View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13735_low_10 (Length: 399)

Name: NF13735_low_10
Description: NF13735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13735_low_10
NF13735_low_10
[»] chr6 (21 HSPs)
chr6 (125-381)||(582236-582492)
chr6 (1-67)||(17175848-17175914)
chr6 (1-67)||(18889471-18889537)
chr6 (1-67)||(33696869-33696935)
chr6 (2-65)||(6031569-6031632)
chr6 (1-67)||(2309250-2309316)
chr6 (1-67)||(18365401-18365467)
chr6 (1-67)||(18370665-18370731)
chr6 (1-67)||(23290908-23290974)
chr6 (1-67)||(28675320-28675386)
chr6 (1-67)||(32702377-32702443)
chr6 (1-58)||(6127449-6127506)
chr6 (9-67)||(11548416-11548474)
chr6 (1-67)||(17705296-17705361)
chr6 (1-67)||(33695153-33695219)
chr6 (8-67)||(29693624-29693683)
chr6 (23-67)||(11548576-11548620)
chr6 (7-65)||(8515556-8515614)
chr6 (23-60)||(33695315-33695352)
chr6 (23-60)||(33696736-33696773)
chr6 (23-67)||(9752233-9752277)
[»] chr7 (25 HSPs)
chr7 (1-67)||(45637883-45637949)
chr7 (1-65)||(24395143-24395207)
chr7 (1-67)||(34483010-34483076)
chr7 (1-67)||(3962150-3962216)
chr7 (1-67)||(15329446-15329512)
chr7 (1-67)||(30848741-30848807)
chr7 (2-67)||(15577674-15577739)
chr7 (1-65)||(4974564-4974628)
chr7 (1-67)||(35445569-35445635)
chr7 (1-67)||(42611983-42612049)
chr7 (1-67)||(48880754-48880820)
chr7 (1-54)||(35876416-35876469)
chr7 (15-67)||(25167683-25167735)
chr7 (1-67)||(29737316-29737382)
chr7 (9-67)||(37476907-37476965)
chr7 (7-61)||(42696261-42696315)
chr7 (9-67)||(18037157-18037215)
chr7 (2-65)||(20009928-20009991)
chr7 (9-57)||(15238564-15238612)
chr7 (23-67)||(15238415-15238459)
chr7 (23-60)||(4974723-4974760)
chr7 (23-60)||(35444598-35444635)
chr7 (23-60)||(42611851-42611888)
chr7 (23-60)||(45637752-45637789)
chr7 (146-185)||(12344186-12344226)
[»] chr5 (26 HSPs)
chr5 (1-67)||(8145545-8145611)
chr5 (1-67)||(4892374-4892440)
chr5 (1-67)||(14138839-14138905)
chr5 (1-67)||(33584156-33584222)
chr5 (1-67)||(3521834-3521900)
chr5 (1-67)||(6043339-6043405)
chr5 (1-67)||(12850974-12851040)
chr5 (1-67)||(25398410-25398476)
chr5 (1-67)||(37321620-37321686)
chr5 (1-65)||(12614567-12614631)
chr5 (1-61)||(38899559-38899619)
chr5 (1-67)||(11360958-11361024)
chr5 (9-67)||(22912884-22912942)
chr5 (1-57)||(4433845-4433901)
chr5 (1-67)||(2477808-2477874)
chr5 (1-67)||(3362951-3363017)
chr5 (6-62)||(13664736-13664792)
chr5 (9-57)||(17545519-17545567)
chr5 (23-67)||(12614721-12614765)
chr5 (23-67)||(17545673-17545717)
chr5 (23-67)||(22913042-22913086)
chr5 (23-67)||(31640928-31640972)
chr5 (28-67)||(10458430-10458469)
chr5 (24-67)||(31640768-31640811)
chr5 (23-65)||(27482017-27482059)
chr5 (23-60)||(8145415-8145452)
[»] chr3 (35 HSPs)
chr3 (1-67)||(8320409-8320475)
chr3 (1-67)||(30385572-30385638)
chr3 (1-67)||(3137241-3137307)
chr3 (1-67)||(22426172-22426238)
chr3 (1-67)||(33113966-33114032)
chr3 (1-67)||(34482715-34482781)
chr3 (1-67)||(37216880-37216946)
chr3 (1-67)||(2754891-2754957)
chr3 (1-67)||(3089591-3089657)
chr3 (1-67)||(6042049-6042115)
chr3 (1-67)||(19650727-19650793)
chr3 (1-67)||(3456236-3456302)
chr3 (1-67)||(3574353-3574419)
chr3 (1-67)||(26612918-26612984)
chr3 (1-67)||(37522225-37522291)
chr3 (1-67)||(47738283-47738349)
chr3 (1-67)||(33145884-33145950)
chr3 (1-67)||(33839707-33839773)
chr3 (7-65)||(36864862-36864920)
chr3 (9-67)||(8361866-8361924)
chr3 (9-67)||(9796856-9796914)
chr3 (9-67)||(40328011-40328069)
chr3 (1-67)||(48161078-48161144)
chr3 (9-67)||(41224414-41224472)
chr3 (1-59)||(42298034-42298092)
chr3 (1-67)||(42921297-42921363)
chr3 (4-65)||(46919069-46919130)
chr3 (10-67)||(41883049-41883106)
chr3 (1-65)||(24343721-24343785)
chr3 (23-67)||(8362033-8362077)
chr3 (23-67)||(9797017-9797061)
chr3 (23-57)||(2754760-2754794)
chr3 (23-60)||(3137402-3137439)
chr3 (23-67)||(41883211-41883255)
chr3 (23-67)||(47738138-47738182)
[»] scaffold0228 (6 HSPs)
scaffold0228 (1-67)||(26108-26174)
scaffold0228 (1-67)||(16156-16222)
scaffold0228 (1-32)||(8574-8605)
scaffold0228 (23-60)||(8442-8479)
scaffold0228 (23-60)||(16024-16061)
scaffold0228 (23-60)||(25976-26013)
[»] chr8 (45 HSPs)
chr8 (1-67)||(10044520-10044586)
chr8 (1-67)||(14129031-14129097)
chr8 (1-67)||(17841677-17841743)
chr8 (1-67)||(24211199-24211265)
chr8 (1-67)||(26041940-26042006)
chr8 (1-67)||(37985883-37985949)
chr8 (1-67)||(40779956-40780022)
chr8 (1-61)||(8454005-8454065)
chr8 (5-67)||(1503670-1503732)
chr8 (1-67)||(1645791-1645857)
chr8 (1-67)||(6108060-6108126)
chr8 (1-67)||(15187732-15187798)
chr8 (1-67)||(20091628-20091694)
chr8 (1-67)||(34665553-34665619)
chr8 (11-67)||(31347603-31347659)
chr8 (1-67)||(3596868-3596934)
chr8 (1-67)||(25581066-25581132)
chr8 (1-67)||(32064918-32064984)
chr8 (1-67)||(42754869-42754935)
chr8 (7-67)||(41819595-41819655)
chr8 (1-67)||(38017104-38017171)
chr8 (1-67)||(30055688-30055754)
chr8 (1-67)||(35353213-35353279)
chr8 (1-67)||(39772629-39772695)
chr8 (1-57)||(32394029-32394084)
chr8 (1-67)||(37132508-37132574)
chr8 (9-67)||(7022159-7022217)
chr8 (7-67)||(3890442-3890502)
chr8 (23-60)||(25581227-25581264)
chr8 (23-67)||(27782105-27782149)
chr8 (23-67)||(31347770-31347814)
chr8 (30-67)||(3890611-3890648)
chr8 (23-60)||(17841838-17841875)
chr8 (23-60)||(20091789-20091826)
chr8 (2-59)||(27835288-27835345)
chr8 (23-60)||(32064785-32064822)
chr8 (23-60)||(34665422-34665459)
chr8 (23-60)||(39772789-39772826)
chr8 (23-60)||(40780117-40780154)
chr8 (23-60)||(42755030-42755067)
chr8 (23-67)||(3597029-3597073)
chr8 (23-67)||(7017853-7017897)
chr8 (23-67)||(7022011-7022055)
chr8 (23-67)||(15972865-15972909)
chr8 (19-67)||(30834883-30834931)
[»] chr4 (43 HSPs)
chr4 (1-67)||(22199431-22199497)
chr4 (1-67)||(36073521-36073587)
chr4 (1-67)||(46442016-46442082)
chr4 (1-67)||(49387714-49387780)
chr4 (1-67)||(10442614-10442681)
chr4 (1-67)||(2625009-2625075)
chr4 (1-67)||(9089042-9089108)
chr4 (1-67)||(21802147-21802213)
chr4 (1-67)||(36073123-36073189)
chr4 (1-67)||(44893040-44893106)
chr4 (1-67)||(44893598-44893664)
chr4 (1-67)||(53123203-53123269)
chr4 (1-65)||(33530513-33530577)
chr4 (1-67)||(4751619-4751685)
chr4 (1-67)||(7744939-7745005)
chr4 (1-67)||(47290238-47290304)
chr4 (1-61)||(31078652-31078712)
chr4 (1-67)||(23964291-23964357)
chr4 (1-67)||(24128411-24128477)
chr4 (1-67)||(17655602-17655668)
chr4 (1-67)||(30563381-30563447)
chr4 (1-67)||(50156406-50156471)
chr4 (1-67)||(37934769-37934835)
chr4 (9-67)||(24392854-24392912)
chr4 (1-67)||(37219803-37219869)
chr4 (2-67)||(11314079-11314144)
chr4 (1-67)||(42671840-42671906)
chr4 (7-64)||(44744610-44744667)
chr4 (23-67)||(33530676-33530720)
chr4 (23-60)||(9088910-9088947)
chr4 (23-60)||(10442777-10442814)
chr4 (23-60)||(17655470-17655507)
chr4 (23-60)||(21802310-21802347)
chr4 (23-60)||(31078807-31078844)
chr4 (23-60)||(44893201-44893238)
chr4 (23-60)||(44893466-44893503)
chr4 (23-60)||(46441884-46441921)
chr4 (23-60)||(47290106-47290143)
chr4 (23-60)||(49387876-49387913)
chr4 (23-60)||(53123071-53123108)
chr4 (23-67)||(24392700-24392744)
chr4 (7-67)||(36073289-36073349)
chr4 (23-67)||(36073731-36073775)
[»] chr2 (25 HSPs)
chr2 (1-67)||(33380379-33380445)
chr2 (1-67)||(35160931-35160997)
chr2 (1-67)||(9293402-9293468)
chr2 (1-67)||(10662060-10662126)
chr2 (1-67)||(13355020-13355086)
chr2 (1-67)||(23267889-23267955)
chr2 (1-67)||(3989248-3989314)
chr2 (1-67)||(21936254-21936320)
chr2 (9-67)||(43331092-43331150)
chr2 (1-67)||(7475335-7475401)
chr2 (1-67)||(16767289-16767355)
chr2 (1-67)||(31174662-31174728)
chr2 (9-60)||(34320991-34321042)
chr2 (1-67)||(22592882-22592950)
chr2 (9-61)||(21393518-21393570)
chr2 (9-67)||(9723586-9723644)
chr2 (9-67)||(37335824-37335882)
chr2 (23-67)||(14941354-14941398)
chr2 (24-67)||(37335746-37335789)
chr2 (1-59)||(14941199-14941257)
chr2 (23-67)||(27847665-27847709)
chr2 (23-61)||(43330951-43330989)
chr2 (23-60)||(9293564-9293601)
chr2 (23-60)||(23268050-23268087)
chr2 (23-60)||(31174822-31174859)
[»] chr1 (27 HSPs)
chr1 (1-67)||(19015576-19015642)
chr1 (1-67)||(20304957-20305023)
chr1 (1-67)||(40215160-40215226)
chr1 (1-67)||(51737677-51737743)
chr1 (1-67)||(18404620-18404686)
chr1 (1-67)||(25463848-25463914)
chr1 (1-67)||(36966535-36966601)
chr1 (1-67)||(37821661-37821727)
chr1 (1-67)||(41876269-41876335)
chr1 (1-67)||(44094869-44094935)
chr1 (1-67)||(6883659-6883725)
chr1 (1-67)||(9910118-9910184)
chr1 (1-67)||(25973579-25973645)
chr1 (9-67)||(32000093-32000151)
chr1 (9-67)||(33786458-33786516)
chr1 (1-67)||(3559789-3559855)
chr1 (9-67)||(40273888-40273946)
chr1 (2-67)||(44690849-44690914)
chr1 (23-67)||(19722926-19722970)
chr1 (23-67)||(33786623-33786667)
chr1 (7-62)||(52329453-52329508)
chr1 (1-43)||(10167571-10167613)
chr1 (23-60)||(6883527-6883564)
chr1 (23-60)||(16045786-16045823)
chr1 (23-60)||(40215028-40215065)
chr1 (23-60)||(44094738-44094775)
chr1 (23-67)||(40273735-40273779)
[»] scaffold0178 (1 HSPs)
scaffold0178 (1-67)||(11793-11859)
[»] scaffold0085 (2 HSPs)
scaffold0085 (1-67)||(48021-48087)
scaffold0085 (23-60)||(47890-47927)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-67)||(4568-4634)
[»] scaffold0096 (2 HSPs)
scaffold0096 (1-67)||(41182-41248)
scaffold0096 (23-60)||(41051-41088)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-67)||(13014-13080)


Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 125 - 381
Target Start/End: Complemental strand, 582492 - 582236
Alignment:
Q  125 tgtaaccaaggcttccgtgaaacatgttcctcatgcaaacctcctactcaccatgtcacacacactcgtgtcaacacaccaacatcttcaccgttgtata 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  582492 tgtaaccaaggcttccgtgaaacatgttcctcatgcaaacctcctactcaccatgtcacacacactcgtgtcaacacaccaacatcttcaccgttgtata 582393  T
Q  225 aaatcaaaccttcacacatacactaatattatagtctcttacattcattctccaagaaatcaaaaccttgttttattttccacgagcatactcaaaaatg 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  582392 aaatcaaaccttcacacatacactaatattatagtctcttacattcattctccaagaaatcaaaaccttgttttattttccacgagcatactcaaaaatg 582293  T
Q  325 gcacaacctcaagttcaagtccacacaacagcaacaacccgtacttatgaaactggt 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  582292 gcacaacctcaagttcaagtccacacaacagcaacaacccgtacttatgaaactggt 582236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17175914 - 17175848
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17175914 gaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttct 17175848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18889537 - 18889471
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18889537 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattct 18889471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33696869 - 33696935
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33696869 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttct 33696935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 6031632 - 6031569
Alignment:
Q  2 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttt 6031569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2309316 - 2309250
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2309316 gaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttct 2309250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18365467 - 18365401
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  18365467 gaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttct 18365401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18370731 - 18370665
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  18370731 gaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttct 18370665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23290974 - 23290908
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  23290974 gaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttct 23290908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28675320 - 28675386
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  28675320 gaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttct 28675386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32702377 - 32702443
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  32702377 gaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttct 32702443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6127449 - 6127506
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 58  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6127449 gaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 11548474 - 11548416
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttct 11548416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17705361 - 17705296
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  17705361 gaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttct 17705296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33695219 - 33695153
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  33695219 gaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttct 33695153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 29693624 - 29693683
Alignment:
Q  8 taataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||||||| ||| |||||| ||||||||||||||| |||||||||    
T  29693624 taataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttct 29693683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 11548576 - 11548620
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttct 11548620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 8515614 - 8515556
Alignment:
Q  7 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    ||||||||| ||||||||||||||  ||||||||| | |||||||||| || |||||||    
T  8515614 ttaataaataagactgaaatctaagagtgattattctaccatgtcatttttaaatcttt 8515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 33695315 - 33695352
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaa 33695352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 33696773 - 33696736
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaa 33696736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 9752233 - 9752277
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttct 9752277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45637883 - 45637949
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45637883 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 45637949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24395143 - 24395207
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395143 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 24395207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34483010 - 34483076
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34483010 gaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 34483076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3962150 - 3962216
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  3962150 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttct 3962216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15329446 - 15329512
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  15329446 gaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttct 15329512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30848741 - 30848807
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  30848741 gaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttct 30848807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 15577739 - 15577674
Alignment:
Q  2 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttct 15577674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4974628 - 4974564
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4974628 gaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttt 4974564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35445569 - 35445635
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  35445569 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttct 35445635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42611983 - 42612049
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  42611983 gaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttct 42612049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48880820 - 48880754
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  48880820 gaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttct 48880754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35876416 - 35876469
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35876416 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 35876469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 25167735 - 25167683
Alignment:
Q  15 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 25167683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29737316 - 29737382
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||    
T  29737316 gaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttct 29737382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 37476965 - 37476907
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttct 37476907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 42696261 - 42696315
Alignment:
Q  7 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 61  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaat 42696315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 18037157 - 18037215
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttct 18037215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 20009991 - 20009928
Alignment:
Q  2 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    |||| ||||||||||||||| ||||||||   ||||||||||| ||||||||||||||||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttt 20009928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 15238564 - 15238612
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 57  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattctt 15238612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 15238459 - 15238415
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttct 15238415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 4974723 - 4974760
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaa 4974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 35444635 - 35444598
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaa 35444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 42611888 - 42611851
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaa 42611851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 45637789 - 45637752
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaa 45637752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 12344226 - 12344186
Alignment:
Q  146 acatgttcctcatgcaaacctcc-tactcaccatgtcacac 185  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  12344226 acatgttcctcatgcaaacctccttactcactatgtcacac 12344186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8145545 - 8145611
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145545 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 8145611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4892374 - 4892440
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4892374 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 4892440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14138839 - 14138905
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14138839 gaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 14138905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33584222 - 33584156
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33584222 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 33584156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3521900 - 3521834
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  3521900 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttct 3521834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6043405 - 6043339
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  6043405 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttct 6043339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12850974 - 12851040
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  12850974 gaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttct 12851040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25398410 - 25398476
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  25398410 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttct 25398476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37321686 - 37321620
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  37321686 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttct 37321620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12614631 - 12614567
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12614631 gaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttt 12614567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38899619 - 38899559
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 61  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38899619 gaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaat 38899559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11361024 - 11360958
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  11361024 gaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttct 11360958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 22912942 - 22912884
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttct 22912884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4433901 - 4433845
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 57  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4433901 gaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2477808 - 2477874
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  2477808 gaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttct 2477874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3362951 - 3363017
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||    
T  3362951 gaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttct 3363017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  6 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 62  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 17545567 - 17545519
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 57  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattctt 17545519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 12614721 - 12614765
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| || ||||||||||||||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttct 12614765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 17545673 - 17545717
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttct 17545717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 22913042 - 22913086
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttct 22913086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 31640928 - 31640972
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttct 31640972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 10458469 - 10458430
Alignment:
Q  28 taaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttct 10458430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 31640811 - 31640768
Alignment:
Q  24 aatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||  ||||||| |||||||||||||||||||||||||    
T  31640811 aatctaaagtcgattattctgccatgtcattcttgaatctttct 31640768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 27482017 - 27482059
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttt 27482059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 8145452 - 8145415
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaa 8145415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8320475 - 8320409
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8320475 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 8320409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30385572 - 30385638
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385572 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 30385638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3137307 - 3137241
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3137307 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 3137241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22426238 - 22426172
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22426238 gaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttct 22426172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33113966 - 33114032
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33113966 gaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 33114032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34482781 - 34482715
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34482781 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 34482715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37216946 - 37216880
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37216946 gaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttct 37216880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2754891 - 2754957
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  2754891 gaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttct 2754957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3089591 - 3089657
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  3089591 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttct 3089657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6042049 - 6042115
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6042049 gaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttct 6042115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19650793 - 19650727
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  19650793 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttct 19650727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3456236 - 3456302
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  3456236 gaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttct 3456302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3574419 - 3574353
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  3574419 gaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttct 3574353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26612918 - 26612984
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  26612918 gaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttct 26612984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37522225 - 37522291
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  37522225 gaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttct 37522291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47738283 - 47738349
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  47738283 gaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttct 47738349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33145884 - 33145950
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  33145884 gaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttct 33145950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33839707 - 33839773
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  33839707 gaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttct 33839773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 36864920 - 36864862
Alignment:
Q  7 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttt 36864862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 8361924 - 8361866
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttct 8361866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 9796914 - 9796856
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttct 9796856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 40328011 - 40328069
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttct 40328069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48161078 - 48161144
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||    
T  48161078 gaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttct 48161144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 41224414 - 41224472
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||| |||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttct 41224472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42298034 - 42298092
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttga 59  Q
    ||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  42298034 gaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42921297 - 42921363
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||| |||||    
T  42921297 gaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttct 42921363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 46919069 - 46919130
Alignment:
Q  4 agattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    |||||||||||| |||| |||||||| ||||||||||| |||||||||||| ||||||||||    
T  46919069 agattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttt 46919130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 41883106 - 41883049
Alignment:
Q  10 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||| ||||||||||| |||| |||||||| | |||||||||||||||||||||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttct 41883049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24343721 - 24343785
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    ||||| ||||||||| |||||||||||||| |||||||||  |  ||||||||||||||||||||    
T  24343721 gaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttt 24343785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 8362033 - 8362077
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttct 8362077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 9797017 - 9797061
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttct 9797061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 2754794 - 2754760
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattctt 57  Q
    ||||||||||||||||||| |||||||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattctt 2754760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 3137402 - 3137439
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaa 3137439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 41883211 - 41883255
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||| ||| |||||||||| ||||||||||||||||||| |||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttct 41883255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 47738182 - 47738138
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||| |||||| |||||| |||||||||||| |||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttct 47738138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 63; Significance: 3e-27; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26108 - 26174
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26108 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 26174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16156 - 16222
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  16156 gaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttct 16222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8574 - 8605
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  8574 gaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 8479 - 8442
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaa 8442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 16061 - 16024
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaa 16024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 26013 - 25976
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaa 25976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10044520 - 10044586
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10044520 gaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 10044586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14129031 - 14129097
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14129031 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttct 14129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17841743 - 17841677
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17841743 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 17841677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24211265 - 24211199
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24211265 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttct 24211199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 26042006 - 26041940
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26042006 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 26041940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37985949 - 37985883
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37985949 gaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 37985883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 40780022 - 40779956
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40780022 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 40779956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8454005 - 8454065
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8454005 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 8454065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 1503732 - 1503670
Alignment:
Q  5 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 1503670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1645857 - 1645791
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  1645857 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttct 1645791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6108126 - 6108060
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  6108126 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttct 6108060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15187732 - 15187798
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  15187732 gaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttct 15187798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20091694 - 20091628
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20091694 gaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttct 20091628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34665553 - 34665619
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34665553 gaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttct 34665619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 31347659 - 31347603
Alignment:
Q  11 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 31347603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3596934 - 3596868
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  3596934 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttct 3596868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25581132 - 25581066
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  25581132 gaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttct 25581066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32064918 - 32064984
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  32064918 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttct 32064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42754935 - 42754869
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  42754935 gaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttct 42754869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 41819655 - 41819595
Alignment:
Q  7 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttct 41819595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38017104 - 38017171
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggt-gattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  38017104 gaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttct 38017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30055688 - 30055754
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  30055688 gaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttct 30055754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35353213 - 35353279
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||    
T  35353213 gaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttct 35353279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39772695 - 39772629
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  39772695 gaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttct 39772629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32394029 - 32394084
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32394029 gaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattctt 32394084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37132574 - 37132508
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  37132574 gaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttct 37132508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 7022159 - 7022217
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttct 7022217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 3890502 - 3890442
Alignment:
Q  7 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||| ||| | |||||||| |||||||||| |||||| ||||||||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttct 3890442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 25581227 - 25581264
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaa 25581264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 27782105 - 27782149
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttct 27782149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 31347770 - 31347814
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttct 31347814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 3890611 - 3890648
Alignment:
Q  30 aaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  3890611 aaggtgattattctgccatgtcattcttgaatttttct 3890648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 17841838 - 17841875
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaa 17841875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 20091789 - 20091826
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaa 20091826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 27835345 - 27835288
Alignment:
Q  2 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttga 59  Q
    |||| ||||||||||||| |||||||||| | ||||||||||| ||| ||||| ||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 32064822 - 32064785
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaa 32064785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 34665459 - 34665422
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaa 34665422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 39772789 - 39772826
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaa 39772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 40780117 - 40780154
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaa 40780154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 42755030 - 42755067
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaa 42755067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 3597029 - 3597073
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| ||| |||||| |||||||||||||||||| ||||||    
T  3597029 aaatctaagggtaattattctgccatgtcattcttgaaactttct 3597073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 7017853 - 7017897
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttct 7017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 7022055 - 7022011
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttct 7022011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 15972865 - 15972909
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| || |||||||||||| |||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttct 15972909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 30834931 - 30834883
Alignment:
Q  19 actgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||| |||| ||||| || |||||||||||| |||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttct 30834883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22199431 - 22199497
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22199431 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttct 22199497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36073521 - 36073587
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36073521 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 36073587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 46442016 - 46442082
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46442016 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 46442082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 49387780 - 49387714
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49387780 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 49387714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10442681 - 10442614
Alignment:
Q  1 gaaagattaa-taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10442681 gaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 10442614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2625009 - 2625075
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  2625009 gaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttct 2625075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9089042 - 9089108
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  9089042 gaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttct 9089108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21802213 - 21802147
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  21802213 gaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttct 21802147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36073123 - 36073189
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  36073123 gaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttct 36073189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44893106 - 44893040
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  44893106 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttct 44893040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44893598 - 44893664
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  44893598 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttct 44893664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 53123203 - 53123269
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  53123203 gaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttct 53123269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33530577 - 33530513
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 65  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33530577 gaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttt 33530513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4751619 - 4751685
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  4751619 gaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttct 4751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7745005 - 7744939
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  7745005 gaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttct 7744939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47290238 - 47290304
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  47290238 gaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttct 47290304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31078712 - 31078652
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 61  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  31078712 gaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaat 31078652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23964357 - 23964291
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||||||    
T  23964357 gaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttct 23964291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24128411 - 24128477
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||    
T  24128411 gaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttct 24128477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17655602 - 17655668
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||||||||||||||||||||||||||| |||||| || |||||||||||| |||||||||    
T  17655602 gaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttct 17655668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30563381 - 30563447
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| ||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  30563381 gaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttct 30563447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50156471 - 50156406
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||| |||||    
T  50156471 gaaagattaataaatgagactgaaatct-aaggtgattattatgtcatgtcattcttgaatttttct 50156406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37934835 - 37934769
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||| ||| ||||| ||||||||||||    
T  37934835 gaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttct 37934769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 24392854 - 24392912
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| ||| |||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttct 24392912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37219803 - 37219869
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||||| |||||||||    
T  37219803 gaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttct 37219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 11314144 - 11314079
Alignment:
Q  2 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttct 11314079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42671840 - 42671906
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| |||| |||||||||| ||||||||   |||||||| || ||||||||||||||||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttct 42671906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 44744610 - 44744667
Alignment:
Q  7 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctt 64  Q
    ||||||||| |||||||||||||| | | ||||||| | |||||||||||||||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatctt 44744667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 33530676 - 33530720
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttct 33530720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 9088947 - 9088910
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaa 9088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 10442777 - 10442814
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaa 10442814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 17655507 - 17655470
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaa 17655470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 21802310 - 21802347
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaa 21802347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 31078807 - 31078844
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaa 31078844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 44893201 - 44893238
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaa 44893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 44893503 - 44893466
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaa 44893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 46441921 - 46441884
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaa 46441884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 47290143 - 47290106
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaa 47290106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 49387876 - 49387913
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaa 49387913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 53123108 - 53123071
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaa 53123071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 24392744 - 24392700
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||| ||| |||||||||| ||||||||||||||||||| |||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttct 24392700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 36073349 - 36073289
Alignment:
Q  7 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| |||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttct 36073289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 36073731 - 36073775
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||| ||||||||| || |||||||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttct 36073775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33380379 - 33380445
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33380379 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 33380445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35160931 - 35160997
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35160931 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 35160997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9293468 - 9293402
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  9293468 gaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttct 9293402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10662060 - 10662126
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  10662060 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttct 10662126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13355020 - 13355086
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  13355020 gaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttct 13355086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23267955 - 23267889
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  23267955 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttct 23267889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3989248 - 3989314
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  3989248 gaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttct 3989314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21936254 - 21936320
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21936254 gaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattct 21936320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 43331092 - 43331150
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttct 43331150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7475401 - 7475335
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| |||||    
T  7475401 gaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttct 7475335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16767355 - 16767289
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  16767355 gaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttct 16767289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31174728 - 31174662
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||    
T  31174728 gaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttct 31174662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22592882 - 22592950
Alignment:
Q  1 gaaagattaataaatgagactgaaa--tctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||| ||||||||| |||||||||  ||||| ||||||||||||| ||||||||||||||||||||||    
T  22592882 gaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttct 22592950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 21393570 - 21393518
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 61  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat 21393518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 9723586 - 9723644
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||| ||||||||||||||||||||||||| || |||||||||||| ||| |||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttct 9723644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 37335824 - 37335882
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||| || |||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttct 37335882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 14941354 - 14941398
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttct 14941398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 37335789 - 37335746
Alignment:
Q  24 aatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| ||||||||| |||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttct 37335746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14941257 - 14941199
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttga 59  Q
    ||||| ||||||||| ||| |||||||||| | ||||||||||| ||||||||||||||    
T  14941257 gaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 27847709 - 27847665
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| || ||||||||||||||||||||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttct 27847665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 43330989 - 43330951
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaat 61  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaat 43330951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 9293564 - 9293601
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaa 9293601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 23268050 - 23268087
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaa 23268087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 31174822 - 31174859
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaa 31174859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19015576 - 19015642
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19015576 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 19015642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20305023 - 20304957
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20305023 gaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 20304957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40215160 - 40215226
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40215160 gaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 40215226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 51737677 - 51737743
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51737677 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 51737743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18404620 - 18404686
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  18404620 gaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttct 18404686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25463848 - 25463914
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  25463848 gaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttct 25463914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36966601 - 36966535
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  36966601 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttct 36966535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37821727 - 37821661
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  37821727 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttct 37821661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41876335 - 41876269
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  41876335 gaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttct 41876269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44094869 - 44094935
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  44094869 gaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttct 44094935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6883659 - 6883725
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  6883659 gaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttct 6883725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9910184 - 9910118
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  9910184 gaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttct 9910118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25973579 - 25973645
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  25973579 gaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttct 25973645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 32000151 - 32000093
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttct 32000093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 33786516 - 33786458
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttct 33786458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3559789 - 3559855
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||    
T  3559789 gaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttct 3559855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 40273888 - 40273946
Alignment:
Q  9 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttct 40273946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 44690914 - 44690849
Alignment:
Q  2 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttct 44690849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 19722970 - 19722926
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttct 19722926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 33786623 - 33786667
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttct 33786667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 52329453 - 52329508
Alignment:
Q  7 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 62  Q
    ||||||| | |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10167571 - 10167613
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgt 43  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  10167571 gaaaaattaataaataagactgaaatctaaaggtgattattgt 10167613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 6883564 - 6883527
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaa 6883527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 16045786 - 16045823
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaa 16045823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 40215065 - 40215028
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaa 40215028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 44094775 - 44094738
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaa 44094738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 40273779 - 40273735
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||| |||||||||| || |||||||||||||||| |||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttct 40273735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11793 - 11859
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  11793 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttct 11859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48021 - 48087
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  48021 gaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttct 48087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 47927 - 47890
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaa 47890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4568 - 4634
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  4568 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttct 4634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41182 - 41248
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  41182 gaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttct 41248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 41088 - 41051
Alignment:
Q  23 aaatctaaaggtgattattgtgccatgtcattcttgaa 60  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaa 41051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13014 - 13080
Alignment:
Q  1 gaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttct 67  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||    
T  13014 gaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttct 13080  T

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