View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13734_low_9 (Length: 469)

Name: NF13734_low_9
Description: NF13734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13734_low_9
NF13734_low_9
[»] chr8 (48 HSPs)
chr8 (112-254)||(22781890-22782032)
chr8 (112-242)||(2339298-2339428)
chr8 (112-238)||(33642466-33642592)
chr8 (112-255)||(29563666-29563809)
chr8 (112-255)||(34028391-34028534)
chr8 (103-242)||(41569106-41569245)
chr8 (112-255)||(2229067-2229210)
chr8 (115-242)||(25847978-25848105)
chr8 (111-242)||(27793204-27793335)
chr8 (119-242)||(42189818-42189941)
chr8 (132-255)||(43135072-43135195)
chr8 (132-254)||(8242251-8242373)
chr8 (112-242)||(37564641-37564771)
chr8 (132-253)||(30923920-30924041)
chr8 (132-241)||(40465249-40465358)
chr8 (102-242)||(11293197-11293337)
chr8 (112-241)||(43295074-43295202)
chr8 (115-242)||(32159044-32159171)
chr8 (112-238)||(12270070-12270196)
chr8 (112-242)||(41915602-41915732)
chr8 (118-254)||(25878170-25878305)
chr8 (115-242)||(34157671-34157799)
chr8 (115-242)||(7668202-7668329)
chr8 (110-255)||(3799713-3799859)
chr8 (139-241)||(40834171-40834273)
chr8 (112-242)||(45145877-45146003)
chr8 (112-256)||(42351194-42351338)
chr8 (112-242)||(33837588-33837719)
chr8 (114-253)||(29916537-29916676)
chr8 (152-253)||(16928840-16928941)
chr8 (112-242)||(36366033-36366162)
chr8 (197-253)||(10839762-10839818)
chr8 (132-255)||(35011209-35011331)
chr8 (110-167)||(32159040-32159097)
chr8 (197-241)||(8453687-8453731)
chr8 (134-169)||(6197905-6197940)
chr8 (101-168)||(6354731-6354798)
chr8 (112-167)||(41915679-41915734)
chr8 (112-242)||(35149676-35149806)
chr8 (112-166)||(45145951-45146005)
chr8 (110-167)||(11293193-11293250)
chr8 (112-169)||(25848050-25848107)
chr8 (112-172)||(7693113-7693173)
chr8 (103-167)||(24915254-24915318)
chr8 (103-167)||(29563743-29563807)
chr8 (103-167)||(30923920-30923984)
chr8 (115-167)||(40465249-40465301)
chr8 (103-167)||(43135129-43135193)
[»] chr4 (66 HSPs)
chr4 (252-383)||(22453534-22453665)
chr4 (112-257)||(36099495-36099640)
chr4 (103-242)||(31227270-31227409)
chr4 (112-255)||(23125654-23125797)
chr4 (112-242)||(5970289-5970419)
chr4 (112-242)||(31854389-31854519)
chr4 (112-238)||(38687925-38688051)
chr4 (114-242)||(19485582-19485710)
chr4 (114-241)||(47948949-47949076)
chr4 (112-242)||(39877411-39877541)
chr4 (110-255)||(18430250-18430397)
chr4 (115-255)||(55292109-55292249)
chr4 (113-240)||(2279533-2279660)
chr4 (112-255)||(4758774-4758917)
chr4 (112-242)||(35328947-35329077)
chr4 (113-242)||(2385205-2385334)
chr4 (112-242)||(53621338-53621468)
chr4 (112-253)||(18135310-18135453)
chr4 (114-236)||(2411856-2411978)
chr4 (112-242)||(6246616-6246746)
chr4 (112-241)||(580422-580551)
chr4 (117-238)||(56216247-56216368)
chr4 (114-242)||(21221128-21221255)
chr4 (118-238)||(38046624-38046744)
chr4 (112-239)||(44199985-44200112)
chr4 (13-104)||(22453442-22453535)
chr4 (112-238)||(52535965-52536091)
chr4 (143-255)||(20688455-20688567)
chr4 (118-234)||(21229239-21229355)
chr4 (112-239)||(49122534-49122660)
chr4 (103-215)||(51833011-51833123)
chr4 (103-239)||(53303735-53303871)
chr4 (113-216)||(7350242-7350345)
chr4 (112-222)||(39834282-39834392)
chr4 (112-242)||(3085883-3086012)
chr4 (132-242)||(32517780-32517892)
chr4 (118-255)||(15170880-15171017)
chr4 (151-242)||(29833275-29833366)
chr4 (115-222)||(4698634-4698741)
chr4 (299-387)||(51194647-51194735)
chr4 (388-447)||(9981833-9981892)
chr4 (114-185)||(27006515-27006586)
chr4 (115-255)||(4698620-4698760)
chr4 (197-255)||(7350184-7350242)
chr4 (132-238)||(54612002-54612098)
chr4 (112-255)||(30191893-30192036)
chr4 (108-166)||(2643612-2643670)
chr4 (112-210)||(43413584-43413681)
chr4 (110-167)||(31227356-31227413)
chr4 (113-242)||(55190676-55190804)
chr4 (112-172)||(6246688-6246748)
chr4 (197-241)||(21554201-21554245)
chr4 (112-172)||(53225724-53225784)
chr4 (97-172)||(14785009-14785084)
chr4 (132-242)||(3043802-3043911)
chr4 (132-242)||(20745360-20745469)
chr4 (120-218)||(31240876-31240974)
chr4 (112-169)||(29833273-29833330)
chr4 (114-159)||(29834554-29834598)
chr4 (197-242)||(45828508-45828553)
chr4 (114-255)||(48361049-48361190)
chr4 (197-242)||(53225737-53225782)
chr4 (197-253)||(16412233-16412289)
chr4 (103-167)||(31854378-31854442)
chr4 (323-387)||(43038712-43038776)
chr4 (137-169)||(55466115-55466147)
[»] chr1 (42 HSPs)
chr1 (103-242)||(28359081-28359220)
chr1 (112-242)||(2352317-2352447)
chr1 (112-242)||(14281598-14281728)
chr1 (113-242)||(2961114-2961243)
chr1 (101-238)||(28989269-28989406)
chr1 (113-253)||(10380389-10380529)
chr1 (115-242)||(10065265-10065392)
chr1 (103-254)||(29312438-29312589)
chr1 (112-238)||(45536177-45536303)
chr1 (103-242)||(9548671-9548810)
chr1 (112-242)||(9301929-9302059)
chr1 (112-242)||(38830491-38830621)
chr1 (132-253)||(26545025-26545146)
chr1 (115-239)||(24594932-24595055)
chr1 (119-242)||(6784674-6784797)
chr1 (112-222)||(23398088-23398198)
chr1 (132-254)||(26550285-26550407)
chr1 (118-242)||(33325347-33325471)
chr1 (115-242)||(1673982-1674109)
chr1 (118-238)||(40161187-40161307)
chr1 (112-242)||(26733793-26733923)
chr1 (103-241)||(30264785-30264923)
chr1 (103-242)||(7796100-7796239)
chr1 (139-238)||(15289808-15289907)
chr1 (112-201)||(34718899-34718988)
chr1 (115-192)||(23537381-23537458)
chr1 (115-238)||(46320171-46320286)
chr1 (139-226)||(24463324-24463411)
chr1 (92-242)||(43929334-43929483)
chr1 (112-242)||(49944843-49944973)
chr1 (197-255)||(50155391-50155449)
chr1 (103-167)||(10380389-10380453)
chr1 (197-253)||(29256691-29256747)
chr1 (110-169)||(1673978-1674037)
chr1 (112-167)||(9301927-9301982)
chr1 (112-167)||(33325418-33325473)
chr1 (110-253)||(38040282-38040425)
chr1 (112-238)||(44939074-44939200)
chr1 (103-167)||(25021316-25021380)
chr1 (111-167)||(27422992-27423048)
chr1 (112-235)||(29892149-29892270)
chr1 (197-241)||(34146897-34146941)
[»] chr6 (28 HSPs)
chr6 (112-242)||(390815-390945)
chr6 (112-254)||(766425-766567)
chr6 (110-255)||(7405450-7405595)
chr6 (115-242)||(885612-885739)
chr6 (112-255)||(24949628-24949771)
chr6 (112-255)||(31971027-31971170)
chr6 (103-239)||(6801564-6801700)
chr6 (112-242)||(6047806-6047936)
chr6 (110-255)||(33859496-33859641)
chr6 (115-226)||(17225269-17225380)
chr6 (110-253)||(34639039-34639182)
chr6 (112-242)||(6045691-6045821)
chr6 (96-254)||(8558912-8559069)
chr6 (114-239)||(30686554-30686679)
chr6 (117-241)||(13144220-13144344)
chr6 (112-222)||(14931266-14931371)
chr6 (112-199)||(22898861-22898948)
chr6 (139-217)||(36351-36429)
chr6 (112-198)||(22880926-22881012)
chr6 (114-172)||(1158325-1158383)
chr6 (112-242)||(2810089-2810218)
chr6 (110-254)||(5483867-5484011)
chr6 (114-242)||(28630763-28630891)
chr6 (112-167)||(24949639-24949694)
chr6 (137-242)||(1158278-1158383)
chr6 (114-167)||(8558924-8558977)
chr6 (162-235)||(28863337-28863410)
chr6 (112-172)||(2943322-2943382)
[»] scaffold0002 (1 HSPs)
scaffold0002 (114-242)||(492315-492443)
[»] chr2 (52 HSPs)
chr2 (114-242)||(42263480-42263608)
chr2 (112-255)||(29866090-29866233)
chr2 (112-255)||(13775719-13775862)
chr2 (103-239)||(32880906-32881042)
chr2 (114-238)||(43657939-43658063)
chr2 (115-242)||(32197387-32197514)
chr2 (112-242)||(16241277-16241407)
chr2 (112-254)||(41260033-41260175)
chr2 (112-253)||(20427009-20427150)
chr2 (112-241)||(25891955-25892084)
chr2 (112-241)||(40430677-40430806)
chr2 (112-242)||(6761473-6761603)
chr2 (113-255)||(7765791-7765933)
chr2 (112-241)||(2100025-2100154)
chr2 (117-238)||(11363012-11363133)
chr2 (117-243)||(45065589-45065715)
chr2 (135-256)||(32750338-32750459)
chr2 (118-254)||(1944532-1944668)
chr2 (132-255)||(42341646-42341769)
chr2 (112-255)||(44737280-44737422)
chr2 (112-222)||(11711354-11711464)
chr2 (117-239)||(3264935-3265053)
chr2 (112-253)||(38598464-38598605)
chr2 (114-242)||(18452579-18452706)
chr2 (112-238)||(4740718-4740844)
chr2 (113-238)||(41205504-41205629)
chr2 (118-210)||(30864717-30864809)
chr2 (141-241)||(33913188-33913288)
chr2 (175-239)||(20360515-20360579)
chr2 (103-172)||(39377911-39377980)
chr2 (112-172)||(39377844-39377904)
chr2 (181-241)||(42470922-42470982)
chr2 (139-222)||(22857834-22857917)
chr2 (103-217)||(3037758-3037874)
chr2 (149-242)||(20555268-20555361)
chr2 (113-218)||(44736813-44736918)
chr2 (112-248)||(38983007-38983143)
chr2 (112-255)||(4063269-4063411)
chr2 (113-172)||(12486072-12486131)
chr2 (112-222)||(9152387-9152497)
chr2 (203-253)||(34447602-34447652)
chr2 (112-258)||(45034392-45034537)
chr2 (122-217)||(22857822-22857917)
chr2 (137-172)||(27596729-27596764)
chr2 (118-172)||(27182089-27182143)
chr2 (118-172)||(27831631-27831685)
chr2 (102-172)||(38598536-38598606)
chr2 (197-255)||(41205583-41205641)
chr2 (197-250)||(28249026-28249079)
chr2 (103-167)||(11711323-11711387)
chr2 (197-241)||(41153204-41153248)
chr2 (103-167)||(42341703-42341767)
[»] scaffold0123 (1 HSPs)
scaffold0123 (112-242)||(29252-29382)
[»] chr5 (44 HSPs)
chr5 (103-243)||(41989563-41989703)
chr5 (112-255)||(13144888-13145031)
chr5 (112-242)||(31802968-31803098)
chr5 (115-255)||(18353205-18353345)
chr5 (110-255)||(36418982-36419127)
chr5 (93-242)||(37699790-37699939)
chr5 (103-254)||(20578653-20578804)
chr5 (112-255)||(25027702-25027845)
chr5 (112-242)||(7749926-7750056)
chr5 (112-238)||(41046836-41046962)
chr5 (112-241)||(21610312-21610441)
chr5 (103-239)||(15569344-15569480)
chr5 (114-241)||(6338326-6338453)
chr5 (112-242)||(903976-904106)
chr5 (112-242)||(1108291-1108421)
chr5 (112-242)||(9601603-9601733)
chr5 (113-255)||(36417044-36417186)
chr5 (114-255)||(26898201-26898342)
chr5 (91-241)||(16089097-16089249)
chr5 (115-255)||(29374181-29374321)
chr5 (112-217)||(7945845-7945950)
chr5 (135-255)||(23411196-23411316)
chr5 (103-242)||(2959249-2959388)
chr5 (103-242)||(2967718-2967857)
chr5 (112-255)||(7053656-7053798)
chr5 (115-242)||(41815196-41815323)
chr5 (112-255)||(1643352-1643495)
chr5 (139-241)||(2825895-2825997)
chr5 (115-242)||(42311820-42311947)
chr5 (132-242)||(21090386-21090496)
chr5 (118-226)||(6910726-6910834)
chr5 (113-217)||(14338824-14338928)
chr5 (103-219)||(38393788-38393904)
chr5 (113-242)||(15968321-15968449)
chr5 (112-238)||(1138226-1138351)
chr5 (112-242)||(22731267-22731396)
chr5 (112-242)||(27488357-27488486)
chr5 (112-169)||(42311818-42311875)
chr5 (112-167)||(21090384-21090439)
chr5 (139-168)||(7272241-7272270)
chr5 (110-167)||(7750003-7750060)
chr5 (115-167)||(2825945-2825997)
chr5 (202-242)||(29299367-29299407)
chr5 (197-241)||(38394439-38394483)
[»] chr3 (62 HSPs)
chr3 (112-242)||(14768106-14768236)
chr3 (112-254)||(18765256-18765398)
chr3 (112-241)||(335386-335515)
chr3 (112-255)||(42605824-42605967)
chr3 (112-242)||(9465081-9465211)
chr3 (112-242)||(19202260-19202390)
chr3 (112-242)||(25846521-25846651)
chr3 (132-242)||(40464550-40464660)
chr3 (112-242)||(49122952-49123082)
chr3 (112-253)||(25113348-25113489)
chr3 (114-242)||(21653354-21653482)
chr3 (112-255)||(26999029-26999172)
chr3 (112-242)||(6086911-6087041)
chr3 (97-242)||(9440138-9440283)
chr3 (114-231)||(52114045-52114162)
chr3 (115-238)||(23825160-23825283)
chr3 (112-243)||(29019743-29019874)
chr3 (115-242)||(47449927-47450054)
chr3 (112-242)||(10049676-10049806)
chr3 (103-241)||(9190027-9190165)
chr3 (110-242)||(28564945-28565077)
chr3 (115-255)||(51698111-51698251)
chr3 (112-255)||(8243679-8243822)
chr3 (112-242)||(28945664-28945794)
chr3 (112-242)||(40214910-40215040)
chr3 (112-242)||(379078-379211)
chr3 (112-242)||(42225572-42225702)
chr3 (112-253)||(13826120-13826261)
chr3 (134-242)||(1122305-1122413)
chr3 (117-238)||(44593215-44593336)
chr3 (103-253)||(22003794-22003945)
chr3 (103-253)||(22011311-22011462)
chr3 (135-217)||(8825762-8825844)
chr3 (103-196)||(40141930-40142023)
chr3 (115-242)||(39341382-39341512)
chr3 (160-242)||(26123046-26123128)
chr3 (114-236)||(3484342-3484460)
chr3 (151-216)||(42841635-42841700)
chr3 (288-387)||(25376291-25376390)
chr3 (132-217)||(55139201-55139286)
chr3 (133-198)||(16660334-16660401)
chr3 (137-219)||(8987762-8987844)
chr3 (101-219)||(22003829-22003947)
chr3 (101-219)||(22011346-22011464)
chr3 (112-242)||(28406475-28406605)
chr3 (112-217)||(48593177-48593282)
chr3 (303-388)||(54392226-54392311)
chr3 (103-255)||(8243681-8243833)
chr3 (110-241)||(54537454-54537585)
chr3 (299-385)||(52694726-52694812)
chr3 (121-169)||(19880869-19880917)
chr3 (197-241)||(43448969-43449013)
chr3 (197-241)||(51723389-51723433)
chr3 (112-167)||(10049753-10049808)
chr3 (197-255)||(21662883-21662941)
chr3 (112-166)||(28406553-28406607)
chr3 (112-242)||(53441915-53442045)
chr3 (110-167)||(1122360-1122417)
chr3 (114-167)||(29019820-29019873)
chr3 (114-239)||(29457850-29457974)
chr3 (393-447)||(33129908-33129959)
chr3 (155-239)||(49885392-49885475)
[»] chr7 (46 HSPs)
chr7 (96-242)||(5347733-5347878)
chr7 (112-242)||(23248678-23248808)
chr7 (110-255)||(12763235-12763380)
chr7 (94-241)||(3411322-3411469)
chr7 (112-255)||(30866253-30866396)
chr7 (132-242)||(29770350-29770460)
chr7 (112-253)||(7463457-7463599)
chr7 (118-239)||(32050093-32050214)
chr7 (119-254)||(19979491-19979627)
chr7 (118-242)||(34281679-34281803)
chr7 (103-242)||(5909481-5909620)
chr7 (103-238)||(12426544-12426679)
chr7 (112-242)||(20397823-20397953)
chr7 (112-242)||(35427669-35427799)
chr7 (115-242)||(10599325-10599453)
chr7 (112-255)||(7107638-7107781)
chr7 (113-241)||(46680840-46680968)
chr7 (134-242)||(12085034-12085142)
chr7 (112-216)||(15074630-15074729)
chr7 (103-242)||(6173938-6174072)
chr7 (96-238)||(17351486-17351627)
chr7 (388-447)||(3614661-3614720)
chr7 (115-242)||(26563932-26564059)
chr7 (117-225)||(46449805-46449913)
chr7 (388-447)||(35611827-35611886)
chr7 (388-447)||(5569060-5569116)
chr7 (112-254)||(4826760-4826901)
chr7 (137-242)||(8566114-8566219)
chr7 (181-238)||(36655436-36655493)
chr7 (103-243)||(18672102-18672241)
chr7 (112-167)||(7107715-7107770)
chr7 (155-242)||(10007627-10007714)
chr7 (115-222)||(22055760-22055867)
chr7 (114-217)||(26563956-26564059)
chr7 (288-387)||(41422987-41423086)
chr7 (197-255)||(29365714-29365772)
chr7 (112-242)||(36245384-36245514)
chr7 (197-242)||(2523863-2523908)
chr7 (103-168)||(12085023-12085088)
chr7 (112-169)||(23248676-23248733)
chr7 (197-238)||(23870993-23871034)
chr7 (112-241)||(28677325-28677454)
chr7 (197-238)||(41850610-41850651)
chr7 (299-387)||(22629201-22629289)
chr7 (154-226)||(32903572-32903644)
chr7 (137-169)||(46449811-46449843)
[»] scaffold2107 (2 HSPs)
scaffold2107 (114-255)||(453-594)
scaffold2107 (112-167)||(528-583)
[»] scaffold0144 (1 HSPs)
scaffold0144 (112-255)||(38833-38976)
[»] scaffold0221 (1 HSPs)
scaffold0221 (112-242)||(11038-11168)
[»] scaffold0246 (1 HSPs)
scaffold0246 (114-242)||(15165-15292)
[»] scaffold0024 (1 HSPs)
scaffold0024 (112-242)||(35962-36092)
[»] scaffold0592 (1 HSPs)
scaffold0592 (132-241)||(407-516)
[»] scaffold0007 (1 HSPs)
scaffold0007 (139-242)||(77355-77458)
[»] scaffold0009 (1 HSPs)
scaffold0009 (118-242)||(3641-3774)
[»] scaffold0067 (1 HSPs)
scaffold0067 (117-239)||(5229-5351)
[»] scaffold1903 (1 HSPs)
scaffold1903 (388-447)||(904-963)
[»] scaffold0018 (1 HSPs)
scaffold0018 (118-216)||(183828-183926)
[»] scaffold0005 (1 HSPs)
scaffold0005 (97-172)||(54646-54721)
[»] scaffold0242 (1 HSPs)
scaffold0242 (197-254)||(16505-16562)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 8e-56; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 22781890 - 22782032
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  22781890 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 22781989  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
     |||||||||||||| |||||||||||||||  ||||||||||    
T  22781990 caaaaaatcaactttctcttataaataggaccggaggaagtat 22782032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 2339298 - 2339428
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2339298 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2339397  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  2339398 taaaaagtcaactttctcttgtaaataggac 2339428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 33642466 - 33642592
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  33642466 cggtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 33642565  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    ||||||||||||||| |||| ||||||    
T  33642566 taaaaaatcaactttctcttgtaaata 33642592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 29563666 - 29563809
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  29563666 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattgaatgtatc 29563765  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||||||| |||| ||||||||||  |||||||||||    
T  29563766 taaaaagtcaactttctcttgtaaataggaccggaggaagtatt 29563809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 34028391 - 34028534
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  34028391 cggtcctatttacaagtaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 34028490  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||  |||||||| |||| ||||||||||  |||| ||||||    
T  34028491 taaaaggtcaactttctcttgtaaataggaccggagggagtatt 34028534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 41569245 - 41569106
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||||| || |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  41569245 tacttcatccgatcctatttacaagaaacaatttactttttagatatattaaataatttatgtatttggttgaggttcttgactagatacatacattatt 41569146  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||| ||||||||||||||||||| |||| ||||||||||    
T  41569145 caatatatctaaaaaatcaactttctcttgtaaataggac 41569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 2229210 - 2229067
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  2229210 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcattgtatc 2229111  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  2229110 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 2229067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 25847978 - 25848105
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  25847978 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaa 25848077  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    ||| |||||| | |||| ||||||||||    
T  25848078 aaagtcaactgtctcttgtaaataggac 25848105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 27793204 - 27793335
Alignment:
Q  111 tcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 210  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||||| ||| |||    
T  27793204 tcggtcctatttacaagagataatttactttttagatgcattaaataatttatgtatttggtttaggttcttgaccagatatatacattattgaatatat 27793303  T
Q  211 ctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||| |||||||| |||| ||||||||||    
T  27793304 ctaaaaagtcaactttctcttgtaaataggac 27793335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 119 - 242
Target Start/End: Original strand, 42189818 - 42189941
Alignment:
Q  119 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 218  Q
    ||||||||||   ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||     
T  42189818 atttacaagagacaatttactttttaaatatattaaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaag 42189917  T
Q  219 tcaactttatcttataaataggac 242  Q
    ||||||||||| ||||||||||||    
T  42189918 tcaactttatcatataaataggac 42189941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 43135072 - 43135195
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||    
T  43135072 aatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctctt 43135171  T
Q  232 ataaataggactagaggaagtatt 255  Q
     ||||||||||  |||||||||||    
T  43135172 gtaaataggaccggaggaagtatt 43135195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 8242251 - 8242373
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||    
T  8242251 aatttactttttaaatacattaaatgatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaaatcaaatttctttt 8242350  T
Q  232 ataaataggactagaggaagtat 254  Q
    ||||||||||||||||| |||||    
T  8242351 ataaataggactagagggagtat 8242373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 37564771 - 37564641
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||||||||     
T  37564771 cggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttaactagatgcatacattattcaatgtatt 37564672  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||||||||||||||    
T  37564671 taaaaagtcaactttctcttataaataggac 37564641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 132 - 253
Target Start/End: Complemental strand, 30924041 - 30923920
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| |||||| | ||||    
T  30924041 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatctaaaaagtcaactgtctctt 30923942  T
Q  232 ataaataggactagaggaagta 253  Q
     ||||||||||  |||||||||    
T  30923941 gtaaataggaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 40465358 - 40465249
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||    
T  40465358 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaattttctctt 40465259  T
Q  232 ataaatagga 241  Q
     |||||||||    
T  40465258 gtaaatagga 40465249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 11293337 - 11293197
Alignment:
Q  102 ttacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 201  Q
    ||||||| | |||||||||||||||||   ||||||||||||| ||||||||||| |||||||||  |||| |||||||||||||||||| |||||||||    
T  11293337 ttacttcctccggtcctatttacaagagacaatttactttttaaatacattaaatcatttatgtaaatggtttaggttcttgactagatacatacattat 11293238  T
Q  202 tcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||||||||||||||| |||||||| |||| ||||||||||    
T  11293237 tcaatgtatctaaaaagtcaactttctcttgtaaataggac 11293197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 43295202 - 43295074
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||| ||  |||  |||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  43295202 cggtcctatttacaaaaacaaata-actttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 43295104  T
Q  212 taaaaaatcaactttatcttataaatagga 241  Q
    |||||| | |||||| ||||||||||||||    
T  43295103 taaaaagttaactttctcttataaatagga 43295074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 32159171 - 32159044
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||| |||||||||||    
T  32159171 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttagattcttgattagatacatacattatttaatgtatctaa 32159072  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    ||| |||| ||| |||| ||||||||||    
T  32159071 aaagtcaaatttctcttgtaaataggac 32159044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 12270196 - 12270070
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||| ||||||| |||||||    
T  12270196 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactaaatatatatattattcgatgtatc 12270097  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    |||||| |||||||| |||| ||||||    
T  12270096 taaaaagtcaactttctcttgtaaata 12270070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 41915602 - 41915732
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| ||||   |||||| |||||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||    
T  41915602 cggtcctatttataagagacaatttaatttttagatacattaaataatttatgtatttggtttagattattgactagatacatacattattcaatgtatc 41915701  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| ||| |||| ||||||||||    
T  41915702 taaaaagtcaattttctcttgtaaataggac 41915732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 25878305 - 25878170
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| ||||||    
T  25878305 tatttacaagaaacaatttactttt-agatacattatataatttatgtatttgatttaggttcttgactagatacatacattcttcaatgtatttaaaaa 25878207  T
Q  218 atcaactttatcttataaataggactagaggaagtat 254  Q
     |||| ||| |||||||||||||||| |||| |||||    
T  25878206 gtcaattttctcttataaataggactggagggagtat 25878170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 34157671 - 34157799
Alignment:
Q  115 tcctatttacaagaattaatttactttt-tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||| |    
T  34157671 tcctatttacaagagataatttacttttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcgatgtatcca 34157770  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    |||| |||| ||| |||| ||||||||||    
T  34157771 aaaattcaaatttctcttgtaaataggac 34157799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 7668202 - 7668329
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||    
T  7668202 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatttaa 7668301  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    |||  ||| ||| |||| ||||||||||    
T  7668302 aaagacaattttctcttgtaaataggac 7668329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 255
Target Start/End: Complemental strand, 3799859 - 3799713
Alignment:
Q  110 ttcggtcctatttacaagaattaatttacttttt-agatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgt 208  Q
    ||||||||||||||||| |   |||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  3799859 ttcggtcctatttacaatagacaatttacttttttaaatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgt 3799760  T
Q  209 atctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||||||  | ||||| |||||||||| ||||  |||| ||||||    
T  3799759 atctaaaaagccgactttctcttataaatgggaccggagggagtatt 3799713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 40834171 - 40834273
Alignment:
Q  139 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 238  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||  ||| ||| |||||||||||    
T  40834171 tttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaagacaattttctcttataaata 40834270  T
Q  239 gga 241  Q
    |||    
T  40834271 gga 40834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 45145877 - 45146003
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    || |||||||||||||||||||    
T  45145877 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtttttggtttaggttcttgac----tacatacattattcaatgtatc 45145972  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| ||| |||| ||||||||||    
T  45145973 taaaaagtcaattttctcttgtaaataggac 45146003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 112 - 256
Target Start/End: Complemental strand, 42351338 - 42351194
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||| |||||| ||||||||    
T  42351338 cggtcctatttacaagagacaatttattttttagatacattaaataatttatatatttgatttaggttcttgactagatacatatattatttaatgtatc 42351239  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtattc 256  Q
    |||||| ||||| || |||| |||||| |||  |||| |||||||    
T  42351238 taaaaagtcaacattctcttgtaaataagaccggagggagtattc 42351194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 33837588 - 33837719
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||| ||||||||||||   ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||| ||| ||||||||||||||     
T  33837588 cggttctatttacaagagacaatttactttttagatacattaaataatttatgcatttagtttagattcttgactagatacataaattattcaatgtatt 33837687  T
Q  212 t-aaaaaatcaactttatcttataaataggac 242  Q
    | |||||||||||||| |||| ||||||||||    
T  33837688 taaaaaaatcaactttctcttgtaaataggac 33837719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 29916537 - 29916676
Alignment:
Q  114 gtcctatttacaagaattaatttactttt-tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| || | |||| |||||||||||| |    
T  29916537 gtcctatttacaagaaacaatttacttttttagatacattaaataatttatgtatttggtttaagttcttgactaaat-actacaatattcaatgtatat 29916635  T
Q  213 aaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    ||||| ||||  || ||||||||||| ||||||||| ||||    
T  29916636 aaaaagtcaatcttctcttataaataagactagagggagta 29916676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 16928941 - 16928840
Alignment:
Q  152 taaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaag 251  Q
    ||||||||||||||||||||| ||| ||||||| |||||| ||| |||||||||| |||||||||  ||||| || |||| ||||||||||| |||| ||    
T  16928941 taaataatttatgtatttggtttagattcttgagtagatacataaattattcaatttatctaaaatgtcaacattctcttgtaaataggactggagggag 16928842  T
Q  252 ta 253  Q
    ||    
T  16928841 ta 16928840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 36366033 - 36366162
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| |||    
T  36366033 cggtcctatatataagaaacaatttacttttttgattcattcaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatc 36366131  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||||| |||||| |||||||||||||||    
T  36366132 taaaaaattaactttttcttataaataggac 36366162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 10839818 - 10839762
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||| |||||||||    
T  10839818 attattcaatgaatctaaaaagtcaattttttcttataaataggactggaggaagta 10839762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 35011331 - 35011209
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  35011331 aatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattattgaatgaatctaaaaaattaactttttctt 35011233  T
Q  232 ataaataggactagaggaagtatt 255  Q
    |||||||||||  |||| ||||||    
T  35011232 ataaataggaccggaggtagtatt 35011209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 32159040 - 32159097
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  32159040 ttcggtcctatttacaagagaaatttgactttttagatacattaaataatgtatgtat 32159097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 8453687 - 8453731
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||    
T  8453687 attactcaatgtatctaaaaaatcaaatttttcttataaatagga 8453731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 169
Target Start/End: Complemental strand, 6197940 - 6197905
Alignment:
Q  134 tttactttttagatacattaaataatttatgtattt 169  Q
    ||||||||||||||||||||||||||| ||||||||    
T  6197940 tttactttttagatacattaaataattaatgtattt 6197905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 6354798 - 6354731
Alignment:
Q  101 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatt 168  Q
    |||||||||| |  ||||||||| ||||| ||||| | ||||||||| |||| |||||||||||||||    
T  6354798 attacttcatccaatcctatttataagaaataattaattttttagattcattgaataatttatgtatt 6354731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 41915734 - 41915679
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  41915734 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 41915679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 35149676 - 35149806
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| |||||  | || ||||||| |||  |||  |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||  ||||  |||    
T  35149676 cggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaataaatc 35149775  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||||| |||||||||||||||    
T  35149776 taaaaaatcaactttttcttataaataggac 35149806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 45146005 - 45145951
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 166  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| ||||||    
T  45146005 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgta 45145951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 11293193 - 11293250
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  11293193 ttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 11293250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 25848107 - 25848050
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 169  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| |||||||||    
T  25848107 cggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtattt 25848050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 7693173 - 7693113
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    |||||||||||| |||||  |||| ||||||||||| |||| | ||||| |||||||||||    
T  7693173 cggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggt 7693113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 24915318 - 24915254
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||| ||| |||||||||||| | |||  |||| ||||||||||| |||||||||||| ||||||    
T  24915318 tactacatccggtcctatttatatgaaaaaattaactttttagattcattaaataattgatgtat 24915254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 29563807 - 29563743
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  29563807 tacttcctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtat 29563743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 30923920 - 30923984
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  30923920 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 30923984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 40465249 - 40465301
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    ||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  40465249 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 40465301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 43135193 - 43135129
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||| | |||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  43135193 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 43135129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 5e-54; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 252 - 383
Target Start/End: Original strand, 22453534 - 22453665
Alignment:
Q  252 tattctaactagtataactaattaaaatgtagtgtggtgaatgtattataggatctataaacttgtataatctaatggttagaaatcttggtccaatctg 351  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22453534 tattctaactagtagaactaattaaaatgtagcgtggtgaatgcattataggatctataaacttgtataatctaatggtcataaatcttggtccaatctg 22453633  T
Q  352 gaccaatacatccatgggtgcatggtaaacgg 383  Q
    |||||||||||||||||||||||| |||||||    
T  22453634 gaccaatacatccatgggtgcatgctaaacgg 22453665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 112 - 257
Target Start/End: Original strand, 36099495 - 36099640
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  36099495 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 36099594  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtattct 257  Q
    ||||||||||||| | |||| ||||||||||  |||| ||||||||    
T  36099595 taaaaaatcaactgtctcttgtaaataggaccggagggagtattct 36099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 31227270 - 31227409
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||| ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  31227270 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 31227369  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
     |||||||||||||| |||||||| |||| ||||||||||    
T  31227370 taatgtatctaaaaagtcaactttctcttgtaaataggac 31227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 23125654 - 23125797
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  23125654 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatc 23125753  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||||| ||||||||| |||| |||||| |||| |||| ||||||    
T  23125754 taaaatatcaactttctcttgtaaataagactggagggagtatt 23125797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 5970419 - 5970289
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5970419 cggtcctatttacaagagacaatttactttttagacacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 5970320  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| | |||||||||||||    
T  5970319 taaaaagtcaactttcttttataaataggac 5970289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 31854519 - 31854389
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  31854519 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtatc 31854420  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||| ||||||    
T  31854419 taaaaagtcaactttctcttgtaattaggac 31854389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 38688051 - 38687925
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  38688051 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacgtacattattcaatgtatc 38687952  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    |||||| |||||||| |||| ||||||    
T  38687951 taaaaagtcaactttctcttgtaaata 38687925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 19485582 - 19485710
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  19485582 gtcctatttacaagaaacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatcta 19485681  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    ||||||||| ||| |||| ||||||||||    
T  19485682 aaaaatcaattttctcttgtaaataggac 19485710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 47948949 - 47949076
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  47948949 gtcctacttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 47949048  T
Q  214 aaaaatcaactttatcttataaatagga 241  Q
    ||||||||||||| |||||||| |||||    
T  47949049 aaaaatcaactttctcttataattagga 47949076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 39877411 - 39877541
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |    
T  39877411 cggtcctatttacaagaaacgatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgtacc 39877510  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  39877511 taaaaagtcaactttctcttgtaaataggac 39877541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 110 - 255
Target Start/End: Complemental strand, 18430397 - 18430250
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||    
T  18430397 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgta 18430298  T
Q  210 tctaaaa--aatcaactttatcttataaataggactagaggaagtatt 255  Q
    | |||||  | |||||||| |||| |||||||||| ||||| ||||||    
T  18430297 tttaaaaagagtcaactttctcttgtaaataggaccagagggagtatt 18430250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 55292249 - 55292109
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||    
T  55292249 tcctatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttaggttctcgactagatatatacattattcaatgtatctaa 55292150  T
Q  215 aaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||| |||| ||| |||| ||||||||||  |||||||||||    
T  55292149 aaagtcaaatttctcttgtaaataggaccggaggaagtatt 55292109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 113 - 240
Target Start/End: Original strand, 2279533 - 2279660
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  2279533 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 2279632  T
Q  213 aaaaaatcaactttatcttataaatagg 240  Q
    ||||| |||||||| |||| ||||||||    
T  2279633 aaaaagtcaactttctcttgtaaatagg 2279660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 4758917 - 4758774
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  4758917 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttaactagatacatacattattcaatgtatc 4758818  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  4758817 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 4758774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 35328947 - 35329077
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  35328947 cggtcctatttacaaaaaataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 35329046  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| | | |||| |||| |||| |||||    
T  35329047 taaaaagtgacctttctcttgtaaacaggac 35329077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 2385334 - 2385205
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    ||||||||||||||||   |||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||||||    
T  2385334 ggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatct 2385235  T
Q  213 aaaaaatcaactttatcttataaataggac 242  Q
    ||||| |||||||| |||| ||||||||||    
T  2385234 aaaaagtcaactttctcttgtaaataggac 2385205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 53621468 - 53621338
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||||| |||||||||||||||||||    
T  53621468 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttcattagatacatacattattcaatgtatc 53621369  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||| | |||| ||||||||||    
T  53621368 taaaaagtcaactgtctcttgtaaataggac 53621338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 18135453 - 18135310
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||     
T  18135453 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatt 18135354  T
Q  212 taaaa--aatcaactttatcttataaataggactagaggaagta 253  Q
    |||||  | |||||||| |||| |||||||||| ||||| ||||    
T  18135353 taaaaagagtcaactttctcttgtaaataggaccagagggagta 18135310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 2411978 - 2411856
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||| ||    
T  2411978 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttagtttagattcttgactagatacatacattattcaatgtattta 2411879  T
Q  214 aaaaatcaactttatcttataaa 236  Q
    |||| | | |||| |||||||||    
T  2411878 aaaagtgatctttctcttataaa 2411856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 6246616 - 6246746
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||| |||||| ||||||||    
T  6246616 cggttctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgaccaaatacatatattattgaatgtatc 6246715  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  6246716 taaaaagtcaactttctcttgtaaataggac 6246746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 580551 - 580422
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||||||| |||||    
T  580551 cggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaacgtatc 580452  T
Q  212 taaaaaatcaactttatcttataaatagga 241  Q
    |||||| |||| ||| |||| |||||||||    
T  580451 taaaaagtcaattttctcttgtaaatagga 580422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 56216247 - 56216368
Alignment:
Q  117 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| | | ||||| |||| ||| ||||||||||||||||||||||||    
T  56216247 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttggattcttaactaaatacatacattattcaatgtatctaaaa 56216346  T
Q  217 aatcaactttatcttataaata 238  Q
    | |||||||| |||||||||||    
T  56216347 agtcaactttctcttataaata 56216368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 21221128 - 21221255
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||    
T  21221128 gtcctatttacaaaaac-aatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatatattattcaatgtatcta 21221226  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    |||| | | |||| ||||||||| |||||    
T  21221227 aaaagtgatctttctcttataaacaggac 21221255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 118 - 238
Target Start/End: Original strand, 38046624 - 38046744
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||||||||||  ||||||| |||| ||||| || |||||||||||||||||||| ||| || ||||||| ||| |||||||||||||||||||||||||    
T  38046624 tatttacaagagataatttatttttcagatatataaaataatttatgtatttggtttagatttttgactaaatacatacattattcaatgtatctaaaaa 38046723  T
Q  218 atcaactttatcttataaata 238  Q
    |||||||||||||||||||||    
T  38046724 atcaactttatcttataaata 38046744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 44200112 - 44199985
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||| |||||||||||   ||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||| ||||    
T  44200112 cggtcttatttacaagagacaatttactttttagatacactaaataatttatgtatttggtttagattcctgactagatatatacattattcaatatatc 44200013  T
Q  212 taaaaaatcaactttatcttataaatag 239  Q
     |||||||||||||| |||| |||||||    
T  44200012 aaaaaaatcaactttctcttgtaaatag 44199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 22453442 - 22453535
Alignment:
Q  13 aatatcaagaaggatggagggagaaagtggaggaggagaaggg--ttccagcaataaatttcctaaaggagagagaaagagaaataaaaaatta 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22453442 aatagcaagaaggatggagggagaaagtggaggaggagaaggggtttccagcaataaatttcctaaaggagagagaaagggaaataaaaaatta 22453535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 52536091 - 52535965
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| | |||||| || |||||||| |||||||||||||||||||    
T  52536091 cggtcctatttacaagatacaattaactttttatatacattaaataatttatgtatttgatttaggtttttaactagatacatacattattcaatgtatc 52535992  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    |||||| | |||||| |||||||||||    
T  52535991 taaaaagttaactttttcttataaata 52535965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 20688455 - 20688567
Alignment:
Q  143 tagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  20688455 tagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 20688554  T
Q  243 tagaggaagtatt 255  Q
      |||| ||||||    
T  20688555 cggaggtagtatt 20688567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 21229239 - 21229355
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    ||||||||||||  ||||||   |||| ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  21229239 tatttacaagaaacaatttatcatttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaa 21229338  T
Q  218 atcaactttatcttata 234  Q
    || | ||||||||||||    
T  21229339 atgatctttatcttata 21229355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 49122660 - 49122534
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||||| |||||||||||||||| ||    
T  49122660 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttaactagatacatacattattcaatgt-tc 49122562  T
Q  212 taaaaaatcaactttatcttataaatag 239  Q
    |||||| |||||| | |||| |||||||    
T  49122561 taaaaagtcaactgtctcttgtaaatag 49122534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 103 - 215
Target Start/End: Original strand, 51833011 - 51833123
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||| ||| |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||    
T  51833011 tactccatccggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgaataaatatatacattatt 51833110  T
Q  203 caatgtatctaaa 215  Q
    || ||||||||||    
T  51833111 cattgtatctaaa 51833123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 53303735 - 53303871
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||| ||| ||||||||||||||||    |||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||||||||    
T  53303735 tactccatccggtcctatttacaagtgacaatttattttttagatacactaaataatttatgtatttggtttagattcttgactaaatacatacattatt 53303834  T
Q  203 caatgtatctaaaaaatcaactttatcttataaatag 239  Q
    |||||||||||||||| | | ||| |||| |||||||    
T  53303835 caatgtatctaaaaaaaccattttctcttgtaaatag 53303871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 7350345 - 7350242
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    |||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| ||| |    
T  7350345 ggtcatatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatatattt 7350246  T
Q  213 aaaa 216  Q
    ||||    
T  7350245 aaaa 7350242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 39834282 - 39834392
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||| |||||||||||   |||||| ||||||||||||||||||||||||| ||||| || ||||||||||| |||||| ||||||||||||||||||     
T  39834282 cggtcttatttacaagagacaatttattttttagatacattaaataatttatatattttgtttaggttcttgattagatacatacattattcaatgtatt 39834381  T
Q  212 taaaaaatcaa 222  Q
    |||||||||||    
T  39834382 taaaaaatcaa 39834392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 3086012 - 3085883
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||||||||| ||    
T  3086012 cggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttatgttattgactaaatacatacattattcaatgt-tc 3085914  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| | |  ||| |||| ||||||||||    
T  3085913 taaaaagttatttttctcttgtaaataggac 3085883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 32517892 - 32517780
Alignment:
Q  132 aatttactttttag-atacattaaataattt-atgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatc 229  Q
    |||||| ||||||| ||| |||||||||||| ||||||||| | ||| |||||||||||||| ||| ||||||||||||||||||||| |||||||| ||    
T  32517892 aatttattttttagtatatattaaataattttatgtatttgatttagattcttgactagatacatatattattcaatgtatctaaaaagtcaactttctc 32517793  T
Q  230 ttataaataggac 242  Q
    |||||||||||||    
T  32517792 ttataaataggac 32517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 15171017 - 15170880
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    ||||||||| ||  ||||||||||||||||||||| ||||||||||||||||| | || |||||||| ||| || ||| |||||||||||||| ||||||    
T  15171017 tatttacaaaaaacaatttactttttagatacattgaataatttatgtatttgatttatgttcttgattagttacatatattattcaatgtatttaaaaa 15170918  T
Q  218 atcaactttatcttataaataggactagaggaagtatt 255  Q
     |||| ||| |||| |||||| |||  |||| ||||||    
T  15170917 gtcaattttctcttgtaaataagaccggagggagtatt 15170880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 29833366 - 29833275
Alignment:
Q  151 ttaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||||||||||||||||||| | |||||||||||||| ||| ||| ||| ||||||||||||||||| |||| |||||||| ||||||||||    
T  29833366 ttaaataatttatgtatttgatttaggttcttgactaaatacatatattcttcaatgtatctaaaaagtcaattttatcttgtaaataggac 29833275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 4698634 - 4698741
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||| ||||||||||  |||| | |||||||||||||| |||||||||||||| |||| ||| |||| ||| | ||| ||| ||||||||||||||||||    
T  4698634 tcctttttacaagaaacaattgaatttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaatgtatctaa 4698733  T
Q  215 aaaatcaa 222  Q
    ||||||||    
T  4698734 aaaatcaa 4698741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 51194735 - 51194647
Alignment:
Q  299 ataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 387  Q
    |||||||||||||| ||||  || |||||||| ||||||||||||||| | |||||||||||||||||| || |||| |||||||||||    
T  51194735 ataggatctataaatttgttcaagctaatggtaagaaatcttggtccagtatggaccaatacatccatgagtccatgctaaacggcacc 51194647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 447
Target Start/End: Complemental strand, 9981892 - 9981833
Alignment:
Q  388 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactcca 447  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  9981892 ctctttctaatatgctacaaaaatcatcttcttcatccttaccttattattctcactcca 9981833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 27006515 - 27006586
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgac 185  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||    
T  27006515 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttagattcttgac 27006586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 4698760 - 4698620
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||||||||||| ||  |||| | |||||||||||||| |||||||||||||| |||| |||  |||  || ||||| ||| ||||||||||||||||||    
T  4698760 tcctatttacaataaacaattgattttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaa 4698661  T
Q  215 aaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||| |||| | | |||| |||| ||||  ||||| ||||||    
T  4698660 aaattcaattgtttcttgtaaaaaggatcagagggagtatt 4698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 7350242 - 7350184
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||    
T  7350242 attattcaatgtatctaaaatgtcaactttctcttataaataggaccagaggaagtatt 7350184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 54612002 - 54612098
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||||||||||||||||||||||||||||||         ||| ||| ||| |||||||||||||||||| |||||  |||||||| ||||    
T  54612002 aatttactttttagatacattaaataatttatgtatttgg---------ttg-ctaaatacatacattattcaatgtatttaaaaggtcaactttctctt 54612091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 30192036 - 30191893
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||| |||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| | ||| ||  |||| |||||| |||    
T  30192036 cggtcgtatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatc 30191937  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||||||||||| ||| ||||||||||||||||||| | ||||||    
T  30191936 taaaaaatcaattttttcttataaataggactagacggagtatt 30191893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 2643612 - 2643670
Alignment:
Q  108 cattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 166  Q
    |||||||||||||||| ||||| ||||| ||||||||| | |||| |||||||||||||    
T  2643612 cattcggtcctatttataagaaataattgactttttagtttcattgaataatttatgta 2643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 43413681 - 43413584
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 210  Q
    |||| |||||||||||||  |||| | |||||||||| |||  ||| ||||||||| |||| ||| ||| |||||| ||| ||||||||||||||||||    
T  43413681 cggttctatttacaagaaacaattgattttttagatatattggata-tttatgtatctggtttagattcatgactacatacatacattattcaatgtat 43413584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 31227413 - 31227356
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  31227413 ttcggtcctatttacaagagaaagttgactttttagatacattaaataatgtatgtat 31227356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 242
Target Start/End: Original strand, 55190676 - 55190804
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    |||||||| || |||||  |||||||||||| ||| || |  |||||| ||||||||||| ||  |||| | ||||||| ||  |||||| |||| || |    
T  55190676 ggtcctatatataagaaacaatttacttttttgattcagtggataattgatgtatttggtctat-ttctaggctagatacatcaattattgaatgaatat 55190774  T
Q  213 aaaaaatcaactttatcttataaataggac 242  Q
    |||||||||| ||| |||||||||||||||    
T  55190775 aaaaaatcaattttttcttataaataggac 55190804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 6246748 - 6246688
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| ||||||||||||    
T  6246748 cggtcctatttacaagagaaagttgactttttagatacattcaataatatatgtatttggt 6246688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 21554201 - 21554245
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  21554201 attactcaatgaatctaaaaaatcaactttttcttataaatagga 21554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 53225784 - 53225724
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    |||||||||||| |||||  |||| ||||||||||| |||| ||||||| |||||||||||    
T  53225784 cggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggt 53225724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 14785009 - 14785084
Alignment:
Q  97 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    ||||| |||||| | || ||||||||||| ||| ||||| |||||| ||||||||| ||||||||| |||| ||||    
T  14785009 aaaaaatacttcctccgatcctatttacaggaaataattgacttttcagatacattgaataatttaagtatatggt 14785084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 3043911 - 3043802
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    |||||| ||||| ||| |||| |||| || ||||||||||| ||  || | |||||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  3043911 aatttatttttttgattcattgaatagttgatgtatttggtctatttt-tagactaggtacatcaattattgaatgaatctaaaaaattaactttttctt 3043813  T
Q  232 ataaataggac 242  Q
    |||||||||||    
T  3043812 ataaataggac 3043802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 20745360 - 20745469
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    |||||||||||| ||| |||| |||| || ||||||||| | ||  |||| | |||| || ||  |||||| |||| ||||||||||| |||||| ||||    
T  20745360 aatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggctaggtacatcaattattgaatgaatctaaaaaattaactttttctt 20745458  T
Q  232 ataaataggac 242  Q
    |||||||||||    
T  20745459 ataaataggac 20745469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 31240974 - 31240876
Alignment:
Q  120 tttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 218  Q
    ||||||||||  |||| |||||||| ||||||| ||||| |||||||||| || ||| || |  || ||||| ||| |||||||||  |||||||||||    
T  31240974 tttacaagaaacaattaactttttaaatacattgaataaattatgtatttagtttagattttaaaccagatacataaattattcaaaatatctaaaaaa 31240876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 29833273 - 29833330
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 169  Q
    |||||||||||||||||   |||| |||||||||||||||| || ||| |||||||||    
T  29833273 cggtcctatttacaagataaaattgactttttagatacattgaagaatatatgtattt 29833330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 29834598 - 29834554
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataat 159  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||    
T  29834598 gtcctatttacaagaaa-aatttactttctagatacattaaataat 29834554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 45828508 - 45828553
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||| |||||| |||||||||||||| ||| |||||||||||||||    
T  45828508 attactcaatgaatctaaaaaatcaattttttcttataaataggac 45828553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 255
Target Start/End: Complemental strand, 48361190 - 48361049
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| | ||| ||  |||| |||||| |||||    
T  48361190 gtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatcta 48361091  T
Q  214 aaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||| |||| ||| |||||||||||||||  |||| ||||||    
T  48361090 aaaagtcaaatttttcttataaataggaccggagggagtatt 48361049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 53225737 - 53225782
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||    
T  53225737 attattcaatgaatctaaaaagtcaattttttcttataaataggac 53225782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 16412289 - 16412233
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||| ||  |||||||||    
T  16412289 attattcaatgaatctaaaaagtcaattttttcttataaatagaaccggaggaagta 16412233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 31854378 - 31854442
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||| |||||||| ||||||||   | || |||||||||||||||| |||||| |||||||    
T  31854378 tacttcatccggtcctaattacaagagaaagttgactttttagatacattgaataatgtatgtat 31854442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 387
Target Start/End: Complemental strand, 43038776 - 43038712
Alignment:
Q  323 ctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 387  Q
    |||||||| |||||||||| |||| | |||||||||||||| ||| || |||| |||||| ||||    
T  43038776 ctaatggtcagaaatcttgatccagtatggaccaatacatctatgagtccatgctaaacgacacc 43038712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 55466147 - 55466115
Alignment:
Q  137 actttttagatacattaaataatttatgtattt 169  Q
    |||||||||||| ||||||||||||||||||||    
T  55466147 actttttagatatattaaataatttatgtattt 55466115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 5e-54; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 28359220 - 28359081
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  28359220 tacttcatccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggttttggttcttgactagatacatatattatt 28359121  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  28359120 caatgtatctaaaaaatcaactttctcttataaataggac 28359081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 2352317 - 2352447
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2352317 cggtcctatttacaagagacaatttactttttagatatattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2352416  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||| | |||| ||||||||||    
T  2352417 taaaaagtcaactgtctcttgtaaataggac 2352447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 14281598 - 14281728
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  14281598 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 14281697  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||| | |||| ||||||||||    
T  14281698 taaaaagtcaactgtctcttgtaaataggac 14281728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 2961243 - 2961114
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  2961243 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 2961144  T
Q  213 aaaaaatcaactttatcttataaataggac 242  Q
    ||||| |||||||| |||| ||||||||||    
T  2961143 aaaaagtcaactttctcttgtaaataggac 2961114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 101 - 238
Target Start/End: Original strand, 28989269 - 28989406
Alignment:
Q  101 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 200  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||    
T  28989269 attactcccttcggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttagattcttgactagatacgtacatta 28989368  T
Q  201 ttcaatgtatctaaaaaatcaactttatcttataaata 238  Q
    |||||||||||||| || |||||||| |||| ||||||    
T  28989369 ttcaatgtatctaataagtcaactttctcttgtaaata 28989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 113 - 253
Target Start/End: Complemental strand, 10380529 - 10380389
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |||||||||    
T  10380529 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 10380430  T
Q  213 aaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    ||||| |||| ||| |||| ||||||||||  |||||||||    
T  10380429 aaaaagtcaattttctcttgtaaataggaccggaggaagta 10380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 10065392 - 10065265
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||    
T  10065392 tcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgacgagatacatacattattcaatgtatctaa 10065293  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    |||||||| ||| |||| ||||||||||    
T  10065292 aaaatcaattttctcttgtaaataggac 10065265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 29312438 - 29312589
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||||    
T  29312438 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacgtacattatt 29312537  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    |||||||| |||||| |||||||| | || ||||||||||  ||||||||||    
T  29312538 caatgtatttaaaaagtcaactttctgttgtaaataggaccggaggaagtat 29312589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 45536303 - 45536177
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  45536303 cggtcctatttacaagagataatttactttttagatacatcaaataatttatgtatttggtttaggttcttgacttgataaatacattattgaatgtatc 45536204  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    |||||| |||| ||| |||| ||||||    
T  45536203 taaaaagtcaattttctcttgtaaata 45536177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 9548671 - 9548810
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| | ||||| ||    
T  9548671 tacttcctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgattagatacacacattctt 9548770  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  9548771 caatgtatctaaaaagtcaattttctcttgtaaataggac 9548810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 9302059 - 9301929
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  9302059 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatc 9301960  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| | |||| | |||| ||||||||||    
T  9301959 taaaaagttaactgtctcttgtaaataggac 9301929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 38830491 - 38830621
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||     
T  38830491 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatt 38830590  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||| | |||| ||||||||||    
T  38830591 taaaaagtcaactgtctcttgtaaataggac 38830621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 26545025 - 26545146
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  26545025 aatttactttttagattcattaaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctctt 26545124  T
Q  232 ataaataggactagaggaagta 253  Q
     |||||| |||  |||||||||    
T  26545125 gtaaataagaccggaggaagta 26545146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 115 - 239
Target Start/End: Complemental strand, 24595055 - 24594932
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| |||||||| ||||||    
T  24595055 tcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacataattcaatg-atctaa 24594957  T
Q  215 aaaatcaactttatcttataaatag 239  Q
    ||| |||||||||| ||||||||||    
T  24594956 aaagtcaactttattttataaatag 24594932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 119 - 242
Target Start/End: Original strand, 6784674 - 6784797
Alignment:
Q  119 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 218  Q
    ||||||| |||  |||||||||||||||||||||||||||||||| |||||| |  |||||||||| |||||| ||||||||||||||||||||||||||    
T  6784674 atttacaggaaacaatttactttttagatacattaaataatttatatatttgattcaggttcttgattagatacatacattattcaatgtatctaaaaaa 6784773  T
Q  219 tcaactttatcttataaataggac 242  Q
    |||||||| | |||||||||||||    
T  6784774 tcaactttctattataaataggac 6784797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 23398088 - 23398198
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   || |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  23398088 cggtcctatttacaagagacaacttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 23398187  T
Q  212 taaaaaatcaa 222  Q
    |||||| ||||    
T  23398188 taaaaagtcaa 23398198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 26550407 - 26550285
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  26550407 aatttactttttagaaacattaaataatttatgtatttgctttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaactttctctt 26550308  T
Q  232 ataaataggactagaggaagtat 254  Q
     |||||||||   ||||||||||    
T  26550307 gtaaataggatcggaggaagtat 26550285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 118 - 242
Target Start/End: Original strand, 33325347 - 33325471
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||||||||||   |||||| ||||||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||||||||||||||||||||||    
T  33325347 tatttacaagagacaatttattttttagatacattaaataatttatgtatctggtttagatttttgactagatacatacattattcaatgtatctaaaaa 33325446  T
Q  218 atcaactttatcttataaataggac 242  Q
     |||||||| |||| ||||||||||    
T  33325447 gtcaactttttcttgtaaataggac 33325471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 1674109 - 1673982
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| ||||||||||     
T  1674109 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattatttaatgtatctag 1674010  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    ||| |||||||| |||| ||||||||||    
T  1674009 aaagtcaactttctcttgtaaataggac 1673982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 40161307 - 40161187
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||||||| ||||||    
T  40161307 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaatgtatttaaaaa 40161208  T
Q  218 atcaactttatcttataaata 238  Q
     |||| ||| |||| ||||||    
T  40161207 gtcaattttctcttgtaaata 40161187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 26733793 - 26733923
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||| ||  |||||||||||||| ||| |||||| | | ||||    
T  26733793 cggtcctatttacaagaaacaattaactttttagatacattaaataatctatgtatttggtttatattcttgactagatacataaattatttattttatc 26733892  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    || ||| |||||||| |||||||||||||||    
T  26733893 tataaagtcaactttctcttataaataggac 26733923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 30264923 - 30264785
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | ||||||||||||||| ||  |  |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||| ||| ||||||    
T  30264923 tacttcctccggtcctatttacaataaacatgttactttttagatatattaaataatttatatatttggtttaggttcttgactagatacatatattatt 30264824  T
Q  203 caatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    ||||||||| || ||||||||||| |||  |||||||||    
T  30264823 caatgtatccaacaaatcaactttctctcgtaaatagga 30264785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 7796239 - 7796100
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | ||||| ||||||||||    |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||    
T  7796239 tacttcctccggtcatatttacaagtgacaatttattttttagatacattaaataatttatgtatttggtttagattcttgactaaatacatacattatt 7796140  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||||||||||||||  | | ||| |||| ||||||||||    
T  7796139 caatgtatctaaaaagactattttctcttgtaaataggac 7796100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 15289808 - 15289907
Alignment:
Q  139 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 238  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||||| || ||||||||||||||||||||||||| |||||||| |||| ||||||    
T  15289808 tttttagatacattaaataatttatatatttggtttaggttattgactaggtacatacattattcaatgtatctaaaaagtcaactttctcttgtaaata 15289907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 34718899 - 34718988
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 201  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||| || |||||||||||  ||||||||    
T  34718899 cggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagatttttgactagatacgtacattat 34718988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 23537458 - 23537381
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataa 192  Q
    ||||||||||||||   |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  23537458 tcctatttacaagagacaatttattttttagataaattaaataatttatgtatttggtttaggttcttgactaaataa 23537381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 46320286 - 46320171
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||     || ||||||||||| ||| |||||||||   ||||||    
T  46320286 tcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt-----ttattgactagatacatatattattcaa---atctaa 46320195  T
Q  215 aaaatcaactttatcttataaata 238  Q
    ||| ||||| || |||||||||||    
T  46320194 aaagtcaaccttctcttataaata 46320171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 24463324 - 24463411
Alignment:
Q  139 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaacttt 226  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||  | ||| |||||||||| |||| || |||||||||||||||    
T  24463324 tttttagatatattaaataatttatatatttggtttatgttcttgatcaaatacatacattattgaatgaatttaaaaaatcaacttt 24463411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 92 - 242
Target Start/End: Original strand, 43929334 - 43929483
Alignment:
Q  92 aaataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagata 191  Q
    ||||||||| ||||| | | ||||||||| || |||||  |||||||||||| ||| ||||||||| || ||||||||||| ||  ||||   |||| ||    
T  43929334 aaataaaaagttactccctccggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggtcta-tttctaagctaggta 43929432  T
Q  192 aatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
     ||  |||||| |||| ||||||||| | |||||| |||||||||||||||    
T  43929433 catcaattattgaatgaatctaaaaagttaactttttcttataaataggac 43929483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 49944973 - 49944843
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  | || | ||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||||||||| |||    
T  49944973 cggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatc 49944874  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| | || ||| |||||||||||||||    
T  49944873 taaaaagttaaatttttcttataaataggac 49944843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 50155391 - 50155449
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||||||||||    
T  50155391 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagtatt 50155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 10380389 - 10380453
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||| | |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  10380389 tacttcctccggtcctatttacaagagaaaattgactttttagatacattcaataatgtatgtat 10380453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 29256691 - 29256747
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||||||||    
T  29256691 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggaagta 29256747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 1673978 - 1674037
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 169  Q
    |||||||||||||||||||   | || ||||| ||||||||||||||||| |||||||||    
T  1673978 ttcggtcctatttacaagagaaagttgactttctagatacattaaataatatatgtattt 1674037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 9301927 - 9301982
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||   | || ||||||||||||||||||||||| |||||||    
T  9301927 cggtcctatttacaagagacagttaactttttagatacattaaataatgtatgtat 9301982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 33325473 - 33325418
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    ||||||||||||||||||  | || |||||||||||||||| |||||| |||||||    
T  33325473 cggtcctatttacaagaaaaagttgactttttagatacattgaataatgtatgtat 33325418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 253
Target Start/End: Original strand, 38040282 - 38040425
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    |||||||||||||| |||||  | || ||||||| ||| ||||  |||| | || |||||| | ||  |||| ||| ||||| ||  |||| |||||| |    
T  38040282 ttcggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaa 38040381  T
Q  210 tctaaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||||||| |||| ||| |||||||||||||||  |||||||||    
T  38040382 tctaaaaagtcaaatttttcttataaataggaccggaggaagta 38040425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 44939074 - 44939200
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| |||||  | || |||||||  || ||||  |||| | ||||||||||| ||  |||| || |||||| ||  |||| |||||| |||    
T  44939074 cggtcctatttataagaaacatttgactttttttattcattgtataaatgatgtatttggtctatattctagattagatacatcaattactcaatgaatc 44939173  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    ||||||||||| ||| |||||||||||    
T  44939174 taaaaaatcaattttctcttataaata 44939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 25021380 - 25021316
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||| |||| |||||||||||||  |||| |||||||||||  ||| ||||||| ||||||    
T  25021380 tacttcatccggttctatttacaagaaacaattgactttttagatttattgaataattgatgtat 25021316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 27423048 - 27422992
Alignment:
Q  111 tcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    ||||||| ||||| || ||| |||| |||||||| ||||||| ||||||||||||||    
T  27423048 tcggtcccatttataaaaatcaattgactttttaaatacattgaataatttatgtat 27422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 29892270 - 29892149
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| | |||  |||| ||||||||||| |||| ||||||| || ||| |||| ||| || | |||  |||| ||| |||||||||  ||||    
T  29892270 cggtcctatttataggaaacaattgactttttagattcattcaataattgatatatctggtttagattttagaccggatacataaattattcaa--tatc 29892173  T
Q  212 taaaaaatcaactttatcttataa 235  Q
    |||||| |||||| | ||||||||    
T  29892172 taaaaagtcaactgtttcttataa 29892149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 34146897 - 34146941
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    ||||||||||| ||| |||||||||| ||| ||||||||||||||    
T  34146897 attattcaatgaatcaaaaaaatcaattttttcttataaatagga 34146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 390945 - 390815
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  390945 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 390846  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||||||||||||||||||||||| ||||    
T  390845 taaaaaatcaactttatcttataaattggac 390815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 766567 - 766425
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||    
T  766567 cggtcctatttacaagagataatttattttttagatacattaaataatttatgtatttggtttaggttattgactaaatacatacattattcaatgtatc 766468  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    ||||||||| ||||| ||||||||||||||   ||||||||||    
T  766467 taaaaaatcgactttctcttataaataggatcggaggaagtat 766425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 110 - 255
Target Start/End: Original strand, 7405450 - 7405595
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7405450 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 7405549  T
Q  210 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  7405550 tctaaaaagtcaattttctcttgtaaataagaccggagggagtatt 7405595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 885739 - 885612
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  885739 tcctatttacaagagagaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaa 885640  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    ||| |||||| | |||| ||||||||||    
T  885639 aaagtcaactgtctcttgtaaataggac 885612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 24949771 - 24949628
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  24949771 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatc 24949672  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||| ||| |||| ||||||||||  |||| ||||||    
T  24949671 taaaaagtcaattttctcttgtaaataggaccggagggagtatt 24949628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 31971170 - 31971027
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31971170 cggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 31971071  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||||||| |||| |||||| |||  |||| ||||||    
T  31971070 taaaaagtcaactttctcttgtaaataagaccggagggagtatt 31971027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 6801700 - 6801564
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  6801700 tacttcatccagtcctatttacaagaaacaatttactttttagatacattaaataattcatgtatttggtttaggttcttgactagatacatacattatt 6801601  T
Q  203 caatgtatctaaaaaatcaactttatcttataaatag 239  Q
    ||||||||||||||| | ||| ||||  |||||||||    
T  6801600 caatgtatctaaaaagttaaccttattatataaatag 6801564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 6047936 - 6047806
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  6047936 cggtcatatttacaagagataatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 6047837  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| | |||||| | || ||||||||||    
T  6047836 taaaaagttaactttctgttgtaaataggac 6047806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 110 - 255
Target Start/End: Original strand, 33859496 - 33859641
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    ||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||    
T  33859496 ttcggtcctatttacaatagacaatttactttttagatacattaaataatttatgtatttggtttagtttcttgactagatacatacattattcgatgta 33859595  T
Q  210 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||||| | |||||| |||| ||||||||||  |||| ||||||    
T  33859596 tctaaaaagttaactttctcttgtaaataggaccggagggagtatt 33859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 17225380 - 17225269
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  17225380 tcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacattattcaatgtatctaa 17225281  T
Q  215 aaaatcaacttt 226  Q
    ||| ||||||||    
T  17225280 aaagtcaacttt 17225269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 110 - 253
Target Start/End: Complemental strand, 34639182 - 34639039
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    |||||||||||||| ||||   ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||  |||||    
T  34639182 ttcggtcctatttataagagacaatttactttttagatacattgaaaaatttatgtatttggtttaggttcttgactagatacatacattattgcatgta 34639083  T
Q  210 tctaaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||||||| |||||| | |||| ||||||||||| |||||||||    
T  34639082 tctaaaaagtcaactgtctcttgtaaataggactggaggaagta 34639039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 6045821 - 6045691
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||| ||| |||||||||||||||    
T  6045821 cggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttagattcttgactagatacatagattattcaatgtatc 6045722  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||  |||||||| |||||||||||||||    
T  6045721 taaaaggtcaactttctcttataaataggac 6045691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 96 - 254
Target Start/End: Complemental strand, 8559069 - 8558912
Alignment:
Q  96 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 195  Q
    ||||||||||| | | || || |||||||||||   |||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||    
T  8559069 aaaaaattactccctccgatcttatttacaagagacaatttattttttagatacat-aaataatttatgtatttggtttaggttcttaactagatacata 8558971  T
Q  196 cattattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    |||||||||||||||||||||| |||| ||| |||| ||||||||||| |||| |||||    
T  8558970 cattattcaatgtatctaaaaagtcaattttctcttgtaaataggactggagggagtat 8558912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 30686554 - 30686679
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||| ||    
T  30686554 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttcgtttaggtttttgactagatacatacattattcaatgtattta 30686653  T
Q  214 aaaaatcaactttatcttataaatag 239  Q
    |||| |||| ||| |||| |||||||    
T  30686654 aaaagtcaattttctcttgtaaatag 30686679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 13144344 - 13144220
Alignment:
Q  117 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    ||||||||||||  ||  ||||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||| ||| |||||||||||||    
T  13144344 ctatttacaagagatagattactttttagatacattaaataatttatgtattttgtttaggttcttgacttgatacatacataattgaatgtatctaaaa 13144245  T
Q  217 aatcaactttatcttataaatagga 241  Q
    | |||||||||| || |||||||||    
T  13144244 agtcaactttattttgtaaatagga 13144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 14931266 - 14931371
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||| ||     |||| |||||||||||||||||||    
T  14931266 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttttt-----gatacatacattattcaatgtatc 14931360  T
Q  212 taaaaaatcaa 222  Q
    |||||| ||||    
T  14931361 taaaaagtcaa 14931371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 112 - 199
Target Start/End: Original strand, 22898861 - 22898948
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatt 199  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||| |||||||    
T  22898861 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttgactatatacatacatt 22898948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 36429 - 36351
Alignment:
Q  139 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||||||||| ||||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||| ||||||||||    
T  36429 tttttagatatattaaataatttatgtatttggtttagatttttgactagatatataaattattcaatatatctaaaaa 36351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 22880926 - 22881012
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacat 198  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||||| ||||| || |||||||||||||| ||| ||||||    
T  22880926 cggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttagtttaggttcttgactatatacatacat 22881012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 1158383 - 1158325
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    |||||||||||||||| ||||| |||||||| ||||||| ||||||| |||||||||||    
T  1158383 gtcctatttacaagaaataattgactttttaaatacattgaataattgatgtatttggt 1158325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 2810218 - 2810089
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||| || ||||| |||||||||||||  || |||| |||| || ||||||||||  ||  |||| |||||| || ||  |||||| |||| |||    
T  2810218 cggtcctatatataagaaataatttacttttttcattcattgaatagttgatgtatttggactat-ttctagactaggtacatcaattattgaatgaatc 2810120  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||||| |||||| | |||||||||||||    
T  2810119 taaaaaattaacttttttttataaataggac 2810089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 254
Target Start/End: Original strand, 5483867 - 5484011
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    ||||||||||||||||| || || || |||||||| ||  ||||||||||| |||||||| || ||  || | ||||| ||| ||  ||||||||| | |    
T  5483867 ttcggtcctatttacaataaatatttgactttttaaatttattaaataattgatgtattttgtctatattttagactaaatacattaattattcaacgaa 5483966  T
Q  210 tctaaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    |||||||| |||| | | ||||  ||||||||  |||||||||||    
T  5483967 tctaaaaagtcaattgtttcttgcaaataggagcagaggaagtat 5484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 28630891 - 28630763
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||| |||||  |||| ||||||||||| ||||  |||| ||||||||||||| ||  || | ||| ||||| ||  |||| |||||| ||  |    
T  28630891 gtcctatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaa 28630792  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    |||| |||| ||| |||||||||||||||    
T  28630791 aaaagtcaaatttttcttataaataggac 28630763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 24949639 - 24949694
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  24949639 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 24949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 1158278 - 1158383
Alignment:
Q  137 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaa 236  Q
    ||||||||||| |||| ||||||| ||||||| ||| ||  |||| ||| | ||| ||  |||||||||||||| |||||| |||| | | |||| ||||    
T  1158278 actttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaagtcaattatttcttgtaaa 1158377  T
Q  237 taggac 242  Q
    ||||||    
T  1158378 taggac 1158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 8558924 - 8558977
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  8558924 gtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 8558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 28863410 - 28863337
Alignment:
Q  162 atgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataa 235  Q
    ||||||||||| ||  |||| ||| ||||| ||| ||||| ||||| | |||||||||||| ||||||||||||    
T  28863410 atgtatttggtttatattctagacaagatacataaattatacaatgaaactaaaaaatcaattttatcttataa 28863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 2943382 - 2943322
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    ||||||||| || |||||  |||||||||||| ||| ||||||||| || |||||||||||    
T  2943382 cggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggt 2943322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 492443 - 492315
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  492443 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 492344  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||| |||||||||||||||    
T  492343 aaaaatcaactttctcttataaataggac 492315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 42263608 - 42263480
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  42263608 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatcta 42263509  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||| |||||||||||||||    
T  42263508 aaaaatcaactttctcttataaataggac 42263480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 29866090 - 29866233
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |    
T  29866090 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtacc 29866189  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| ||||||||||||| ||||||||||  |||| ||||||    
T  29866190 taaaaagtcaactttatcttgtaaataggaccggagggagtatt 29866233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 13775719 - 13775862
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||    
T  13775719 cggtcctatttacaagagataatttactttttagatatattaaataatttatgtatttggtttaggtttttgactagatacatacattatttaatgtatc 13775818  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||||||| |||||||||||||||  |||| ||||||    
T  13775819 taaaaagtcaactttctcttataaataggaccggagggagtatt 13775862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 32880906 - 32881042
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    ||||||||||| ||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||    
T  32880906 tacttcattcgatcctatttacaagagacaatttactttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatatattatt 32881005  T
Q  203 caatgtatctaaaaaatcaactttatcttataaatag 239  Q
    |||| |||||||||| ||||||||||||| |||||||    
T  32881006 caatatatctaaaaagtcaactttatcttgtaaatag 32881042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 43658063 - 43657939
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  43658063 gtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggtttttgactagatacatacattattcaatgtatcta 43657964  T
Q  214 aaaaatcaactttatcttataaata 238  Q
    |||| |||||||| |||| ||||||    
T  43657963 aaaagtcaactttctcttgtaaata 43657939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 32197387 - 32197514
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||| |||  |||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  32197387 tcctatttacatgaaacaatttattttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatctaa 32197486  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    |||||||||||| |||| ||||||||||    
T  32197487 aaaatcaactttctcttgtaaataggac 32197514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 16241407 - 16241277
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  16241407 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 16241308  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||| | |||| ||||||||||    
T  16241307 taaaaagtcaactgtctcttgtaaataggac 16241277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 41260033 - 41260175
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  41260033 cggtcctatttacaagagacaatttacttttttgatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 41260132  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    |||||| || ||||| |||| ||||||||||  ||||||||||    
T  41260133 taaaaagtcgactttctcttgtaaataggaccggaggaagtat 41260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 20427009 - 20427150
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  20427009 cggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 20427108  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||||| |||| ||| ||||||||||| ||| ||||| ||||    
T  20427109 taaaaagtcaattttctcttataaataagaccagagggagta 20427150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 25892084 - 25891955
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  25892084 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatttatc 25891985  T
Q  212 taaaaaatcaactttatcttataaatagga 241  Q
    |||||| |||||| | ||||||||||||||    
T  25891984 taaaaagtcaactgtctcttataaatagga 25891955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 40430806 - 40430677
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40430806 cggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatc 40430707  T
Q  212 taaaaaatcaactttatcttataaatagga 241  Q
    |||||| |||| ||| ||||||||||||||    
T  40430706 taaaaagtcaattttctcttataaatagga 40430677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 6761473 - 6761603
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  6761473 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatc 6761572  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||| | |||| ||||||||||    
T  6761573 taaaaagtcaactgtctcttgtaaataggac 6761603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 7765933 - 7765791
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    ||||||||||| ||||   ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||||    
T  7765933 ggtcctatttataagagacaatttactttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaatgtatct 7765834  T
Q  213 aaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||||| |||||||| |||| ||||||||||  |||| ||||||    
T  7765833 aaaaagtcaactttctcttgtaaataggaccggagggagtatt 7765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 2100025 - 2100154
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2100025 cggtcctatttacaagagacatgttattttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 2100124  T
Q  212 taaaaaatcaactttatcttataaatagga 241  Q
    |||||| |||||||| | ||||||||||||    
T  2100125 taaaaagtcaactttcttttataaatagga 2100154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 117 - 238
Target Start/End: Complemental strand, 11363133 - 11363012
Alignment:
Q  117 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  11363133 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatagatacattattcaatgcatctaaaa 11363034  T
Q  217 aatcaactttatcttataaata 238  Q
    | |||||||| |||| ||||||    
T  11363033 agtcaactttctcttgtaaata 11363012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 117 - 243
Target Start/End: Complemental strand, 45065715 - 45065589
Alignment:
Q  117 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||||||||  | ||| |||| ||||||||| ||||||||||||||||||||||||    
T  45065715 ctatttacaagagacaatttactttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaatgtatctaaaa 45065616  T
Q  217 aatcaactttatcttataaataggact 243  Q
    | |||||||| | ||||||||||||||    
T  45065615 agtcaactttcttttataaataggact 45065589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 32750459 - 32750338
Alignment:
Q  135 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttata 234  Q
    ||||||||||||||||||| |||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||| |||||||| |||| ||    
T  32750459 ttactttttagatacattacataatttatgtatttgatttagattcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttgta 32750360  T
Q  235 aataggactagaggaagtattc 256  Q
    ||||||||  |||| |||||||    
T  32750359 aataggaccggagggagtattc 32750338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 1944668 - 1944532
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||||||||||   || ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  1944668 tatttacaagagacaagttactttttagatacattaaataatatatgaatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaa 1944569  T
Q  218 atcaactttatcttataaataggactagaggaagtat 254  Q
     |||||||| | || |||||||||  ||||| |||||    
T  1944568 gtcaactttcttttgtaaataggatcagagggagtat 1944532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 42341646 - 42341769
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||| ||||||||||| ||| ||||    
T  42341646 aatttactttttaaatacattaaataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatttaaaaaatcaattttctctt 42341745  T
Q  232 ataaataggactagaggaagtatt 255  Q
     ||||||||||  || ||||||||    
T  42341746 gtaaataggaccggatgaagtatt 42341769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 44737422 - 44737280
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||    
T  44737422 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggt-tagattcttaactagatacatacattattcaatgtatc 44737324  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  44737323 taaaaagtcaattttctcttgtaaataagaccggagggagtatt 44737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 11711464 - 11711354
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||    
T  11711464 cggtcctatttacaagagacaatttacttttaagatacattaaataatttatgtatttgacttaggttcttgactagatacatacattattcaatgtatc 11711365  T
Q  212 taaaaaatcaa 222  Q
    |||||| ||||    
T  11711364 taaaaagtcaa 11711354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 3264935 - 3265053
Alignment:
Q  117 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    ||||||||||||   ||||||||||||||||||||||||||||||||    ||||| || ||||||||||| ||| ||||||||||||||||||||||||    
T  3264935 ctatttacaagagacaatttactttttagatacattaaataatttat----ttggtttaagttcttgactaaatacatacattattcaatgtatctaaaa 3265030  T
Q  217 aatcaactttatcttataaatag 239  Q
    ||||||| |||||||||||||||    
T  3265031 aatcaacattatcttataaatag 3265053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 38598464 - 38598605
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||| |||||||||||   ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||    
T  38598464 cggtcttatttacaagagacaatttactttttatatatattaaataatttatgtatttggtttaggttcttgaccagatacatatattattcaatgtatc 38598563  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||||| | |||||| | || ||||||||||  |||||||||    
T  38598564 taaaaagtaaactttcttttgtaaataggaccggaggaagta 38598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 18452579 - 18452706
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||| ||    
T  18452579 gtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattattcaatatat-ta 18452677  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    |||| |||||| | |||| ||||||||||    
T  18452678 aaaagtcaactgtctcttgtaaataggac 18452706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 4740718 - 4740844
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  |||| |||||||| ||| |||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||     
T  4740718 cggtcctatttacaagaaacaattaactttttatatatattaaataatttatatatttggtataggttcttgattagatacatacattattcaatgtatt 4740817  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    |||||| | |||||| |||| ||||||    
T  4740818 taaaaagttaactttctcttgtaaata 4740844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 41205629 - 41205504
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    ||||||||||| ||||  ||||| | |||||||||| ||||||||||||||||||||||| ||  || || |||||||| ||| |||||||||| |||||    
T  41205629 ggtcctatttataagagataattaattttttagatatattaaataatttatgtatttggtttatattttttactagatacataaattattcaatatatct 41205530  T
Q  213 aaaaaatcaactttatcttataaata 238  Q
    |||||||||||||| |||||||||||    
T  41205529 aaaaaatcaactttctcttataaata 41205504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 30864809 - 30864717
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtat 210  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||    
T  30864809 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgtat 30864717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 33913188 - 33913288
Alignment:
Q  141 tttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatagg 240  Q
    |||||||| ||||||||||||||||||||||| ||| |||| ||||||||| |||| ||||| ||| ||| ||||||||||||||||| || ||||||||    
T  33913188 tttagatatattaaataatttatgtatttggtttagattctcgactagatacatacgttatttaatatatttaaaaaatcaactttatattgtaaatagg 33913287  T
Q  241 a 241  Q
    |    
T  33913288 a 33913288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 20360515 - 20360579
Alignment:
Q  175 aggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatag 239  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||    
T  20360515 aggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttataaatag 20360579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 39377980 - 39377911
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    |||||| | |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||    
T  39377980 tacttcttccggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt 39377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 39377844 - 39377904
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||    
T  39377844 cggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt 39377904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 42470982 - 42470922
Alignment:
Q  181 ttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  42470982 ttgactagatatatacattattcaatgtatctacaaaatcaactttcttttataaatagga 42470922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 22857917 - 22857834
Alignment:
Q  139 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaa 222  Q
    |||||||||||| | ||||||||||||||||||| ||| |||| ||  ||||| ||| ||||||||||||||||||||| ||||    
T  22857917 tttttagatacaatgaataatttatgtatttggtttagattctagatcagatacataaattattcaatgtatctaaaaagtcaa 22857834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 3037874 - 3037758
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacat--ta 200  Q
    |||||||||||||||||| ||||||||  || | | ||||||||| |||| ||||||||||||||||||||||  |||| |||  |||| ||  ||  ||    
T  3037874 tacttcattcggtcctatatacaagaaacaaatgattttttagattcattgaataatttatgtatttggtgtatattctagaccggatacatcaattata 3037775  T
Q  201 ttcaatgtatctaaaaa 217  Q
    |||||||||||||||||    
T  3037774 ttcaatgtatctaaaaa 3037758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 20555361 - 20555268
Alignment:
Q  149 cattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||| |||| | ||||||||||| ||  |||| ||| ||||| ||  ||||||||||||||||||||||| || ||| |||||||||||||||    
T  20555361 cattacataaataatgtatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaattaattttttcttataaataggac 20555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 44736918 - 44736813
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    |||||| ||||||||||  |||| ||||||||||||| ||| |||| ||||||||||||  ||| |||| | ||||||  ||| |||| ||||| |||||    
T  44736918 ggtcctttttacaagaaacaattgactttttagatacgttagataaattatgtatttggcttagattctagtctagatgcataaattaatcaatatatct 44736819  T
Q  213 aaaaaa 218  Q
    ||||||    
T  44736818 aaaaaa 44736813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 38983007 - 38983143
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| || || || || ||||||| ||| ||||  |||| | |||||||| || ||  |||| ||| ||||| ||  ||||  ||||| |||    
T  38983007 cggtcctatttataaaaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattctagacaagatacatcaattacacaatgaatc 38983106  T
Q  212 taaaaaatcaactttatcttataaataggactagagg 248  Q
    ||||||||||||||| | |||||||||||||||||||    
T  38983107 taaaaaatcaacttttttttataaataggactagagg 38983143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 4063411 - 4063269
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || |||||||| || ||  |||| || ||| || ||  |||||| |||| |||    
T  4063411 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtattttgtctat-ttctagagtaggtacatcaattattgaatgaatc 4063313  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||||| |||||| |||||||||||| || ||||| ||||||    
T  4063312 taaaaaattaactttttcttataaatagaaccagaggtagtatt 4063269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 12486131 - 12486072
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    |||||||||||||||||  |||| ||||||||||| |||| ||||||| |||||||||||    
T  12486131 ggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggt 12486072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 9152387 - 9152497
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  | || ||||||| ||  |||||||||||| ||||||||||| ||  || | ||||||||| ||  |||| |||||| |||    
T  9152387 cggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattactcaatgaatc 9152486  T
Q  212 taaaaaatcaa 222  Q
    |||||| ||||    
T  9152487 taaaaagtcaa 9152497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 34447602 - 34447652
Alignment:
Q  203 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||| ||||    
T  34447602 caatgaatctaaaaaatcaactttttcttataaataggaccagagggagta 34447652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 258
Target Start/End: Complemental strand, 45034537 - 45034392
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| |  ||| || ||  |||||| |||| |||    
T  45034537 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatc 45034439  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtattcta 258  Q
    |||||| | |||||| |||||||||||||||  |||| |||||||||    
T  45034438 taaaaagttaactttttcttataaataggaccggaggtagtattcta 45034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 22857822 - 22857917
Alignment:
Q  122 tacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    ||||||||  |||| |||||||||||||||| |||||||||||||| || | |||  |||  || | ||| ||| |||||||| ||||||||||||    
T  22857822 tacaagaaacaattgactttttagatacattgaataatttatgtatctgatctagaatctaaaccaaatacataaattattcattgtatctaaaaa 22857917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 27596764 - 27596729
Alignment:
Q  137 actttttagatacattaaataatttatgtatttggt 172  Q
    |||||||||||||||| |||||||||||||||||||    
T  27596764 actttttagatacattgaataatttatgtatttggt 27596729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 27182089 - 27182143
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    ||||||||||||  |||| | |||| ||||||||| |||||||||||||||||||    
T  27182089 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggt 27182143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 27831631 - 27831685
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    ||||||||||||  |||| | |||| ||||||||| |||||||||||||||||||    
T  27831631 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggt 27831685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 38598606 - 38598536
Alignment:
Q  102 ttacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    ||||||| | ||||||||||||||| |   | ||||||||||||||||||| |||||| ||||||| ||||    
T  38598606 ttacttcctccggtcctatttacaaaagaaagtttactttttagatacattgaataatatatgtatctggt 38598536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 41205583 - 41205641
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| ||| |||||||||||| || | | ||||||||||||||| ||||||||||||    
T  41205583 attatttaatatatctaaaaaattaattatctcttataaataggaccagaggaagtatt 41205641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 28249026 - 28249079
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaa 250  Q
    |||||| |||| ||||||||| |||||||| |||||||||||| ||| ||||||    
T  28249026 attatttaatgaatctaaaaagtcaactttttcttataaatagaactggaggaa 28249079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 11711323 - 11711387
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||| ||||||||||||||||| | |   |||| |||||||||||||||| |||||| |||||||    
T  11711323 tactccattcggtcctatttacgaaagaaaattgactttttagatacattgaataatgtatgtat 11711387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 41153204 - 41153248
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    |||| |||||| ||||||||| |||||||| ||||||||||||||    
T  41153204 attactcaatgaatctaaaaagtcaactttttcttataaatagga 41153248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 42341767 - 42341703
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||| |||||||||||||||||   |||| | |||||| ||||||| |||||| |||||||    
T  42341767 tacttcatccggtcctatttacaagagaaaattgattttttaaatacattgaataatgtatgtat 42341703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 29252 - 29382
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29252 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 29351  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  29352 taaaaagtcaactttctcttgtaaataggac 29382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 7e-50; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 41989563 - 41989703
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  41989563 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatt 41989662  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggact 243  Q
    ||||||||||||||| |||||||| |||| |||||||||||    
T  41989663 caatgtatctaaaaagtcaactttctcttttaaataggact 41989703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 13144888 - 13145031
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  13144888 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 13144987  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||||||||||||| | |||| ||||||||||  |||| ||||||    
T  13144988 taaaaaatcaactgtctcttgtaaataggaccggagggagtatt 13145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 31803098 - 31802968
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  31803098 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatatatacattattcaatgtatc 31802999  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  31802998 taaaaagtcaactttctcttgtaaataggac 31802968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 18353345 - 18353205
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||    
T  18353345 tcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatgtaa 18353246  T
Q  215 aaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||||||||| |||| ||||||||||  |||| ||||||    
T  18353245 aaaatcaactttctcttgtaaataggacatgagggagtatt 18353205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 110 - 255
Target Start/End: Complemental strand, 36419127 - 36418982
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    ||||| |||||||||||||   |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  36419127 ttcggacctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgta 36419028  T
Q  210 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    || ||||||||||||||||||| ||||||||||  |||| ||||||    
T  36419027 tcaaaaaaatcaactttatcttgtaaataggaccggagggagtatt 36418982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 93 - 242
Target Start/End: Complemental strand, 37699939 - 37699790
Alignment:
Q  93 aataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataa 192  Q
    ||||||||  |||| ||| |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||     
T  37699939 aataaaaagatactacatccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatac 37699840  T
Q  193 atacattattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  37699839 atacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 37699790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 103 - 254
Target Start/End: Complemental strand, 20578804 - 20578653
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| ||||||||||||||||| |   ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||    
T  20578804 tacttccttcggtcctatttacaatagacaatttactttttatatacattaaataatttatgtatttggtttaggttattgactagatagatatattatt 20578705  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    ||||||||||||||| |||||||| |||||||||||| || ||||| |||||    
T  20578704 caatgtatctaaaaagtcaactttctcttataaatagaaccagagggagtat 20578653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 25027702 - 25027845
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25027702 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatc 25027801  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||||| | |||| ||||||||||  |||| ||||||    
T  25027802 taaaaagtcaactgtctcttgtaaataggaccggagggagtatt 25027845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 7749926 - 7750056
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7749926 cggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatc 7750025  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  7750026 taaaaagtcaactttctcttgtaaataggac 7750056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 41046836 - 41046962
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| |||||||||||||||    
T  41046836 cggtcctatttacaagagacaatctactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgtatc 41046935  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    ||||||||||||||| |||||||||||    
T  41046936 taaaaaatcaactttctcttataaata 41046962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 21610441 - 21610312
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  21610441 cggtcctatttacaagaaacaattaactttttatatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattattcaatgtatc 21610342  T
Q  212 taaaaaatcaactttatcttataaatagga 241  Q
    |||||| | ||||||||||| |||||||||    
T  21610341 taaaaagttaactttatcttgtaaatagga 21610312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 15569480 - 15569344
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  15569480 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgattagatatatacattatt 15569381  T
Q  203 caatgtatctaaaaaatcaactttatcttataaatag 239  Q
    ||||||||||||||| |||||||| |||| |||||||    
T  15569380 caatgtatctaaaaagtcaactttctcttgtaaatag 15569344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 114 - 241
Target Start/End: Complemental strand, 6338453 - 6338326
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  6338453 gtcctatttacaaaagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgtatcta 6338354  T
Q  214 aaaaatcaactttatcttataaatagga 241  Q
    |||| |||||||  ||||||||||||||    
T  6338353 aaaagtcaacttcctcttataaatagga 6338326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 904106 - 903976
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| ||||    
T  904106 cggttctatttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacacacattattcaatatatc 904007  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  904006 taaaaagtcaactttctcttgtaaataggac 903976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 1108291 - 1108421
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||||||||||||||| |||    
T  1108291 cggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgcatc 1108390  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    ||||| |||||||||||||  ||||||||||    
T  1108391 taaaagatcaactttatctcgtaaataggac 1108421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 9601733 - 9601603
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||    
T  9601733 cggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggtttagatttttgactagatacatacattattcaatgtatc 9601634  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  9601633 taaaaagtcaactttctcttgtaaataggac 9601603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 113 - 255
Target Start/End: Complemental strand, 36417186 - 36417044
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| |    
T  36417186 ggtcctatttataagaaacaatttactttttagatacattaaataatttatgtatttggattaggttcttgactagatacatacattattcaatgtattt 36417087  T
Q  213 aaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||||| |||| ||| |||| ||||||||||  |||| ||||||    
T  36417086 aaaaagtcaaatttctcttgtaaataggaccggagggagtatt 36417044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 114 - 255
Target Start/End: Original strand, 26898201 - 26898342
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  26898201 gtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgcatcta 26898300  T
Q  214 aaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||| |||||||| |||| ||||||||||  |||| ||||||    
T  26898301 aaaagtcaactttctcttgtaaataggaccggagggagtatt 26898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 241
Target Start/End: Complemental strand, 16089249 - 16089097
Alignment:
Q  91 gaaataaaaaattacttcattcggtcctatttacaagaattaatttacttttt-agatacattaaataatttatgtatttggtgtaggttcttgactaga 189  Q
    |||||| |||| |||||  |||||||||||||||||||   |||||| ||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  16089249 gaaatagaaaagtacttttttcggtcctatttacaagagacaatttatttttttagatatattaaataatttatgtatttggtttaggttcatgactaga 16089150  T
Q  190 taaatacattattcaatgtatct-aaaaaatcaactttatcttataaatagga 241  Q
    || ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  16089149 tacatacattattcaatgtacctaaaaaaatcaactttatcttataaatagga 16089097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 115 - 255
Target Start/End: Original strand, 29374181 - 29374321
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  29374181 tcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgacgagatacatacattattcaatgtatctaa 29374280  T
Q  215 aaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||| |||||| | |||| ||||||||||  |||| ||||||    
T  29374281 aaagtcaactgtctcttgtaaataggaccggagggagtatt 29374321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 112 - 217
Target Start/End: Original strand, 7945845 - 7945950
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7945845 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatatatttggtttagattcttgactagatacatacattattcaatgtatc 7945944  T
Q  212 taaaaa 217  Q
    ||||||    
T  7945945 taaaaa 7945950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 135 - 255
Target Start/End: Original strand, 23411196 - 23411316
Alignment:
Q  135 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttata 234  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| ||| |||| ||    
T  23411196 ttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatctaaaaaatcaattttctcttgta 23411295  T
Q  235 aataggactagaggaagtatt 255  Q
    |||| |||  |||| ||||||    
T  23411296 aataagaccggagggagtatt 23411316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 2959388 - 2959249
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | ||  |||||||||||||| ||||||| ||    
T  2959388 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattctt 2959289  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  2959288 caatgtatctaaaaagtcaattttctcttgtaaataggac 2959249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 2967857 - 2967718
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | ||  |||||||||||||| ||||||| ||    
T  2967857 tactccatccggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattctt 2967758  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||||| |||| ||| |||| ||||||||||    
T  2967757 caatgtatctaaaaagtcaattttctcttgtaaataggac 2967718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 7053656 - 7053798
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||     
T  7053656 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggctcttgactagatacatacattattcaatgtatt 7053755  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| ||||| || |||| ||||||||||  |||| ||||||    
T  7053756 taaaaagtcaac-ttctcttgtaaataggaccggagggagtatt 7053798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 41815196 - 41815323
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||||||||||| ||  ||||||||||||| |||||||||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||||    
T  41815196 tcctatttacaataaacaatttactttttaaatacattaaataatttatgtatttggttcaggttcttgactaaatacgtacattattcaatgtatctaa 41815295  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    ||| |||||||| |||| ||||||||||    
T  41815296 aaagtcaactttctcttgtaaataggac 41815323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 1643352 - 1643495
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||| |   ||||||||||||||||||||| || |||||||||||||| | ||| |||||||||||||| |||||||||| ||||||||    
T  1643352 cggtcctatttacaatagacaatttactttttagatacattgaaaaatttatgtatttgatttagattcttgactagatacatacattattgaatgtatc 1643451  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||||| | |||||||||||||||  |||| ||||||    
T  1643452 taaaaagtcaactgtctcttataaataggaccggagggagtatt 1643495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 241
Target Start/End: Original strand, 2825895 - 2825997
Alignment:
Q  139 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 238  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||| |||| ||| |||| ||||||    
T  2825895 tttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaata 2825994  T
Q  239 gga 241  Q
    |||    
T  2825995 gga 2825997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 42311947 - 42311820
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   |||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||||||||||| |||    
T  42311947 tcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaagtttttgactaaatacatacattattcaatgtatttaa 42311848  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    ||| |||| ||| |||| ||||||||||    
T  42311847 aaagtcaattttttcttgtaaataggac 42311820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 21090496 - 21090386
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| | || ||| ||||    
T  21090496 aatttactttttaaatacattaaataatgtatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagttaattttctctt 21090397  T
Q  232 ataaataggac 242  Q
     ||||||||||    
T  21090396 gtaaataggac 21090386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 6910726 - 6910834
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||||||||| | ||| |||||||||||||  |||||||||||||| ||||||||||    
T  6910726 tatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttagattcttgactagatgcatacattattcaatatatctaaaaa 6910825  T
Q  218 atcaacttt 226  Q
     ||||||||    
T  6910826 gtcaacttt 6910834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 14338824 - 14338928
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    |||| |||||||||||   |||| | |||||||||| ||||||||||||||||||||||| ||  ||||||| |||||| ||| ||||||||||||||||    
T  14338824 ggtcttatttacaagagacaattaattttttagataaattaaataatttatgtatttggtttaaattcttgaatagatacataaattattcaatgtatct 14338923  T
Q  213 aaaaa 217  Q
    |||||    
T  14338924 aaaaa 14338928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 38393904 - 38393788
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | |||| |||||||||||||  |||| |||||||| ||| ||| ||||||||||| ||||| | ||| |||||||||| ||| ||| ||||||    
T  38393904 tacttcctccggttctatttacaagaaacaattgactttttaaatatattgaataatttatgaatttgatttagattcttgactatatacataaattatt 38393805  T
Q  203 caatgtatctaaaaaat 219  Q
    |||||||| | ||||||    
T  38393804 caatgtattttaaaaat 38393788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 15968449 - 15968321
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    |||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | ||||||| ||  |||||| |||| ||||    
T  15968449 ggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctagatacattaattattgaatgaatct 15968351  T
Q  213 aaaaaatcaactttatcttataaataggac 242  Q
    ||||||| |||||| |||||||||||||||    
T  15968350 aaaaaattaactttttcttataaataggac 15968321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 1138226 - 1138351
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| |||||  |||||||||||| |||  ||| ||||||| ||||||||||| ||  |||| | ||||||| ||  |||||| |||| ||     
T  1138226 cggtcctatttataagaaacaatttacttttttgatttattgaataattaatgtatttggtcta-tttctagtctagatacattaattatttaatgaatt 1138324  T
Q  212 taaaaaatcaactttatcttataaata 238  Q
    ||||||||||| ||| |||||||||||    
T  1138325 taaaaaatcaattttttcttataaata 1138351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 22731267 - 22731396
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||| || ||  |||||| |||| |||    
T  22731267 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattatttaatgaatc 22731365  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||||| |||||| |||||||||||||||    
T  22731366 taaaaaattaactttttcttataaataggac 22731396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 27488486 - 27488357
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || || |||||||| ||  |||| | ||||||| ||  |||||| |||| |||    
T  27488486 cggtcctatatataagaaacaatttacttttttgattcattcaatagttgatatatttggtctat-ttctaggctagatacatcaattattgaatgaatc 27488388  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||||| || ||| |||||||||||||||    
T  27488387 taaaaaattaattttttcttataaataggac 27488357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 42311818 - 42311875
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 169  Q
    ||||||||||||||||||  |||| |||||||| ||||||| |||||| |||||||||    
T  42311818 cggtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtattt 42311875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 21090384 - 21090439
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  21090384 cggtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtat 21090439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 7272241 - 7272270
Alignment:
Q  139 tttttagatacattaaataatttatgtatt 168  Q
    ||||||||||||||||||||||||||||||    
T  7272241 tttttagatacattaaataatttatgtatt 7272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 7750060 - 7750003
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||||   | || |||||||||||||||| |||||| |||||||    
T  7750060 ttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtat 7750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 2825997 - 2825945
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    ||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  2825997 tcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 2825945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 29299407 - 29299367
Alignment:
Q  202 tcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||||||||| ||| |||||||||||||||    
T  29299407 tcaatgaatctaaaaaatcaaatttttcttataaataggac 29299367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 38394483 - 38394439
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    ||||||||||| ||||||||| |||| ||| ||||||||||||||    
T  38394483 attattcaatgaatctaaaaagtcaattttttcttataaatagga 38394439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 14768106 - 14768236
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  14768106 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 14768205  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||||| |||| ||||||||||    
T  14768206 taaaaaatcaactttctcttgtaaataggac 14768236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 18765398 - 18765256
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  18765398 cggtcctatttacaagaaacaatttactttttagatgcattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatc 18765299  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    ||||||||||||||| |||| |||||| |||  ||||||||||    
T  18765298 taaaaaatcaactttctcttgtaaatatgaccggaggaagtat 18765256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 335515 - 335386
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  335515 cggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 335416  T
Q  212 taaaaaatcaactttatcttataaatagga 241  Q
    |||||| |||||||| |||| |||||||||    
T  335415 taaaaagtcaactttctcttgtaaatagga 335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 42605967 - 42605824
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||| ||||||||   |||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||    
T  42605967 cggtcctacttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaagttcttgactagatacatacattattcaatgtatc 42605868  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||    
T  42605867 taaaaaatcaactttatcttgtaaataggactggagggagtatt 42605824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 9465211 - 9465081
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  9465211 cggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatc 9465112  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| ||||||||||||| ||||||||||    
T  9465111 taaaaagtcaactttatcttgtaaataggac 9465081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 19202390 - 19202260
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  19202390 cggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacataccttattcaatgtatc 19202291  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  19202290 taaaaagtcaactttctcttgtaaataggac 19202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 25846651 - 25846521
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25846651 cggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 25846552  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||| | | |||||||||||||    
T  25846551 taaaaaatcaactgtcttttataaataggac 25846521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 40464550 - 40464660
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  40464550 aatttactttttagataaattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatttaaaaaatcaactttatctt 40464649  T
Q  232 ataaataggac 242  Q
    |||||||||||    
T  40464650 ataaataggac 40464660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 49122952 - 49123082
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  49122952 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggctcttgactagatacatacattattcaatgtatc 49123051  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| |||||| ||||||||||||    
T  49123052 taaaaagtcaaatttatcctataaataggac 49123082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 25113489 - 25113348
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  25113489 cggtcctatttacaagagacaatttactttttcgatacattaaataatttatgtatttggtttaggttcttgattaaatacatacattattcaatgtatc 25113390  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||||| |||||||| |||||||||||||||  |||||||||    
T  25113389 taaaaagtcaactttctcttataaataggaccggaggaagta 25113348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 21653482 - 21653354
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  21653482 gtcctatttacaagagacaatttactttttagatacattaaataatttatgcatttggtttaggttcttgactagatatatacattattcaatgtatcta 21653383  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    ||||||||| ||| |||| ||||||||||    
T  21653382 aaaaatcaaatttctcttgtaaataggac 21653354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 26999029 - 26999172
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  26999029 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 26999128  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||| | | |||| ||||||||||  |||| ||||||    
T  26999129 taaaaagtcaaatgtctcttgtaaataggaccggagggagtatt 26999172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 6087041 - 6086911
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  6087041 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 6086942  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||| | |||| ||||||||||    
T  6086941 taaaaagtcaactgtctcttgtaaataggac 6086911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 97 - 242
Target Start/End: Complemental strand, 9440283 - 9440138
Alignment:
Q  97 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatac 196  Q
    |||||||||| | | |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||    
T  9440283 aaaaattactacctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatac 9440184  T
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||||||||||||||||| |||||| | |||| ||||||||||    
T  9440183 attattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 9440138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 52114162 - 52114045
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  52114162 gtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttctttactagatacatacattattcaatgtatcta 52114063  T
Q  214 aaaaatcaactttatctt 231  Q
    ||||||||||||| ||||    
T  52114062 aaaaatcaactttctctt 52114045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 23825160 - 23825283
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  23825160 tcctatttacaagaaacaatttactttttagatacatcaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaa 23825259  T
Q  215 aaaatcaactttatcttataaata 238  Q
    ||| |||||||| |||| ||||||    
T  23825260 aaagtcaactttctcttgtaaata 23825283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 29019743 - 29019874
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  29019743 cggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgtatc 29019842  T
Q  212 taaaaaatcaactttatcttataaataggact 243  Q
    |||||| |||| ||| |||| |||||||||||    
T  29019843 taaaaagtcaattttctcttgtaaataggact 29019874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 47449927 - 47450054
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  47449927 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgtatctaa 47450026  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    ||| |||||||| | || ||||||||||    
T  47450027 aaactcaactttctattgtaaataggac 47450054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 10049676 - 10049806
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  10049676 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 10049775  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| | | |||| ||||||||||    
T  10049776 taaaaagtcaattgtctcttgtaaataggac 10049806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 103 - 241
Target Start/End: Original strand, 9190027 - 9190165
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| |||| || |||||||||||    |||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||    
T  9190027 tacttccttcgatcatatttacaagagacgatttacttttaagatacattaaataatttatgtatttggtttaaattcttgactagatacatacattatt 9190126  T
Q  203 caatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  9190127 caatgtatctaaaaagtcaactttctcttataaatagga 9190165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 28565077 - 28564945
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    |||||||||||||||||||   |||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  28565077 ttcggtcctatttacaagagacaatttattttttagatgcattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgta 28564978  T
Q  210 tctaaaaaatcaactttatcttataaataggac 242  Q
    | |||||| |||| ||| |||| ||||||||||    
T  28564977 tataaaaagtcaattttctcttgtaaataggac 28564945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 51698251 - 51698111
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||| | |||||||| |||||||||| |||||||||||    
T  51698251 tcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcattactagatacatacattattgaatgtatctaa 51698152  T
Q  215 aaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||| |||||||| |||| ||||||||||  |||| ||||||    
T  51698151 aaagtcaactttctcttgtaaataggaccggagggagtatt 51698111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 8243822 - 8243679
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  8243822 cggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatc 8243723  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||| | | |||| |||||| |||  || ||||||||    
T  8243722 taaaaagtcaattgtctcttgtaaataagaccggatgaagtatt 8243679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 28945664 - 28945794
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| ||| ||||    
T  28945664 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagaaacatacattattgaatatatc 28945763  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| ||| |||| ||||||||||    
T  28945764 taaaaagtcaattttctcttgtaaataggac 28945794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 40215040 - 40214910
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| ||||   || |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||||||| |||||||||    
T  40215040 cggtcctatttataagagacaagttactttttagatacattaaataatttatgtatttgatttagattcttgactagatacatacattatccaatgtatc 40214941  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  40214940 taaaaagtcaactttctcttgtaaataggac 40214910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 379078 - 379211
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggtt---cttgactagataaatacattattcaatgt 208  Q
    |||||||||||||||||   |||| | |||||||||||||||||||||||||||||||||| ||| ||   |||||||||||| ||| ||||||||||||    
T  379078 cggtcctatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagattgatcttgactagatacataaattattcaatgt 379177  T
Q  209 atctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||||| |||||||| |||||||||||||||    
T  379178 atctaaaaagtcaactttctcttataaataggac 379211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 42225702 - 42225572
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||| ||||||||| ||  |||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||    
T  42225702 cggtcttatttacaaaaaacaatttacttttttgatacattaaataatttatgtatttagtttaggttattgactagatacatacattattcaatgtatc 42225603  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||||| || ||| |||| ||||| ||||    
T  42225602 taaaaaattaattttttcttgtaaatgggac 42225572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 13826120 - 13826261
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||   ||||||||||||  |||||||||||||||||| ||||| | |||||||||||||| ||| ||||||| |||||||||||    
T  13826120 cggtcctatttacaagaaacgatttactttttatttacattaaataatttatgaatttgatttaggttcttgactaaatacatacattcttcaatgtatc 13826219  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||||| |||||||| |||| ||||||| ||  |||||||||    
T  13826220 taaaaagtcaactttctcttgtaaatagaaccggaggaagta 13826261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 1122305 - 1122413
Alignment:
Q  134 tttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttat 233  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||| ||||||||||||||||| |||| ||| |||| |    
T  1122305 tttactttttagatacattaaataatttatgtatttattttaggttcttgactagatacatacattcttcaatgtatctaaaaagtcaattttctcttgt 1122404  T
Q  234 aaataggac 242  Q
    |||||||||    
T  1122405 aaataggac 1122413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 238
Target Start/End: Complemental strand, 44593336 - 44593215
Alignment:
Q  117 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    |||||||||| || ||||||| |||||||||||||||||||||||||||||||||| || ||| |||| |||||| ||| |||||||||||||| |||||    
T  44593336 ctatttacaaaaagtaatttaatttttagatacattaaataatttatgtatttggtttaagtttttgattagatacatatattattcaatgtatttaaaa 44593237  T
Q  217 aatcaactttatcttataaata 238  Q
    | |||||||| |||| ||||||    
T  44593236 agtcaactttttcttgtaaata 44593215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 22003794 - 22003945
Alignment:
Q  103 tacttcattcggtcct-atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 201  Q
    |||||||| ||||||  ||||||||||   |||| | |||||||||||||| |||||||||| ||||| || ||| ||||| |||||||| ||| |||||    
T  22003794 tacttcatccggtccccatttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattat 22003893  T
Q  202 tcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||||||||||||||| |||| ||| | |||||||||||||  |||||||||    
T  22003894 tcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22003945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 253
Target Start/End: Original strand, 22011311 - 22011462
Alignment:
Q  103 tacttcattcggtcct-atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattat 201  Q
    |||||||| ||||||  ||||||||||   |||| | |||||||||||||| |||||||||| ||||| || ||| ||||| |||||||| ||| |||||    
T  22011311 tacttcatccggtccccatttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattat 22011410  T
Q  202 tcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagta 253  Q
    |||||||||||||||| |||| ||| | |||||||||||||  |||||||||    
T  22011411 tcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22011462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 8825762 - 8825844
Alignment:
Q  135 ttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||| |||||||||    
T  8825762 ttactttttagatatattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgcatctaaaaa 8825844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 40142023 - 40141930
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatac 196  Q
    |||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| ||| ||||    
T  40142023 tacttccttcagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaaattcttgactaaatacatac 40141930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 39341512 - 39341382
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt---caatgtatc 211  Q
    ||||||||||||||| ||  |||| ||||||||| |||||||||||||| |||||| | ||| |||||||||||||| ||||||||||    ||||||||    
T  39341512 tcctatttacaagaaatacgttacattttagatatattaaataatttatatatttgatttagattcttgactagatacatacattatttaataatgtatc 39341413  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| ||| |||| ||||||||||    
T  39341412 taaaaagtcaattttctcttgtaaataggac 39341382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 26123046 - 26123128
Alignment:
Q  160 ttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||| |||| |||| ||||||||||    
T  26123046 ttatgcatttggtttaggtttttgactagatacatacattattcaatgtatctaaaaagtcatctttctcttgtaaataggac 26123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 3484342 - 3484460
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    |||||||||||||||   |||| | ||||||||||||||||||| |||||||||||||| ||| ||||||| ||  |||    |||||||||| ||||||    
T  3484342 gtcctatttacaagagacaattaattttttagatacattaaatagtttatgtatttggtttagattcttgagtacgtaa----attattcaatatatcta 3484437  T
Q  214 aaaaatcaactttatcttataaa 236  Q
    ||||||||||||| | |||||||    
T  3484438 aaaaatcaactttcttttataaa 3484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 42841700 - 42841635
Alignment:
Q  151 ttaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    ||||||||||||||||||| || ||| ||||| |||||||| ||||||||||||||||||||||||    
T  42841700 ttaaataatttatgtatttagtttagattcttaactagatatatacattattcaatgtatctaaaa 42841635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 288 - 387
Target Start/End: Complemental strand, 25376390 - 25376291
Alignment:
Q  288 gtgaatgtattataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 387  Q
    ||||||| || |||| |||||||| ||||| ||||||||||| ||||||| |||||||| | |||||||||||||| ||| || |||| |||| ||||||    
T  25376390 gtgaatgcatgatagaatctataagcttgtttaatctaatggatagaaatgttggtccagtatggaccaatacatctatgagtccatgctaaatggcacc 25376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 55139201 - 55139286
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||| |||||||||||||||| ||||||||||||||||| | ||  |||||||| | ||| ||| |||||||||| ||||||||||    
T  55139201 aattgactttttagatacattgaataatttatgtatttgttttaaattcttgaccaaatacataaattattcaatatatctaaaaa 55139286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 16660401 - 16660334
Alignment:
Q  133 atttactttttagatacattaaataa--tttatgtatttggtgtaggttcttgactagataaatacat 198  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||||| ||||||| ||| ||||||    
T  16660401 atttactttttagatacattaaataaaatttatgtatttggtttaggttgttgactaaatacatacat 16660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 8987844 - 8987762
Alignment:
Q  137 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaat 219  Q
    |||||||||||||||| ||||||||||||||||||| ||  |||| ||| | ||| |||  |||||||||| |||||||||||    
T  8987844 actttttagatacattcaataatttatgtatttggtttaaattctagaccaaatacataagttattcaatgcatctaaaaaat 8987762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 22003947 - 22003829
Alignment:
Q  101 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 200  Q
    |||||||| | |||||||||||| || |   |||| |||||||||||||||| |||||||||||||| | ||  ||  |||  |||| ||| ||| ||||    
T  22003947 attacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaatta 22003848  T
Q  201 ttcaatgtatctaaaaaat 219  Q
    |||||||||||||||||||    
T  22003847 ttcaatgtatctaaaaaat 22003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 22011464 - 22011346
Alignment:
Q  101 attacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacatta 200  Q
    |||||||| | |||||||||||| || |   |||| |||||||||||||||| |||||||||||||| | ||  ||  |||  |||| ||| ||| ||||    
T  22011464 attacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaatta 22011365  T
Q  201 ttcaatgtatctaaaaaat 219  Q
    |||||||||||||||||||    
T  22011364 ttcaatgtatctaaaaaat 22011346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 28406475 - 28406605
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  |||| ||||||||||| | || ||||||| ||||||||||| ||  |||| |||  | || ||| ||||||||||| | |    
T  28406475 cggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattattcaatgaacc 28406574  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| | | |||| ||||||||||    
T  28406575 taaaaagtcaattgtttcttgtaaataggac 28406605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 48593282 - 48593177
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||| ||||||||  || | | ||||||||| |||| ||||||||||||||||||| ||  |||| |||  |||| ||  |||||||||||||||    
T  48593282 cggtcctatatacaagaaacaagtaattttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatc 48593183  T
Q  212 taaaaa 217  Q
    ||||||    
T  48593182 taaaaa 48593177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 54392226 - 54392311
Alignment:
Q  303 gatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcaccc 388  Q
    ||||||||| ||||| |||| ||||||| |||||||||| |||||| |||||||||||||  |||||| |||  |||||| |||||    
T  54392226 gatctataagcttgtgtaatttaatggtcagaaatcttgatccaatatggaccaatacatgtatgggtccatcctaaacgccaccc 54392311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 255
Target Start/End: Original strand, 8243681 - 8243833
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||||| ||||| |||||||||||   |||| |||||||||||||||| |||||| ||||||| | ||  ||  |||  || | ||| ||| ||||||    
T  8243681 tacttcatccggtcttatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatt 8243780  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||||||||||||||| | || | | |||| ||||||||||  |||| ||||||    
T  8243781 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 8243833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 241
Target Start/End: Complemental strand, 54537585 - 54537454
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    |||||||||||||| ||||| | ||| ||||||| ||| ||||  |||| || |||||||| | ||  |||| ||||||||| ||  |||| |||||| |    
T  54537585 ttcggtcctatttataagaaattattgacttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattactcaatgaa 54537486  T
Q  210 tctaaaaaatcaactttatcttataaatagga 241  Q
    ||| |||| |||| ||| ||||||||||||||    
T  54537485 tcttaaaagtcaaatttttcttataaatagga 54537454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 385
Target Start/End: Original strand, 52694726 - 52694812
Alignment:
Q  299 ataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggca 385  Q
    |||||||||||||  ||||  || |||||||| |||||||||| |||| | |||||||||||||| ||| || |||| |||||||||    
T  52694726 ataggatctataagtttgttcaagctaatggtcagaaatcttgatccagtatggaccaatacatctatgagtccatgctaaacggca 52694812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 19880869 - 19880917
Alignment:
Q  121 ttacaagaattaatttactttttagatacattaaataatttatgtattt 169  Q
    |||||||||  |||| || ||||||||||||||||||||||||||||||    
T  19880869 ttacaagaaacaattgacgttttagatacattaaataatttatgtattt 19880917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 43449013 - 43448969
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  43449013 attactcaatgaatctaaaaaatcaactttttcttataaatagga 43448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 51723433 - 51723389
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  51723433 attactcaatgaatctaaaaaatcaactttttcttataaatagga 51723389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 10049808 - 10049753
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  10049808 cggtcctatttacaagagacaattgactttttagatacattgaataatgtatgtat 10049753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 21662941 - 21662883
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||  |||| ||||||    
T  21662941 attactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggagtatt 21662883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 28406607 - 28406553
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgta 166  Q
    ||||||||||||||||||  |||| ||||||||| | |||| |||||||||||||    
T  28406607 cggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 53441915 - 53442045
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| |||||  | |||||||||| ||| ||||  |||| | ||||||||||| ||  ||||  || |  || ||  ||||||||||| ||     
T  53441915 cggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattcaatgaatt 53442014  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||||||||||||||    
T  53442015 taaaaagtcaactttttcttataaataggac 53442045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 1122417 - 1122360
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||||   |||| |||||||||||||||| || ||| |||||||    
T  1122417 ttcggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatgtat 1122360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 29019873 - 29019820
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  29019873 gtcctatttacaagagaaaattgactttttagatacattgaataatatatgtat 29019820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 29457850 - 29457974
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| |||||| || ||  || ||| |||| |||||    
T  29457850 gtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtcta-tttctagactaggtacatcaatcattgaatgaatcta 29457948  T
Q  214 aaaaatcaactttatcttataaatag 239  Q
    |||| | |||||| ||||||||||||    
T  29457949 aaaagttaactttttcttataaatag 29457974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 33129908 - 33129959
Alignment:
Q  393 tctaatatgctacaaaaatgatcttcttcatccataccttattattctcactcca 447  Q
    |||||||||||||||| ||   | ||||||||| |||||||||||||||||||||    
T  33129908 tctaatatgctacaaacat---cctcttcatccttaccttattattctcactcca 33129959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 49885475 - 49885392
Alignment:
Q  155 ataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaatag 239  Q
    |||||| ||||||||||| ||  |||| ||||||||| ||  |||||| |||| ||||||||||| || ||| ||||||||||||    
T  49885475 ataattgatgtatttggtctat-ttctagactagatacatcaattattgaatgaatctaaaaaattaattttttcttataaatag 49885392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 96 - 242
Target Start/End: Complemental strand, 5347878 - 5347733
Alignment:
Q  96 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 195  Q
    ||||||||||| | | |||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  5347878 aaaaaattactccctccggtcctatttacaagagacaatttactttt-agatacattaaataatttatgtatttggtttaggttcttgactagatacata 5347780  T
Q  196 cattattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||    
T  5347779 cattattgaatgtatctaaaaagtcaactttctcttataaataggac 5347733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 23248808 - 23248678
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||    
T  23248808 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattattcaatgtatc 23248709  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| ||||||||||||| ||||||||||    
T  23248708 taaaaagtcaactttatcttgtaaataggac 23248678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 110 - 255
Target Start/End: Original strand, 12763235 - 12763380
Alignment:
Q  110 ttcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgta 209  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  12763235 ttcggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 12763334  T
Q  210 tctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||||| |||| ||| |||| |||||| |||  |||| ||||||    
T  12763335 tctaaaaagtcaattttctcttgtaaataagaccggagggagtatt 12763380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 94 - 241
Target Start/End: Original strand, 3411322 - 3411469
Alignment:
Q  94 ataaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaa 193  Q
    |||||| | |||||| | ||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |    
T  3411322 ataaaataatacttcttccggtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaggtaca 3411421  T
Q  194 tacattattcaatgtatctaaaaaatcaactttatcttataaatagga 241  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  3411422 tacattattcaatgtatctaaaaagtcaaatttctcttataaatagga 3411469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 30866253 - 30866396
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  30866253 cggtcctatttaaaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgtatc 30866352  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    ||||||||||||||| |||| |||||| |||  |||| ||||||    
T  30866353 taaaaaatcaactttctcttgtaaataagaccggagggagtatt 30866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 29770350 - 29770460
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||| |||    
T  29770350 aatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatgcattattcaatgtatctaaaaagtcaactttaactt 29770449  T
Q  232 ataaataggac 242  Q
    |||||||||||    
T  29770450 ataaataggac 29770460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 253
Target Start/End: Original strand, 7463457 - 7463599
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  ||||||||||||| |||||||| |||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||||    
T  7463457 cggtcctatttacaagaaacaatttactttttaaatacattacataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatc 7463556  T
Q  212 taaaaaa-tcaactttatcttataaataggactagaggaagta 253  Q
    ||||||| |||| ||| ||||||||||||||| ||||| ||||    
T  7463557 taaaaaagtcaattttctcttataaataggaccagagggagta 7463599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 32050214 - 32050093
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  32050214 tatttacaagagacaatttactttttagatatattaaataatttatgtatttggtgtaggttcttgagtagatacatacattattcaatatatctaaaaa 32050115  T
Q  218 atcaactttatcttataaatag 239  Q
    ||||| ||| ||||||||||||    
T  32050114 atcaattttctcttataaatag 32050093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 119 - 254
Target Start/End: Complemental strand, 19979627 - 19979491
Alignment:
Q  119 atttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaa 218  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  19979627 atttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaa 19979528  T
Q  219 -tcaactttatcttataaataggactagaggaagtat 254  Q
     | |||||| |||||||||||  |||||||| |||||    
T  19979527 gttaactttctcttataaatataactagagggagtat 19979491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 34281803 - 34281679
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaa 217  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||    
T  34281803 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatgtaaaaa 34281704  T
Q  218 atcaactttatcttataaataggac 242  Q
     |||||||| |||| ||||||||||    
T  34281703 gtcaactttctcttgtaaataggac 34281679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 5909620 - 5909481
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  5909620 tacttcctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattatt 5909521  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
     |||||||||||||  |||| ||| |||| ||||||||||    
T  5909520 gaatgtatctaaaaggtcaattttctcttgtaaataggac 5909481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 103 - 238
Target Start/End: Complemental strand, 12426679 - 12426544
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | ||||| |||||||||||   | ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||||||||    
T  12426679 tacttcctccggtcttatttacaagagacagtttactttttagatacattaaataatttacgtatttggtttagattcttgactagatacatacattatt 12426580  T
Q  203 caatgtatctaaaaaatcaactttatcttataaata 238  Q
    ||||||||||||||||| |||||| |||||||||||    
T  12426579 caatgtatctaaaaaattaactttctcttataaata 12426544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 20397823 - 20397953
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| ||||   |||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||||    
T  20397823 cggtcctatttataagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattcaatgtatc 20397922  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  20397923 taaaaagtcaactttctcttgtaaataggac 20397953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 35427799 - 35427669
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||| |||||||||| |||||||     
T  35427799 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgtttttgactatatacatacattattgaatgtatt 35427700  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    ||||| ||||| |||||||||||||||||||    
T  35427699 taaaagatcaattttatcttataaataggac 35427669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 10599453 - 10599325
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    ||||||||||||||   |||||| |||||||||||||  ||||||||||||||||||| |||||  ||||||||||| ||||||||||||||||||||||    
T  10599453 tcctatttacaagagacaatttattttttagatacatacaataatttatgtatttggtttaggtgtttgactagatacatacattattcaatgtatctaa 10599354  T
Q  215 aaaa-tcaactttatcttataaataggac 242  Q
    |||| ||||||||||||| ||||||||||    
T  10599353 aaaagtcaactttatcttgtaaataggac 10599325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 7107638 - 7107781
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||| |||||||||||   |||| | |||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||| |||||||||||||||    
T  7107638 cggtcatatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagatttttgactagatacataaattattcaatgtatc 7107737  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||| |||||||| |||| ||||||||||  |||| ||||||    
T  7107738 taaaaagtcaactttctcttgtaaataggaccggaggtagtatt 7107781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 113 - 241
Target Start/End: Complemental strand, 46680968 - 46680840
Alignment:
Q  113 ggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatct 212  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||| |||||| | || ||||||||||||||| ||||||| |||||||| |||    
T  46680968 ggtcttatttacaagaaacaatttactttttagatacattaaataatttatatatttgatttaagttcttgactagatatatacattcttcaatgtgtct 46680869  T
Q  213 aaaaaatcaactttatcttataaatagga 241  Q
    ||||| |||| |||||| | |||||||||    
T  46680868 aaaaagtcaattttatcatgtaaatagga 46680840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 12085142 - 12085034
Alignment:
Q  134 tttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttat 233  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||| |  ||| ||||||||||||||||||||||| | |||| ||| |||| |    
T  12085142 tttattttttagatacattaaataatttatgtatttgatttaggttcttgatttaatacatacattattcaatgtatctaaacagtcaattttctcttgt 12085043  T
Q  234 aaataggac 242  Q
    |||||||||    
T  12085042 aaataggac 12085034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 15074630 - 15074729
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||||||||||||  |||||||||     ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| |||||||    
T  15074630 cggtcctatttacaagaaacaatttactt-----atacattaaataatttatgtatttggtttaagttcttgactagatacatacattattcgatgtatc 15074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 6173938 - 6174072
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||| ||| ||||| |||||||||||   ||||||  |||||||||||   ||  ||||||||||||||| |||||||||||||||||| ||||||||||    
T  6173938 tactccatccggtcatatttacaagagacaatttatattttagataca---aaggatttatgtatttggtttaggttcttgactagatacatacattatt 6174034  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||||||||||||||| |||  || |||||||||||||||    
T  6174035 caatgtatctaaaaaaacaa--ttctcttataaataggac 6174072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 96 - 238
Target Start/End: Complemental strand, 17351627 - 17351486
Alignment:
Q  96 aaaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaata 195  Q
    |||||| |||| ||| |||||||||||| ||||   |||| | ||||||||||| |||||||||||||||||||  | ||| ||||||| |||||| |||    
T  17351627 aaaaaaatactccatccggtcctatttaaaagagacaattaattttttagatacgttaaataatttatgtatttatt-tagattcttgagtagatacata 17351529  T
Q  196 cattattcaatgtatctaaaaaatcaactttatcttataaata 238  Q
     |||||||||||||||||| ||||||||||| || ||||||||    
T  17351528 aattattcaatgtatctaacaaatcaactttctcctataaata 17351486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 3614661 - 3614720
Alignment:
Q  388 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactcca 447  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  3614661 ctctttctaatatgctacaaaaatcatcttcttcatccttaccttattattctcactcca 3614720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 26563932 - 26564059
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||| ||||||||||  |||| |||||||||||| ||| ||||| ||||||||||||| ||| |||| ||| |||||  || |||||||||||||||| |    
T  26563932 tcctttttacaagaagcaattaactttttagatatattgaataaattatgtatttggtttagattctagaccagatacgtaaattattcaatgtatctga 26564031  T
Q  215 aaaatcaactttatcttataaataggac 242  Q
    ||| |||| | | |||| ||||||||||    
T  26564032 aaagtcaattgtttcttgtaaataggac 26564059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 46449913 - 46449805
Alignment:
Q  117 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    ||||||||||||   |||| | |||||| |||||||||||||||||| |||||||| ||| || || | || ||| ||| ||||||||||||||||||||    
T  46449913 ctatttacaagagacaattaattttttaaatacattaaataatttatatatttggtttagatttttaattaaatacataaattattcaatgtatctaaaa 46449814  T
Q  217 aatcaactt 225  Q
    | |||||||    
T  46449813 agtcaactt 46449805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 388 - 447
Target Start/End: Complemental strand, 35611886 - 35611827
Alignment:
Q  388 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactcca 447  Q
    |||| |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  35611886 ctctttctaatatgctaaaaaaatcatcttcttcatccttaccttattattctcactcca 35611827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 447
Target Start/End: Complemental strand, 5569116 - 5569060
Alignment:
Q  388 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactcca 447  Q
    |||| |||||||||||||||||||   ||||||||||| |||||||||||||||||||||    
T  5569116 ctctttctaatatgctacaaaaat---cttcttcatccttaccttattattctcactcca 5569060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 4826901 - 4826760
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||||| || |||||  |||||||||||| ||| |||| |||| || ||||||||||| ||  |||| | |||  || ||  |||||| |||| |||    
T  4826901 cggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaagtacatcaattattgaatgaatc 4826803  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    |||||| | |||||| |||||||||||||||| |||| |||||    
T  4826802 taaaaagttaactttttcttataaataggactggaggtagtat 4826760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 242
Target Start/End: Original strand, 8566114 - 8566219
Alignment:
Q  137 actttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaa 236  Q
    ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||| |||||||||||||| ||| |||||||||    
T  8566114 acttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatcaaatttttcttataaa 8566213  T
Q  237 taggac 242  Q
    ||||||    
T  8566214 taggac 8566219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 36655436 - 36655493
Alignment:
Q  181 ttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 238  Q
    ||||||||||| ||||||| ||||||||||||||||| |||| ||| |||| ||||||    
T  36655436 ttgactagatacatacattgttcaatgtatctaaaaattcaattttctcttgtaaata 36655493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 18672241 - 18672102
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattatt 202  Q
    |||||| | ||||||| ||||||| ||  |||| || ||||||||||||| ||||||||||||||  ||| ||| |||| | | | ||| ||| ||||      
T  18672241 tacttcttccggtcctttttacaaaaaaaaattgacattttagatacattgaataatttatgtatccggtttagattctaggc-acatacataaattaaa 18672143  T
Q  203 caatgtatctaaaaaatcaactttatcttataaataggact 243  Q
    |||||||||||||||||||| |   |||| |||||||||||    
T  18672142 caatgtatctaaaaaatcaattgcttcttgtaaataggact 18672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 7107770 - 7107715
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||   | || |||||||||||||||| ||||||||||||||    
T  7107770 cggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtat 7107715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 10007627 - 10007714
Alignment:
Q  155 ataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||| ||||||||||||| ||  ||||  || ||||| ||  ||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  10007627 ataaattatgtatttggtctatattctacacaagatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggac 10007714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 22055867 - 22055760
Alignment:
Q  115 tcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaa 214  Q
    |||||||||||| ||  |||| ||||||||  || ||| |||||||||| |||||||| ||  ||||| |||  ||| ||| |||||||||| |||||||    
T  22055867 tcctatttacaaaaaacaattgactttttacgtatattgaataatttatttatttggtttaaattctttactgaatacataaattattcaatatatctaa 22055768  T
Q  215 aaaatcaa 222  Q
    ||| ||||    
T  22055767 aaagtcaa 22055760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 26564059 - 26563956
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||||||  |||| |||||| ||||||||| ||||||||| |||| |||| |||  |||  || | ||| |||  ||||||||| ||||||    
T  26564059 gtcctatttacaagaaacaattgacttttcagatacattgaataatttacgtatctggtctagaatctaaaccaaatacataatttattcaatatatcta 26563960  T
Q  214 aaaa 217  Q
    ||||    
T  26563959 aaaa 26563956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 387
Target Start/End: Original strand, 41422987 - 41423086
Alignment:
Q  288 gtgaatgtattataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 387  Q
    ||||||| || |||| |||||||| ||||| ||||||||||| || |||| ||||| || | | |||||||||||| ||| || |||| |||| ||||||    
T  41422987 gtgaatgcatgatagaatctataagcttgtttaatctaatggataaaaatgttggttcagtatagaccaatacatctatgagtccatgctaaatggcacc 41423086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 29365714 - 29365772
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||| |||||| ||||||||| |||| ||| ||||||| ||||||||||||| ||||||    
T  29365714 attactcaatgaatctaaaaagtcaattttttcttatatataggactagagggagtatt 29365772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 36245384 - 36245514
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||| |||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||| |||    
T  36245384 cggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatc 36245483  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| ||| |||||||||||||||    
T  36245484 taaaaagtcaattttttcttataaataggac 36245514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 2523863 - 2523908
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggac 242  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||    
T  2523863 attactcaatgaatctaaaaagtcaactttttcttataaataggac 2523908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 12085023 - 12085088
Alignment:
Q  103 tacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatt 168  Q
    |||| ||| |||||||||||||||||   |||| ||| |||||||||||| |||||| ||||||||    
T  12085023 tactccatccggtcctatttacaagagaaaattgactgtttagatacattgaataatgtatgtatt 12085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 23248676 - 23248733
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtattt 169  Q
    |||||||||||||||||   | || |||||||||||||||| |||||| |||||||||    
T  23248676 cggtcctatttacaagataaagttgactttttagatacattgaataatatatgtattt 23248733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 23871034 - 23870993
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaata 238  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  23871034 attattcaatgtatcgaaaaaatcaaatttttcttataaata 23870993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 28677325 - 28677454
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||| |||||  | || ||||||| ||| ||||  |||| | ||||||||||| ||  |||| ||| ||||| ||  |||| |||||  |||    
T  28677325 cggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaataaatc 28677424  T
Q  212 taaaaaatcaactttatcttataaatagga 241  Q
    |||||| |||| ||| ||||||||||||||    
T  28677425 taaaaagtcaattttttcttataaatagga 28677454  T

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Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 41850651 - 41850610
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaata 238  Q
    ||||||||||| ||||||||||| |||||| |||||||||||    
T  41850651 attattcaatgaatctaaaaaattaactttttcttataaata 41850610  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 387
Target Start/End: Complemental strand, 22629289 - 22629201
Alignment:
Q  299 ataggatctataaacttgtataatctaatggttagaaatcttggtccaatctggaccaatacatccatgggtgcatggtaaacggcacc 387  Q
    |||||||||||||  ||||  ||  ||||||| | |||||||| |||| | |||||||||||||| ||| || |||| |||||||||||    
T  22629289 ataggatctataagtttgttcaagttaatggtcaaaaatcttgatccagtatggaccaatacatctatgagtccatgctaaacggcacc 22629201  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 32903572 - 32903644
Alignment:
Q  154 aataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaacttt 226  Q
    |||||||||||||| |  | ||| ||||||| |||| | ||| ||| | ||||||||||||||||||||||||    
T  32903572 aataatttatgtatcttatttagattcttgattagaaacataaattgtccaatgtatctaaaaaatcaacttt 32903644  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 46449811 - 46449843
Alignment:
Q  137 actttttagatacattaaataatttatgtattt 169  Q
    |||||||||||||||| ||||||||||||||||    
T  46449811 actttttagatacattgaataatttatgtattt 46449843  T

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Target: scaffold2107 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 114 - 255
Target Start/End: Original strand, 453 - 594
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||    
T  453 gtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttcgtttaggttcttgactagatacatacattattcaatgtatcta 552  T
Q  214 aaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||| |||| ||| |||| ||||||||||  |||| ||||||    
T  553 aaaagtcaattttctcttgtaaataggaccggagggagtatt 594  T

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Target: scaffold2107; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 583 - 528
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtat 167  Q
    |||||||||||||||||   |||| |||||||||||||||| |||||| |||||||    
T  583 cggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 112 - 255
Target Start/End: Original strand, 38833 - 38976
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  38833 cggtcctagttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatt 38932  T
Q  212 taaaaaatcaactttatcttataaataggactagaggaagtatt 255  Q
    |||||  |||||| | |||| ||||||||||  |||| ||||||    
T  38933 taaaatgtcaactgtctcttgtaaataggaccggagggagtatt 38976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 11038 - 11168
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||| |||||||||||||||    
T  11038 cggtcctttttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgattagatacatatattattcaatgtatc 11137  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||||||| |||| ||||||||||    
T  11138 taaaaagtcaactttctcttgtaaataggac 11168  T

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Target: scaffold0246 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 15165 - 15292
Alignment:
Q  114 gtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatcta 213  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||||||    
T  15165 gtcctatttacaataaacaatttgctttttagatacattaaataatttatgtatttggtttaggttcttgacta-atacgtacattattcaatgtatcta 15263  T
Q  214 aaaaatcaactttatcttataaataggac 242  Q
    |||| | |||||| |||| ||||||||||    
T  15264 aaaagttaactttctcttgtaaataggac 15292  T

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Target: scaffold0024 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 35962 - 36092
Alignment:
Q  112 cggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatc 211  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| || ||||||| |||| |||    
T  35962 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtattttgtttaggttcttaactagatacatgcattattgaatgcatc 36061  T
Q  212 taaaaaatcaactttatcttataaataggac 242  Q
    |||||| |||| ||| |||| ||||||||||    
T  36062 taaaaagtcaattttctcttgtaaataggac 36092  T

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Target: scaffold0592 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 407 - 516
Alignment:
Q  132 aatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatctt 231  Q
    ||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||    
T  407 aatttactttttagatatattaaataatttatatatatggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaaccttctctt 506  T
Q  232 ataaatagga 241  Q
     |||||||||    
T  507 gtaaatagga 516  T

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Target: scaffold0007 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 77458 - 77355
Alignment:
Q  139 tttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaaaatcaactttatcttataaata 238  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| |||||||||||||||| |||| |||||||| |||||||||||    
T  77458 tttttagatacattaaataatttatgtatttggtttagattcttgactacatacataaattattcaatgtatctgaaaagtcaactttctcttataaata 77359  T
Q  239 ggac 242  Q
    ||||    
T  77358 ggac 77355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 118 - 242
Target Start/End: Complemental strand, 3774 - 3641
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttat---------gtatttggtgtaggttcttgactagataaatacattattcaatgt 208  Q
    |||||||||||   ||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||| ||| ||||||||||||||||    
T  3774 tatttacaagagacaatttactttttagatacattaaataatttatataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgt 3675  T
Q  209 atctaaaaaatcaactttatcttataaataggac 242  Q
    ||||||||| |||||||| | |||||||||||||    
T  3674 atctaaaaagtcaactttcttttataaataggac 3641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 5229 - 5351
Alignment:
Q  117 ctatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    |||||||||||||  ||||||||||||  ||| |||||||||||||| |||||||| |||||||||||||| ||| ||| |||||||||| |||||||||    
T  5229 ctatttacaagaaacaatttacttttttaatatattaaataatttatatatttggtttaggttcttgactaaatacatatattattcaatttatctaaaa 5328  T
Q  217 aatcaactttatcttataaatag 239  Q
    | | || ||| |||| |||||||    
T  5329 agttaattttctcttgtaaatag 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1903 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1903
Description:

Target: scaffold1903; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 388 - 447
Target Start/End: Complemental strand, 963 - 904
Alignment:
Q  388 ctctatctaatatgctacaaaaatgatcttcttcatccataccttattattctcactcca 447  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  963 ctctttctaatatgctacaaaaatcatcttcttcatccataccttattattctcactcca 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 183926 - 183828
Alignment:
Q  118 tatttacaagaattaatttactttttagatacattaaataatttatgtatttggtgtaggttcttgactagataaatacattattcaatgtatctaaaa 216  Q
    ||||||||| |||||||| |||||||| ||| ||| ||||||||||||||   || ||| || ||||| | ||| ||| |||||||||||||| |||||    
T  183926 tatttacaaaaattaattaactttttaaatatattgaataatttatgtatcaagtttagatttttgaccaaatacataaattattcaatgtatttaaaa 183828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 54721 - 54646
Alignment:
Q  97 aaaaattacttcattcggtcctatttacaagaattaatttactttttagatacattaaataatttatgtatttggt 172  Q
    ||||| |||||| | || ||||||||||| ||| ||||| |||||| ||||||||| ||||||||| |||| ||||    
T  54721 aaaaaatacttcctccgatcctatttacaggaaataattgacttttcagatacattgaataatttaagtatatggt 54646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 16562 - 16505
Alignment:
Q  197 attattcaatgtatctaaaaaatcaactttatcttataaataggactagaggaagtat 254  Q
    |||||| |||| ||||||||||| |||||| |||| ||||||||||| |||| |||||    
T  16562 attattgaatgaatctaaaaaattaactttttcttgtaaataggactggaggtagtat 16505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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