View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13736_low_2 (Length: 802)

Name: NF13736_low_2
Description: NF13736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13736_low_2
NF13736_low_2
[»] scaffold0140 (1 HSPs)
scaffold0140 (8-787)||(33579-34357)
[»] chr8 (20 HSPs)
chr8 (325-399)||(6849255-6849329)
chr8 (330-399)||(44380613-44380682)
chr8 (334-402)||(12697716-12697784)
chr8 (340-399)||(36497664-36497723)
chr8 (325-399)||(6004947-6005021)
chr8 (325-399)||(12045647-12045721)
chr8 (334-399)||(9985681-9985746)
chr8 (344-399)||(14531624-14531679)
chr8 (325-387)||(30578269-30578331)
chr8 (337-399)||(35500959-35501021)
chr8 (337-399)||(40380284-40380346)
chr8 (330-392)||(40464966-40465028)
chr8 (334-399)||(6161951-6162016)
chr8 (337-402)||(14228707-14228772)
chr8 (334-399)||(21648934-21648999)
chr8 (330-399)||(27630900-27630969)
chr8 (358-399)||(31731450-31731491)
chr8 (331-392)||(33415711-33415772)
chr8 (330-399)||(37562140-37562209)
chr8 (334-399)||(42012593-42012658)
[»] chr5 (28 HSPs)
chr5 (325-399)||(29803228-29803302)
chr5 (330-404)||(41460114-41460188)
chr5 (331-399)||(17063868-17063936)
chr5 (325-399)||(7144580-7144654)
chr5 (333-387)||(38690968-38691022)
chr5 (330-399)||(26627333-26627402)
chr5 (325-404)||(15639383-15639462)
chr5 (330-380)||(3960168-3960218)
chr5 (334-404)||(12718383-12718453)
chr5 (330-399)||(582866-582935)
chr5 (330-399)||(5996670-5996739)
chr5 (330-387)||(19437272-19437329)
chr5 (327-399)||(16292245-16292316)
chr5 (337-392)||(32379935-32379990)
chr5 (334-404)||(12779609-12779679)
chr5 (337-399)||(14914375-14914437)
chr5 (325-399)||(20040792-20040865)
chr5 (325-399)||(34428163-34428237)
chr5 (334-399)||(1107984-1108049)
chr5 (330-399)||(2456029-2456098)
chr5 (337-398)||(3154649-3154710)
chr5 (334-399)||(6538873-6538938)
chr5 (334-399)||(8897385-8897450)
chr5 (330-399)||(18638824-18638893)
chr5 (330-399)||(31025004-31025073)
chr5 (330-399)||(34400621-34400690)
chr5 (334-399)||(36572694-36572759)
chr5 (331-372)||(39032821-39032862)
[»] chr4 (32 HSPs)
chr4 (325-399)||(44272804-44272878)
chr4 (331-399)||(11012144-11012212)
chr4 (331-399)||(42853942-42854010)
chr4 (331-404)||(23220333-23220406)
chr4 (337-399)||(3475872-3475934)
chr4 (325-399)||(18874916-18874989)
chr4 (325-399)||(23094379-23094453)
chr4 (333-399)||(35017156-35017222)
chr4 (345-399)||(47014942-47014996)
chr4 (325-399)||(54801001-54801075)
chr4 (331-392)||(8455871-8455932)
chr4 (334-399)||(41609682-41609747)
chr4 (334-399)||(51039119-51039184)
chr4 (356-404)||(12074470-12074518)
chr4 (334-398)||(37775430-37775494)
chr4 (323-399)||(46566932-46567008)
chr4 (337-404)||(925068-925135)
chr4 (363-402)||(52430877-52430916)
chr4 (330-404)||(14090049-14090123)
chr4 (334-404)||(25523201-25523271)
chr4 (338-392)||(25936250-25936304)
chr4 (330-404)||(34114116-34114190)
chr4 (365-399)||(45764422-45764456)
chr4 (334-403)||(51908577-51908647)
chr4 (334-399)||(12241061-12241126)
chr4 (336-401)||(12694433-12694498)
chr4 (331-404)||(18568815-18568888)
chr4 (330-387)||(18880800-18880857)
chr4 (334-399)||(22071499-22071564)
chr4 (333-374)||(24337358-24337399)
chr4 (334-399)||(33820339-33820404)
chr4 (330-399)||(46912798-46912867)
[»] chr3 (30 HSPs)
chr3 (330-404)||(37134605-37134679)
chr3 (325-399)||(45150260-45150334)
chr3 (325-399)||(7867705-7867779)
chr3 (325-399)||(36869831-36869905)
chr3 (330-399)||(36799401-36799470)
chr3 (323-379)||(40785691-40785747)
chr3 (337-404)||(50280093-50280160)
chr3 (325-399)||(1295335-1295409)
chr3 (325-399)||(1901920-1901994)
chr3 (325-399)||(1911366-1911440)
chr3 (333-399)||(28300650-28300716)
chr3 (330-399)||(462400-462469)
chr3 (330-399)||(12094388-12094457)
chr3 (333-404)||(14957834-14957905)
chr3 (325-404)||(50294106-50294185)
chr3 (325-399)||(275229-275303)
chr3 (325-399)||(41717266-41717340)
chr3 (325-399)||(45528936-45529010)
chr3 (334-404)||(51464275-51464345)
chr3 (330-399)||(7213-7282)
chr3 (331-392)||(622460-622521)
chr3 (331-392)||(32981121-32981182)
chr3 (330-387)||(35425671-35425728)
chr3 (330-379)||(42102260-42102309)
chr3 (331-380)||(43333670-43333719)
chr3 (330-399)||(43900756-43900825)
chr3 (334-399)||(47988488-47988553)
chr3 (334-399)||(47997775-47997840)
chr3 (334-399)||(48007062-48007127)
chr3 (330-399)||(52678576-52678645)
[»] chr1 (36 HSPs)
chr1 (330-404)||(20268512-20268586)
chr1 (331-399)||(30530574-30530642)
chr1 (325-399)||(40238441-40238515)
chr1 (325-398)||(5043096-5043169)
chr1 (330-399)||(23554754-23554823)
chr1 (331-399)||(31184284-31184352)
chr1 (325-405)||(32821632-32821712)
chr1 (331-399)||(34395919-34395987)
chr1 (331-391)||(47138030-47138090)
chr1 (331-399)||(50118896-50118964)
chr1 (325-399)||(9882653-9882727)
chr1 (325-399)||(25702209-25702283)
chr1 (325-399)||(30687055-30687129)
chr1 (334-404)||(31703481-31703551)
chr1 (330-399)||(43640984-43641051)
chr1 (330-399)||(7078499-7078568)
chr1 (330-399)||(30530398-30530467)
chr1 (330-374)||(44950420-44950464)
chr1 (330-402)||(48576504-48576576)
chr1 (331-403)||(52417530-52417602)
chr1 (331-386)||(18954300-18954355)
chr1 (325-380)||(51168762-51168817)
chr1 (337-399)||(18610776-18610838)
chr1 (325-379)||(21255779-21255833)
chr1 (334-372)||(24158680-24158718)
chr1 (325-399)||(25988978-25989052)
chr1 (325-399)||(27352633-27352707)
chr1 (333-399)||(33675903-33675969)
chr1 (325-374)||(6954310-6954359)
chr1 (330-399)||(11097883-11097952)
chr1 (334-399)||(18541054-18541119)
chr1 (330-399)||(26547237-26547306)
chr1 (334-399)||(30439253-30439318)
chr1 (323-380)||(34941912-34941969)
chr1 (325-402)||(36930748-36930824)
chr1 (330-399)||(49596238-49596307)
[»] chr7 (29 HSPs)
chr7 (330-399)||(37392046-37392115)
chr7 (325-406)||(26123362-26123444)
chr7 (323-399)||(4971293-4971369)
chr7 (331-404)||(40760770-40760841)
chr7 (330-399)||(22692087-22692156)
chr7 (331-404)||(28109955-28110028)
chr7 (325-402)||(34304672-34304749)
chr7 (330-399)||(45154539-45154607)
chr7 (331-399)||(40693528-40693596)
chr7 (325-380)||(44187713-44187768)
chr7 (325-399)||(8061738-8061812)
chr7 (334-404)||(42640841-42640911)
chr7 (330-399)||(26153649-26153717)
chr7 (330-399)||(44564722-44564790)
chr7 (330-398)||(5724042-5724110)
chr7 (330-402)||(5868301-5868373)
chr7 (331-375)||(43107637-43107681)
chr7 (333-380)||(5978601-5978648)
chr7 (325-403)||(18925991-18926067)
chr7 (333-399)||(28824506-28824572)
chr7 (334-399)||(30769664-30769727)
chr7 (337-399)||(37385239-37385301)
chr7 (330-380)||(46148188-46148238)
chr7 (345-399)||(47530305-47530359)
chr7 (330-399)||(16567319-16567388)
chr7 (330-399)||(16598274-16598343)
chr7 (330-399)||(17500700-17500769)
chr7 (330-399)||(17552445-17552514)
chr7 (334-399)||(19426583-19426648)
[»] chr6 (11 HSPs)
chr6 (331-399)||(12044335-12044403)
chr6 (325-399)||(9188938-9189012)
chr6 (325-399)||(32729892-32729966)
chr6 (325-392)||(30744247-30744314)
chr6 (334-386)||(14803376-14803428)
chr6 (323-399)||(20712070-20712145)
chr6 (336-399)||(35077126-35077190)
chr6 (337-399)||(6435039-6435101)
chr6 (337-399)||(29376721-29376783)
chr6 (330-399)||(11785358-11785427)
chr6 (334-399)||(21506339-21506404)
[»] chr2 (23 HSPs)
chr2 (325-399)||(1052490-1052564)
chr2 (334-399)||(9202519-9202584)
chr2 (334-399)||(36816419-36816484)
chr2 (325-380)||(6742404-6742459)
chr2 (333-399)||(14713989-14714055)
chr2 (325-399)||(23358573-23358647)
chr2 (325-399)||(30856810-30856884)
chr2 (325-399)||(36763518-36763591)
chr2 (344-398)||(43621961-43622015)
chr2 (354-399)||(3299128-3299173)
chr2 (331-399)||(546385-546453)
chr2 (331-399)||(7497991-7498059)
chr2 (330-402)||(35965575-35965647)
chr2 (325-399)||(8352838-8352912)
chr2 (330-380)||(14954598-14954648)
chr2 (325-399)||(15283244-15283318)
chr2 (330-404)||(28165127-28165201)
chr2 (334-387)||(39147780-39147834)
chr2 (330-399)||(2308321-2308390)
chr2 (330-399)||(3959897-3959966)
chr2 (334-399)||(6746220-6746285)
chr2 (357-406)||(22303199-22303248)
chr2 (330-399)||(42554779-42554848)
[»] scaffold0024 (1 HSPs)
scaffold0024 (330-399)||(60472-60541)
[»] scaffold0002 (1 HSPs)
scaffold0002 (325-399)||(440721-440795)
[»] scaffold0662 (1 HSPs)
scaffold0662 (345-399)||(1081-1135)
[»] scaffold0003 (1 HSPs)
scaffold0003 (325-399)||(337121-337195)
[»] scaffold0252 (1 HSPs)
scaffold0252 (357-401)||(8001-8045)
[»] scaffold0041 (1 HSPs)
scaffold0041 (333-399)||(34411-34477)
[»] scaffold0020 (1 HSPs)
scaffold0020 (330-404)||(155904-155978)
[»] scaffold0154 (1 HSPs)
scaffold0154 (330-399)||(4318-4387)


Alignment Details
Target: scaffold0140 (Bit Score: 630; Significance: 0; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 630; E-Value: 0
Query Start/End: Original strand, 8 - 787
Target Start/End: Original strand, 33579 - 34357
Alignment:
Q  8 gacatcatcaaatgacatcacgggccctttctatccaaaaaagacatcacgggcccttgtcaaattagaaataaataaatcaaattacagacttacagca 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33579 gacatcatcaaatgacatcacgggccctttctatccaaaaa-gacatcacgggcccttgtcaaattagaaataaataaatcaaattacagacttacagca 33677  T
Q  108 gcatgtgnnnnnnnctaaccaaaagttataacatgtgttaaacattaacacttgtcttcaaatggagaaaggaagttatatgggtggtatttcctaagag 207  Q
    |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33678 gcatgtgtttttttctaaccaaaagttataacatgtgttaaacattaacacttgtcttcaaatggagaaaggaagttagatgggtggtatttcctaagag 33777  T
Q  208 aatagagatttgagtaatgatagtatttgtttaatgttttgtgataactttttaggcaaccttcnnnnnnnnnnnncttatggttaaaaacaa-ttgatt 306  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||            ||||||||||||||||| ||||||    
T  33778 aatagagatttgagtaatgatagtatttgttgaatgttttgtgataactttttacgcaaccttcttttttctttttcttatggttaaaaacaagttgatt 33877  T
Q  307 gaggnnnnnnnnnggta-tagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaag 405  Q
    |||          |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33878 gag--aaaaaaaaggtaatagtaggattataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttctag 33975  T
Q  406 agatttagcaaaccatttctctatgtcaaaaattgaagaggtggttacgtagtgtggtggtaacaaacatccggcatcatgataggatcaattttgcttt 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33976 agatttagcaaaccatttctctatgtcaaaaattgaagaggtggttacgtagtgtggtggtaacaaacatccggcatcatgataggatcaattttgcttt 34075  T
Q  506 tgtgaagttctttaggcacattttggaaggagaggctagattcatgtttgatcaatgtcgctgtaatgctactttaccaaacaattttatctcctacttt 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34076 tgtgaagttctttaggcacattttggaaggagaggctagattcatgtttgatcaatgtcgctgtaatgctactttaccaaacaattttatctcctacttt 34175  T
Q  606 gttaggttgatgttgaaggtggcctccccattttcatggacgaattttcagccgatatctcttcttgtttgtttatacaaattaatatcaacaatgttag 705  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  34176 gttaggttgatgttgaaggtggcctccccattttcattgacgaattttcagccgatatctcttcttgtttgtttatacagattaatatcaacaatgttaa 34275  T
Q  706 cagcgagattagctcgggttatgaatatggtggttgctaccactcaattgacttttatcaatggaagaaatttagttgatgg 787  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34276 cagcgagattagctcgggttatgaatatggtggttgctaccattcaattgacttttatcaatggaagaaatttagttgatgg 34357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 8e-20; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 6849255 - 6849329
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  6849255 agtaagaatataatgtgagtatgaaagataaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 6849329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 44380613 - 44380682
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||||||| ||||| |||||| |||| ||||||    
T  44380613 gaatataatgtgagtatgagagagaaagttgtttaaaggttgtcacaaaatggttgtacaaatatcattt 44380682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 12697716 - 12697784
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 402  Q
    ||||||||| | ||| ||| ||||||||| |||| || ||||||||||||||||||||| |||||||||    
T  12697716 ataatgtgagtgtgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcatttttc 12697784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 36497723 - 36497664
Alignment:
Q  340 tgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  36497723 tgaatatgagagagaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcattt 36497664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 6005021 - 6004947
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| ||| |||||||| |||| ||||||    
T  6005021 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcattt 6004947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 12045647 - 12045721
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  12045647 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaatatcattt 12045721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 9985681 - 9985746
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| || ||||| |||||||||||||||||||| |||| |||| ||||||    
T  9985681 ataatgtgagtatgagagagaatgttgtataaaagttgtcataaaatagatgtacaaatatcattt 9985746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 399
Target Start/End: Complemental strand, 14531679 - 14531624
Alignment:
Q  344 tatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||||||  ||||||| |||||||||||||||| |||| ||||||    
T  14531679 tatgaaagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcattt 14531624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 387
Target Start/End: Complemental strand, 30578331 - 30578269
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 387  Q
    |||| |||||||| |||| ||||| | | ||||||||||||||||||||| ||||| ||||||    
T  30578331 agtaagaatataacgtgagtatgagaaagaaagttgtttaaaagttgtcaaaaaatggttgta 30578269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 35500959 - 35501021
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||| |||||||||||||  |||||||||| ||| | ||||||||||| ||||||    
T  35500959 atgtgagtatgagagataaagttgttataaagttgtcaaaaagtggttgtataaatatcattt 35501021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 40380346 - 40380284
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||| ||| ||||||||  ||||||||||||||||||| |||| |||| ||||||    
T  40380346 atgtgagtatgagagagaaagttgtacaaaagttgtcataaaatagatgtacaaatatcattt 40380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 40465028 - 40464966
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 392  Q
    ||||||||||||| ||||| ||| ||||||||  |||| || ||||||| |||||||||||||    
T  40465028 gaatataatgtgagtatgagagagaaagttgtcaaaaatttatcataaagtagttgtataaat 40464966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 6162016 - 6161951
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||||||| | ||||||  ||| ||||||||||||| |||||| |||| ||||||    
T  6162016 ataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatggttgtacaaatatcattt 6161951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 14228772 - 14228707
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 402  Q
    |||||| ||||| ||| ||||||||  ||||||| ||| |||||||||||| |||| |||||||||    
T  14228772 atgtgagtatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttttc 14228707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 21648934 - 21648999
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| ||||||||| ||||||||||| ||| | |||||| |||| ||||||    
T  21648934 ataatgtgagtatgagagagaaagttgttaaaaagttgtcacaaattggttgtacaaatatcattt 21648999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 27630969 - 27630900
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||  |||| |||||||||||| | |||| |||| ||||||    
T  27630969 gaatataatgtgagtatgagagagaaagttgtcaaaaaattgtcataaaatggatgtacaaatatcattt 27630900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 31731450 - 31731491
Alignment:
Q  358 ttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| |||||||||||||| ||||||||||||| ||||||    
T  31731450 ttgtttcaaagttgtcataaattagttgtataaatatcattt 31731491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 392
Target Start/End: Original strand, 33415711 - 33415772
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 392  Q
    |||||||||||| ||| ||||| | ||||||  || ||||||||||||||||||||| ||||    
T  33415711 aatataatgtgagtataaaagagagagttgtcaaagagttgtcataaaatagttgtacaaat 33415772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 37562140 - 37562209
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||| || ||||| ||| |||||||| |||||||||||| | |||||||||| |||| ||||||    
T  37562140 gaatatcatgcgagtatgagagagaaagttgtctaaaagttgtcacataatagttgtacaaatatcattt 37562209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 42012593 - 42012658
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| |||| ||||| ||| ||||||||  ||||||| ||||||| ||||||||||||| ||||||    
T  42012593 ataacgtgagtatgagagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcattt 42012658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 8e-20; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 29803302 - 29803228
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  29803302 agtaagaatataatgtgaatatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcattt 29803228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 41460188 - 41460114
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||  |||||||||| |||||| ||||    
T  41460188 gaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtataaatatcatttctcaa 41460114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 17063936 - 17063868
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||  ||||| |||| ||||||    
T  17063936 aatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 17063868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 7144654 - 7144580
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||| ||| ||||| ||| ||||||||||||||||| ||||||||| |||||| |||| ||||||    
T  7144654 agtaagaatataatatgagtatgagagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcattt 7144580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 38690968 - 38691022
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 387  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||| |||||    
T  38690968 tataatgtgaatatgaaagagaaagttgtttaaaaattgtcacaaaataattgta 38691022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 26627402 - 26627333
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||||||| |||||||| |||||||||  | |||||||||||| |||| ||||||    
T  26627402 gaatataatgtgagtatgaaagagaaagttgtctaaaagttgataaaaaatagttgtacaaatatcattt 26627333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 15639462 - 15639383
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| |||||| ||||    
T  15639462 agtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaccaaatggttgtacaaatatcatttctcaa 15639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 3960168 - 3960218
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||| |||||    
T  3960168 gaatataatgtgagtatgagatataaagttgtttaaaagttgtcaaaaaat 3960218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 12718383 - 12718453
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||||||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  12718383 ataatgtgaatatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcaa 12718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 582866 - 582935
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||| ||||| ||| ||| ||||||||||||| ||| |||||||||||| |||| ||||||    
T  582866 gaatataatatgagtatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcattt 582935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 5996739 - 5996670
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||| ||| ||| |||| ||||| |||| | |||||||||||| |||| ||||||    
T  5996739 gaatataatgtgaatatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcattt 5996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 19437329 - 19437272
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 387  Q
    ||||||||||||||||||| ||| ||||||||||||| ||| ||| ||||| ||||||    
T  19437329 gaatataatgtgaatatgagagagaaagttgtttaaaggttatcacaaaatggttgta 19437272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 327 - 399
Target Start/End: Original strand, 16292245 - 16292316
Alignment:
Q  327 taggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||||| | ||||||||| ||||||||| ||||||| |||| ||||| ||||| |||| ||||||    
T  16292245 taggaatataatgtaagtatgaaagagaaagttgttaaaaagttatcat-aaataattgtacaaatatcattt 16292316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 392
Target Start/End: Original strand, 32379935 - 32379990
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 392  Q
    |||||| ||||| ||| ||||||||| ||||||||||||||| |||||||| ||||    
T  32379935 atgtgagtatgagagagaaagttgttcaaaagttgtcataaactagttgtacaaat 32379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 12779609 - 12779679
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  12779609 ataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcaa 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 14914437 - 14914375
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||| |||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  14914437 atgtgaatatgtaagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcattt 14914375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 20040865 - 20040792
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||||| | |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  20040865 agtaagaatataatgtgagtatgaaaaagaaagttgtgtaaaagttgtcactaaat-gttgtacaaatatcattt 20040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 34428237 - 34428163
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| |||| |||||||| ||| | | | |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  34428237 agtaagaatctaatgtgagtataagaaaaaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 34428163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 1108049 - 1107984
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||||||||||||  ||||||||| | |||||||| ||| |||| ||||||    
T  1108049 ataatgtgagtatgagagataaagttgtacaaaagttgtaacaaaatagtcgtacaaatatcattt 1107984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 2456098 - 2456029
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| | | ||||||||  |||| |||| |||||||||||||||| || ||||||    
T  2456098 gaatataatgtgagtatgagatagaaagttgtcaaaaaattgttataaaatagttgtatagatatcattt 2456029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 3154649 - 3154710
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 398  Q
    |||||| ||||| ||| ||||||||  ||||||| |||||||||||||||| |||| |||||    
T  3154649 atgtgattatgagagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 6538938 - 6538873
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||| ||||||||  |||| || ||| |||||| ||||| |||| ||||||    
T  6538938 ataatgtgaatatgaaagagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcattt 6538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 8897450 - 8897385
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||||||| | ||||||  ||| ||||||||||||| |||||| |||| ||||||    
T  8897450 ataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatggttgtacaaatatcattt 8897385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 18638824 - 18638893
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||||||| ||||  ||||||||| ||||||| |||||  |||| ||||||    
T  18638824 gaatataatgtgagtatgagagataaatttgtcaaaaagttgtaataaaatggttgtgcaaatatcattt 18638893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 31025004 - 31025073
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||| |||| |||||||||  | |||||| |||| ||||||    
T  31025004 gaatataatgtgagtatgagagagaaagttgttaaaaaattgtcataatgtggttgtacaaatatcattt 31025073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 34400690 - 34400621
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| || |||||| |||| ||||||||||||  ||||| |||| ||||||    
T  34400690 gaatataatgtgagtatgagagagaaggttgttaaaaaattgtcataaaatgattgtacaaatatcattt 34400621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 36572759 - 36572694
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||||||| | ||||||  ||||||||||| ||||||||| || |||| ||||||    
T  36572759 ataatgtgagtatgaaagagagagttgtcaaaaagttgtcacaaaatagttatacaaatatcattt 36572694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 39032821 - 39032862
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgt 372  Q
    |||||||| ||| ||||||| |||||||||||||||||||||    
T  39032821 aatataatatgagtatgaaaaataaagttgtttaaaagttgt 39032862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 44272804 - 44272878
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  44272804 agtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcattt 44272878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 11012212 - 11012144
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||| | ||||| ||||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  11012212 aatataatgtaagtatgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcattt 11012144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 42854010 - 42853942
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  42854010 aatataatgtgagtatgatagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 42853942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 23220406 - 23220333
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||||||||||| ||| | |||||||||| |||||||||||||| ||||| |||||| |||| |||||| ||||    
T  23220406 aatataatgtgagtataagagataaagttatttaaaagttgtcaaaaaatggttgtacaaatatcatttctcaa 23220333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 3475934 - 3475872
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||| ||| ||||||||  ||||||||||||||||| |||||| |||| ||||||    
T  3475934 atgtgaatatgagagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcattt 3475872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 18874916 - 18874989
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  18874916 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaat-gttgtacaaatatcattt 18874989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 23094453 - 23094379
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||| ||| |||||  ||||| |||| ||||||    
T  23094453 agtaagaatataatgtaaatatgaaagagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcattt 23094379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 399
Target Start/End: Complemental strand, 35017222 - 35017156
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||| | ||||| ||||||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  35017222 tataatgttagtatgagagataaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcattt 35017156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 47014996 - 47014942
Alignment:
Q  345 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  47014996 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcattt 47014942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 54801075 - 54801001
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||||||||||| |||| |||||||| ||| ||| | |||||| |||| ||||||    
T  54801075 agtaagaatataatgtgagtatgaaagataaaattgtctaaaagttatcacaaagtggttgtacaaatatcattt 54801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 392
Target Start/End: Complemental strand, 8455932 - 8455871
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 392  Q
    |||||||||||| ||| | ||| ||||||||| ||||||||||| |||||||||||| ||||    
T  8455932 aatataatgtgagtattagagagaaagttgttcaaaagttgtcacaaaatagttgtacaaat 8455871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 41609682 - 41609747
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||||||||||||  ||||||||||||||||| | |||| |||| ||||||    
T  41609682 ataatgtgagtatgagagataaagttgtacaaaagttgtcataaaatggatgtacaaatatcattt 41609747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 51039119 - 51039184
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| |||||||| |||| ||||||    
T  51039119 ataatgtgattatgagagataaagttgtcaaaaagttgtcacaaagtagttgtacaaatatcattt 51039184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 12074518 - 12074470
Alignment:
Q  356 agttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||| |||| || ||||||||||||||||||||| |||||||||||    
T  12074518 agttgttcaaaaattatcataaaatagttgtataaatatcatttttcaa 12074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 37775430 - 37775494
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 398  Q
    ||||||||  ||||||||| ||||||||  ||||||||| |||||||||||||| |||| |||||    
T  37775430 ataatgtgtgtatgaaagagaaagttgtacaaaagttgtaataaaatagttgtagaaatatcatt 37775494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 46567008 - 46566932
Alignment:
Q  323 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | | |||| |||| ||||||    
T  46567008 atagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggatgtacaaatatcattt 46566932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 404
Target Start/End: Original strand, 925068 - 925135
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||||| ||||| ||| ||| |||| |||||||||||| ||||| ||||||||||| |||||| ||||    
T  925068 atgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtataaatatcatttatcaa 925135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 402
Target Start/End: Complemental strand, 52430916 - 52430877
Alignment:
Q  363 taaaagttgtcataaaatagttgtataaatgtcatttttc 402  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  52430916 taaaagttgtcataaaatagttgtacaaatatcatttttc 52430877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 14090049 - 14090123
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||| |||||||| ||||| ||| |||||||||||||||||||   ||||| |||| |||||| |||||| ||||    
T  14090049 gaatctaatgtgagtatgagagagaaagttgtttaaaagttgtacaaaaatggttggataaatatcatttctcaa 14090123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 25523201 - 25523271
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| |||||| ||||    
T  25523201 ataatgtgagtatgagagagaaagttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttctcaa 25523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 25936304 - 25936250
Alignment:
Q  338 tgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 392  Q
    ||||| ||||| ||| ||||||||  ||||||||||| |||||||||||||||||    
T  25936304 tgtgagtatgagagagaaagttgtgcaaaagttgtcaaaaaatagttgtataaat 25936250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 34114116 - 34114190
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||||||| |||| ||||| ||| ||||||||  ||||||| | |||||||||||||| |||| |||||| ||||    
T  34114116 gaatataacgtgagtatgagagaaaaagttgtcaaaaagttataataaaatagttgtacaaatatcatttatcaa 34114190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 365 - 399
Target Start/End: Original strand, 45764422 - 45764456
Alignment:
Q  365 aaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||||||||||||||||||| ||||||    
T  45764422 aaagttgtcataaaatagttgtataaatatcattt 45764456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 403
Target Start/End: Original strand, 51908577 - 51908647
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgt-ttaaaagttgtcataaaatagttgtataaatgtcatttttca 403  Q
    ||||||||||||||||||| ||||||||  | |||||||||| ||| || ||||| |||| ||||||||||    
T  51908577 ataatgtgaatatgaaagagaaagttgtcattaaagttgtcacaaattaattgtacaaatatcatttttca 51908647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 12241126 - 12241061
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  12241126 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 12241061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 12694433 - 12694498
Alignment:
Q  336 aatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattttt 401  Q
    ||||||||||||| ||| |||||| |  ||||||||||| ||||| |||||| |||| ||||||||    
T  12694433 aatgtgaatatgagagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcattttt 12694498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 18568815 - 18568888
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||| |||||| ||| | ||| ||||||||  ||||||||||| ||||| ||||||||||| |||||| ||||    
T  18568815 aatatcatgtgagtataagagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttctcaa 18568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 18880857 - 18880800
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 387  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||| ||||||||| ||||||    
T  18880857 gaatataatgtgagtatgagagagaaaattgtctaaaagttatcataaaattgttgta 18880800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 22071564 - 22071499
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||| | ||||||  |||||||||||  ||||| ||||| |||| ||||||    
T  22071564 ataatgtgaatatgaaagagatagttgtcaaaaagttgtcactaaataattgtacaaatatcattt 22071499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 24337358 - 24337399
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtca 374  Q
    |||||||||| ||||| ||||||||||||| |||||||||||    
T  24337358 tataatgtgagtatgagagataaagttgttaaaaagttgtca 24337399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 33820339 - 33820404
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  33820339 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 33820404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 46912798 - 46912867
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||| |||| |||| ||||| | |||||| |||| ||||||    
T  46912798 gaatataatgtgagtatgagagagaaagttgttaaaaaattgtaataaagtggttgtacaaatatcattt 46912867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 37134605 - 37134679
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||| |||||| ||||    
T  37134605 gaatataatatgaatatgaaagagaaagttgttaaaaaattgtcataaaatagttgtacaaatatcatttctcaa 37134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 45150260 - 45150334
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||||| | ||||||    
T  45150260 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatagttgtataagtatcattt 45150334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 7867705 - 7867779
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| | | ||| ||||||||||||||||| |||||||||||| |||| ||||||    
T  7867705 agtaagaatataatgtgagtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcattt 7867779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 36869831 - 36869905
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  36869831 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatggttgtacaaatatcattt 36869905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 36799470 - 36799401
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| | ||||| ||||||||||||| ||| |||||||||||| |||| ||||||    
T  36799470 gaatataatgtgagtatgagaaataaaattgtttaaaagttatcaaaaaatagttgtacaaatatcattt 36799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 40785691 - 40785747
Alignment:
Q  323 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 379  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||||||||| ||||    
T  40785691 atagtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaa 40785747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 404
Target Start/End: Original strand, 50280093 - 50280160
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||| |||||| |||| |||||| ||||    
T  50280093 atgtgaatatgaaagagaaagttgtacaaaagttgtcatagaatggttgtacaaatatcatttctcaa 50280160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 1295409 - 1295335
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| ||||||||  ||||||| ||| |||||||||||| |||| ||||||    
T  1295409 agtaagaatataatgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcattt 1295335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 1901920 - 1901994
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  1901920 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 1901994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 1911366 - 1911440
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  1911366 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 1911440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 399
Target Start/End: Original strand, 28300650 - 28300716
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||||||| ||| ||||||||| ||||||||||||||| | |||||| |||| ||||||    
T  28300650 tataatatgaatatgagagagaaagttgttaaaaagttgtcataaagtggttgtacaaatatcattt 28300716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 462400 - 462469
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||| |||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  462400 gaatataacgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcattt 462469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 12094388 - 12094457
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| | | || || |||| |||||||||||||||||||||||| ||||||    
T  12094388 gaatataatgtgagtatgagagagacattttttaaaaaattgtcataaaatagttgtataaatatcattt 12094457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 14957905 - 14957834
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||||||||||||||| ||| ||| ||||| ||||||||||| ||| | |||||| |||| |||||| ||||    
T  14957905 tataatgtgaatatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 14957834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 404
Target Start/End: Original strand, 50294106 - 50294185
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||| ||||||||||||| | ||| ||||||| ||||||||||||||||  ||| | |||||| |||| |||||| ||||    
T  50294106 agtaagaatataatgtgagtgtgagagataaaattgtttaaaagttgtcgcaaagtggttgtacaaatatcatttctcaa 50294185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 275303 - 275229
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| |||| |||| |||||| ||||||||||||||  ||||  ||||| |||| ||||||    
T  275303 agtaagaatataatgtgagtatggaagagaaagttttttaaaagttgtcaataaatgattgtacaaatatcattt 275229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 41717340 - 41717266
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| |||||||| |||| ||||| | | |||||||||||||||||||||  ||||| ||||| |||| ||||||    
T  41717340 agtaagaatataacgtgagtatgagatagaaagttgtttaaaagttgtcactaaataattgtacaaatatcattt 41717266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 45528936 - 45529010
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| |||| |||||||| ||||| | | ||| |||| |||||||||||| |||||||||||| |||| ||||||    
T  45528936 agtaagaatctaatgtgagtatgagaaagaaatttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 45529010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 51464275 - 51464345
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| ||| | |||||| |||| |||||| ||||    
T  51464275 ataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 51464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 7213 - 7282
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||||| |||||  ||||| |||| ||||||    
T  7213 gaatataatgtgagtatgagagagaaagttgtccaaaagttgtcagaaaatgattgtacaaatatcattt 7282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 392
Target Start/End: Original strand, 622460 - 622521
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 392  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||||| |||||| ||||    
T  622460 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaat 622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 392
Target Start/End: Original strand, 32981121 - 32981182
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 392  Q
    |||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| ||||    
T  32981121 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaat 32981182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 35425671 - 35425728
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgta 387  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||| ||||| | ||||||    
T  35425671 gaatataatgtgagtatgagagataaagttgtcaaaaagttgtaataaagtggttgta 35425728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 42102309 - 42102260
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 379  Q
    ||||||||| ||| ||||  ||||||||||||||||||||||||| ||||    
T  42102309 gaatataatctgagtatgtgagataaagttgtttaaaagttgtcaaaaaa 42102260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 43333670 - 43333719
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    |||||||||||| ||||||||| | ||||||  |||||||||||||||||    
T  43333670 aatataatgtgagtatgaaagagagagttgtcaaaaagttgtcataaaat 43333719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 43900756 - 43900825
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||| ||||| | |||||| |||| ||||||    
T  43900756 gaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcattt 43900825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 47988488 - 47988553
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  47988488 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 47988553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 47997775 - 47997840
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  47997775 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 47997840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 48007062 - 48007127
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| ||||||||  ||||||||| | |||||||||||| |||| ||||||    
T  48007062 ataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcattt 48007127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 52678576 - 52678645
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||||||| ||||||||  |||| || | | ||| | |||||| |||||||||||    
T  52678576 gaatataatgtgaatatgaaagagaaagttgtcaaaaaattattagaaattggttgtacaaatgtcattt 52678645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 20268512 - 20268586
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||| ||||| ||||||||||||||||| |||| |||| |||||||||||||| |||| |||||||||||    
T  20268512 gaatataatatgaatgtgaaagataaagttgttaaaaaattgttataaaatagttgtacaaatatcatttttcaa 20268586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 30530574 - 30530642
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  30530574 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcattt 30530642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 40238515 - 40238441
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||||||||| |||||  ||||| |||| ||||||    
T  40238515 agtaagaatataatgtgaatatgagagaaaaaattgtttaaaagttgtcaaaaaatgattgtacaaatatcattt 40238441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 325 - 398
Target Start/End: Complemental strand, 5043169 - 5043096
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 398  Q
    |||| ||||||||||||||||||||||| |||||| ||||||| || ||| |||||| ||||| |||| |||||    
T  5043169 agtaagaatataatgtgaatatgaaagagaaagttatttaaaaattatcacaaaataattgtacaaatatcatt 5043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 23554823 - 23554754
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| |||||||||||||||||| || ||| ||||| |||||| |||| ||||||    
T  23554823 gaatataatgtgagtatgagagataaagttgtttaaaaattatcaaaaaatggttgtacaaatatcattt 23554754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 31184352 - 31184284
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||| |||  |||| ||||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  31184352 aatataatttgagcatgagagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcattt 31184284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 32821712 - 32821632
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaag 405  Q
    |||| ||||||||||||| ||||| ||| ||| ||||||||||||||||| ||| | |||||| |||| |||||| |||||    
T  32821712 agtaagaatataatgtgagtatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcatttctcaag 32821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 34395919 - 34395987
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||| |||||| ||||| ||| ||||||||| ||||||||||||||||||| |||| |||| ||||||    
T  34395919 aatattatgtgagtatgagagagaaagttgttcaaaagttgtcataaaatagatgtacaaatatcattt 34395987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 47138030 - 47138090
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaa 391  Q
    |||||||||||||||||| | | ||||||||| ||||||| | ||||||||||||||||||    
T  47138030 aatataatgtgaatatgagataaaaagttgttcaaaagttataataaaatagttgtataaa 47138090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 50118896 - 50118964
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||||||||| ||||||||||||  ||||||||| ||||| | ||| ||||||| ||||||    
T  50118896 aatataatgtgaatatgagagataaagttgtcaaaaagttgtaataaagtggttatataaatatcattt 50118964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 9882653 - 9882727
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||| ||||| ||||||||| ||||||||||||  ||| ||||||| |||||||||||| |||| ||||||    
T  9882653 agtaagaacataatatgaatatgagagataaagttgtcaaaatgttgtcacaaaatagttgtacaaatatcattt 9882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 25702209 - 25702283
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| |||||||||||| || ||||||| | |||||| ||||| |||| ||||||    
T  25702209 agtaagaatataatgtgagtatgagagataaagttgtctacaagttgttaaaaaataattgtagaaatatcattt 25702283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 30687129 - 30687055
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||||||||||  |||| |||||| |||| ||||||    
T  30687129 agtaagaatataatgtgagtatgatagaaaaagttgtctaaaagttgtcactaaatggttgtacaaatatcattt 30687055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 31703481 - 31703551
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||| ||||| ||| ||||||||| |||| |||||| |||||| |||| ||||| |||||||||||    
T  31703481 ataatgtgagtatgagagagaaagttgttaaaaaattgtcaaaaaataattgtctaaatatcatttttcaa 31703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 43640984 - 43641051
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||  ||||| |||||||||||||||||||| |||| ||||| |||||| |||| ||||||    
T  43640984 gaatataatgtg--tatgagagataaagttgtttaaaagtagtcaaaaaatggttgtacaaatatcattt 43641051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 7078499 - 7078568
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| |||||| ||||| ||| ||||||||| ||||||||||| ||||||| |||| |||| ||||||    
T  7078499 gaatattatgtgagtatgagagagaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcattt 7078568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 30530398 - 30530467
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| ||||||    
T  30530398 gaatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcattt 30530467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 44950420 - 44950464
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 374  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  44950420 gaatataatgtgagtatgaaagagaaagttgttaaaaagttgtca 44950464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 48576504 - 48576576
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 402  Q
    |||||||||| |||||||| ||| |||||| |  ||||||||||||||||| ||| || |||| |||||||||    
T  48576504 gaatataatgcgaatatgagagagaaagttatcaaaaagttgtcataaaatggttatacaaatatcatttttc 48576576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 403
Target Start/End: Complemental strand, 52417602 - 52417530
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttca 403  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||| |||||||  |||| ||||||||||    
T  52417602 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtagttgtccaaatatcatttttca 52417530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 18954300 - 18954355
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgt 386  Q
    |||||||||| ||||||| ||||||||||||| |||| |||||| ||||| |||||    
T  18954300 aatataatgtaaatatgagagataaagttgttaaaaaattgtcacaaaatggttgt 18954355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 51168762 - 51168817
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    |||| ||||||||||||||||||| ||| |||||||| |||||||| ||| |||||    
T  51168762 agtaagaatataatgtgaatatgagagaaaaagttgtctaaaagttatcacaaaat 51168817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 18610838 - 18610776
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||| ||| ||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  18610838 atgtgagtatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcattt 18610776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 21255779 - 21255833
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaa 379  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||    
T  21255779 agtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaaaaaa 21255833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 372
Target Start/End: Complemental strand, 24158718 - 24158680
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgt 372  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  24158718 ataatgtgagtatgaaagataaagttgtataaaagttgt 24158680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 25988978 - 25989052
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| ||| |||| |||||||||| | ||||| |||||| |||| ||||||    
T  25988978 agtaagaatataatgtgagtatgagagagaaaattgtctaaaagttgttaaaaaatggttgtacaaatatcattt 25989052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 27352707 - 27352633
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| ||||||||  ||||||| ||| ||||| |||||| |||| ||||||    
T  27352707 agtaagaatataatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcattt 27352633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 399
Target Start/End: Complemental strand, 33675969 - 33675903
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||| ||||| ||| |||||||||  |||||||||| ||| | |||||| |||||||||||    
T  33675969 tataatgtgagtatgagagagaaagttgttacaaagttgtcaaaaagtggttgtacaaatgtcattt 33675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 6954359 - 6954310
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtca 374  Q
    |||| ||| ||||||||||||||| ||||||  |||||||||||||||||    
T  6954359 agtaagaacataatgtgaatatgagagataatattgtttaaaagttgtca 6954310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 11097883 - 11097952
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| |||||| ||||| ||| ||||||||| ||||||||||| ||||| | |||| |||| ||||||    
T  11097883 gaatattatgtgagtatgagagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcattt 11097952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 18541054 - 18541119
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||| ||| ||||||||  ||||||||| | ||||| |||||| |||| ||||||    
T  18541054 ataatgtgaatatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcattt 18541119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 26547306 - 26547237
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| |||||||||||| ||| ||||||||| |||| |||||| ||||||  |||| |||| ||||||    
T  26547306 gaatattatgtgaatatgagagagaaagttgttcaaaaattgtcacaaaatatatgtacaaatatcattt 26547237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 30439318 - 30439253
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||||||||||||  |||| |||||||||| | |||||| |||| ||||||    
T  30439318 ataatgtgagtatgagagataaagttgtcaaaaaattgtcataaattggttgtacaaatatcattt 30439253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 34941912 - 34941969
Alignment:
Q  323 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    |||||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| |||||    
T  34941912 atagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaaat 34941969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 36930748 - 36930824
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 402  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||| ||| |||||  ||||| |||| |||||||||    
T  36930748 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagtt-tcacaaaatgattgtacaaatatcatttttc 36930824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 49596307 - 49596238
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||  |||| |||| ||||||| |||||| |||| ||||||    
T  49596307 gaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaaatggttgtacaaatatcattt 49596238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 8e-17; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 37392115 - 37392046
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||| |||| ||||||    
T  37392115 gaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatggttgtacaaatatcattt 37392046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 325 - 406
Target Start/End: Complemental strand, 26123444 - 26123362
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtc-ataaaatagttgtataaatgtcatttttcaaga 406  Q
    |||| ||||||||||||||||||| ||| |||||||| ||||||||||| | |||||||||||| |||| ||||| |||||||    
T  26123444 agtaagaatataatgtgaatatgagagagaaagttgtctaaaagttgtcaaaaaaatagttgtacaaatatcattcttcaaga 26123362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 4971369 - 4971293
Alignment:
Q  323 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  4971369 atagtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcattt 4971293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 40760770 - 40760841
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||| ||||| |||||||||||  |||||||| ||||||| ||| ||||||||||||||||| |||||||||||    
T  40760770 aatacaatgtaaatatgaaaga--aagttgttcaaaagttatcacaaaatagttgtataaatatcatttttcaa 40760841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 22692156 - 22692087
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||| | ||||| ||| ||| ||||||||||||||||||||||| |||||| |||| ||||||    
T  22692156 gaatataatgtaagtatgagagagaaaattgtttaaaagttgtcataaaatggttgtacaaatatcattt 22692087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 28110028 - 28109955
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    |||||||||||| ||||  ||||||||||||||||||||||||| ||| | |||||| |||| |||||| ||||    
T  28110028 aatataatgtgagtatgtgagataaagttgtttaaaagttgtcaaaaagtggttgtacaaatatcatttctcaa 28109955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 34304672 - 34304749
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 402  Q
    |||| ||||||||||||| ||||| ||| ||| |||| ||||| |||||| |||||||||||| |||| |||||||||    
T  34304672 agtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcatttttc 34304749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 45154539 - 45154607
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||||||| |||||| | |||||||||||| |||||||||||| |||| ||||||    
T  45154539 gaatataatgtgagtatgaaagagaaagttatctaaaagttgtca-aaaatagttgtacaaatatcattt 45154607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 40693528 - 40693596
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||| | ||||| ||| |||||||| |||||||||||| |||||||||||| |||| ||||||    
T  40693528 aatataatgtaagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcattt 40693596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 44187768 - 44187713
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    |||| ||||||||||||| ||||| | ||||||||||||||||||||||| |||||    
T  44187768 agtaagaatataatgtgagtatgagaaataaagttgtttaaaagttgtcaaaaaat 44187713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 8061738 - 8061812
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||||||||||||| ||| || | ||||| || ||||||||| |||||| |||| ||||||    
T  8061738 agtaagaatataatgtgaatatgaaagagaaaattatctaaaatttttcataaaatggttgtagaaatatcattt 8061812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 42640911 - 42640841
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||| |||| |||| ||||||||  ||||||||| | |||||||||||| |||| |||||||||||    
T  42640911 ataatgtgagtatgtaagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttttcaa 42640841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 26153717 - 26153649
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||| ||||  |||||||||||||||||||||||| |||| ||||||    
T  26153717 gaatataatgtgagtatgagagagaaaattgtc-aaaagttgtcataaaatagttgtacaaatatcattt 26153649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 44564722 - 44564790
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||||| | |||||||| ||||| |||||| |||||||||||| |||| ||||||    
T  44564722 gaatataatgtgagtatgaaataaaaagttgtctaaaaattgtca-aaaatagttgtacaaatatcattt 44564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 5724110 - 5724042
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 398  Q
    ||||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| |||||    
T  5724110 gaatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatt 5724042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 5868301 - 5868373
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 402  Q
    |||||| |||||| ||| ||||| ||||||||| ||||||||| | |||||||||||| |||| || ||||||    
T  5868301 gaatatcatgtgagtataaaagaaaaagttgttcaaaagttgttacaaaatagttgtacaaatatcgtttttc 5868373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 43107681 - 43107637
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcat 375  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||    
T  43107681 aatataatgtgagtatgagagataaagttgtctaaaagttgtcat 43107637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 5978648 - 5978601
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    |||||||||| ||||||||| ||| ||||| |||||||||||||||||    
T  5978648 tataatgtgagtatgaaagagaaaattgttaaaaagttgtcataaaat 5978601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 403
Target Start/End: Original strand, 18925991 - 18926067
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttca 403  Q
    |||| ||||||||||||| ||||| ||| ||||||||| ||||||||||  |||| | ||||| |||| ||||||||||    
T  18925991 agtaagaatataatgtgagtatgagagagaaagttgttcaaaagttgtc--aaaaaaattgtacaaatatcatttttca 18926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 399
Target Start/End: Complemental strand, 28824572 - 28824506
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||||||| ||| ||||||||  ||||||||||| ||| | |||||| |||| ||||||    
T  28824572 tataatgtgaatatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcattt 28824506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 30769664 - 30769727
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||||||||||||  |||||||||  ||||||||||||| |||| ||||||    
T  30769664 ataatgtgagtatgagagataaagttgtcaaaaagttgt--taaaatagttgtacaaatatcattt 30769727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 37385239 - 37385301
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||| ||| ||||||||  ||||||||||| |||||||||||| |||| ||||||    
T  37385239 atgtgagtatgagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcattt 37385301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 380
Target Start/End: Complemental strand, 46148238 - 46148188
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    ||||||||||||| ||||| ||||||| |||||| |||||||||| |||||    
T  46148238 gaatataatgtgagtatgagagataaacttgtttcaaagttgtcaaaaaat 46148188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 47530305 - 47530359
Alignment:
Q  345 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||| ||| ||||| ||||||||||||||||| ||||||||||| ||||||    
T  47530305 atgagagagaaaattgttcaaaagttgtcataaaatggttgtataaatatcattt 47530359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 16567388 - 16567319
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||||||| ||| ||||  ||||||| | ||||||| |||||| |||| ||||||    
T  16567388 gaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcattt 16567319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 16598274 - 16598343
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||||||| ||| ||||  ||||||| | ||||||| |||||| |||| ||||||    
T  16598274 gaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcattt 16598343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 17500769 - 17500700
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||||||||||||  ||||||| | ||||| | |||||| |||| ||||||    
T  17500769 gaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcattt 17500700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 17552445 - 17552514
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||||||||||||  ||||||| | ||||| | |||||| |||| ||||||    
T  17552445 gaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcattt 17552514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 19426648 - 19426583
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  19426648 ataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcattt 19426583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 12044403 - 12044335
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||| ||||| ||| |||||||| |||||||||||| ||||||||||||||||| ||||||    
T  12044403 aatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtataaatatcattt 12044335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 9188938 - 9189012
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| |||||||||||| |||||||||| | ||||| |||||| |||| ||||||    
T  9188938 agtaagaatataatgtgagtatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcattt 9189012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 32729966 - 32729892
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||||| |||||| |||| ||||||    
T  32729966 agtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcagaaaatggttgtacaaatatcattt 32729892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 325 - 392
Target Start/End: Complemental strand, 30744314 - 30744247
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaat 392  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||||| ||||| ||||| |||||| ||||    
T  30744314 agtaagaatataatgtgagtatgagagacaaagttgtttaaaaggtgtcacaaaatggttgtacaaat 30744247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 14803376 - 14803428
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgt 386  Q
    ||||||||| ||||||||| | ||||||| ||||||||||| |||||||||||    
T  14803376 ataatgtgagtatgaaagagagagttgttaaaaagttgtcacaaaatagttgt 14803428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 20712145 - 20712070
Alignment:
Q  323 atagtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||||||||||  ||||| ||| |||||||| |||||||||| | |||||||||||| |||| ||||||    
T  20712145 atagtaagaatataatgtgcgtatgagagagaaagttgtctaaaagttgtta-aaaatagttgtacaaatatcattt 20712070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 35077190 - 35077126
Alignment:
Q  336 aatgtgaatatgaaagataaagttgtt-taaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||| |||||  |||| ||||||    
T  35077190 aatgtgagtatgaaagataaagttgttataaaagttgtcaaaaaattgttgttcaaatatcattt 35077126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 6435101 - 6435039
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||| |||||||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  6435101 atgtgagtatgagagataaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 6435039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 29376721 - 29376783
Alignment:
Q  337 atgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||| ||||| ||| ||||||||| ||||||||||| ||||| |||||| |||| ||||||    
T  29376721 atgtgactatgatagagaaagttgttaaaaagttgtcacaaaatggttgtaaaaatatcattt 29376783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 11785427 - 11785358
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||| | | ||||||||  |||| |||||| ||||| |||||| |||| ||||||    
T  11785427 gaatataatgtgaatatgagatagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcattt 11785358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 21506404 - 21506339
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||| ||||| ||| ||||||||  ||||||||||| ||||| |||||| |||| ||||||    
T  21506404 ataatgtgagtatgagagagaaagttgtcaaaaagttgtcaaaaaatggttgtacaaatatcattt 21506339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 1052490 - 1052564
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||| | ||||| |||||| |||| ||||||    
T  1052490 agtaagaatataatgtgaatatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcattt 1052564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 9202519 - 9202584
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||| ||||||||  |||| |||||||||||| |||||| |||| ||||||    
T  9202519 ataatgtgaatatgaaagagaaagttgtcaaaaaattgtcataaaatggttgtagaaatatcattt 9202584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 36816419 - 36816484
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||| | ||||||  |||| || ||||||||||||||||||||| ||||||    
T  36816419 ataatgtgaatatgaaagagagagttgtcaaaaaattatcataaaatagttgtataaatatcattt 36816484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 6742404 - 6742459
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    |||| ||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  6742404 agtaagaagataatgtgaatatgaaagagaaagttgttcaaaagttgtcacaaaat 6742459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 333 - 399
Target Start/End: Complemental strand, 14714055 - 14713989
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||| ||||| ||| || |||||||||||||||||||||||| | |||| |||| ||||||    
T  14714055 tataatgtgagtatgagagagaatgttgtttaaaagttgtcataaaattgatgtacaaatatcattt 14713989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 23358573 - 23358647
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||| | ||||| || |||||||| ||||||    
T  23358573 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgttaaaaaattgtagtataaatatcattt 23358647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 30856884 - 30856810
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||||| ||| | |||||| |||| ||||||    
T  30856884 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcattt 30856810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 36763518 - 36763591
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||||||| |||||||| |||||||| ||| |||| ||||||| |||| ||||||    
T  36763518 agtaagaatataatgtgagtatgaaagagaaagttgtataaaagttatca-aaaaaagttgtacaaatatcattt 36763591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 43621961 - 43622015
Alignment:
Q  344 tatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatt 398  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||    
T  43621961 tatgagagagaaagttgttcaaaagttgtcataaaatagttgtacaaatatcatt 43622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 3299128 - 3299173
Alignment:
Q  354 aaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||    
T  3299128 aaagttgtttaaaagttgtcataaaatggttgtacaaatatcattt 3299173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 546385 - 546453
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||| ||||| ||| ||||||||| ||||||||| ||||| | |||||| |||| ||||||    
T  546385 aatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcattt 546453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 399
Target Start/End: Original strand, 7497991 - 7498059
Alignment:
Q  331 aatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||||| ||||| ||| ||||||||  ||||||||| ||||||| |||||| |||| ||||||    
T  7497991 aatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcattt 7498059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 35965647 - 35965575
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttc 402  Q
    ||||||||||||| ||||||||| ||||||||  |||| |||| ||||| | |||||| |||| |||||||||    
T  35965647 gaatataatgtgagtatgaaagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttttc 35965575  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 8352912 - 8352838
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| ||| |||| |||||||| | | |||||||||||| |||| ||||||    
T  8352912 agtaagaatataatgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcattt 8352838  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 14954598 - 14954648
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaat 380  Q
    |||||| |||||||||||| ||| ||||||||| ||||||||||| |||||    
T  14954598 gaatattatgtgaatatgagagagaaagttgttcaaaagttgtcacaaaat 14954648  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 15283244 - 15283318
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||||| ||||| |||||| ||| | |||||| |||| ||||||    
T  15283244 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcattt 15283318  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 28165201 - 28165127
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||||||| ||||| |||||| || | |||||| ||||    
T  28165201 gaatataatgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtacaagtatcatttctcaa 28165127  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 39147834 - 39147780
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtt-taaaagttgtcataaaatagttgta 387  Q
    ||||||||||||||||||| |||||||||  ||||||||| | ||||||||||||    
T  39147834 ataatgtgaatatgaaagagaaagttgttacaaaagttgtaaaaaaatagttgta 39147780  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 2308321 - 2308390
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||||||||||||  ||| ||||||| ||| | |||||| |||| ||||||    
T  2308321 gaatataatgtgagtatgagagataaagttgtcaaaaggttgtcaaaaattggttgtacaaatatcattt 2308390  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 3959966 - 3959897
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||| |||| |||||||||||| ||||  |||||| |||| ||||||    
T  3959966 gaatataatgtgagtatgagagagaaaattgtgtaaaagttgtcaaaaaaaggttgtacaaatatcattt 3959897  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 399
Target Start/End: Complemental strand, 6746285 - 6746220
Alignment:
Q  334 ataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||| ||||||||| ||| ||| ||||| ||||||||| | ||| ||||||||||||| ||||||    
T  6746285 ataatatgaatatgagagagaaaattgttaaaaagttgttaaaaattagttgtataaatatcattt 6746220  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 22303248 - 22303199
Alignment:
Q  357 gttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaaga 406  Q
    |||||| ||||||||||| |||||||||||| |||| |||||| ||||||    
T  22303248 gttgttcaaaagttgtcaaaaaatagttgtacaaatatcatttctcaaga 22303199  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 42554848 - 42554779
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| ||| ||||||||  ||||||||| ||||| | |||||| |||| ||||||    
T  42554848 gaatataatgtgagtatgagagagaaagttgtaaaaaagttgtaataaagtggttgtacaaatatcattt 42554779  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 60541 - 60472
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||||||||||||| ||||||||  ||||||||| ||||||| |||||| |||| ||||||    
T  60541 gaatataatgtgaatatgaaagaaaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcattt 60472  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 440795 - 440721
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||| ||||||| ||||| ||| |||||||| |||||||||||||||| |||||||| |||| ||||||    
T  440795 agtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcataaagtagttgtacaaatatcattt 440721  T

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Target: scaffold0662 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 1135 - 1081
Alignment:
Q  345 atgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  1135 atgagagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcattt 1081  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 337195 - 337121
Alignment:
Q  325 agtaggaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||| ||||||||||||| ||||| ||| |||||| || ||||||||||| ||||| |||||| |||| ||||||    
T  337195 agtaagaatataatgtgagtatgagagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcattt 337121  T

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Target: scaffold0252 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 357 - 401
Target Start/End: Original strand, 8001 - 8045
Alignment:
Q  357 gttgtttaaaagttgtcataaaatagttgtataaatgtcattttt 401  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||    
T  8001 gttgttcaaaagttgtcataaaatggttgtataaatatcattttt 8045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 399
Target Start/End: Complemental strand, 34477 - 34411
Alignment:
Q  333 tataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    |||||||||| ||||| ||| ||||||||   |||||||||| |||||||||||| |||| ||||||    
T  34477 tataatgtgagtatgagagagaaagttgtcacaaagttgtcaaaaaatagttgtacaaatatcattt 34411  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 155978 - 155904
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcatttttcaa 404  Q
    ||||||||||||| || || ||| ||||||||  ||||||||| ||||||| |||||| |||| |||||| ||||    
T  155978 gaatataatgtgagtacgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcaa 155904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 4387 - 4318
Alignment:
Q  330 gaatataatgtgaatatgaaagataaagttgtttaaaagttgtcataaaatagttgtataaatgtcattt 399  Q
    ||||||||||||| ||||| | | ||||||||  ||||||| ||||||||| |||||| |||| ||||||    
T  4387 gaatataatgtgagtatgagatagaaagttgtcaaaaagttatcataaaatggttgtacaaatatcattt 4318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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