 (1-84)||(23220438-23220522)
chr4 (1-81)||(28676043-28676122)
chr4 (1-80)||(33860435-33860514)
chr4 (1-83)||(42854044-42854126)
chr4 (1-83)||(44272698-44272780)
chr4 (3-81)||(44495884-44495962)
chr4 (1-81)||(33438148-33438227)
chr4 (1-83)||(3475971-3476053)
chr4 (1-77)||(2613509-2613585)
chr4 (1-84)||(12638927-12639009)
chr4 (3-82)||(34259931-34260010)
chr4 (12-82)||(48148482-48148552)
chr4 (1-83)||(55510962-55511043)
chr4 (1-41)||(8456006-8456046)
chr4 (1-81)||(9032883-9032963)
chr4 (1-77)||(41609564-41609640)
chr4 (1-84)||(3223092-3223175)
chr4 (1-84)||(5208212-5208295)
chr4 (221-259)||(29655666-29655704)
chr4 (1-83)||(44368088-44368170)
chr4 (1-83)||(51377179-51377261)
chr4 (4-41)||(16508905-16508942)
chr4 (1-41)||(4896428-4896468)
chr4 (1-81)||(23836989-23837068)
chr4 (1-77)||(24088432-24088508)
chr4 (1-81)||(27001297-27001377)
chr4 (1-81)||(43983000-43983080)
chr4 (1-81)||(47106014-47106094)
chr4 (1-52)||(15515887-15515938)
chr4 (1-40)||(29577365-29577404)
chr4 (22-81)||(38889000-38889059)
chr4 (1-75)||(5234366-5234439)
chr4 (221-259)||(18442147-18442185)
chr4 (1-43)||(20956508-20956550)
chr4 (7-81)||(23094485-23094557)
chr4 (1-39)||(24209717-24209755)
chr4 (1-75)||(31275249-31275322)
chr4 (221-259)||(37245852-37245890)
chr4 (221-259)||(51259529-51259567)
chr4 (221-259)||(55735158-55735196)
chr4 (1-82)||(8026651-8026732)
chr4 (1-30)||(9162169-9162198)
chr4 (1-42)||(39449273-39449314)
chr4 (1-30)||(46912001-46912030)
chr4 (1-82)||(51389419-51389499)
chr4 (1-73)||(52636345-52636418)
chr4 (13-81)||(14593195-14593263)
chr4 (1-65)||(22071601-22071664)
chr4 (1-41)||(25241805-25241845)
chr4 (1-29)||(32621730-32621758)
chr4 (1-41)||(32901432-32901472)
[»] chr7 (59 HSPs)
chr7 (1-84)||(40693413-40693496)
chr7 (1-82)||(4678166-4678247)
chr7 (1-80)||(21588816-21588895)
chr7 (1-83)||(37392146-37392228)
chr7 (1-81)||(46148269-46148349)
chr7 (1-86)||(28110058-28110143)
chr7 (1-78)||(40077358-40077435)
chr7 (1-81)||(18157074-18157153)
chr7 (1-84)||(25940553-25940635)
chr7 (4-78)||(42467311-42467385)
chr7 (4-84)||(2469798-2469877)
chr7 (1-84)||(43079515-43079600)
chr7 (4-82)||(9031313-9031390)
chr7 (1-79)||(43107715-43107792)
chr7 (1-82)||(6655505-6655585)
chr7 (1-90)||(10591027-10591116)
chr7 (22-79)||(10619589-10619646)
chr7 (1-41)||(27688740-27688780)
chr7 (1-41)||(29034188-29034228)
chr7 (1-81)||(33056719-33056799)
chr7 (4-83)||(4971394-4971472)
chr7 (1-75)||(12141987-12142060)
chr7 (1-83)||(44187794-44187876)
chr7 (4-53)||(34304596-34304645)
chr7 (4-93)||(35072122-35072210)
chr7 (1-41)||(12232931-12232971)
chr7 (1-85)||(25332384-25332467)
chr7 (1-81)||(26041413-26041493)
chr7 (1-81)||(30941280-30941359)
chr7 (1-81)||(33050286-33050366)
chr7 (1-81)||(44564612-44564691)
chr7 (4-73)||(47905011-47905081)
chr7 (4-51)||(30201365-30201412)
chr7 (1-84)||(35098473-35098555)
chr7 (1-83)||(8061633-8061713)
chr7 (4-82)||(20406647-20406725)
chr7 (221-259)||(29200955-29200993)
chr7 (221-259)||(30824494-30824532)
chr7 (1-83)||(31329240-31329322)
chr7 (4-82)||(38547177-38547255)
chr7 (1-51)||(42431826-42431876)
chr7 (221-258)||(16098639-16098676)
chr7 (1-30)||(21752761-21752790)
chr7 (1-30)||(37856120-37856149)
chr7 (1-42)||(38990204-38990245)
chr7 (1-30)||(39875748-39875777)
chr7 (1-30)||(41077443-41077472)
chr7 (1-30)||(42204665-42204694)
chr7 (1-66)||(43444731-43444795)
chr7 (33-78)||(45154432-45154477)
chr7 (1-81)||(116734-116814)
chr7 (1-29)||(5978682-5978710)
chr7 (1-81)||(30864305-30864385)
chr7 (1-77)||(32315929-32316005)
chr7 (56-84)||(34978455-34978483)
chr7 (1-41)||(42118625-42118665)
chr7 (1-29)||(46651775-46651803)
chr7 (1-41)||(48866858-48866898)
chr7 (1-77)||(49014291-49014367)
[»] chr8 (47 HSPs)
chr8 (1-83)||(14548711-14548793)
chr8 (1-81)||(29108088-29108168)
chr8 (1-83)||(38174135-38174217)
chr8 (1-82)||(9000901-9000982)
chr8 (1-83)||(6849147-6849229)
chr8 (1-82)||(6005047-6005127)
chr8 (1-81)||(1796586-1796665)
chr8 (1-81)||(30578357-30578437)
chr8 (4-77)||(9895112-9895185)
chr8 (5-81)||(36524640-36524716)
chr8 (1-84)||(12045539-12045621)
chr8 (1-84)||(42443209-42443291)
chr8 (1-78)||(5782891-5782967)
chr8 (1-81)||(30927819-30927899)
chr8 (1-41)||(32725710-32725750)
chr8 (1-81)||(36740415-36740494)
chr8 (1-81)||(38844679-38844759)
chr8 (19-77)||(20284828-20284886)
chr8 (19-77)||(21071457-21071515)
chr8 (1-83)||(43605555-43605637)
chr8 (4-81)||(37392016-37392093)
chr8 (1-94)||(41273618-41273710)
chr8 (1-77)||(3206355-3206431)
chr8 (1-77)||(20994950-20995026)
chr8 (1-41)||(37524356-37524396)
chr8 (1-80)||(9046256-9046334)
chr8 (4-59)||(10344434-10344489)
chr8 (1-84)||(23258135-23258217)
chr8 (1-40)||(34247877-34247916)
chr8 (221-259)||(185591-185629)
chr8 (1-51)||(24503020-24503070)
chr8 (4-34)||(31665925-31665955)
chr8 (1-51)||(37562059-37562109)
chr8 (1-75)||(40413258-40413331)
chr8 (1-30)||(426204-426233)
chr8 (1-30)||(896010-896039)
chr8 (4-61)||(5924916-5924973)
chr8 (1-30)||(22767233-22767262)
chr8 (221-258)||(23854081-23854118)
chr8 (1-78)||(33817260-33817337)
chr8 (19-81)||(33854726-33854784)
chr8 (4-41)||(35937440-35937477)
chr8 (1-77)||(102348-102424)
chr8 (1-41)||(154393-154433)
chr8 (1-41)||(2597088-2597128)
chr8 (1-29)||(27631050-27631078)
chr8 (1-81)||(43602311-43602391)
[»] chr3 (63 HSPs)
chr3 (1-86)||(49457668-49457753)
chr3 (1-83)||(50294011-50294092)
chr3 (1-82)||(36869724-36869805)
chr3 (1-82)||(40785586-40785667)
chr3 (1-81)||(47276388-47276468)
chr3 (1-83)||(27198040-27198122)
chr3 (1-84)||(36799501-36799584)
chr3 (1-82)||(1901814-1901894)
chr3 (1-82)||(1911260-1911340)
chr3 (1-82)||(42102340-42102421)
chr3 (5-77)||(45528836-45528909)
chr3 (1-83)||(1295435-1295516)
chr3 (1-84)||(25959428-25959510)
chr3 (4-83)||(35987347-35987426)
chr3 (1-84)||(44593069-44593151)
chr3 (1-83)||(7867596-7867677)
chr3 (1-83)||(46473231-46473312)
chr3 (1-82)||(31326811-31326891)
chr3 (1-82)||(32795939-32796019)
chr3 (1-90)||(34627954-34628043)
chr3 (1-78)||(35376442-35376519)
chr3 (5-77)||(53715422-53715494)
chr3 (1-84)||(50279972-50280055)
chr3 (1-83)||(32981008-32981089)
chr3 (1-75)||(44127086-44127160)
chr3 (4-85)||(22153970-22154050)
chr3 (4-80)||(981576-981651)
chr3 (1-81)||(37035719-37035799)
chr3 (1-41)||(41717366-41717406)
chr3 (1-80)||(462291-462369)
chr3 (1-84)||(11173553-11173635)
chr3 (1-84)||(11327211-11327294)
chr3 (1-81)||(8868975-8869052)
chr3 (1-79)||(53870673-53870751)
chr3 (1-82)||(13159764-13159845)
chr3 (1-66)||(26021962-26022027)
chr3 (1-78)||(32931809-32931886)
chr3 (1-41)||(7142-7182)
chr3 (1-81)||(1031316-1031395)
chr3 (1-81)||(20216051-20216131)
chr3 (1-85)||(34021347-34021431)
chr3 (1-41)||(43409293-43409333)
chr3 (2-82)||(47683894-47683974)
chr3 (1-75)||(7231901-7231974)
chr3 (4-34)||(29800484-29800514)
chr3 (1-51)||(36819059-36819109)
chr3 (1-30)||(8066458-8066487)
chr3 (1-42)||(12762870-12762911)
chr3 (1-30)||(33007463-33007492)
chr3 (1-82)||(34607807-34607887)
chr3 (1-30)||(37215170-37215199)
chr3 (1-30)||(39604185-39604214)
chr3 (1-82)||(42755758-42755839)
chr3 (4-84)||(45150150-45150231)
chr3 (1-30)||(47849773-47849802)
chr3 (1-29)||(28300586-28300614)
chr3 (1-77)||(29525334-29525410)
chr3 (1-49)||(30633734-30633782)
chr3 (1-41)||(32656078-32656118)
chr3 (1-29)||(35554055-35554083)
chr3 (1-81)||(41877791-41877871)
chr3 (1-81)||(52453980-52454060)
chr3 (1-41)||(54233429-54233469)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-81)||(16483-16562)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-81)||(56282-56361)
[»] scaffold0166 (1 HSPs)
scaffold0166 (5-84)||(34942-35020)
[»] scaffold0241 (1 HSPs)
scaffold0241 (4-85)||(5335-5416)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-81)||(18179-18258)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-81)||(17218-17298)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-77)||(204339-204415)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-82)||(147143-147224)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-41)||(11295-11335)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-51)||(29728-29778)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-75)||(15084-15156)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-75)||(18107-18179)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-83)||(249028-249110)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-42)||(60570-60611)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-41)||(31528-31568)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-29)||(113728-113756)
[»] scaffold0005 (1 HSPs)
scaffold0005 (13-81)||(224115-224183)


Alignment Details
Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 85 - 259
Target Start/End: Original strand, 23332445 - 23332616
Alignment:
Q  85 gtttaattagactctattcaaaattgactatactaattttagttcaattctatattgtataaatggtgtataaatgagccgatttgtatacctgatgttt 184  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  |||| ||||| |||||||||    
T  23332445 gtttaattagactgtattcaaaattgacaatactaattttagttcaattctatgttgtataaatggtgtataaatgagatgattcgtatatctgatgttt 23332544  T
Q  185 taaggtttaagatatatatgtgatgtcctcggattttggtgattcagaattctatgttattatttctagtattat 259  Q
    |||| ||||||||| ||||||||||||||||||   |||||||||| |||| ||||||||| ||| || ||||||    
T  23332545 taagatttaagatacatatgtgatgtcctcgga---tggtgattcaaaattgtatgttattgtttttattattat 23332616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48325325 - 48325407
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  48325325 ttgtttttgaccaatgagaagagagaaaaaggaggttgtcattgaagttgttagcaaatggttgttaaaatatcactgctctt 48325407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 16987550 - 16987630
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||||||| ||||||||||||||    
T  16987550 ttgtttttgaccaatgaaaagagagaaaaaggaggttgtcatagaaattgttagcaaatggttgttcaaatatcattgctc 16987630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 21255753 - 21255672
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||||| ||||||||||||| ||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  21255753 ttgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctct 21255672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29254034 - 29253953
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  29254034 ttgtttttgatcaatgagaagagagaaaaaggaggttgtcattgaagttgttagcaaatagttgttcaaatatcattgctct 29253953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 40605385 - 40605308
Alignment:
Q  5 ttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  40605385 ttttgaccaatgagaagagagaaaaagaaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctct 40605308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 25988954 - 25988874
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| |||| |||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  25988954 ttgtttttgaccaataaaaaaagagaaaaaggaggttatcattaaagttgttagcaaatggttgttaaaatatcattgctc 25988874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43640955 - 43640875
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||||||||||||||  ||||||||||  ||||||||| |||||||||||| ||||||||||||||    
T  43640955 ttgtttttgaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 43640875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47059858 - 47059778
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||||||||| |||||||||||| ||||||||||||||    
T  47059858 ttgtttttgaccaatgaaaagagagaaaaataagattgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 47059778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23554854 - 23554945
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgtttaatt 92  Q
    |||||||| |||||||||| ||||||||||  ||||||||||  ||||||||| |||||||||||| ||||||||||||||| | |||||||    
T  23554854 ttgtttttaaccaatgaaaggagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctctatttttaatt 23554945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4604632 - 4604711
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||||||||||||||||||||||||||||||||   | |||| |||||||| |||||| ||||||||||||||    
T  4604632 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaacaggttg-taccaaatcgttgttcaaatatcattgctc 4604711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25702181 - 25702097
Alignment:
Q  1 ttgtttttgaccaatgaaaagaga-gaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| |||| ||| ||||||  ||||| ||||||||||||||| |||||||||||||||||||||| |||||||    
T  25702181 ttgtttttgaccaataaaaaaagaagaaaaaagaggttatcattgaagttgttagcaaatggttgttaaaatatcatcgctcttt 25702097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36930724 - 36930642
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| |||||||||||||||||||||||||   | |||| ||| ||||||||||| |||||||||||||||||    
T  36930724 ttgtttttgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttg-tacaaaatggttgttcaaatatcattgctcttt 36930642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 48872482 - 48872563
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| || |||||||||||| ||||||||||||||||    
T  48872482 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-tatcaaatggttgttcaaatatcattgctctt 48872563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44730747 - 44730827
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||| ||||||||||| ||||||||||||||||||||   | |||| ||||||||||||||| |||||||||||||||    
T  44730747 ttgtttttaaccaatgaaaaaagagaaaaagaaggttgtcaaaaaggttg-taccaaatggttgttcaaatatcattgctct 44730827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25098756 - 25098683
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| ||||||||||||||| |||||||||||    
T  25098756 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtca---aggttg-taccaaatggttgttcaaatatcattg 25098683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27352733 - 27352815
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||||||||||||||||||||  |||||||||    | |||| ||||||||||||||| |||||||||||||||||    
T  27352733 ttgtttttgaccaatgaaaagagagaaaagaaaggttgtcgaataggttg-taccaaatggttgttcaaatatcattgctcttt 27352815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 51339668 - 51339590
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| |||||||| |||||| |||||||||||||    
T  51339668 ttgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taccaaatagttgttcaaatatcattgct 51339590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 50528025 - 50527944
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||||||||||||||||||||||||||||||||   |  ||| || |||||||||||| |||||| |||||||||    
T  50528025 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaatagattg-tagcaaatggttgttcaaatatgattgctctt 50527944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 25061836 - 25061916
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||| ||||||||||||||||||||||||||||||||   |  ||| || |||||||||||| |||||||||||||||    
T  25061836 ttgtttttaaccaatgaaaagagagaaaaagaaggttgtcaaatagattg-tatcaaatggttgttcaaatatcattgctct 25061916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 35043685 - 35043608
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||| |||||| ||||||||||||||  ||||||||||  || |||||| |||||||||||| ||||||||||||||    
T  35043685 tttttaaccaataaaaagagagaaaaatgaggttgtcatgaaaattgttagcaaatggttgttcaaatatcattgctc 35043608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 17526526 - 17526606
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||| ||||||||||||||  || |||||||  || |||||| |||||| ||||| |||||||||||||||||    
T  17526526 tttttgaccaataaaaagagagaaaaatgagattgtcataaaaattgttagcaaatgattgttcaaatatcattgctcttt 17526606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32966370 - 32966450
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| ||||||||||||||  |||||||||   |||||||||  |||| |||||| ||||||||||||||    
T  32966370 ttgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgttagtaaatagttgttcaaatatcattgctc 32966450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 32216517 - 32216593
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||| |||||||||| |||| |||||||| |||||||||||| |||  ||||| |||||||||||| ||||    
T  32216517 tttttgaccaattaaaagagagagaaaggaggttgtctttgaagttgttagcaa--ggttggtaaaatatcattactct 32216593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 49621464 - 49621546
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| ||||||||||||| |||| ||||||   |  ||| ||||||||||||||| |||||||||||||||||    
T  49621464 ttgtttttgaccaataaaaagagagaaaatgaagattgtcaaatagattg-taccaaatggttgttcaaatatcattgctcttt 49621546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13813661 - 13813743
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| | |||||||||||| |||||||||| | |||||||||   ||||| |||  ||||||||||||||||    
T  13813661 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctctt 13813743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25995563 - 25995613
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  25995563 ttgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgt 25995613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32821738 - 32821814
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    |||||||| |||||||||||||||||||| ||| |||||||   ||||| ||| |||||||||||| |||||||||||    
T  32821738 ttgttttttaccaatgaaaagagagaaaatgaatgttgtcaaataagtt-ttatcaaatggttgttcaaatatcattg 32821814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30530542 - 30530471
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatat 73  Q
    ||||||||||||||||||||||||||||| ||| |||||||   | |||| ||||||||||||||| ||||||    
T  30530542 ttgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataggttg-taccaaatggttgttcaaatat 30530471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 38019467 - 38019389
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||| | || |||||||||||||||||||| | || ||| ||||||||||||||| |||||||| ||||||||    
T  38019467 tttttgaccaataacaaaagagaaaaagaaggttgtca-tcaaattg-taccaaatggttgttcaaatatcactgctcttt 38019389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8934502 - 8934429
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||||||||||| | || |||||||||||| |||||||| ||| |||| | |||||||||||| ||||||||    
T  8934502 ttgtttttgaccaataagaaaagagaaaaagaaagttgtcatagaaattgtca-caaatggttgttcaaatatca 8934429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 14002707 - 14002621
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgtttaa 90  Q
    ||||| |||||||||||||||||||||  |  |||||||  ||||||||| ||||| |||||| |||||||| | |||||| |||||    
T  14002707 tttttaaccaatgaaaagagagaaaaatgaaattgtcataaaagttgttagcaaatagttgttcaaatatcactactctttctttaa 14002621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26501398 - 26501448
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||    
T  26501398 ttgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgt 26501448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30687155 - 30687236
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||| | |||||| ||| ||||| |||||||||||||   || |||| |||||||||||||| ||||||||||||||||    
T  30687155 ttgtttttaaacaatgagaagggagaagaagaaggttgtcaaaaaatttgt-accaaatggttgttcaaatatcattgctctt 30687236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6841894 - 6841935
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcat 42  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  6841894 ttgtttttgaccaataaaaagagagaaaaagaaagttgtcat 6841935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 22389490 - 22389412
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||||||||||||||||||  | |||||||   ||||||  | |||||||||||| |||||||||| ||||||    
T  22389490 tttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg--atcaaatggttgttcaaatatcattactcttt 22389412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40596022 - 40595942
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||||||||||||||||||||| |   ||||||   | |||| || |||||||||||| |||||||||||||||    
T  40596022 ttgtttttgaccaatgaaaagagagaaaaaaattattgtcaaaaaggttg-tatcaaatggttgttcaaatatcattgctct 40595942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34941888 - 34941808
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||| |||  | ||||||||  ||||||| | ||||||||| |||||||| ||||||||    
T  34941888 ttgtttttgaccaataagaagagagagaaatgaagttgtcataaaagttgtaaacaaatggttcttaaaataccattgctc 34941808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 36230273 - 36230197
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    |||||||| ||| |||| |||||||||||| ||||||||  || ||||||  |||| |||||| |||||||||||||    
T  36230273 tttttgactaataaaaaaagagaaaaagaaagttgtcataaaaattgttagaaaatagttgttcaaatatcattgct 36230197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37947188 - 37947112
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||||| ||||||||| || |||||||||    ||||||| || |||| |||||| ||||||||||    
T  37947188 ttgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaatatcatt 37947112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43612050 - 43611971
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||||||||||| | |||| || |||   | |||| ||||||||||||| | ||||||||||||||    
T  43612050 ttgtttttgaccaatgaaaagagagaagaggaagattatcaaataggttg-taccaaatggttggtcaaatatcattgctc 43611971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51168736 - 51168660
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    |||||||| |||||| | || ||||||||| ||  |||||||  ||||||||| |||||||||||| ||||||||||    
T  51168736 ttgtttttaaccaataagaaaagagaaaaaaaaaattgtcataaaagttgttagcaaatggttgttcaaatatcatt 51168660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 11460900 - 11460978
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||| |||||| ||| ||||||||||||||   |||||| || ||||| |||||| |||||||||| |||||    
T  11460900 tttttgaccaataaaaagaaagagaaagaaggttgtcaaaaaagttg-tatcaaattgttgttcaaatatcattcctctt 11460978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19920865 - 19920948
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| | |||||||||||| || |||||||   |||||||    |||||| ||| ||||||||||||||||||    
T  19920865 ttgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctcttt 19920948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 587002 - 587084
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||| ||| |||| |||||||||  || ||||||   |||||||||  |||| |||||| ||||||||||||||||    
T  587002 ttgtttttgacaaataaaaacagagaaaaatgagattgtcacaaaagttgttagtaaatagttgttcaaatatcattgctctt 587084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 5609488 - 5609526
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  5609488 tggtgattcagaattctatgctattgtttctagtattat 5609526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25130806 - 25130856
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| | |||||||||||| |||||||||| | |||||||    
T  25130806 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 25130856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 40238544 - 40238622
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||| | |  |||||||||  ||||||||||  ||||||||| |||||| ||||| |||||| ||||||||    
T  40238544 tttttgaccaataatagaagagaaaaaagaggttgtcatcaaagttgttaacaaatgattgttcaaatatgattgctct 40238622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6313706 - 6313787
Alignment:
Q  1 ttgtttttgaccaatg-aaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||| ||||||| |||| |||| ||||  || |||||||| ||||||||| |||||| ||||| ||||||||| ||||    
T  6313706 ttgttttttaccaatgaaaaaaagagtaaaatgagtttgtcattaaagttgttagcaaatgattgttcaaatatcatagctc 6313787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16658542 - 16658627
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaa----tggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| |||| |||||||| |||||||||||   | |||| |||||||    |||||||| ||||||||||||||||    
T  16658542 ttgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttg-taccaaataattggttgttcaaatatcattgctctt 16658627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 39010917 - 39010946
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  39010917 ttgtttttgaccaatgaaaagagagaaaaa 39010946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 42299153 - 42299116
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  42299153 tttttgaccaataaaaagagagaaaaagaagattgtca 42299116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 52109602 - 52109639
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtatta 258  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  52109602 tggtgattcggaattctatgttattgtttctagtatta 52109639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 366760 - 366800
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||| |||| || |||||||    
T  366760 ttgtttttgaccaatgaaaagagaggaaaaaaaagttgtca 366800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 6829750 - 6829670
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||| | |||||||||||| ||| |||||| | ||||||| |   ||||| |||  |||||||||||||||||    
T  6829750 tttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctcttt 6829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7203812 - 7203772
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||||||  ||||||||||||| ||||||||||    
T  7203812 ttgtttttgaccaatagaaagagagaaaaacaaggttgtca 7203772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 7645520 - 7645492
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  7645520 ttgtttttgaccaatgaaaagagagaaaa 7645492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 24538638 - 24538674
Alignment:
Q  223 gtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||| | ||||||||||||||||||    
T  24538638 gtgattcagaattctacgctattatttctagtattat 24538674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25302613 - 25302573
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||| ||||||||||||||||||||| || |||||||    
T  25302613 ttgtttttaaccaatgaaaagagagaaaaaaaaagttgtca 25302573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 27327871 - 27327843
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  27327871 ttgtttttgaccaatgaaaagagagaaaa 27327843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31480103 - 31480063
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||| ||||||||||||||||||||| || |||||||    
T  31480103 ttgtttttaaccaatgaaaagagagaaaaaaaaagttgtca 31480063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 35846844 - 35846764
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||| |||| || |||| || |||  ||||| ||||  ||||||||| |||||||||||| ||||||||||| |||||    
T  35846844 tttttgatcaataaatagagtgagaaatgaggttatcataaaagttgttagcaaatggttgttcaaatatcattgttcttt 35846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41885824 - 41885864
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| | || ||||||||||||||||||||    
T  41885824 ttgtttttgaccaatcagaatagagaaaaagaaggttgtca 41885864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42843312 - 42843272
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| | |||||||||||| ||||||||||    
T  42843312 ttgtttttgaccaataagaagagagaaaaacaaggttgtca 42843272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 52368767 - 52368819
Alignment:
Q  26 aaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    |||||||||||||||||  ||||| ||  |||||||||||| |||||||||||    
T  52368767 aaaaagaaggttgtcataaaagttattggcaaatggttgtttaaatatcattg 52368819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 8352939 - 8353020
Alignment:
Q  2 tgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8352939 tgtttttgatcaatgagaagagagaaaaagaaggttgtcattgaagttgttagcaaatggttgttaaaatatcattgctctt 8353020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36763488 - 36763407
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||||||||||||||||||||||||||||||  || |||||| |||||||||||| |||||||||||||||    
T  36763488 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcataaaaattgttaacaaatggttgttcaaatatcattgctct 36763407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 34913194 - 34913273
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||| |||||| ||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34913194 tttttgaacaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaatggttgttaaaatatcattgctctt 34913273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23358547 - 23358467
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23358547 ttgtttttgaccaatgagaagagagaaaaaga-gattgtcattgaagttgttagcaaatggttgttaaaatatcattcctct 23358467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 1574559 - 1574637
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||||||||||||| ||||  ||||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  1574559 tttttgaccaatgaaaagagagtaaaatgaggttgtcattaaagttgttagcaaatggttgttcaaatatcattgctct 1574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37631335 - 37631255
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||| ||||||||||||  ||||||||||  ||||||||| |||||||||||| ||||||||||||||    
T  37631335 ttgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 37631255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8555260 - 8555177
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||| |||||||||||||||||||| ||||||||||  ||||||||  |||||  ||||| |||||||||||||||||    
T  8555260 ttgtttttgatcaatgaaaagagagaaaaaggaggttgtcataaaagttgttggcaaataattgttcaaatatcattgctcttt 8555177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 1052455 - 1052381
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    |||||||| ||| | ||||||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1052455 tttttgactaataagaagagagaaaaatgaggttgtcattaaagttgttagcaaatggttgttaaaatatcattg 1052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30856910 - 30856986
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    |||||||||||||||||||||||||||||||||||||||||   || ||| ||||||||||||||| | |||||||||    
T  30856910 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaataaattg-taccaaatggttgttcatatatcattg 30856986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 28165235 - 28165315
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||| |||||||||| ||| |||||||||||  ||||||||| |||||||||||| |||||| ||| ||||||    
T  28165235 tttttgaccaataaaaagagagagaaaaaaggttgtcatgaaagttgttagcaaatggttgttcaaatattatttctcttt 28165315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5167710 - 5167628
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||| |||||||||||  | || |  ||||||||||||||| |||||||||||| ||||    
T  5167710 ttgtttttgaccaatgaaaagagagaaaatgaaggttgtca-agtaggttataccaaatggttgttcaaatatcattgcacttt 5167628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 694372 - 694452
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||||||||||| ||||| |||  ||||||||||  ||||| ||| |||||| ||||| ||||||||||||||    
T  694372 ttgtttttgaccaatgaaaaaagagataaatgaggttgtcataaaagttattagcaaatgattgttcaaatatcattgctc 694452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3959999 - 3960078
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    |||||||||| |||||||||||||||||||  |  |||||||  ||||||||  |||||||||||| |||||||||||||    
T  3959999 ttgtttttgatcaatgaaaagagagaaaaatgaaattgtcataaaagttgttcgcaaatggttgttcaaatatcattgct 3960078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19668155 - 19668073
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||| ||||||| |||   | |||| || |||||||||||| |||||||||||| ||||    
T  19668155 ttgtttttgaccaatgaaaagagagaaaaggaaggttatcaaataggttg-tatcaaatggttgttcaaatatcattgcccttt 19668073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 40951293 - 40951375
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||| |||||||||||||||||||| |||||||||||   | |||| |||| |||||||||| | |||||||||||||||    
T  40951293 ttgttttttaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-tacctaatggttgttcatatatcattgctcttt 40951375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43791759 - 43791676
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| ||||||||||||| | |||||||||   ||||||| || ||| ||||||| |||||||||| ||||||    
T  43791759 ttgtttttgaccaataaaaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactcttt 43791676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 21805750 - 21805673
Alignment:
Q  5 ttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||  ||||||||| |||||||||||||   |  |||| |||||||||||||||||||||||||||||||    
T  21805750 ttttgaccaatgggaagagagaataagaaggttgtcaaaaagattgt-accaaatggttgttaaaatatcattgctctt 21805673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44059691 - 44059609
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| ||||||||||||||| |||||||||   ||||| | | |||||||||||| |||||| ||| |||||    
T  44059691 ttgtttttgaccaattaaaagagagaaaaagtaggttgtcacaaaagttatcatcaaatggttgttcaaatataattactctt 44059609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 10983591 - 10983531
Alignment:
Q  21 gagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||| |||||||||  | |||||| ||||||||||||||||||||| |||||    
T  10983591 gagagaaaaagaaagttgtcattatacttgttagcaaatggttgttaaaatatcaatgctc 10983531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 12130676 - 12130638
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12130676 tggtgattcagaattctatgctattatttctagtattat 12130638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27307213 - 27307131
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||||    
T  27307213 ttgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatggaatggatgtataaatatcattgctctt 27307131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36582359 - 36582441
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| | || ||||||||| ||||||||||   ||||||| | ||||||| |||  ||||||||||||||||    
T  36582359 ttgtttttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatcattgctctt 36582441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 41493188 - 41493254
Alignment:
Q  12 caatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||||||||||||| |||  || ||||||| |||||||||| |||||| ||||| |||||||||||    
T  41493188 caatgaaaagagagagaaatgagattgtcatagaagttgttagcaaatgattgttcaaatatcattg 41493254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15283217 - 15283137
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| |||| |||||||| |||||||||||   || ||| ||| |||||||| || |||||||||||||||    
T  15283217 ttgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataaattg-tacgaaatggttattcaaatatcattgctct 15283137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37966459 - 37966536
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |  |||||| |||  |||||||||||    
T  37966459 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattg 37966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4842487 - 4842447
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  4842487 ttgtttttgaccaatgaaaaaagagaaaatgaaggttgtca 4842447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10288255 - 10288295
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  10288255 ttgtttttgaccaatgaaaagagagaaaaggaagattgtca 10288295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23048051 - 23047971
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||    
T  23048051 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 23047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36383565 - 36383617
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgtta 53  Q
    ||||||||||||||| | |||||||||||| |||||||||| | |||||||||    
T  36383565 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtta 36383617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6365289 - 6365340
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgtt 52  Q
    ||||||||||||||| ||||||||||||||  ||||||||||  ||||||||    
T  6365289 ttgtttttgaccaataaaaagagagaaaaaagaggttgtcataaaagttgtt 6365340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 1418019 - 1417981
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  1418019 tggtgattcagaattctatgctattgtttctagtattat 1417981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6851627 - 6851585
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcatt 43  Q
    ||||||||||||||| |||||||||||||| || |||||||||    
T  6851627 ttgtttttgaccaatcaaaagagagaaaaacaaagttgtcatt 6851585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11828788 - 11828706
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||||||||||||| | || ||||||||| |  |||||||  | |||  |||||| |||||||||| |||||    
T  11828788 ttgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactctt 11828706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32755781 - 32755855
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||||||||||| |||||||||||||| |||| ||||    ||||||| || ||||||||||  ||||||||    
T  32755781 ttgtttttgaccaatcaaaagagagaaaaataaggctgtctcaaaagttgtcacaaaatggttgtagaaatatca 32755855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35792424 - 35792386
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgt 39  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  35792424 ttgtttttgactaatgaaaagagagagaaagaaggttgt 35792386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 42251884 - 42251815
Alignment:
Q  5 ttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||||||||||||||||||||||  | |||||||   |||||||| ||||||| ||||| ||||||||    
T  42251884 ttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgtt-ccaaatgattgtttaaatatca 42251815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42665780 - 42665707
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||| |||||||||||| |||| ||| ||| ||||||||  |||||| ||||||||||||||  ||||||||    
T  42665780 ttgttttggaccaatgaaaaaagagcaaatgaaagttgtcatcaaagttg-taccaaatggttgtacaaatatca 42665707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 1889250 - 1889279
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  1889250 ttgtttttgaccaatgaaaagagagaaaaa 1889279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 3091844 - 3091873
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  3091844 ttgtttttgaccaatgaaaagagagaaaaa 3091873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4432430 - 4432510
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| | |||||||||||| || |||| || ||||||||| |  |||| | ||| ||||||||||||||||    
T  4432430 ttgtttttgaccaataagaagagagaaaaacaaagttgacactgaagttgtcattaaat-gatgtcaaaatatcattgctct 4432510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 10550427 - 10550346
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| |||| ||||||||| || |||||||   ||||||| | ||||||| |||  |||||||||| ||||    
T  10550427 ttgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 13104582 - 13104611
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  13104582 ttgtttttgaccaatgaaaagagagaaaaa 13104611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 14140307 - 14140278
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  14140307 ttgtttttgaccaatgaaaagagagaaaaa 14140278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 25801779 - 25801750
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  25801779 ttgtttttgaccaatgaaaagagagaaaaa 25801750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 29795539 - 29795568
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  29795539 ttgtttttgaccaatgaaaagagagaaaaa 29795568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 32750101 - 32750130
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  32750101 ttgtttttgaccaatgaaaagagagaaaaa 32750130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 34249683 - 34249712
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  34249683 ttgtttttgaccaatgaaaagagagaaaaa 34249712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 36376819 - 36376790
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  36376819 ttgtttttgaccaatgaaaagagagaaaaa 36376790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 39454215 - 39454186
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  39454215 ttgtttttgaccaatgaaaagagagaaaaa 39454186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45515567 - 45515534
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaag 34  Q
    |||||||| |||||||||||||||||||||||||    
T  45515567 ttgtttttaaccaatgaaaagagagaaaaagaag 45515534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4263832 - 4263760
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatat 73  Q
    ||||||||||||||||| || |||||||||  | ||||||||  || |||||| ||| |||||||| ||||||    
T  4263832 ttgtttttgaccaatgagaaaagagaaaaaagaagttgtcataaaaattgttagcaattggttgttcaaatat 4263760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 13553249 - 13553316
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaata 72  Q
    ||||||||||||||||||||||||||  ||| ||||||   | |||| ||||||||||||||| |||||    
T  13553249 tttttgaccaatgaaaagagagaaaagaaagattgtcaaataggttg-taccaaatggttgttcaaata 13553316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 19637380 - 19637412
Alignment:
Q  52 taccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| |||||||||||||||||    
T  19637380 taccaaatggttgttcaaatatcattgctcttt 19637412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 19835973 - 19836005
Alignment:
Q  52 taccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| |||||||||||||||||    
T  19835973 taccaaatggttgttcaaatatcattgctcttt 19836005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19913887 - 19913927
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||| ||||||||||||||||||||| || |||||||    
T  19913887 ttgtttttaaccaatgaaaagagagaaaaaaaaagttgtca 19913927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 22845685 - 22845725
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattatct 261  Q
    |||||||||||||||||| | |||| |||||||||||||||    
T  22845685 tggtgattcagaattctaggctattgtttctagtattatct 22845725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44484624 - 44484544
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||||||| || ||||||| | ||||||| |  |||| | |||  ||||||||||||||    
T  44484624 ttgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaattgatgtacaaatatcattgctc 44484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11880955 - 11880875
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  11880955 ttgtttttgaccaatgagaagagagaaaaagaaggttgtcattgaagttgttagcaaatgattgttaaaatatcattgctc 11880875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41460219 - 41460300
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||| |||||||||||||||||||||  ||||||||||  ||||||||| |||||||||||| |||||| ||||||||    
T  41460219 ttgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatattattgctct 41460300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3960137 - 3960057
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||| ||||||||||||| |||||  ||||||||||  ||||||||| |||||||||||| ||||||||||||||    
T  3960137 ttgtttttgatcaatgaaaagagaaaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctc 3960057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9636126 - 9636047
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| ||||||||||||||| ||||||||||||||    
T  9636126 ttgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taccaaatggttgttcaaatatcattgctc 9636047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 24792559 - 24792637
Alignment:
Q  5 ttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||| |||||||||||   | |||| ||||||||||||||| |||||||||||||||||    
T  24792559 ttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taccaaatggttgttcaaatatcattgctcttt 24792637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23991334 - 23991410
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||||||||||||||||||  ||||| |||   ||||||||| |||||||||||| ||||||||||    
T  23991334 ttgtttttgaccaatgaaaagagagaaaaatgaggttctcaaaaaagttgttagcaaatggttgttcaaatatcatt 23991410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29803326 - 29803406
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | ||||||||||||| ||||||||||  ||||||||| |||||  ||||| ||||||||||||||    
T  29803326 ttgtttttgaccaataataagagagaaaaaggaggttgtcatcaaagttgttagcaaataattgttcaaatatcattgctc 29803406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 91318 - 91400
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||||||||||||||||||||  ||||||||||   | |||| || |||||||||||| |||||||||||||||||    
T  91318 ttgtttttgaccaatgaaaagagagaaaagaaaggttgtcaaataggttg-tatcaaatggttgttcaaatatcattgctcttt 91400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11464091 - 11464008
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| |||||||||||||| |||||||||| | |||||||||   ||||| |||  |||||||||||||||||    
T  11464091 ttgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcattgctcttt 11464008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26626787 - 26626705
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| | || ||||||||| |||||||||||  |||||| || |||||||||||| |||||||||||||||||    
T  26626787 ttgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttg-taacaaatggttgttcaaatatcattgctcttt 26626705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5996768 - 5996850
Alignment:
Q  1 ttgtttttgaccaatgaaaagagaga-aaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||| | |||||| |||||||| ||||| | ||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  5996768 ttgttttttatcaatgagaagagagagaaaaggaagttgtcattgaagttgttagcaaatagttgttaaaatatcactgctct 5996850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17063968 - 17064050
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||| ||||||||||||||||| |||  ||||||||||  ||||||||| |||||| ||||| || |||||||||||||    
T  17063968 ttgtttttaaccaatgaaaagagagagaaatgaggttgtcataaaagttgttagcaaatgattgttcaagtatcattgctctt 17064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41210482 - 41210412
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaat 71  Q
    ||||||||||||||| | ||||||||||||| ||||||||||  ||||||||| |||||||||||| ||||    
T  41210482 ttgtttttgaccaataagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaat 41210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5698296 - 5698216
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| | || |||||||||||||||||||||  |||||| ||||||||| |||||  ||||||||||||||    
T  5698296 ttgtttttgaccaataacaaaagagaaaaagaaggttgtcatgaaagttg-taccaaatgattgttctaatatcattgctct 5698216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 582837 - 582758
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||||||||||||||||| ||||||||||||||   |  ||| ||||||||| ||||| ||||||||||||||    
T  582837 ttgtttttgaccaatgaaaagagagagaaagaaggttgtcaaaaatcttg-taccaaatgattgttcaaatatcattgctc 582758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26627433 - 26627512
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||| | | || |||||||||||||||||||||  |||||| |||||||| |||||| ||||||||||||||    
T  26627433 ttgtttttgaccattaataaaagagaaaaagaaggttgtcatgaaagttg-taccaaatagttgttcaaatatcattgctc 26627512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36581435 - 36581355
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| |||||||| |||| |||||||||||   | |||| ||| ||||||||||| |||||||||||||||    
T  36581435 ttgtttttgaccaataaaaagagaaaaaatgaaggttgtcaaataggttg-tacaaaatggttgttcaaatatcattgctct 36581355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7144678 - 7144757
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||| ||||||||| |||||||||||||||||||||||||   | |||| || |||||||||| | ||||||||||||||    
T  7144678 ttgttattgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttg-tatcaaatggttgctcaaatatcattgctc 7144757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39595377 - 39595452
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||||||||||||||||||  | |||||||   |||||| || |||||||||||| ||||||||||    
T  39595377 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatggttgttcaaatatcatt 39595452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15639488 - 15639568
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||| || |||||||| ||| ||||| |||||||||||||   | ||||| |||||||||||||| |||||||||||||||    
T  15639488 ttgttcttcaccaatgagaagggagaagaagaaggttgtcaaaaaggttgt-accaaatggttgttcaaatatcattgctct 15639568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34428265 - 34428342
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaaga-aggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||||| |||||| ||||| | || || |||| |||||||||| ||||||||| || ||||||||||    
T  34428265 ttgtttttgaccaatgataagagaaaaaaaaagagattatcatagaagttgttagcaaatggttattcaaatatcatt 34428342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4954569 - 4954649
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||| || | |||||||||||| |||||||||| | |||||||||   ||||| |||  ||||||||||||||    
T  4954569 ttgtttttgacccataagaagagagaaaaacaaggttgtcactaaagttgttatagaatggatgtagaaatatcattgctc 4954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12612985 - 12612909
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||||| ||||||||| || |||||||||    |||||||  | ||||||||||| ||||||||||    
T  12612985 ttgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcatt 12612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13734328 - 13734288
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  13734328 ttgtttttgaccaatgaaaagagagaaaaggaaagttgtca 13734288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15622147 - 15622227
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||    
T  15622147 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 15622227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28811531 - 28811571
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  28811531 ttgtttttgaccaatgaaaagagagaaaaaagaggttgtca 28811571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3770992 - 3770953
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtc 40  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  3770992 ttgtttttgaccaataaaaagagagaaaaagaaggctgtc 3770953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8959263 - 8959302
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtc 40  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  8959263 ttgtttttgaccaataaaaagagagaaaaacaaggttgtc 8959302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9594581 - 9594664
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| | |||||||| ||| |||||||||| | ||||||| |   ||||| |||  |||||||||||||||||    
T  9594581 ttgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctcttt 9594664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12512896 - 12512979
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| | |||||||||||| ||| |||||| | ||||||| |   ||||| |||  |||||||||||||||||    
T  12512896 ttgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaatatcattgctcttt 12512979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 125195 - 125268
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||||||||||||||||||||||||||  | ||||||    |||||| || |||||||||||| ||||||||    
T  125195 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttg-tatcaaatggttgttcaaatatca 125268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12401295 - 12401345
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| | |||||||||||| |||||||||| | |||||||    
T  12401295 ttgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgt 12401345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 15988787 - 15988749
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  15988787 tggtgattcggaattctatgttattgtttctagtattat 15988749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20040889 - 20040927
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgt 39  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  20040889 ttgtttttgaccaatgagaagagagaagaagaaggttgt 20040927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 20040927 - 20040969
Alignment:
Q  52 taccaaatggttgttaaaatatcattgctctttgtttaattag 94  Q
    ||||||||||||||| ||||||||||||||||| |||| ||||    
T  20040927 taccaaatggttgttcaaatatcattgctctttatttagttag 20040969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20125493 - 20125543
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||  |||||||    
T  20125493 ttgtttttgaccaatgagaagagagaaaatgaaagttgtcatcaaagttgt 20125543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 25730957 - 25730995
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  25730957 tggtgattaagaattctatgttattgtttctagtattat 25730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28501720 - 28501770
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| | |||||||||||| |||||||||| | |||||||    
T  28501720 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 28501770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 32732034 - 32731996
Alignment:
Q  52 taccaaatggttgttaaaatatcattgctctttgtttaa 90  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  32732034 taccaaatggttgttcaaatatcattgctctttatttaa 32731996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33823662 - 33823612
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| | |||||||||||| |||||||||| | |||||||    
T  33823662 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 33823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 34652292 - 34652254
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  34652292 tggtgattcagaattatatgttattgtttctagtattat 34652254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 3263473 - 3263396
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||    
T  3263473 tttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 3263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 7077304 - 7077227
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||| |||||||||||||| || |||||||   ||||||| |  |||||| |||  ||||||||||||||    
T  7077304 tttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 7077227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 11666282 - 11666311
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  11666282 ttgtttttgaccaatgaaaagagagaaaaa 11666311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 12660466 - 12660503
Alignment:
Q  222 ggtgattcagaattctatgttattatttctagtattat 259  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  12660466 ggtgattcagaattctatgatattgtttctagtattat 12660503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 19376100 - 19376071
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  19376100 ttgtttttgaccaatgaaaagagagaaaaa 19376071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 19824167 - 19824126
Alignment:
Q  36 ttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||| |||||||||| |||||||||||| ||||||||||    
T  19824167 ttgtcatagaagttgttaacaaatggttgttcaaatatcatt 19824126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28904095 - 28904180
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaa----tggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| |||| |||||||| |||||||||||   | |||| |||||||    |||||||| ||||||||||||||||    
T  28904095 ttgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttg-taccaaataattggttgttcaaatatcattgctctt 28904180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28940490 - 28940575
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaa----tggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| |||| |||||||| |||||||||||   | |||| |||||||    |||||||| ||||||||||||||||    
T  28940490 ttgtttttgaccaataaaaaaagagaaaaggaaggttgtcaaataggttg-taccaaataattggttgttcaaatatcattgctctt 28940575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33567207 - 33567178
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  33567207 ttgtttttgaccaatgaaaagagagaaaaa 33567178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 34381115 - 34381144
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  34381115 ttgtttttgaccaatgaaaagagagaaaaa 34381144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 41940773 - 41940732
Alignment:
Q  223 gtgattcagaattctatgttattatttctagtattatctacc 264  Q
    |||||||||||||||||| |||| ||||||||||||| ||||    
T  41940773 gtgattcagaattctatgctattgtttctagtattatttacc 41940732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3723044 - 3722981
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgt 65  Q
    ||||||| ||||||| ||||||||||||| ||| ||||||||  |||||| | ||||||||||||    
T  3723044 ttgttttggaccaataaaaagagagaaaatgaaagttgtcatcaaagttg-tcccaaatggttgt 3722981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 6865755 - 6865727
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  6865755 ttgtttttgaccaatgaaaagagagaaaa 6865727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19437360 - 19437400
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| |||||||||||||  ||||||||||    
T  19437360 ttgtttttgaccaatcaaaagagagaaaagaaaggttgtca 19437400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22203810 - 22203850
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| | ||||||||||| |||||||||||    
T  22203810 ttgtttttgaccaataagaagagagaaaaggaaggttgtca 22203850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22920460 - 22920420
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| | |||||||||||| ||||||||||    
T  22920460 ttgtttttgaccaataagaagagagaaaaacaaggttgtca 22920420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25345441 - 25345521
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||||||| ||| |||||| | || ||||||   ||||| |||  ||||||||||||||    
T  25345441 ttgtttttgaccaataagaagagagaaaaataagattgtcactaaaattgttatggaatggatgtacaaatatcattgctc 25345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 36624421 - 36624449
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  36624421 ttgtttttgaccaatgaaaagagagaaaa 36624449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39458744 - 39458784
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||||||||||||||| ||||| || |||||||    
T  39458744 ttgtttttgaccaatgaaaagagataaaaaaaaagttgtca 39458784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 40566185 - 40566157
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  40566185 ttgtttttgaccaatgaaaagagagaaaa 40566157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16743234 - 16743148
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgtt 87  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  16743234 ttgtttttgaccaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaattgttgttaaaatatcattgctctttgtt 16743148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 34490453 - 34490526
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||    
T  34490453 tttttgaccaatgaaaagagagaaaaaggagattgtcattgaagttgttagcaaatggttgttaaaatatcatt 34490526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11742952 - 11742872
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||||||| || |||||| || ||||||||||||||    
T  11742952 ttgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttcttcaaatatcattgctc 11742872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 20712169 - 20712250
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||| ||| || ||||||||||||| |||||||||| |||||||||| |||||||||||| ||||||||| |||||    
T  20712169 ttgtttttgatcaacgagaagagagaaaaaggaggttgtcatagaagttgttaacaaatggttgttcaaatatcatagctct 20712250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 23653861 - 23653776
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgt 86  Q
    |||||||||||| |||| ||||||||||||  ||||||||||  ||||||||| |||||||||||| |||||| ||||||||||||    
T  23653861 ttgtttttgacctatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatggttgttcaaatattattgctctttgt 23653776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12044433 - 12044513
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||| || |||||||||| ||||||||||  ||||||||| || ||||||||| ||||||||||||||    
T  12044433 ttgtttttgaccaatgagaaaagagaaaaaggaggttgtcataaaagttgttagcacatggttgttcaaatatcattgctc 12044513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32644715 - 32644791
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    |||||||| |||||||| ||||||||||||  |||||||||| |||||||||| || ||||||||| ||||||||||    
T  32644715 ttgttttttaccaatgagaagagagaaaaatgaggttgtcatagaagttgttagcacatggttgttcaaatatcatt 32644791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32729992 - 32730074
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||| |||||||||||||||||||||| |||||||   | |||| ||||||||||||||| | |||||||||||||||    
T  32729992 ttgtttttgatcaatgaaaagagagaaaaagaatgttgtcaaataggttg-taccaaatggttgttcatatatcattgctcttt 32730074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 9188911 - 9188834
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||| | ||||||||||||  || || ||||  ||||||||| |||||||||||| ||||||||||||||    
T  9188911 tttttgaccaataagaagagagaaaaatgagattatcataaaagttgttagcaaatggttgtttaaatatcattgctc 9188834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 27334970 - 27335043
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||| |  |||||| |||  ||||||||||    
T  27334970 tttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcatt 27335043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 27395710 - 27395783
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||| |  |||||| |||  ||||||||||    
T  27395710 tttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcatt 27395783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8173280 - 8173201
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||| ||||||||||||||||||||||  ||||||||||   | |||  ||||||||||||||| ||||||||||||||    
T  8173280 ttgtttctgaccaatgaaaagagagaaaagaaaggttgtcaaataggtt-ataccaaatggttgttcaaatatcattgctc 8173201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3339467 - 3339388
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    ||||||||||||||| |||||||||||||| ||| |||||| | ||||||| |  |||||| |||  |||||||||||||    
T  3339467 ttgtttttgaccaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgct 3339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21443791 - 21443873
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||||||||||||||| |||| ||||||||||    |  ||| |||||||| |||||| |||||||||||||||||    
T  21443791 ttgtttttgaccaatgaaaagagataaaatgaaggttgtccaatagattg-taccaaatagttgttcaaatatcattgctcttt 21443873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3660321 - 3660271
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| |||||||||||||| |||||||||| | |||||||    
T  3660321 ttgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgt 3660271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 28107288 - 28107326
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  28107288 tggtgattcagaattctatgttattgtttctagtattat 28107326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1897789 - 1897829
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  1897789 ttgtttttgaccaatgaaaagagagaaaaaagaggttgtca 1897829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11017485 - 11017566
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| | |||||||| ||| |||||||||| | |||||||||   ||||| |||  |||||||| ||||||    
T  11017485 ttgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcactgctct 11017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 29383660 - 29383689
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  29383660 ttgtttttgaccaatgaaaagagagaaaaa 29383689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1803972 - 1804012
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| | |||||||||||| ||||||||||    
T  1803972 ttgtttttgaccaataagaagagagaaaaacaaggttgtca 1804012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2582765 - 2582805
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||| |||||||||||||||||||  |||||||||    
T  2582765 ttgtttttgatcaatgaaaagagagaaaaaagaggttgtca 2582805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15328592 - 15328672
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| ||||||||| |||| || |||||||   ||||||| |  |||||| |||  ||||||||||||||    
T  15328592 ttgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 15328672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16533228 - 16533188
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||| |||||||||||||||||||| ||| |||||||    
T  16533228 ttgttttttaccaatgaaaagagagaaaaggaaagttgtca 16533188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34027999 - 34028075
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||    
T  34027999 ttgtttttgaccaatgagaagagagaaaaaggaggttgtcattgaagttgttatcaaatgattgttaaaatatcatt 34028075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18874892 - 18874808
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttg 85  Q
    ||||||||||||||||| ||||||||||||| ||||||||||  ||||||||| |||||| ||||| ||||||||||||||||||    
T  18874892 ttgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctctttg 18874808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 42510893 - 42510810
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||| |||||||| |||||||||| |||| |||||  ||||||||| |||||||||||| |||||||||||||||||    
T  42510893 ttgtttttgacaaatgaaaatagagaaaaaggaggtcgtcatcaaagttgttagcaaatggttgttcaaatatcattgctcttt 42510810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 46567032 - 46567114
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| ||||||||||||||| |||||||||||||||||    
T  46567032 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taccaaatggttgttcaaatatcattgctcttt 46567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23220438 - 23220522
Alignment:
Q  1 ttgtttttgacc-aatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||| |||||||| |||||||||  ||||||||||  ||||||||| |||||||||||| |||||||||||||||||    
T  23220438 ttgtttttgacccaatgaaaacagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctcttt 23220522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28676122 - 28676043
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||||||||||||||||||||||||||||||||   | |||| ||| ||||||||||| ||||||||||||||    
T  28676122 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaaaaggttg-tacaaaatggttgtttaaatatcattgctc 28676043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 33860514 - 33860435
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    ||||||||||||||| | ||||||||||||  ||||||||||  ||||||||| |||||||||||| |||||||||||||    
T  33860514 ttgtttttgaccaataataagagagaaaaatgaggttgtcatcaaagttgttagcaaatggttgttcaaatatcattgct 33860435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42854044 - 42854126
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||| |||| ||||||||||||  | |||||||| |||||||||| || ||||||||| ||||||||||||||||    
T  42854044 ttgtttttgaccgatgagaagagagaaaaatgaagttgtcatagaagttgttagcacatggttgttcaaatatcattgctctt 42854126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44272780 - 44272698
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| | ||||||||||||| || |||||||  || |||||| |||||||||||| ||||||||||||||||    
T  44272780 ttgtttttgaccaataataagagagaaaaaggagattgtcatcaaaattgttagcaaatggttgttcaaatatcattgctctt 44272698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 44495962 - 44495884
Alignment:
Q  3 gtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||| | |||||| |||||| || ||||||| |||||||||| |||||||||||| ||||||||||||||    
T  44495962 gtttttgaccaataagaagagaaaaaaaggagattgtcatagaagttgttagcaaatggttgttcaaatatcattgctc 44495884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33438148 - 33438227
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| ||||||||||||| ||||||| |||   |||||| ||||||||||||||| ||||||||||||||    
T  33438148 ttgtttttgaccaataaaaagagagaaaatgaaggttatcaaaaaagttg-taccaaatggttgtttaaatatcattgctc 33438227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3475971 - 3476053
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||||||||||||| ||||||| ||||||||||   | ||||| | ||||||||||| ||||||||||| |||||    
T  3475971 ttgtttttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgtcatcaaatggttgtcaaaatatcattactctt 3476053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2613585 - 2613509
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||| |||||||||| |||| || ||||||   ||||||||| |||||||||||| ||||||||||    
T  2613585 ttgtttttgaccaattaaaagagagagaaagtagattgtcacaaaagttgttatcaaatggttgttcaaatatcatt 2613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12638927 - 12639009
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| || ||||| |||||| |||||||||| ||||||    
T  12638927 ttgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taacaaatagttgttcaaatatcatttctcttt 12639009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 34259931 - 34260010
Alignment:
Q  3 gtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||| | |||||||||||||||| ||||||   ||||||| |||||||||||||  |||||||||| ||||    
T  34259931 gtttttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcattactct 34260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 48148482 - 48148552
Alignment:
Q  12 caatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||||||||||  ||||| ||||  ||||||||| |||||||||||| ||||| |||||||||    
T  48148482 caatgaaaagagagaaaaatgaggttatcataaaagttgttagcaaatggttgttcaaataccattgctct 48148552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 55510962 - 55511043
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||| |||||| |||||||| ||| ||| |||   ||||||| |||||||||||||| ||||||||||||||||    
T  55510962 ttgtttttgaccattgaaaatagagaaaaggaaagttttcaaataagttgt-accaaatggttgttcaaatatcattgctctt 55511043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8456006 - 8456046
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  8456006 ttgtttttgaccaataaaaagagagaaaaagaaggttgtca 8456046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9032883 - 9032963
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| |||| ||||||||| |||||||||| | ||||||| |  |||||| |||  ||||||||||||||    
T  9032883 ttgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatcattgctc 9032963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41609640 - 41609564
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||| ||||||||||||||| || ||||||   || |||| | |||||||||||| ||||||||||    
T  41609640 ttgtttttgaccaattaaaagagagaaaaagtagattgtcacaaaaattgtcatcaaatggttgttcaaatatcatt 41609564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3223092 - 3223175
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| | ||||||||||||||||||||||| | ||||| | |   ||||| |||  |||||||||||||||||    
T  3223092 ttgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagttttcatggaatggatgtacaaatatcattgctcttt 3223175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5208295 - 5208212
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  |||||||||||||||||    
T  5208295 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctcttt 5208212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 29655704 - 29655666
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  29655704 tggtgattcagaattctatgttattgtttctagtattat 29655666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44368170 - 44368088
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||| ||| | |||||||||||| |||||||||| | ||||||| |  |||||| |||  ||||||||||||||||    
T  44368170 ttgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctctt 44368088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 51377261 - 51377179
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||||    
T  51377261 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcaaggaatggatgtacaaatatcattgctctt 51377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 16508942 - 16508905
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16508942 tttttgaccaatgaaaagagagaaaatgaaggttgtca 16508905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4896468 - 4896428
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  4896468 ttgtttttgaccaatgaaaagagagaaaaaagaggttgtca 4896428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23837068 - 23836989
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||| ||| |||||||||||||||||  || |||   |||||| ||||||||| ||||| ||||||||||||||    
T  23837068 ttgtttttgactaattaaaagagagaaaaagaaaattatcaaataagttg-taccaaatgattgtttaaatatcattgctc 23836989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24088508 - 24088432
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||| |||||||||   |||||||||| ||||||||||||    |||||| ||||||||||||| |||||||||||    
T  24088508 ttgttgttgaccaatacgaagagagaaagagaaggttgtcacaagagttgtcaccaaatggttgtaaaaatatcatt 24088432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 27001377 - 27001297
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||    
T  27001377 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 27001297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43983000 - 43983080
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||| ||||||||| ||  || ||||| |  |||||||  | ||||||||||| ||||||||||||||    
T  43983000 ttgtttttgaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggttgttcaaatatcattgctc 43983080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47106014 - 47106094
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||    
T  47106014 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 47106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15515887 - 15515938
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgtt 52  Q
    ||||||||||||||| ||||| |||||||| |||||||||||  ||||||||    
T  15515887 ttgtttttgaccaataaaaagtgagaaaaacaaggttgtcatcaaagttgtt 15515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29577404 - 29577365
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtc 40  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  29577404 ttgtttttgaccaatgaaaagagagaacaacaaggttgtc 29577365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 38889000 - 38889059
Alignment:
Q  22 agagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||| |||| || |||||||||||||||||| |||||  ||||| ||||||||||||||    
T  38889000 agagagaaaggagattgtcattgaagttgttaacaaataattgttcaaatatcattgctc 38889059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 5234439 - 5234366
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||||||||||| |||||||||||||| ||  ||||||   |||||| || |||||||||||| ||||||||    
T  5234439 ttgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttg-tatcaaatggttgttcaaatatca 5234366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 18442185 - 18442147
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  18442185 tggtgattcagaattctatgctattgtttctagtattat 18442147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20956550 - 20956508
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcatt 43  Q
    ||||||||||||||| |||||||||||||| || |||||||||    
T  20956550 ttgtttttgaccaatcaaaagagagaaaaacaaagttgtcatt 20956508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 23094485 - 23094557
Alignment:
Q  7 ttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||| | || ||||||||||||||||| |||  || |||| |||||||||||||| ||||||||||||||    
T  23094485 ttgaccaataacaaaagagaaaaagaaggttgccatcaaa-ttgt-accaaatggttgttcaaatatcattgctc 23094557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24209755 - 24209717
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgt 39  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  24209755 ttgtttttgaccaatgaaatgagagaaaaggaaggttgt 24209717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31275249 - 31275322
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||||||||||||||||||||||||||  |  ||||||   |||||| || |||||||||||| ||||||||    
T  31275249 ttgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttg-tatcaaatggttgttcaaatatca 31275322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 37245890 - 37245852
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  37245890 tggtgattcagaattctatgctattgtttctagtattat 37245852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 51259567 - 51259529
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  51259567 tggtgattcagaattttatgttattgtttctagtattat 51259529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 55735158 - 55735196
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  55735158 tggtgattcagaattctatgctattgtttctagtattat 55735196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8026732 - 8026651
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| | |||||||||||| || ||||||| | ||||||| |   ||||| |||  |||||||||||||||    
T  8026732 ttgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 8026651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 9162169 - 9162198
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  9162169 ttgtttttgaccaatgaaaagagagaaaaa 9162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39449273 - 39449314
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcat 42  Q
    ||||||||||||||| ||||||||||||||||  ||||||||    
T  39449273 ttgtttttgaccaataaaaagagagaaaaagagagttgtcat 39449314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 46912001 - 46912030
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  46912001 ttgtttttgaccaatgaaaagagagaaaaa 46912030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 51389419 - 51389499
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||| || ||||||||||||||||||  | |||||||   |||||| || |||||||||||| |||||||| ||||||    
T  51389419 ttgttttttactaatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatggttgttcaaatatcactgctct 51389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 52636345 - 52636418
Alignment:
Q  1 ttgtttttgaccaatgaaaagagag-aaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatat 73  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||   || |||||| |||||| ||||| ||||||    
T  52636345 ttgtttttgaccaatgacaagagagaaaaaacaaggttgtcacaaaatttgttatcaaatgattgttcaaatat 52636418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 14593263 - 14593195
Alignment:
Q  13 aatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||| |||||||||  |  |||||||  ||||||||| ||||| |||||| ||||||||||||||    
T  14593263 aatgaaaatagagaaaaaagaaattgtcatcaaagttgttagcaaattgttgttcaaatatcattgctc 14593195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22071601 - 22071664
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgt 65  Q
    |||||||| |||||| | ||||||||||||||| |||||||   |||||| ||||||||||||||    
T  22071601 ttgtttttaaccaataagaagagagaaaaagaaagttgtcaaacaagttg-taccaaatggttgt 22071664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25241845 - 25241805
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||| ||| |||||||||||||||||| ||||||    
T  25241845 ttgtttttgacaaataaaaagagagaaaaagaagattgtca 25241805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 32621730 - 32621758
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  32621730 ttgtttttgaccaatgaaaagagagaaaa 32621758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32901432 - 32901472
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| |||||||||||||| ||| ||||||    
T  32901432 ttgtttttgaccaataaaaagagagaaaaacaagattgtca 32901472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 40693496 - 40693413
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||||||| || ||||||||| |||||||||||||||||    
T  40693496 ttgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttgttcaaatatcattgctcttt 40693413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4678166 - 4678247
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||||||||||| |||||||||| ||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  4678166 ttgtttttgaccaatgaaaatagagaaaaaggaggttgtcatcaaagttgttagcaaatggttgtttaaatatcattgctct 4678247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21588895 - 21588816
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||||||| || ||||||||| |||||||||||||    
T  21588895 ttgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttgttcaaatatcattgct 21588816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 37392146 - 37392228
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||| |||||||||||||||||||||  ||||||||||  ||||||||| |||||||||||| ||||||||||||||||    
T  37392146 ttgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctctt 37392228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46148269 - 46148349
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||||||||||||||||| ||| |||||||| ||  ||||||||| |||||||||||| ||||||||||||||    
T  46148269 ttgtttttgaccaatgaaaagagagagaaataaggttgttatgaaagttgttaacaaatggttgttcaaatatcattgctc 46148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28110058 - 28110143
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgt 86  Q
    |||||||||||||||||||||||||| |||  |||| |||||  ||||||||| |||||||||||| ||||||||||||| |||||    
T  28110058 ttgtttttgaccaatgaaaagagagagaaatgaggtcgtcataaaagttgttagcaaatggttgttcaaatatcattgctttttgt 28110143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40077358 - 40077435
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||||||||||||| | |||| |||||||| ||||||||||  ||||||||| |||||||||||| |||||||||||    
T  40077358 ttgtttttgaccaataagaagaaagaaaaaggaggttgtcataaaagttgttaacaaatggttgttcaaatatcattg 40077435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18157153 - 18157074
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| |||||||| |||||| ||||||||||||||    
T  18157153 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taccaaatagttgttcaaatatcattgctc 18157074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25940635 - 25940553
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||| |||||||||||   |  ||| |||||||| |||||| |||||||||||||||||    
T  25940635 ttgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaatagattg-taccaaatagttgttcaaatatcattgctcttt 25940553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 42467311 - 42467385
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||| |||||| | ||||||||||||  ||||||||||||||||| ||| |||||||||||| |||||||||||    
T  42467311 ttttttaccaataagaagagagaaaaaagaggttgtcattgaagttattagcaaatggttgttcaaatatcattg 42467385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 2469798 - 2469877
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||| ||||||||||| |||||||| |||||||||||   | ||||| |||||||||||||| |||||||||||||||||    
T  2469798 ttttttaccaatgaaaatagagaaaaggaaggttgtcaaataggttgt-accaaatggttgttcaaatatcattgctcttt 2469877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43079600 - 43079515
Alignment:
Q  1 ttgtttttgaccaatga---aaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||||||||   ||||||||||||  ||||||||||   ||||| |||||||||||||||| |||||||||||||||||    
T  43079600 ttgtttttgaccaatgatgaaaagagagaaaagaaaggttgtcaaataagtt-ttaccaaatggttgttcaaatatcattgctcttt 43079515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 9031313 - 9031390
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||| ||||||||||||| |||||||||||   |  ||| ||||||||||||||| |||||||||||||||    
T  9031313 tttttgaccaataaaaagagagaaaatgaaggttgtcaaatagattg-taccaaatggttgttcaaatatcattgctct 9031390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43107715 - 43107792
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgc 79  Q
    |||||||||||||||||||||| |||||| ||||||||| |   | |||| ||||||||||||||| ||||||||||||    
T  43107715 ttgtttttgaccaatgaaaagaaagaaaaggaaggttgttaaataggttg-taccaaatggttgttcaaatatcattgc 43107792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6655585 - 6655505
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||| ||||||||||||||| ||||||||| ||||||   ||| |  ||||||||||||||| |||||||||||||||    
T  6655585 ttgtttttaaccaatgaaaagagataaaaagaagattgtca-aaaagattgtaccaaatggttgtttaaatatcattgctct 6655505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10591116 - 10591027
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgtttaa 90  Q
    |||||||||| |||| | || |||||||| |  |||||||||  ||||||| ||||||| |||||| ||||||||||||||||| |||||    
T  10591116 ttgtttttgatcaataagaatagagaaaaggtgggttgtcataaaagttgtcaccaaatagttgttcaaatatcattgctctttttttaa 10591027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 10619646 - 10619589
Alignment:
Q  22 agagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgc 79  Q
    |||||||||| ||||||||||  ||||||||| |||||||||||| ||||||||||||    
T  10619646 agagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgc 10619589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27688740 - 27688780
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  27688740 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtca 27688780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29034188 - 29034228
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  29034188 ttgtttttgaccaatgaaaagagagaaaaagaagattgtca 29034228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33056719 - 33056799
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| |||| | || ||||  ||||||||||| || || ||| |||||||||||| ||||||||||||||    
T  33056719 ttgtttttgaccaataaaaaaacagtaaaatgaggttgtcattaaaattattagcaaatggttgttcaaatatcattgctc 33056799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 4971394 - 4971472
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||| ||| || |||||| | |||||| |||  ||||||||| |||||||||||| ||||||||||||||||    
T  4971394 tttttgaccaataaaatgaaagaaaagggaggttg-cataaaagttgttagcaaatggttgttcaaatatcattgctctt 4971472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12141987 - 12142060
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    |||||||||||||||||||||| ||||||| || |||||||   |||||| || |||||||||||| ||||||||    
T  12141987 ttgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttg-tatcaaatggttgttcaaatatca 12142060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44187794 - 44187876
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||||||||||| | |||| || || ||||||||  |||||||||  |||| |||||| |||||| |||||||||    
T  44187794 ttgtttttgaccaatgaaaaaaaagaacaataaagttgtcatgaaagttgttagtaaatagttgttcaaatattattgctctt 44187876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 34304645 - 34304596
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgtta 53  Q
    |||||||||||||||||||||||||||  |||||||||| || |||||||    
T  34304645 tttttgaccaatgaaaagagagaaaaaagaggttgtcatagatgttgtta 34304596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 35072210 - 35072122
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgtttaatta 93  Q
    ||||| |||||||| ||||||||||| |||| ||||||   | ||||| ||||||| |||||| ||||||||||||||||  ||||||||    
T  35072210 ttttttaccaatgagaagagagaaaatgaagattgtcaaaaaggttgt-accaaatagttgttcaaatatcattgctcttcttttaatta 35072122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12232971 - 12232931
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  12232971 ttgtttttgaccaataaatagagagaaaaagaaggttgtca 12232931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25332467 - 25332384
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttg 85  Q
    |||||||| |||||| |||||   |||||||||| || ||| | ||||||||| |||||||||||| |||||| |||||||||||    
T  25332467 ttgtttttaaccaataaaaaggaggaaaaagaag-ttatcaataaagttgttagcaaatggttgttcaaatattattgctctttg 25332384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26041413 - 26041493
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||||||| || ||||||| | ||||||| |  |||||| |||  ||||||||||||||    
T  26041413 ttgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatggatgtacaaatatcattgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30941280 - 30941359
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||| ||||||||||| |||||||| |||||||||||   | |||| ||| ||||||||||| |||||| |||||||    
T  30941280 ttgtttttaaccaatgaaaaaagagaaaaggaaggttgtcaaataggttg-tactaaatggttgttcaaatatgattgctc 30941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33050286 - 33050366
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||| ||| |||||||||| | ||||||| |  |||||| |||  ||||||||||||||    
T  33050286 ttgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 33050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44564691 - 44564612
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||| |||||| |||||   |||||||| |||||||| | ||||||||| |||||| ||||| ||||||||||||||    
T  44564691 ttgtttttaaccaataaaaaggaggaaaaaga-ggttgtcaataaagttgttagcaaatgattgttcaaatatcattgctc 44564612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 47905081 - 47905011
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaaga--aggttgtcattgaagttgttaccaaatggttgttaaaatat 73  Q
    ||||| ||||||||||||||||||||| |  |||||||||| |||||||||| ||||| |||||| ||||||    
T  47905081 ttttttaccaatgaaaagagagaaaaaaatgaggttgtcatagaagttgttagcaaat-gttgttcaaatat 47905011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 30201365 - 30201412
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    |||||||||||| |||||||||||||| ||| |||||||| |||||||    
T  30201365 tttttgaccaataaaaagagagaaaaataagattgtcattaaagttgt 30201412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 35098555 - 35098473
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||| |||||||| ||||||||||| |||| ||||||   | |||| |||||||| |||||| || ||||||||||||||    
T  35098555 ttgttttttaccaatgagaagagagaaaatgaagattgtcaaaaaggttg-taccaaatagttgttcaattatcattgctcttt 35098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8061713 - 8061633
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| | |||||| |||| |||| || ||||  ||||||| |||||||||||||| |||||| |||||||||    
T  8061713 ttgtttttgaccaataagaagagataaaa-gaagattatcatgaaagttgt-accaaatggttgttcaaatattattgctctt 8061633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 20406647 - 20406725
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||| |||||||| ||||| || ||||||   ||||||||||  |||||| |||  |||||||||||||||    
T  20406647 tttttgaccaataaaaagagaaaaaaacaaagttgtcgccgaagttgttattaaatggatgtccaaatatcattgctct 20406725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 29200993 - 29200955
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  29200993 tggtgattcagaattctatgctattgtttctagtattat 29200955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 30824532 - 30824494
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  30824532 tggtgattcagaattctatgttattgtttctagtcttat 30824494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31329322 - 31329240
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||| |||||| |||  |||||||||  || |||||||  |||||||||  ||||||||||| |||||| |||||||||    
T  31329322 ttgtttttaaccaataaaattagagaaaaatgagattgtcataaaagttgttagtaaatggttgttcaaatattattgctctt 31329240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 38547255 - 38547177
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||| ||||| |||||||||||| ||| || |||| |||||| ||| || |||||| || |||||||||| ||||    
T  38547255 tttttgactaatgagaagagagaaaaaaaagattatcatagaagttattagcacatggttattcaaatatcattactct 38547177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42431826 - 42431876
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| | |||||||||||| |||||||||| | |||||||    
T  42431826 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 42431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 16098639 - 16098676
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtatta 258  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  16098639 tggtgattcagaattctatgatattgtttctagtatta 16098676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 21752761 - 21752790
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  21752761 ttgtttttgaccaatgaaaagagagaaaaa 21752790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37856149 - 37856120
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  37856149 ttgtttttgaccaatgaaaagagagaaaaa 37856120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38990204 - 38990245
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcat 42  Q
    ||||||||||||||| |||| ||||||||| |||||||||||    
T  38990204 ttgtttttgaccaataaaaatagagaaaaacaaggttgtcat 38990245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 39875777 - 39875748
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  39875777 ttgtttttgaccaatgaaaagagagaaaaa 39875748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 41077472 - 41077443
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  41077472 ttgtttttgaccaatgaaaagagagaaaaa 41077443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 42204694 - 42204665
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  42204694 ttgtttttgaccaatgaaaagagagaaaaa 42204665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43444731 - 43444795
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgtt 66  Q
    |||||||| |||||||||||| ||||||| |||||||||||   | |||| |||||||||||||||    
T  43444731 ttgttttttaccaatgaaaagggagaaaatgaaggttgtcaaataggttg-taccaaatggttgtt 43444795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 45154477 - 45154432
Alignment:
Q  33 aggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||||||| | ||||||||| |||||||||||| |||||||||||    
T  45154477 aggttgtcaataaagttgttagcaaatggttgttcaaatatcattg 45154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 116734 - 116814
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||| ||| |||||| ||||||| ||| |||||| | ||||||| |  |||||| |||  ||||||||||||||    
T  116734 ttgtttttgacgaataaaaagaaagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 5978682 - 5978710
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  5978682 ttgtttttgaccaatgaaaagagagaaaa 5978710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30864385 - 30864305
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | || ||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||    
T  30864385 ttgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 30864305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32315929 - 32316005
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||| | |||||||||||| || |||||||   |||||||   ||||| |||||| ||||||||||    
T  32315929 ttgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcatt 32316005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 84
Target Start/End: Original strand, 34978455 - 34978483
Alignment:
Q  56 aaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||||||||||||||||||||    
T  34978455 aaatggttgttaaaatatcattgctcttt 34978483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42118665 - 42118625
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| | ||||||||| |||||||||||||    
T  42118665 ttgtttttgaccaataagaagagagaagaagaaggttgtca 42118625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 46651775 - 46651803
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  46651775 ttgtttttgaccaatgaaaagagagaaaa 46651803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48866898 - 48866858
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||| ||||||||||||||||||  |||||||||    
T  48866898 ttgtttttgactaatgaaaagagagaaaaaagaggttgtca 48866858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 49014367 - 49014291
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||| |||| ||||||||||| | ||||| |  ||||||| || |||||||||   ||||||||||    
T  49014367 ttgtttttgaccaataaaaatagagaaaaagatgtttgtcctaaaagttgtcacaaaatggttgcataaatatcatt 49014291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14548793 - 14548711
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||| |||||||| ||||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  14548793 ttgttttttaccaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaatagttgttaaaatatcattgctctt 14548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29108088 - 29108168
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| |||| ||| |||||||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  29108088 ttgtttttgaccaataaaaaaagaaaaaaagaaggttgtcattaaagttgttagtaaatggttgttaaaatatcattgctc 29108168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 38174217 - 38174135
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||||||||  ||||||| |||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  38174217 ttgtttttgaccaatgaggagagagagaaaggaggttgtcatagaagttgttagcaaatggttgttcaaatatcattgctctt 38174135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9000982 - 9000901
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||||||||||||| ||||  |||||| |||| ||||||||| |||||||||||| |||||||||||||||    
T  9000982 ttgtttttgaccaatgaaaagagagtaaaatgaggttgacattaaagttgttagcaaatggttgttcaaatatcattgctct 9000901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6849229 - 6849147
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| |||| |||||||||||| ||||||||  |||||||||  |||||| |||| ||||||||||||||||    
T  6849229 ttgtttttgaccaataaaaaaagagaaaaagaaagttgtcataaaagttgttagaaaatggctgttcaaatatcattgctctt 6849147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6005047 - 6005127
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||||||||||||||||| ||| |||||||   |||||| ||||||||||||||| ||| |||||||||||    
T  6005047 ttgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataagttg-taccaaatggttgttcaaacatcattgctct 6005127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1796586 - 1796665
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| || |||||||||||| ||||||||||||||    
T  1796586 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taacaaatggttgttcaaatatcattgctc 1796665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30578357 - 30578437
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||| ||||||||||||| ||||||||||  ||||||| | |||||  ||||| ||||||||||||||    
T  30578357 ttgtttttgaccaatgataagagagaaaaaggaggttgtcatcaaagttgtcagcaaataattgttcaaatatcattgctc 30578437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 9895112 - 9895185
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||| |||||||||||||||||||| | ||||| ||||  ||||||||| |||||||||||| ||||||||||    
T  9895112 tttttaaccaatgaaaagagagaaaagggaggttatcatgaaagttgttagcaaatggttgttcaaatatcatt 9895185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 36524716 - 36524640
Alignment:
Q  5 ttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||| |||||| ||||||||||||  ||| ||||||  ||||||||| |||||||||||| ||||||||||||||    
T  36524716 ttttgatcaatgagaagagagaaaaatgaggctgtcataaaagttgttagcaaatggttgttcaaatatcattgctc 36524640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 12045621 - 12045539
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||| |||||| || |||||||||||||   | ||| | |||||||||||||| |||||||||||||||||    
T  12045621 ttgtttttgaccaatgagaagagacaagaagaaggttgtcaaaaaggttat-accaaatggttgttcaaatatcattgctcttt 12045539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 42443209 - 42443291
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||| ||| ||||| |||||||||||||   || ||| |||||||| |||||| |||||||||||||||||    
T  42443209 ttgtttttgaccaatgagaagggagaagaagaaggttgtcaaaaaatttg-taccaaatagttgttcaaatatcattgctcttt 42443291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5782891 - 5782967
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    |||||||||| |||||||||||||||||| ||| |||||||   | |||| ||||||||||||||| |||||||||||    
T  5782891 ttgtttttgatcaatgaaaagagagaaaatgaaagttgtcaaataggttg-taccaaatggttgttcaaatatcattg 5782967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30927899 - 30927819
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |  |||||| |||  ||||||||||||||    
T  30927899 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32725750 - 32725710
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  32725750 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtca 32725710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 36740415 - 36740494
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||| |||||||||||||||||| |||||||||||   |  ||| || |||||||||||| ||||||||||||||    
T  36740415 ttgtttttgatcaatgaaaagagagaaaatgaaggttgtcaaatagattg-tatcaaatggttgttcaaatatcattgctc 36740494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38844759 - 38844679
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||| |||  ||||||||||  || |||||| |||||||||||| ||||||||| ||||    
T  38844759 ttgtttttgaccaataagaagagagagaaaagaggttgtcataaaaattgttaacaaatggttgttcaaatatcatggctc 38844679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 20284828 - 20284886
Alignment:
Q  19 aagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    |||||||||||||||||||||||   ||||||| | |||||||||||| ||||||||||    
T  20284828 aagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatcatt 20284886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 21071457 - 21071515
Alignment:
Q  19 aagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    |||||||||||||||||||||||   ||||||| | |||||||||||| ||||||||||    
T  21071457 aagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatcatt 21071515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43605637 - 43605555
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||| | ||||||||||| | |||||||||   ||||||| || ||| ||||||| |||||||||| |||||    
T  43605637 ttgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactctt 43605555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 37392093 - 37392016
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||| |||||| ||||||||| |||| ||| ||||||   || |||||| |||||||||||| ||||||||||||||    
T  37392093 tttttaaccaataaaaagagaggaaaaaaagtttgtcaaaaaaattgttaacaaatggttgttcaaatatcattgctc 37392016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 41273618 - 41273710
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgtttaattag 94  Q
    ||||||||||||||| | |||||||||||| |||||||| | | ||||||| |   ||||| |||  ||||||||||||||||| |||||||||    
T  41273618 ttgtttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatggatgtacaaatatcattgctcttt-tttaattag 41273710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3206431 - 3206355
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||| ||||||||||||||| | |||||||   || || | | |||||||||||| ||||||||||    
T  3206431 ttgtttttgaccaattaaaagagagaaaaagtatgttgtcacaaaaattatcatcaaatggttgttcaaatatcatt 3206355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20995026 - 20994950
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||| | ||||||||||| | |||||||||   ||||||| |||| | ||||||| ||||||||||    
T  20995026 ttgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcaccagaaggttgttcaaatatcatt 20994950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37524396 - 37524356
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  37524396 ttgtttttgaccaatgaaaagagagaaaaaagaggttgtca 37524356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9046256 - 9046334
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    |||||| |||||||| | ||| ||||||||||||||||| ||  |||||||| |||||| ||||||  ||||||||||||    
T  9046256 ttgtttctgaccaataagaagggagaaaaagaaggttgttatgaaagttgtt-ccaaatagttgttccaatatcattgct 9046334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 10344434 - 10344489
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaat 59  Q
    |||||||||||| |||||| ||||||| |||||||||||  ||||||||| |||||    
T  10344434 tttttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttatcaaat 10344489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23258135 - 23258217
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||||  | |||||||   || |||||  |||||||||||| |||||||| | ||||||    
T  23258135 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtt-tcaaatggttgttcaaatatcactactcttt 23258217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34247877 - 34247916
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtc 40  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  34247877 ttgtttttgaccaatgaaaagagagaacaacaaggttgtc 34247916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 185629 - 185591
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtattat 259  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  185629 tggtgattcagaattctatgctattgtttctagtattat 185591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24503020 - 24503070
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||||||||||||||||||  | ||||||||  |||||||    
T  24503020 ttgtttttgaccaatgaaaagagagaaaaatgaagttgtcataaaagttgt 24503070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 34
Target Start/End: Complemental strand, 31665955 - 31665925
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaag 34  Q
    |||||||||||||||||||||||||||||||    
T  31665955 tttttgaccaatgaaaagagagaaaaagaag 31665925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37562109 - 37562059
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| | |||||||||||| |||||||||||  |||||||    
T  37562109 ttgtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgt 37562059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40413331 - 40413258
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||||||| ||||||||||||||||||  | ||| ||||  |||||| || |||||||||||| ||||||||    
T  40413331 ttgtttttgactaatgaaaagagagaaaaaagaagttatcataaaagttg-tatcaaatggttgttcaaatatca 40413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 426204 - 426233
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  426204 ttgtttttgaccaatgaaaagagagaaaaa 426233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 896010 - 896039
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  896010 ttgtttttgaccaatgaaaagagagaaaaa 896039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 5924916 - 5924973
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatgg 61  Q
    |||||||||||| | |||||||||||| |||||||||||  ||||||| | |||||||    
T  5924916 tttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatgg 5924973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 22767233 - 22767262
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  22767233 ttgtttttgaccaatgaaaagagagaaaaa 22767262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 23854081 - 23854118
Alignment:
Q  221 tggtgattcagaattctatgttattatttctagtatta 258  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  23854081 tggtgattcagaattctatgctattgtttctagtatta 23854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33817260 - 33817337
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||||||||||||| |||||||||||||| ||| |||||| | || ||||||  |||| | |||  |||||||||||    
T  33817260 ttgtttttgaccaataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatcattg 33817337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 33854784 - 33854726
Alignment:
Q  19 aagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||||||||  |||||||    | ||||||||| ||||||||||||||    
T  33854784 aagagagaaaaagaaggttgtcatgaaagttgt----atatggttgttcaaatatcattgctc 33854726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 35937477 - 35937440
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||| | |||||||||||||||||||||||    
T  35937477 tttttgaccaataagaagagagaaaaagaaggttgtca 35937440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 102424 - 102348
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    |||||||||||| |||| ||| ||| |||||||||||| | |  ||||||| || ||||||||||  ||||||||||    
T  102424 ttgtttttgacctatgagaagcgaggaaaagaaggttggcctaaaagttgtaacaaaatggttgtacaaatatcatt 102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 154393 - 154433
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| ||||||||||||| ||| |||||||    
T  154393 ttgtttttgaccaataaaaagagagaaaatgaaagttgtca 154433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2597128 - 2597088
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| | |||||||||||| ||||||||||    
T  2597128 ttgtttttgaccaataagaagagagaaaaacaaggttgtca 2597088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 27631050 - 27631078
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  27631050 ttgtttttgaccaatgaaaagagagaaaa 27631078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43602391 - 43602311
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| |||||||||| ||| || |||||||   ||||||| |  |||||| |||  ||||||||||||||    
T  43602391 ttgtttttgaccaatcaaaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 43602311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 49457668 - 49457753
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgt 86  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||| ||| |||||| ||||| |||||||||||||||||||    
T  49457668 ttgtttttgaccaatgaaaagagagaaaaatgaggttgtcatagaagttattagcaaatgtttgttcaaatatcattgctctttgt 49457753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 50294092 - 50294011
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||| |||||||||||||||||||||| |||||||   |||||| ||||||||||||||||||||||||||||||||    
T  50294092 ttgtttttgatcaatgaaaagagagaaaaagaaagttgtcaaataagttg-taccaaatggttgttaaaatatcattgctctt 50294011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36869805 - 36869724
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||||||||||||||||| |||  ||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  36869805 ttgtttttgaccaatgaaaagagagagaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctct 36869724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40785667 - 40785586
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||||||||||| |||||||||| ||||||||||  |||| |||| |||||||||||| |||||||||||||||    
T  40785667 ttgtttttgaccaatgaaaatagagaaaaaggaggttgtcatcaaagtcgttagcaaatggttgttcaaatatcattgctct 40785586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47276388 - 47276468
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||| ||||||||||||| |||||||||| |||||||||| || ||| ||||| ||||||||||||||    
T  47276388 ttgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatgattgttcaaatatcattgctc 47276468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27198122 - 27198040
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||| |||||||||||||||||||||  ||||||||||  ||||||||| |||||| ||||| ||||||||||||||||    
T  27198122 ttgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctctt 27198040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36799501 - 36799584
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||||  | ||||||||  || |||||| |||||| ||||| |||||||||||||||||    
T  36799501 ttgtttttgaccaatgaaaagagagaaaaatgaagttgtcatgaaacttgttagcaaatgtttgttcaaatatcattgctcttt 36799584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1901894 - 1901814
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| ||||||||||||||| |||||| ||||||||    
T  1901894 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taccaaatggttgttcaaatattattgctct 1901814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1911340 - 1911260
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||||||||||||||||| |||||||||||   | |||| ||||||||||||||| |||||| ||||||||    
T  1911340 ttgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttg-taccaaatggttgttcaaatattattgctct 1911260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42102340 - 42102421
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| |||| | |||||||  ||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  42102340 ttgtttttgaccaataaaaaaaaagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctct 42102421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 45528909 - 45528836
Alignment:
Q  5 ttttgaccaatgaaaagagagaaaaa-gaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||| |||||||||||| | |||||||||| |||||||||| |||||||||||| ||||||||||    
T  45528909 ttttgaccaatgagaagagagaaaaaaggaggttgtcatagaagttgttagcaaatggttgttcaaatatcatt 45528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1295435 - 1295516
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt--taccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||||||||||||| ||||||||||||||||||   || ||||  || |||||||||||| ||||||||||||||||    
T  1295435 ttgtttttgaccaatgaaaagatagaaaaagaaggttgtca---aaattgttgtagcaaatggttgttcaaatatcattgctctt 1295516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25959510 - 25959428
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||| ||| |||||||   | |||| || |||||||||||| |||||||||||||||||    
T  25959510 ttgtttttgaccaatgaaaagagagaaaatgaaagttgtcaaataggttg-tatcaaatggttgttcaaatatcattgctcttt 25959428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 35987347 - 35987426
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||||| |||||| |||||||||||||||||||  || |||| | |||||| ||||| ||||||||||||||||    
T  35987347 tttttgaccaataaaaagatagaaaaagaaggttgtcataaaaattgtaagcaaatgattgttcaaatatcattgctctt 35987426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44593069 - 44593151
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||||||||||| |||||||| |||||||||||   |||||| ||||||||| || || |||||||||||||||||    
T  44593069 ttgtttttgaccaatgaaaatagagaaaatgaaggttgtcaaaaaagttg-taccaaatgattattcaaatatcattgctcttt 44593151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7867677 - 7867596
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||| |||||||||||||||||||| |||||||||||   |  ||| ||||||||||||||| ||||||||||||||||    
T  7867677 ttgttttttaccaatgaaaagagagaaaatgaaggttgtcaaatagattg-taccaaatggttgttcaaatatcattgctctt 7867596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 46473231 - 46473312
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||||||||||||||||||||||  | ||||||||  |||||| || |||||||||||| |||||||||| |||||    
T  46473231 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttg-tatcaaatggttgttcaaatatcattactctt 46473312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31326811 - 31326891
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||||||||||||||||| |||| ||||||   |  ||| ||||||||||||||| |||||||||||||||    
T  31326811 ttgtttttgaccaatgaaaagagagaaaatgaagattgtcaaatagattg-taccaaatggttgttcaaatatcattgctct 31326891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32795939 - 32796019
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| ||||||||||||| ||| |||||||   | |||| ||||||||||||||| |||||||||||||||    
T  32795939 ttgtttttgaccaataaaaagagagaaaatgaaagttgtcaaataggttg-taccaaatggttgttcaaatatcattgctct 32796019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34628043 - 34627954
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttgtttaa 90  Q
    ||||||||||||||||||||||||||||||   | |||||||  |||||||||  |||| |||||| |||||||||||| |||| |||||    
T  34628043 ttgtttttgaccaatgaaaagagagaaaaatgtgattgtcatgaaagttgttaataaatagttgttcaaatatcattgccctttctttaa 34627954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35376519 - 35376442
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||||||||||||| |||||||||| |||  ||||||||||  ||||||||| ||||||||| || |||||||||||    
T  35376519 ttgtttttgaccaataaaaagagagagaaatgaggttgtcataaaagttgttaacaaatggttcttcaaatatcattg 35376442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 53715422 - 53715494
Alignment:
Q  5 ttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||| ||||| ||||||||||||| ||||||||||  ||||||||| ||||| |||||| ||||||||||    
T  53715422 ttttgactaatgagaagagagaaaaaggaggttgtcataaaagttgttatcaaatagttgttcaaatatcatt 53715494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 50280055 - 50279972
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||| ||| | |||||||||||| |||||||||||| ||||||| |  |||||| |||  |||||||||||||||||    
T  50280055 ttgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatatcattgctcttt 50279972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32981089 - 32981008
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    ||||||||||| ||||| ||| ||||| |||||||||||||   || |||| |||||||||||||| ||||||||||||||||    
T  32981089 ttgtttttgacaaatgagaagggagaagaagaaggttgtcaaaaaatttgt-accaaatggttgttcaaatatcattgctctt 32981008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44127160 - 44127086
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    |||||||| |||||||| ||||||||||||  ||||||||||  ||||||||| ||||| |||||| ||||||||    
T  44127160 ttgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatagttgttcaaatatca 44127086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 22153970 - 22154050
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttg 85  Q
    |||| ||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||  |||||||| | |||||||    
T  22153970 ttttggaccaatgaaaagagagcaaatgaaagttgtcattaaagttg-taccaaatggttgtacaaatatcactactctttg 22154050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 981576 - 981651
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    |||||||||||||||||||||||||| |||||||||||   | | || ||| ||||||||||| |||||||||||||    
T  981576 tttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggctg-tactaaatggttgttcaaatatcattgct 981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37035719 - 37035799
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||| |||||| ||||||||| |||| || |||||||   ||||||||| ||||| |||||| ||||||||||||||    
T  37035719 ttgtttttaaccaataaaaagagaggaaaaaaaagttgtcaagaaagttgttagcaaatagttgttcaaatatcattgctc 37035799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41717366 - 41717406
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  41717366 ttgtttttgaccaatgaaaagagagaaaaagaagattgtca 41717406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 462369 - 462291
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgct 80  Q
    |||||||| | ||||||||||||||||||  ||||||||||   | ||||| |||||||||||||| |||||||||||||    
T  462369 ttgttttttatcaatgaaaagagagaaaagaaaggttgtcaaataggttgt-accaaatggttgttcaaatatcattgct 462291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11173553 - 11173635
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||||||||  | |||||||   |||||| || |||||||||||| |||||| ||| ||||||    
T  11173553 ttgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg-tatcaaatggttgttcaaatattattactcttt 11173635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11327211 - 11327294
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||| | |||||||| ||| |||||||||| | ||||||| |  |||||| |||  |||||||||||||||||    
T  11327211 ttgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctcttt 11327294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8868975 - 8869052
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||| ||||||||   ||||||||| ||||||||||  ||||| ||  |||||||||||| ||||||||||||||    
T  8868975 ttgtttttgaacaatgaaa---gagaaaaaggaggttgtcataaaagttattggcaaatggttgttcaaatatcattgctc 8869052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 53870673 - 53870751
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgc 79  Q
    |||||||| | |||||| ||||||||||||| ||||||||||  ||||||||| |||||| ||||  |||||| |||||    
T  53870673 ttgttttttatcaatgataagagagaaaaaggaggttgtcatcaaagttgttagcaaatgattgtgcaaatattattgc 53870751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13159764 - 13159845
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  |||||||||||||||    
T  13159764 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 13159845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26022027 - 26021962
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgtt 66  Q
    ||||||||||||||| ||||||| |||||||||||||||||   |||||||   ||||||||||||    
T  26022027 ttgtttttgaccaataaaaagagtgaaaaagaaggttgtcacaaaagttgtcctcaaatggttgtt 26021962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32931886 - 32931809
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattg 78  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||||   |||||| |||  |||||||||||    
T  32931886 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatcattg 32931809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7182 - 7142
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  7182 ttgtttttgaccaataaaaaaagagaaaaagaaggttgtca 7142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1031395 - 1031316
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||| ||||||| || ||||||||  |||||| ||||||||  ||||| ||||||||||||||    
T  1031395 ttgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttg-taccaaataattgttcaaatatcattgctc 1031316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20216051 - 20216131
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||||||| ||  |||||||||||||  |||||||||   || ||||||  ||||||||||| ||||||||||||||    
T  20216051 ttgtttttgaccgatagaaagagagaaaaatgaggttgtcacaaaaattgttagtaaatggttgttcaaatatcattgctc 20216131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34021431 - 34021347
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttg 85  Q
    ||||||||||||||| | |||||||||||| || ||||||| | ||||||| |   ||||| |||  ||||||||||||||||||    
T  34021431 ttgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctttg 34021347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43409333 - 43409293
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  43409333 ttgtttttgaccaatgaaaagagagaaaaaaaagattgtca 43409293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 47683894 - 47683974
Alignment:
Q  2 tgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||||||||| | |||||||||| |||||||||||    ||||||| || ||||||||||  |||||||||| ||||    
T  47683894 tgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactct 47683974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7231974 - 7231901
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    ||||||||||||||||||||||||||||||  |  ||||||   |||||| || |||||||||||| ||||||||    
T  7231974 ttgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttg-tatcaaatggttgttcaaatatca 7231901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 34
Target Start/End: Complemental strand, 29800514 - 29800484
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaag 34  Q
    |||||||||||||||||||||||||||||||    
T  29800514 tttttgaccaatgaaaagagagaaaaagaag 29800484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36819059 - 36819109
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||||||||||| | |||||||||||| |||||||||| | |||||||    
T  36819059 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36819109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 8066458 - 8066487
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  8066458 ttgtttttgaccaatgaaaagagagaaaaa 8066487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12762911 - 12762870
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcat 42  Q
    |||||||| |||||| ||||||||||||||||| ||||||||    
T  12762911 ttgttttttaccaataaaaagagagaaaaagaaagttgtcat 12762870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 33007463 - 33007492
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  33007463 ttgtttttgaccaatgaaaagagagaaaaa 33007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34607887 - 34607807
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    |||||||| | |||||||||||||||||| |||||||||||   |  ||| |||||||| |||||| ||||||| |||||||    
T  34607887 ttgttttttatcaatgaaaagagagaaaatgaaggttgtcaaatagattg-taccaaatagttgttcaaatatcgttgctct 34607807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37215199 - 37215170
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  37215199 ttgtttttgaccaatgaaaagagagaaaaa 37215170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 39604214 - 39604185
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  39604214 ttgtttttgaccaatgaaaagagagaaaaa 39604185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42755758 - 42755839
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||| ||| |||||| |||||||| ||||||||||  || || ||  |||||| || || |||||||||||||||    
T  42755758 ttgtttttgacaaataaaaagaaagaaaaaggaggttgtcataaaaattattcgcaaatgattattcaaatatcattgctct 42755839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 45150231 - 45150150
Alignment:
Q  4 tttttgaccaatgaaaagagaga-aaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    |||||||||||| |||||||||| | || || ||| ||||  ||||||||| |||||| ||||| |||||||||| ||||||    
T  45150231 tttttgaccaataaaaagagagagagaaaaaagttttcatgaaagttgttagcaaatgattgttcaaatatcatttctcttt 45150150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 47849773 - 47849802
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  47849773 ttgtttttgaccaatgaaaagagagaaaaa 47849802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 28300614 - 28300586
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  28300614 ttgtttttgaccaatgaaaagagagaaaa 28300586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29525334 - 29525410
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||| ||||||||||||| | ||||| |||   ||| ||| || ||| ||||||| ||||||||||    
T  29525334 ttgtttttgaccaataaaaagagagaaaaggtaggttatcacaaaagctgtcactaaaaggttgttcaaatatcatt 29525410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30633782 - 30633734
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagtt 49  Q
    ||||| ||||||||| | |||||||||||| |||||||||||| |||||    
T  30633782 ttgttcttgaccaataagaagagagaaaaataaggttgtcattaaagtt 30633734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32656078 - 32656118
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  32656078 ttgtttttgaccaatgaaaagaaagaaaaggaaggtcgtca 32656118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 35554083 - 35554055
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  35554083 ttgtttttgaccaatgaaaagagagaaaa 35554055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41877791 - 41877871
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| |||| ||||||||| || |||||||   ||||||| |  |||||| |||  ||||||||||||||    
T  41877791 ttgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgtcattaaatggatgtacaaatatcattgctc 41877871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 52454060 - 52453980
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| | |||||||| ||| || ||||||| | ||||||| |  |||||| |||  ||||||||||||||    
T  52454060 ttgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctc 52453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 54233469 - 54233429
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||| | |||||||||||| ||||||||||    
T  54233469 ttgtttttgaccaataagaagagagaaaaacaaggttgtca 54233429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16562 - 16483
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||| |||||||||||||| ||||||   |||||| ||||||||||||||| ||||||||||||||    
T  16562 ttgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttg-taccaaatggttgttgaaatatcattgctc 16483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 56282 - 56361
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||||||| |||||||||||||| ||||||   |||||| ||||||||||||||| ||||||||||||||    
T  56282 ttgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttg-taccaaatggttgttgaaatatcattgctc 56361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 34942 - 35020
Alignment:
Q  5 ttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctcttt 84  Q
    ||||||||||||||||||||||||| |||||||||||   | |||| ||||||||||||||| |||||||||||||||||    
T  34942 ttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttg-taccaaatggttgttcaaatatcattgctcttt 35020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 5335 - 5416
Alignment:
Q  4 tttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctttg 85  Q
    ||||| |||||||| ||||||||||| | ||| ||||||  ||||||||| |||||||||||| |||||||||| |||||||    
T  5335 tttttaaccaatgagaagagagaaaagggaggctgtcatgaaagttgttagcaaatggttgttcaaatatcattactctttg 5416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18258 - 18179
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||| ||||| |||||||| || | ||||||||||  ||||||| | |||||||||||| ||||||||||||||    
T  18258 ttgtttttgac-aatgagaagagagagaagggaggttgtcataaaagttgtaagcaaatggttgttcaaatatcattgctc 18179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17298 - 17218
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    ||||||||||||||| |||| |||||||||||||||| ||||  |||||||  | |||| |||||| |||||||| |||||    
T  17298 ttgtttttgaccaataaaaaaagagaaaaagaaggttatcatataagttgtcgctaaatagttgttcaaatatcactgctc 17218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 204415 - 204339
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcatt 77  Q
    ||||||||||||||| | ||||||||||||| || ||||||   ||||||| |||||| ||||||| ||||||||||    
T  204415 ttgtttttgaccaataagaagagagaaaaagtagattgtcacaaaagttgtcaccaaaaggttgtttaaatatcatt 204339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 147224 - 147143
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctct 82  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  |||||||||||||||    
T  147224 ttgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctct 147143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11295 - 11335
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  11295 ttgtttttgaccaatgaaaagagagaaaaaagaggttgtca 11335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29778 - 29728
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgt 51  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||  |||||||    
T  29778 ttgttttggaccaatgaaaagagagaaaatgaaagttgtcatcaaagttgt 29728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15156 - 15084
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    |||||||| ||||||||||| |||||||||||| |||||||   |||||| |||||||| |||||| ||||||||    
T  15156 ttgtttttaaccaatgaaaaaagagaaaaagaa-gttgtcacaaaagttg-taccaaatagttgttcaaatatca 15084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18107 - 18179
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatca 75  Q
    |||||||| ||||||||||||||||||||| || ||||||||  |||||| || ||||| |||||| ||||||||    
T  18107 ttgtttttaaccaatgaaaagagagaaaaa-aaagttgtcataaaagttg-tatcaaatagttgttcaaatatca 18179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 249110 - 249028
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctctt 83  Q
    |||||||||| |||| | |||||||||||| |||||||||| | ||||||| |   ||||| |||  ||||||||||||||||    
T  249110 ttgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctt 249028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 60570 - 60611
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcat 42  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||    
T  60570 ttgttttggaccaatgaaaagagagaaaatgaaagttgtcat 60611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31568 - 31528
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtca 41  Q
    |||||||| ||||||||||||||||||||| || |||||||    
T  31568 ttgtttttaaccaatgaaaagagagaaaaaaaaagttgtca 31528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 113728 - 113756
Alignment:
Q  1 ttgtttttgaccaatgaaaagagagaaaa 29  Q
    |||||||||||||||||||||||||||||    
T  113728 ttgtttttgaccaatgaaaagagagaaaa 113756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 224115 - 224183
Alignment:
Q  13 aatgaaaagagagaaaaagaaggttgtcattgaagttgttaccaaatggttgttaaaatatcattgctc 81  Q
    |||||||| |||||||||  |  |||||||  ||||||||| ||||| |||||| ||||||||||||||    
T  224115 aatgaaaatagagaaaaaagaaattgtcatcaaagttgttagcaaattgttgttcaaatatcattgctc 224183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University