View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13736_low_9 (Length: 380)

Name: NF13736_low_9
Description: NF13736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13736_low_9
NF13736_low_9
[»] chr6 (114 HSPs)
chr6 (1-370)||(19289026-19289398)
chr6 (1-370)||(18498798-18499154)
chr6 (1-295)||(18555448-18555745)
chr6 (1-370)||(11235677-11236048)
chr6 (1-370)||(31931601-31931973)
chr6 (1-370)||(11206124-11206495)
chr6 (1-294)||(12952836-12953148)
chr6 (1-347)||(21128259-21128605)
chr6 (1-370)||(9933333-9933689)
chr6 (1-106)||(7586169-7586274)
chr6 (1-370)||(17741347-17741720)
chr6 (1-293)||(25518868-25519178)
chr6 (242-353)||(17047966-17048078)
chr6 (176-300)||(30401315-30401440)
chr6 (1-219)||(25686547-25686767)
chr6 (24-156)||(11525581-11525712)
chr6 (1-219)||(25735354-25735576)
chr6 (1-293)||(18834357-18834652)
chr6 (246-344)||(17608098-17608196)
chr6 (192-293)||(18825944-18826046)
chr6 (1-232)||(13913227-13913462)
chr6 (1-219)||(25675339-25675561)
chr6 (1-219)||(25679415-25679637)
chr6 (1-104)||(25722872-25722976)
chr6 (265-347)||(11525382-11525465)
chr6 (1-232)||(13928366-13928601)
chr6 (142-294)||(22386976-22387126)
chr6 (192-295)||(25675551-25675654)
chr6 (192-295)||(25679627-25679730)
chr6 (147-292)||(5845426-5845571)
chr6 (192-293)||(22309179-22309281)
chr6 (1-97)||(17047733-17047827)
chr6 (174-296)||(20635929-20636049)
chr6 (192-295)||(25686438-25686540)
chr6 (1-219)||(31572592-31572812)
chr6 (156-291)||(20029629-20029766)
chr6 (156-291)||(20062380-20062517)
chr6 (192-293)||(29765923-29766024)
chr6 (278-347)||(7585918-7585988)
chr6 (177-292)||(18925469-18925583)
chr6 (192-370)||(25722601-25722764)
chr6 (156-292)||(25788035-25788173)
chr6 (1-203)||(17608222-17608423)
chr6 (313-370)||(12952775-12952833)
chr6 (313-370)||(18555747-18555804)
chr6 (313-370)||(18825883-18825940)
chr6 (317-370)||(25735201-25735254)
chr6 (1-219)||(29765713-29765933)
chr6 (313-370)||(29766028-29766085)
chr6 (192-293)||(4293114-4293215)
chr6 (156-291)||(7375483-7375620)
chr6 (192-293)||(27166150-27166251)
chr6 (1-219)||(4292904-4293124)
chr6 (273-344)||(16264945-16265015)
chr6 (313-363)||(5845576-5845626)
chr6 (191-292)||(12828065-12828165)
chr6 (328-370)||(18834296-18834338)
chr6 (147-219)||(25722754-25722828)
chr6 (1-77)||(8653838-8653915)
chr6 (313-362)||(10547424-10547473)
chr6 (313-362)||(13928646-13928695)
chr6 (317-370)||(22309290-22309343)
chr6 (313-370)||(25519182-25519239)
chr6 (329-370)||(25675673-25675714)
chr6 (329-370)||(25679749-25679790)
chr6 (245-293)||(25800760-25800806)
chr6 (1-77)||(27166384-27166461)
chr6 (177-232)||(31572786-31572843)
chr6 (177-292)||(32761639-32761754)
chr6 (245-293)||(17043048-17043096)
chr6 (261-293)||(17745439-17745471)
chr6 (313-353)||(18925424-18925464)
chr6 (149-219)||(18925557-18925631)
chr6 (192-291)||(30119972-30120070)
chr6 (318-370)||(30401261-30401313)
chr6 (246-292)||(16123250-16123294)
chr6 (246-292)||(17577504-17577548)
chr6 (262-292)||(8654120-8654150)
chr6 (157-232)||(9112276-9112356)
chr6 (157-232)||(9122913-9122993)
chr6 (246-292)||(10402825-10402870)
chr6 (262-292)||(10547478-10547508)
chr6 (262-292)||(13913472-13913502)
chr6 (147-219)||(17745562-17745636)
chr6 (149-219)||(25986408-25986481)
chr6 (262-292)||(25986539-25986569)
chr6 (263-292)||(9366-9395)
chr6 (1-77)||(7375699-7375776)
chr6 (313-350)||(8654155-8654192)
chr6 (1-77)||(11147190-11147267)
chr6 (263-292)||(12382367-12382396)
chr6 (1-77)||(12827871-12827948)
chr6 (313-362)||(16122898-16122947)
chr6 (245-293)||(16122951-16122997)
chr6 (313-362)||(16123196-16123245)
chr6 (317-362)||(17745386-17745431)
chr6 (1-188)||(18826068-18826256)
chr6 (1-77)||(20029845-20029922)
chr6 (1-77)||(20062596-20062673)
chr6 (1-77)||(25787879-25787956)
chr6 (1-77)||(25986260-25986337)
chr6 (156-203)||(26044547-26044596)
chr6 (313-370)||(27166089-27166146)
chr6 (245-293)||(31572838-31572884)
chr6 (313-353)||(7375437-7375477)
chr6 (149-213)||(10971327-10971394)
chr6 (317-353)||(11146911-11146947)
chr6 (313-353)||(12382401-12382441)
chr6 (313-353)||(12828170-12828210)
chr6 (245-293)||(17064637-17064685)
chr6 (313-345)||(18378592-18378624)
chr6 (313-353)||(25788178-25788218)
chr6 (317-353)||(25800815-25800851)
chr6 (313-353)||(30119926-30119966)
[»] chr4 (82 HSPs)
chr4 (1-370)||(18774318-18774689)
chr4 (1-370)||(16819014-16819386)
chr4 (1-370)||(19244025-19244394)
chr4 (1-370)||(23509364-23509737)
chr4 (1-289)||(8996984-8997290)
chr4 (1-370)||(18006694-18007093)
chr4 (1-370)||(55651571-55651926)
chr4 (1-370)||(49001636-49001991)
chr4 (1-156)||(14778322-14778476)
chr4 (1-293)||(11536092-11536404)
chr4 (192-293)||(39525861-39525963)
chr4 (1-106)||(14710707-14710812)
chr4 (1-104)||(17993723-17993827)
chr4 (265-364)||(33378720-33378819)
chr4 (192-293)||(11515491-11515593)
chr4 (6-156)||(36209988-36210136)
chr4 (192-293)||(10300991-10301093)
chr4 (166-293)||(31266515-31266644)
chr4 (265-347)||(36209790-36209873)
chr4 (149-293)||(17198140-17198285)
chr4 (1-219)||(15207204-15207426)
chr4 (280-370)||(17993486-17993576)
chr4 (1-219)||(24713677-24713898)
chr4 (1-104)||(5873616-5873721)
chr4 (32-188)||(11515314-11515469)
chr4 (156-292)||(18077624-18077762)
chr4 (177-292)||(4987716-4987830)
chr4 (192-292)||(19581700-19581798)
chr4 (1-188)||(10300781-10300969)
chr4 (313-370)||(11515597-11515654)
chr4 (313-370)||(11519629-11519686)
chr4 (278-370)||(14778116-14778208)
chr4 (1-104)||(19581487-19581592)
chr4 (313-370)||(31266454-31266511)
chr4 (313-370)||(39525800-39525857)
chr4 (1-219)||(4987520-4987742)
chr4 (245-293)||(11519577-11519625)
chr4 (192-293)||(5873828-5873927)
chr4 (149-293)||(16305502-16305647)
chr4 (192-292)||(24713888-24713981)
chr4 (316-370)||(11536411-11536465)
chr4 (177-292)||(14835806-14835920)
chr4 (156-292)||(25657539-25657676)
chr4 (156-292)||(40454068-40454205)
chr4 (1-293)||(47151797-47152092)
chr4 (312-353)||(4987834-4987875)
chr4 (313-362)||(5873931-5873980)
chr4 (313-370)||(8996918-8996975)
chr4 (1-104)||(10695886-10695991)
chr4 (313-362)||(10696170-10696219)
chr4 (1-104)||(10909655-10909760)
chr4 (313-362)||(10909939-10909988)
chr4 (156-232)||(20648410-20648490)
chr4 (313-362)||(24713986-24714035)
chr4 (313-362)||(47151742-47151791)
chr4 (313-353)||(3391005-3391045)
chr4 (156-210)||(5023138-5023196)
chr4 (313-353)||(15207071-15207111)
chr4 (246-293)||(15207115-15207160)
chr4 (313-353)||(17198096-17198136)
chr4 (313-353)||(19581803-19581843)
chr4 (246-292)||(40470324-40470368)
chr4 (246-292)||(8182594-8182639)
chr4 (157-232)||(17918456-17918536)
chr4 (157-232)||(17929104-17929184)
chr4 (1-77)||(3370962-3371039)
chr4 (1-77)||(3390702-3390779)
chr4 (265-294)||(3499442-3499471)
chr4 (174-203)||(9751415-9751444)
chr4 (317-370)||(10301101-10301154)
chr4 (150-219)||(14835894-14835966)
chr4 (1-77)||(14836039-14836116)
chr4 (263-292)||(25009290-25009319)
chr4 (147-238)||(10696034-10696129)
chr4 (147-238)||(10909803-10909898)
chr4 (313-353)||(14835761-14835801)
chr4 (246-294)||(15474944-15474992)
chr4 (313-353)||(16305651-16305691)
chr4 (313-353)||(16317876-16317916)
chr4 (317-353)||(25009328-25009364)
chr4 (1-104)||(31266706-31266810)
chr4 (51-188)||(39525985-39526121)
[»] chr5 (93 HSPs)
chr5 (1-364)||(20167828-20168191)
chr5 (1-370)||(36096847-36097234)
chr5 (1-370)||(36095390-36095777)
chr5 (1-370)||(13533945-13534317)
chr5 (1-370)||(13523218-13523590)
chr5 (1-204)||(35543048-35543253)
chr5 (1-295)||(20416732-20417028)
chr5 (177-370)||(35542864-35543042)
chr5 (1-293)||(105949-106245)
chr5 (1-370)||(32754079-32754454)
chr5 (1-156)||(13405145-13405299)
chr5 (6-344)||(23478404-23478740)
chr5 (177-293)||(20624580-20624697)
chr5 (265-370)||(40228957-40229062)
chr5 (273-370)||(20214850-20214947)
chr5 (1-184)||(40228688-40228870)
chr5 (264-347)||(1915697-1915781)
chr5 (194-370)||(21414544-21414705)
chr5 (265-364)||(40032509-40032608)
chr5 (9-184)||(40032695-40032869)
chr5 (6-156)||(1915452-1915600)
chr5 (265-370)||(13405384-13405489)
chr5 (177-292)||(17447025-17447140)
chr5 (6-104)||(20215121-20215218)
chr5 (1-293)||(21414332-21414644)
chr5 (177-292)||(17457641-17457756)
chr5 (156-291)||(24926429-24926566)
chr5 (156-292)||(36228572-36228710)
chr5 (156-291)||(36084295-36084432)
chr5 (156-232)||(10754384-10754465)
chr5 (147-292)||(21706257-21706403)
chr5 (1-292)||(23406279-23406573)
chr5 (156-292)||(8521675-8521812)
chr5 (316-370)||(20416673-20416727)
chr5 (313-370)||(105888-105945)
chr5 (1-219)||(17457445-17457667)
chr5 (177-292)||(23392532-23392647)
chr5 (177-291)||(24983750-24983864)
chr5 (156-292)||(43043961-43044099)
chr5 (1-292)||(34051792-34052086)
chr5 (273-344)||(33933598-33933669)
chr5 (156-292)||(1109435-1109572)
chr5 (1-104)||(19478023-19478128)
chr5 (156-292)||(20797528-20797666)
chr5 (1-104)||(23392738-23392843)
chr5 (1-77)||(24983554-24983631)
chr5 (156-232)||(34771802-34771882)
chr5 (156-232)||(34782747-34782827)
chr5 (313-362)||(37406418-37406467)
chr5 (191-291)||(43622198-43622297)
chr5 (313-353)||(17447145-17447185)
chr5 (313-353)||(17457761-17457801)
chr5 (313-353)||(19463743-19463783)
chr5 (313-353)||(19477773-19477813)
chr5 (156-291)||(20551649-20551786)
chr5 (246-294)||(21660491-21660539)
chr5 (313-353)||(24926572-24926612)
chr5 (313-353)||(24983870-24983910)
chr5 (313-353)||(34062408-34062448)
chr5 (149-292)||(34062453-34062597)
chr5 (245-292)||(42394831-42394876)
chr5 (274-341)||(4887303-4887370)
chr5 (265-344)||(11207724-11207803)
chr5 (273-344)||(11994210-11994281)
chr5 (156-219)||(20562245-20562311)
chr5 (246-292)||(21703495-21703539)
chr5 (156-219)||(24983710-24983776)
chr5 (149-219)||(17446978-17447051)
chr5 (316-366)||(20624523-20624573)
chr5 (157-232)||(27623057-27623137)
chr5 (149-219)||(30070188-30070261)
chr5 (262-292)||(31448369-31448399)
chr5 (1-77)||(17446829-17446906)
chr5 (1-104)||(19463993-19464098)
chr5 (1-77)||(20551865-20551942)
chr5 (263-292)||(21517560-21517589)
chr5 (263-292)||(21519893-21519922)
chr5 (316-353)||(21703547-21703584)
chr5 (1-104)||(21706109-21706214)
chr5 (1-77)||(34062670-34062747)
chr5 (1-77)||(36084511-36084588)
chr5 (156-232)||(42394871-42394951)
chr5 (313-353)||(20551603-20551643)
chr5 (313-353)||(20562111-20562151)
chr5 (1-104)||(20624787-20624891)
chr5 (317-353)||(21517515-21517551)
chr5 (175-203)||(21660437-21660465)
chr5 (313-353)||(23392487-23392527)
chr5 (313-353)||(23406234-23406274)
chr5 (313-353)||(34051747-34051787)
chr5 (313-353)||(36084249-36084289)
chr5 (147-219)||(37406560-37406635)
chr5 (313-353)||(43622303-43622343)
[»] chr1 (74 HSPs)
chr1 (1-370)||(46180573-46180929)
chr1 (1-370)||(45070317-45070703)
chr1 (1-370)||(28474259-28474626)
chr1 (1-370)||(22609671-22610024)
chr1 (1-370)||(20799096-20799468)
chr1 (1-293)||(20883620-20883932)
chr1 (1-370)||(23927090-23927431)
chr1 (1-295)||(675603-675915)
chr1 (1-124)||(23064981-23065104)
chr1 (1-370)||(14387803-14388176)
chr1 (1-124)||(19038039-19038162)
chr1 (1-219)||(41132446-41132665)
chr1 (6-124)||(44201049-44201167)
chr1 (1-370)||(18310649-18311022)
chr1 (265-370)||(26547929-26548034)
chr1 (1-124)||(5929735-5929858)
chr1 (1-104)||(52350630-52350734)
chr1 (1-156)||(28380027-28380180)
chr1 (265-370)||(22019638-22019743)
chr1 (273-370)||(22655789-22655886)
chr1 (1-293)||(11194806-11195117)
chr1 (265-370)||(22643199-22643304)
chr1 (6-156)||(22019374-22019523)
chr1 (265-347)||(23065236-23065319)
chr1 (265-347)||(28380296-28380379)
chr1 (316-370)||(20883558-20883612)
chr1 (313-366)||(20866991-20867044)
chr1 (156-291)||(39193851-39193988)
chr1 (177-293)||(12947066-12947185)
chr1 (5-104)||(20251810-20251908)
chr1 (280-370)||(52350393-52350483)
chr1 (278-347)||(19038307-19038377)
chr1 (142-238)||(19170145-19170241)
chr1 (156-292)||(20441073-20441211)
chr1 (149-292)||(39587275-39587419)
chr1 (192-293)||(9050226-9050325)
chr1 (156-292)||(147971-148108)
chr1 (177-296)||(17371265-17371382)
chr1 (313-370)||(675917-675974)
chr1 (281-345)||(19170054-19170119)
chr1 (1-218)||(12946872-12947091)
chr1 (6-121)||(26548184-26548299)
chr1 (6-156)||(22642933-22643082)
chr1 (273-344)||(25448243-25448314)
chr1 (156-292)||(154046-154183)
chr1 (156-292)||(5974077-5974214)
chr1 (245-294)||(18381675-18381722)
chr1 (142-203)||(21544202-21544263)
chr1 (246-296)||(21544289-21544339)
chr1 (177-292)||(47195614-47195728)
chr1 (313-362)||(9050173-9050222)
chr1 (313-362)||(21165289-21165338)
chr1 (246-293)||(21165240-21165285)
chr1 (313-353)||(24252972-24253012)
chr1 (313-353)||(39193805-39193845)
chr1 (313-353)||(39587424-39587464)
chr1 (313-353)||(47195733-47195773)
chr1 (273-344)||(2327118-2327189)
chr1 (313-363)||(11194752-11194802)
chr1 (157-232)||(23580140-23580220)
chr1 (157-232)||(35013235-35013315)
chr1 (149-219)||(47195567-47195640)
chr1 (156-232)||(4250379-4250459)
chr1 (313-362)||(17957706-17957755)
chr1 (1-104)||(18381849-18381954)
chr1 (313-350)||(20441031-20441068)
chr1 (263-292)||(24252938-24252967)
chr1 (246-291)||(26577024-26577068)
chr1 (147-203)||(37642433-37642489)
chr1 (265-294)||(37642533-37642562)
chr1 (281-347)||(44201299-44201363)
chr1 (245-292)||(4250339-4250384)
chr1 (265-320)||(5929990-5930046)
chr1 (313-353)||(18381631-18381671)
[»] scaffold0752 (2 HSPs)
scaffold0752 (1-367)||(2030-2414)
scaffold0752 (1-41)||(1415-1455)
[»] scaffold0090 (2 HSPs)
scaffold0090 (1-350)||(856-1190)
scaffold0090 (1-350)||(5236-5570)
[»] chr2 (69 HSPs)
chr2 (1-350)||(19312675-19313042)
chr2 (1-370)||(19356523-19356880)
chr2 (1-370)||(19497660-19498016)
chr2 (1-370)||(20646233-20646632)
chr2 (141-350)||(19297314-19297523)
chr2 (1-146)||(19299890-19300035)
chr2 (1-370)||(24275229-24275600)
chr2 (1-370)||(17968860-17969234)
chr2 (1-295)||(967215-967528)
chr2 (177-370)||(22755681-22755872)
chr2 (1-124)||(21025429-21025552)
chr2 (1-293)||(36784535-36784830)
chr2 (1-219)||(22774562-22774783)
chr2 (1-219)||(22779940-22780161)
chr2 (1-219)||(22763858-22764079)
chr2 (265-370)||(24814270-24814374)
chr2 (265-344)||(1084347-1084426)
chr2 (265-347)||(24793718-24793799)
chr2 (1-292)||(24414755-24415048)
chr2 (156-292)||(18768638-18768776)
chr2 (313-370)||(6081677-6081734)
chr2 (317-370)||(22764179-22764232)
chr2 (1-104)||(26867274-26867379)
chr2 (156-292)||(28721048-28721186)
chr2 (156-292)||(28731636-28731774)
chr2 (245-293)||(6081625-6081673)
chr2 (273-347)||(21025199-21025274)
chr2 (177-292)||(24425267-24425381)
chr2 (177-292)||(26867471-26867585)
chr2 (313-370)||(967156-967213)
chr2 (177-292)||(21172181-21172296)
chr2 (281-370)||(23392384-23392473)
chr2 (1-104)||(26879863-26879968)
chr2 (1-104)||(27978303-27978408)
chr2 (1-104)||(28064832-28064937)
chr2 (313-370)||(36784474-36784531)
chr2 (150-353)||(24414710-24414898)
chr2 (177-292)||(20417377-20417491)
chr2 (172-370)||(22774752-22774936)
chr2 (172-370)||(22780130-22780314)
chr2 (313-362)||(20417323-20417372)
chr2 (313-362)||(27978062-27978111)
chr2 (313-362)||(28064591-28064640)
chr2 (313-362)||(38585765-38585814)
chr2 (313-353)||(24425222-24425262)
chr2 (313-353)||(26867590-26867630)
chr2 (313-353)||(26880179-26880219)
chr2 (273-344)||(28700947-28701018)
chr2 (157-232)||(16777213-16777293)
chr2 (147-204)||(23392533-23392588)
chr2 (262-292)||(26880144-26880174)
chr2 (262-292)||(28374229-28374259)
chr2 (262-292)||(28379568-28379598)
chr2 (157-232)||(34790006-34790086)
chr2 (157-232)||(34804149-34804229)
chr2 (192-232)||(6081589-6081630)
chr2 (1-77)||(18768855-18768932)
chr2 (1-77)||(21172415-21172492)
chr2 (150-219)||(24425355-24425427)
chr2 (1-77)||(24425500-24425577)
chr2 (156-219)||(27978187-27978252)
chr2 (156-219)||(28064716-28064781)
chr2 (312-353)||(28374184-28374225)
chr2 (1-104)||(28374435-28374540)
chr2 (312-353)||(28379523-28379564)
chr2 (1-77)||(28731853-28731930)
chr2 (313-353)||(18768593-18768633)
chr2 (313-353)||(30795259-30795299)
chr2 (245-292)||(38585819-38585864)
[»] scaffold0547 (1 HSPs)
scaffold0547 (1-370)||(928-1284)
[»] chr8 (69 HSPs)
chr8 (5-350)||(19461192-19461554)
chr8 (5-350)||(19558870-19559232)
chr8 (1-370)||(22211073-22211429)
chr8 (1-294)||(22135603-22135899)
chr8 (1-294)||(22166752-22167064)
chr8 (1-370)||(3843762-3844117)
chr8 (1-370)||(20259303-20259658)
chr8 (1-370)||(21045933-21046288)
chr8 (1-370)||(7018085-7018422)
chr8 (1-370)||(23370788-23371159)
chr8 (1-203)||(23271043-23271245)
chr8 (246-370)||(28903746-28903870)
chr8 (177-294)||(23783747-23783866)
chr8 (192-370)||(3833174-3833337)
chr8 (265-370)||(40003491-40003596)
chr8 (205-370)||(23380768-23380918)
chr8 (174-295)||(3844226-3844349)
chr8 (265-344)||(21541272-21541351)
chr8 (265-370)||(8032313-8032418)
chr8 (265-370)||(18534814-18534919)
chr8 (1-184)||(8032059-8032241)
chr8 (278-347)||(17518831-17518901)
chr8 (273-370)||(29379881-29379978)
chr8 (265-347)||(23270921-23271004)
chr8 (156-292)||(19225329-19225467)
chr8 (313-370)||(22135543-22135600)
chr8 (313-370)||(22166692-22166749)
chr8 (156-291)||(19418747-19418884)
chr8 (156-291)||(19429324-19429461)
chr8 (177-292)||(16747436-16747550)
chr8 (313-370)||(3844351-3844408)
chr8 (1-104)||(18153974-18154079)
chr8 (206-293)||(22623113-22623202)
chr8 (32-203)||(28903514-28903686)
chr8 (9-121)||(29379612-29379724)
chr8 (273-344)||(1237960-1238031)
chr8 (6-104)||(40003260-40003358)
chr8 (177-362)||(18768813-18768982)
chr8 (156-292)||(20160977-20161114)
chr8 (156-292)||(20196353-20196490)
chr8 (156-292)||(30314444-30314581)
chr8 (1-104)||(16747240-16747345)
chr8 (246-294)||(18158744-18158790)
chr8 (313-362)||(23269586-23269635)
chr8 (178-292)||(23269640-23269753)
chr8 (177-292)||(31215450-31215565)
chr8 (313-362)||(40212852-40212901)
chr8 (313-353)||(16747555-16747595)
chr8 (313-353)||(23457005-23457045)
chr8 (313-353)||(23469161-23469201)
chr8 (313-353)||(26734717-26734757)
chr8 (6-156)||(17519029-17519178)
chr8 (314-353)||(18158794-18158833)
chr8 (273-344)||(19927337-19927408)
chr8 (246-292)||(26734762-26734806)
chr8 (156-219)||(31215410-31215476)
chr8 (157-232)||(3221028-3221108)
chr8 (149-219)||(16436879-16436952)
chr8 (149-219)||(18768956-18769029)
chr8 (313-370)||(23783869-23783927)
chr8 (149-232)||(26111620-26111708)
chr8 (265-294)||(1745437-1745466)
chr8 (245-289)||(18154224-18154266)
chr8 (1-104)||(18158494-18158599)
chr8 (317-370)||(22623052-22623105)
chr8 (156-219)||(28691296-28691361)
chr8 (263-292)||(28691386-28691415)
chr8 (263-292)||(30325058-30325087)
chr8 (313-353)||(18154273-18154313)
[»] chr3 (147 HSPs)
chr3 (1-370)||(21736338-21736710)
chr3 (1-370)||(31113609-31113993)
chr3 (1-293)||(15650783-15651077)
chr3 (1-293)||(15662418-15662712)
chr3 (77-370)||(23680050-23680330)
chr3 (77-370)||(24052287-24052567)
chr3 (1-370)||(2246595-2246967)
chr3 (1-370)||(27173060-27173422)
chr3 (1-219)||(13199029-13199249)
chr3 (1-124)||(51989027-51989150)
chr3 (1-370)||(29933216-29933565)
chr3 (1-370)||(29982370-29982719)
chr3 (158-289)||(16665825-16665959)
chr3 (1-293)||(1053937-1054232)
chr3 (265-347)||(13148569-13148651)
chr3 (8-370)||(10529386-10529727)
chr3 (192-293)||(8739822-8739924)
chr3 (192-293)||(9092060-9092162)
chr3 (192-293)||(16077367-16077469)
chr3 (194-293)||(8758193-8758293)
chr3 (273-363)||(17022336-17022426)
chr3 (172-370)||(29905821-29906004)
chr3 (172-370)||(29946986-29947169)
chr3 (172-370)||(29996140-29996323)
chr3 (192-293)||(1064576-1064678)
chr3 (6-156)||(17022065-17022213)
chr3 (1-219)||(27883611-27883831)
chr3 (1-184)||(41045775-41045959)
chr3 (265-344)||(11908755-11908834)
chr3 (192-293)||(17281127-17281229)
chr3 (313-370)||(13198876-13198933)
chr3 (4-92)||(29947261-29947349)
chr3 (4-92)||(29996415-29996503)
chr3 (265-344)||(12752391-12752470)
chr3 (279-370)||(22151563-22151654)
chr3 (147-293)||(14581512-14581670)
chr3 (156-292)||(19887067-19887205)
chr3 (1-104)||(8995859-8995963)
chr3 (4-92)||(29906096-29906184)
chr3 (192-292)||(8995651-8995753)
chr3 (192-292)||(9006203-9006305)
chr3 (273-370)||(41046021-41046118)
chr3 (1-219)||(4404500-4404722)
chr3 (149-292)||(11216435-11216579)
chr3 (313-370)||(15650722-15650779)
chr3 (313-370)||(15662357-15662414)
chr3 (313-370)||(17281066-17281123)
chr3 (245-293)||(16670857-16670905)
chr3 (156-232)||(6490119-6490200)
chr3 (156-232)||(6500773-6500854)
chr3 (156-232)||(9981656-9981737)
chr3 (156-232)||(9993664-9993745)
chr3 (6-156)||(22151284-22151433)
chr3 (150-219)||(29905973-29906044)
chr3 (150-219)||(29947138-29947209)
chr3 (150-219)||(29996292-29996363)
chr3 (300-347)||(51988794-51988841)
chr3 (246-296)||(13977993-13978043)
chr3 (246-296)||(15833664-15833714)
chr3 (246-296)||(15851210-15851260)
chr3 (328-370)||(16665760-16665802)
chr3 (1-188)||(17281251-17281440)
chr3 (156-292)||(934011-934149)
chr3 (313-370)||(8739761-8739818)
chr3 (313-370)||(9091999-9092056)
chr3 (313-370)||(14581674-14581731)
chr3 (1-188)||(16077157-16077345)
chr3 (313-370)||(16077473-16077530)
chr3 (313-370)||(16670796-16670853)
chr3 (1-202)||(1064366-1064569)
chr3 (245-292)||(4457391-4457436)
chr3 (147-292)||(14321395-14321541)
chr3 (158-219)||(16670931-16670994)
chr3 (273-344)||(51341348-51341419)
chr3 (142-203)||(15833577-15833638)
chr3 (156-292)||(29460927-29461064)
chr3 (156-292)||(29471779-29471916)
chr3 (313-370)||(1054236-1054292)
chr3 (313-370)||(1064682-1064738)
chr3 (313-370)||(8758133-8758189)
chr3 (1-101)||(9006414-9006515)
chr3 (1-104)||(12567172-12567277)
chr3 (1-104)||(13261575-13261680)
chr3 (313-362)||(14254055-14254104)
chr3 (313-362)||(14321341-14321390)
chr3 (313-370)||(15226633-15226690)
chr3 (156-232)||(17909773-17909853)
chr3 (156-292)||(23636094-23636232)
chr3 (245-293)||(27883857-27883903)
chr3 (1-104)||(28169309-28169414)
chr3 (245-292)||(4404748-4404793)
chr3 (313-353)||(4404798-4404838)
chr3 (313-353)||(4457441-4457481)
chr3 (313-353)||(11168000-11168040)
chr3 (313-353)||(11216390-11216430)
chr3 (156-210)||(12237409-12237465)
chr3 (156-210)||(12249235-12249291)
chr3 (246-293)||(15226694-15226739)
chr3 (1-104)||(16666030-16666134)
chr3 (313-353)||(18851360-18851400)
chr3 (313-353)||(38315233-38315273)
chr3 (156-291)||(48337625-48337762)
chr3 (246-292)||(7608039-7608083)
chr3 (1-87)||(7804438-7804525)
chr3 (156-219)||(9390987-9391053)
chr3 (6-156)||(13148304-13148453)
chr3 (313-364)||(17961885-17961936)
chr3 (265-344)||(20627269-20627347)
chr3 (262-301)||(28169555-28169594)
chr3 (149-219)||(4457292-4457365)
chr3 (1-54)||(8774887-8774941)
chr3 (1-54)||(8785472-8785526)
chr3 (166-219)||(9006295-9006349)
chr3 (262-292)||(9390933-9390963)
chr3 (314-364)||(18006790-18006840)
chr3 (246-292)||(24706268-24706313)
chr3 (316-362)||(28169593-28169639)
chr3 (157-232)||(39672653-39672733)
chr3 (263-292)||(1783784-1783813)
chr3 (263-292)||(1794196-1794225)
chr3 (1-77)||(4457143-4457220)
chr3 (1-77)||(8740057-8740134)
chr3 (317-370)||(8995589-8995642)
chr3 (317-370)||(9006141-9006194)
chr3 (1-77)||(9535836-9535913)
chr3 (246-291)||(9536068-9536112)
chr3 (1-77)||(11164057-11164134)
chr3 (263-292)||(13604737-13604766)
chr3 (313-370)||(15216010-15216067)
chr3 (150-219)||(16348419-16348491)
chr3 (1-77)||(17909932-17910009)
chr3 (172-291)||(17961759-17961879)
chr3 (1-77)||(24706484-24706561)
chr3 (265-338)||(41495265-41495337)
chr3 (275-344)||(46349617-46349686)
chr3 (273-342)||(47405243-47405311)
chr3 (317-353)||(1783739-1783775)
chr3 (317-353)||(1794151-1794187)
chr3 (313-353)||(7794258-7794298)
chr3 (313-353)||(7804214-7804254)
chr3 (263-291)||(7804260-7804288)
chr3 (317-353)||(9380325-9380361)
chr3 (317-353)||(9390888-9390924)
chr3 (245-292)||(14254109-14254154)
chr3 (313-353)||(17909670-17909710)
chr3 (317-353)||(19887022-19887058)
chr3 (313-353)||(48337768-48337808)
[»] chr7 (60 HSPs)
chr7 (1-370)||(24882135-24882507)
chr7 (1-370)||(13682534-13682889)
chr7 (1-370)||(26209280-26209635)
chr7 (1-376)||(29590206-29590583)
chr7 (1-370)||(12733898-12734253)
chr7 (1-370)||(8933733-8934089)
chr7 (1-370)||(15216530-15216885)
chr7 (1-370)||(3476055-3476427)
chr7 (1-293)||(6044003-6044298)
chr7 (1-156)||(8998866-8999020)
chr7 (1-370)||(48382359-48382731)
chr7 (150-293)||(19193262-19193406)
chr7 (265-370)||(13174317-13174422)
chr7 (192-370)||(18419538-18419701)
chr7 (1-293)||(38593528-38593822)
chr7 (265-347)||(8998667-8998750)
chr7 (1-156)||(11086977-11087130)
chr7 (265-370)||(11086771-11086876)
chr7 (6-156)||(13174537-13174685)
chr7 (192-370)||(18441619-18441782)
chr7 (1-291)||(9171198-9171491)
chr7 (156-292)||(31116304-31116442)
chr7 (156-291)||(1367998-1368135)
chr7 (1-202)||(18441409-18441612)
chr7 (156-291)||(21769737-21769874)
chr7 (1-291)||(9170397-9170690)
chr7 (313-370)||(6043942-6043999)
chr7 (1-291)||(9159942-9160235)
chr7 (1-188)||(18419328-18419516)
chr7 (265-342)||(19710793-19710870)
chr7 (192-293)||(25201376-25201475)
chr7 (156-292)||(3166103-3166240)
chr7 (177-292)||(589621-589736)
chr7 (313-370)||(19193410-19193467)
chr7 (166-232)||(14745520-14745589)
chr7 (156-292)||(44280865-44281002)
chr7 (313-362)||(38593475-38593524)
chr7 (313-353)||(25201332-25201372)
chr7 (156-219)||(15888194-15888260)
chr7 (178-294)||(48805696-48805809)
chr7 (157-232)||(454650-454730)
chr7 (157-232)||(467432-467512)
chr7 (157-232)||(9444229-9444309)
chr7 (157-232)||(20990022-20990102)
chr7 (157-232)||(21002859-21002939)
chr7 (157-232)||(23264442-23264522)
chr7 (1-77)||(589425-589502)
chr7 (1-77)||(1367842-1367919)
chr7 (263-292)||(9261574-9261603)
chr7 (263-292)||(20491466-20491495)
chr7 (1-77)||(21769953-21770030)
chr7 (263-292)||(24244262-24244291)
chr7 (263-292)||(30049996-30050025)
chr7 (313-362)||(40054493-40054542)
chr7 (313-353)||(1368141-1368181)
chr7 (313-353)||(9160241-9160281)
chr7 (313-353)||(9170696-9170736)
chr7 (313-353)||(9171497-9171537)
chr7 (313-353)||(21769691-21769731)
chr7 (317-353)||(31116259-31116295)
[»] scaffold0073 (2 HSPs)
scaffold0073 (1-295)||(58511-58808)
scaffold0073 (313-370)||(58810-58867)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-370)||(58982-59338)
[»] scaffold0544 (1 HSPs)
scaffold0544 (51-370)||(9596-9899)
[»] scaffold0774 (1 HSPs)
scaffold0774 (1-370)||(6038-6410)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-333)||(22073-22404)
[»] scaffold0017 (5 HSPs)
scaffold0017 (1-370)||(40008-40391)
scaffold0017 (1-203)||(58735-58937)
scaffold0017 (192-293)||(180656-180759)
scaffold0017 (192-293)||(175744-175847)
scaffold0017 (317-370)||(175855-175908)
[»] scaffold0163 (4 HSPs)
scaffold0163 (1-293)||(29685-29997)
scaffold0163 (317-370)||(29996-30049)
scaffold0163 (191-291)||(36535-36634)
scaffold0163 (313-353)||(36489-36529)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-370)||(35747-36119)
[»] scaffold0012 (5 HSPs)
scaffold0012 (1-370)||(7311-7696)
scaffold0012 (1-370)||(127856-128210)
scaffold0012 (1-219)||(141015-141234)
scaffold0012 (172-370)||(141203-141386)
scaffold0012 (273-341)||(215224-215292)
[»] scaffold0185 (1 HSPs)
scaffold0185 (6-370)||(9335-9712)
[»] scaffold0280 (1 HSPs)
scaffold0280 (6-370)||(17501-17878)
[»] scaffold0481 (1 HSPs)
scaffold0481 (1-370)||(12498-12871)
[»] scaffold0739 (1 HSPs)
scaffold0739 (1-370)||(2204-2575)
[»] scaffold0040 (1 HSPs)
scaffold0040 (34-370)||(69840-70179)
[»] scaffold0063 (1 HSPs)
scaffold0063 (43-370)||(15119-15449)
[»] scaffold0042 (5 HSPs)
scaffold0042 (1-293)||(5505-5800)
scaffold0042 (192-293)||(13110-13212)
scaffold0042 (313-370)||(5804-5861)
scaffold0042 (313-370)||(13216-13273)
scaffold0042 (1-188)||(12900-13088)
[»] scaffold0604 (1 HSPs)
scaffold0604 (46-370)||(1-328)
[»] scaffold0016 (2 HSPs)
scaffold0016 (177-370)||(163529-163708)
scaffold0016 (147-294)||(163481-163647)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-94)||(28749-28842)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-156)||(61254-61408)
scaffold0005 (278-370)||(61522-61614)
scaffold0005 (313-353)||(3898-3938)
[»] scaffold0410 (2 HSPs)
scaffold0410 (177-370)||(6943-7122)
scaffold0410 (1-101)||(15939-16039)
[»] scaffold0407 (4 HSPs)
scaffold0407 (1-293)||(11850-12162)
scaffold0407 (192-293)||(15681-15783)
scaffold0407 (313-370)||(11789-11846)
scaffold0407 (313-370)||(15620-15677)
[»] scaffold0497 (3 HSPs)
scaffold0497 (192-293)||(10022-10124)
scaffold0497 (313-370)||(9961-10018)
scaffold0497 (1-188)||(10146-10334)
[»] scaffold0201 (2 HSPs)
scaffold0201 (1-370)||(7440-7812)
scaffold0201 (313-362)||(7197-7246)
[»] scaffold0002 (7 HSPs)
scaffold0002 (265-347)||(156351-156433)
scaffold0002 (265-370)||(481488-481593)
scaffold0002 (6-156)||(481693-481842)
scaffold0002 (1-104)||(117308-117413)
scaffold0002 (313-353)||(117623-117663)
scaffold0002 (6-156)||(156549-156698)
scaffold0002 (147-219)||(117455-117530)
[»] scaffold0655 (2 HSPs)
scaffold0655 (265-347)||(5421-5503)
scaffold0655 (6-104)||(5156-5254)
[»] scaffold0084 (2 HSPs)
scaffold0084 (192-293)||(56515-56617)
scaffold0084 (313-352)||(56472-56511)
[»] scaffold0018 (1 HSPs)
scaffold0018 (265-370)||(6214-6318)
[»] scaffold1321 (1 HSPs)
scaffold1321 (265-370)||(626-731)
[»] scaffold1263 (1 HSPs)
scaffold1263 (265-370)||(819-924)
[»] scaffold0422 (1 HSPs)
scaffold0422 (246-342)||(12021-12117)
[»] scaffold0010 (3 HSPs)
scaffold0010 (6-156)||(61771-61919)
scaffold0010 (265-370)||(62019-62124)
scaffold0010 (265-370)||(117580-117685)
[»] scaffold0269 (1 HSPs)
scaffold0269 (265-344)||(7600-7679)
[»] scaffold0908 (1 HSPs)
scaffold0908 (273-344)||(3611-3682)
[»] scaffold0083 (1 HSPs)
scaffold0083 (156-232)||(53400-53481)
[»] scaffold0050 (1 HSPs)
scaffold0050 (281-344)||(35512-35575)
[»] scaffold1102 (2 HSPs)
scaffold1102 (313-370)||(2768-2825)
scaffold1102 (245-293)||(2829-2877)
[»] scaffold0226 (4 HSPs)
scaffold0226 (177-294)||(18952-19068)
scaffold0226 (177-294)||(28346-28462)
scaffold0226 (313-362)||(18899-18948)
scaffold0226 (313-362)||(28293-28342)
[»] scaffold0747 (1 HSPs)
scaffold0747 (156-232)||(3164-3245)
[»] scaffold0077 (2 HSPs)
scaffold0077 (192-293)||(34894-34993)
scaffold0077 (313-353)||(34850-34890)
[»] scaffold0068 (4 HSPs)
scaffold0068 (147-292)||(7507-7653)
scaffold0068 (246-292)||(10371-10415)
scaffold0068 (1-104)||(7696-7801)
scaffold0068 (316-353)||(10326-10363)
[»] scaffold0414 (2 HSPs)
scaffold0414 (192-292)||(2709-2807)
scaffold0414 (312-353)||(2811-2852)
[»] scaffold0391 (2 HSPs)
scaffold0391 (156-291)||(1973-2109)
scaffold0391 (313-353)||(1927-1967)
[»] scaffold0272 (5 HSPs)
scaffold0272 (192-292)||(13343-13441)
scaffold0272 (192-292)||(13038-13136)
scaffold0272 (313-353)||(12993-13033)
scaffold0272 (313-353)||(13298-13338)
scaffold0272 (1-87)||(13567-13654)
[»] scaffold1477 (3 HSPs)
scaffold1477 (1-104)||(1602-1707)
scaffold1477 (192-293)||(1429-1528)
scaffold1477 (313-362)||(1376-1425)
[»] scaffold0177 (2 HSPs)
scaffold0177 (193-294)||(20179-20279)
scaffold0177 (142-203)||(20253-20314)
[»] scaffold0207 (1 HSPs)
scaffold0207 (265-344)||(20932-21011)
[»] scaffold0102 (2 HSPs)
scaffold0102 (1-219)||(51927-52149)
scaffold0102 (313-362)||(51784-51833)
[»] scaffold0072 (2 HSPs)
scaffold0072 (192-292)||(36471-36569)
scaffold0072 (313-353)||(36426-36466)
[»] scaffold0570 (2 HSPs)
scaffold0570 (142-207)||(1534-1599)
scaffold0570 (246-370)||(1382-1507)
[»] scaffold0047 (4 HSPs)
scaffold0047 (177-292)||(32640-32754)
scaffold0047 (150-219)||(32728-32800)
scaffold0047 (1-77)||(32873-32950)
scaffold0047 (313-353)||(32595-32635)
[»] scaffold1204 (2 HSPs)
scaffold1204 (194-293)||(2169-2266)
scaffold1204 (313-353)||(2125-2165)
[»] scaffold0099 (2 HSPs)
scaffold0099 (1-77)||(19460-19537)
scaffold0099 (156-219)||(19620-19687)
[»] scaffold0767 (1 HSPs)
scaffold0767 (313-353)||(5099-5139)
[»] scaffold0216 (2 HSPs)
scaffold0216 (313-353)||(464-504)
scaffold0216 (150-219)||(299-371)
[»] scaffold0178 (1 HSPs)
scaffold0178 (245-292)||(27179-27224)
[»] scaffold0439 (1 HSPs)
scaffold0439 (273-344)||(6449-6520)
[»] scaffold0314 (2 HSPs)
scaffold0314 (246-292)||(20510-20554)
scaffold0314 (156-232)||(20584-20664)
[»] scaffold0133 (3 HSPs)
scaffold0133 (156-219)||(42345-42411)
scaffold0133 (313-353)||(42211-42251)
scaffold0133 (263-291)||(42257-42285)
[»] scaffold0386 (1 HSPs)
scaffold0386 (157-232)||(12722-12802)
[»] scaffold0334 (1 HSPs)
scaffold0334 (157-232)||(19603-19683)
[»] scaffold0210 (1 HSPs)
scaffold0210 (313-347)||(1969-2003)
[»] scaffold0387 (1 HSPs)
scaffold0387 (265-294)||(7681-7710)
[»] scaffold0267 (2 HSPs)
scaffold0267 (1-77)||(6188-6265)
scaffold0267 (313-353)||(5910-5950)
[»] scaffold0217 (1 HSPs)
scaffold0217 (273-338)||(19334-19398)
[»] scaffold0028 (2 HSPs)
scaffold0028 (158-232)||(14951-15030)
scaffold0028 (263-292)||(53894-53923)
[»] scaffold0627 (1 HSPs)
scaffold0627 (313-353)||(7788-7828)
[»] scaffold0290 (1 HSPs)
scaffold0290 (313-345)||(18361-18393)


Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 114)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 19289398 - 19289026
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19289398 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttaggcga 19289299  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg-aactttgcttct 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  19289298 ggttaacttcaagagacagctcttttgagatttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaattttgcttct 19289199  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcag-ttttcttcagatgctttagg 296  Q
    ||||||||| ||||| ||||| ||||||||||||| ||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||    
T  19289198 gatgaactt-tgcttctgatgacgtcattacttcagaggcacttgaaacttcagaaatacttcatagcttcagtcgcagtttttcttcaaatgctttagg 19289100  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  19289099 ttcctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaattgattaactttgtctatg 19289026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 18498798 - 18499154
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| | | |||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  18498798 tacacttgtactttgtcaactcttcaatgatgtataagcacccagtgcttttcaaatgaacgttgtcactttccttttgatccttcgctctcttagacga 18498897  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg-aactttgcttct 198  Q
    ||||||||| ||||  ||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||    
T  18498898 ggttaactttaagattcagctcttttgagatttcagattgaatcttctgatccactgtagcttctggtgatgatatagcttctgatgaaattttgcttct 18498997  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||||||||||||| ||||| ||||||||||||| ||||| | | |||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  18498998 gatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 18499094  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  18499095 -------------gattcctttgctctctattgttcttccaagacctattgaaattgaataactttgcctatg 18499154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 18555448 - 18555745
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  18555448 tacacttgtactttgtcaactcttcaatgaggtacaagcacccagtgcttttcaaatgaacgttggcactccccttttgatccttcgctcttttagacga 18555547  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg-aactttgcttct 198  Q
    ||||||| | ||||  |||||||||||||||| || ||| | ||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  18555548 ggttaacgtaaagaatcagctcttttgagattccatattgattcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaattttgcttct 18555647  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttag 295  Q
    ||||||||||||||| ||||| |||||| |||||| ||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18555648 gatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagatgctttag 18555745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 11235677 - 11236048
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11235677 tacacttgtaatttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggaacttcccttttgatccttcgctctcttagacga 11235776  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata----------------gcttctg 183  Q
    |||| |||| ||||||||||||||||||||||| ||||| |||||| |||||||| ||||||||| |||||||||||                |||||||    
T  11235777 ggtttactttaagagacagctcttttgagattttagattgaatcttttgatcaacagtagcttctggtgatgatatagcttttgatgaaatttgcttctg 11235876  T
Q  184 atgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttct 282  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||| | | ||||||||||||||||||||||||||||| |||||||||    
T  11235877 atgaactttgcttatgatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacacagttttct 11235976  T
Q  283 tcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||                ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  11235977 tcagatgcttta----------------ggttccttttctctcttttgttcttccaagacctattgaaattgattaactttgtctatg 11236048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 31931601 - 31931973
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  31931601 tacacttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttcgcacttcccttttgatccttctctctcttagacga 31931700  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata-----------------gcttct 182  Q
    ||||||||| | || ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||                 ||||||    
T  31931701 ggttaacttaatgaaacagctcttttgagattccagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 31931800  T
Q  183 gatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||| | | ||||||  ||||||||||||||||||||||||||||||    
T  31931801 gatgaattttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcgaaaacacttcatagcttcagacgcagttttc 31931900  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||                |||||||||||||| | |||||||||||||||||||||||||| |||||||||| |||||    
T  31931901 ttcagatgcttta----------------ggttcctttgctctttattgttcttccaagacctattgaaattgattaactttgtctatg 31931973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 11206124 - 11206495
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  11206124 tacacttgtactttgtcaactcttcaatgatggacaagcacccaatgcttttcaaatgaacgttggcacttcccttttgatcattcgctctcttagacga 11206223  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctga--------------- 184  Q
    |||| |||| |||||||| |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||| ||||||                   
T  11206224 ggtttactttaagagacaactcttttgagatttcagattgaatcttttgatcaactgtagcttctggtgatgatatagtttctgatgaaatttgctgttg 11206323  T
Q  185 -tgaactttgcttctgatgaacttctgcttttgat-gcgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttct 282  Q
     ||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||| | ||||||||| || ||||||||||||||||||| ||||||||    
T  11206324 ctgaactttgcttctgatgaacttctgcttctgataacgtcattacttcagaggcacttgaaacttcataatcacttcatagcttcagacgtagttttct 11206423  T
Q  283 tcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||| |||||||                ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  11206424 tcaggtgcttta----------------ggttcctttgctctcgtttgttcttccaagacctattgaaattgattaactttgcctatg 11206495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 12953148 - 12952836
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcac-ctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| | || ||||||||||||||||| |||||||    
T  12953148 tacacttgtactttgtcaactcttcaatgaggtacaagcacctagtgcttttcaaatgaacgttggcactcccctttttgatccttcgctcttttagacg 12953049  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata-----------------gcttc 181  Q
    |||||||| | ||||  |||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||                 |||||    
T  12953048 aggttaacgtaaagaatcagctc-tttgaggtttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 12952950  T
Q  182 tgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
    |||||||||||||||||||||||||||||||| |||||  || || |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||    
T  12952949 tgatgaactttgcttctgatgaacttctgcttctgatgatgtaatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagtttt 12952850  T
Q  281 cttcagatgcttta 294  Q
    ||||||||||||||    
T  12952849 cttcagatgcttta 12952836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 21128259 - 21128605
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||  | |||  || |||||| ||||||||||    
T  21128259 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttgccacctttcctttagtctttcgctttcttagacga 21128358  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctg 199  Q
    |||| | | ||| ||||||||  ||||| | | ||||||  |||||||||| ||||||||||||| ||||| ||| |||||||||||||| | |||||||    
T  21128359 ggttgaatccaatagacagcttgtttgaaactccagattgcatcttctgatgaactgtagcttctggtgat-ataaagcttctgatgaac-tcgcttctg 21128456  T
Q  200 atgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt-taggt 297  Q
    |||| ||| ||||| ||||| |||||| |||||| || || |   | |||||| | ||||| | | |||||||| ||||||||||||||||||| |||||    
T  21128457 atgagcttttgcttctgatgacgtcatcacttcagagacact-ttatcttcaggagcacttaaaaacttcagacacagttttcttcagatgcttctaggt 21128555  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    | ||||||||| || |||||||||||||||||||||||||||||||||||    
T  21128556 ttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 21128605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 9933689 - 9933333
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || |||||||||| ||||||||||||||||| |||||  ||||||||||| || ||||| |||||||||||    
T  9933689 tacacttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttgatacctcccttttaattcttcgttctcttagacg 9933590  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |   | | | ||||||| ||||| | ||||| || ||| | |||||||| |||||||||| ||||||||||||||||||||||| | |||||||    
T  9933589 aggttga-aacgaaaaacagctcctttgaaacttcagtttaaatttactgatcaattgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 9933491  T
Q  198 tgatgaacttctgcttttgatgcgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||| |||||||||| |||||      | ||||  | |   |    ||||||||| ||||||||||||||||||||||||||||||||||||||    |    
T  9933490 tgatggacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaagcacttcatagcttcagacgcagttttcttcagatgctt----t 9933395  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||           | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  9933394 ta-----------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 9933333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 7586274 - 7586169
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||  || |||||||||||||||||    
T  7586274 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttccttttagtctttcgctctcttagacga 7586175  T
Q  101 ggttaa 106  Q
    ||||||    
T  7586174 ggttaa 7586169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 17741720 - 17741347
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||| |  || |||||||||| |||||||||||||||||  ||||  ||||||||||  || ||||  ||||||||||||    
T  17741720 tacacttgtactttgtcaactctttagagaaggacaagcacccagtgcttttcaaatgattgttgatacctccctttcaattcttcattctcttagacga 17741621  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  17741620 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 17741522  T
Q  199 gatgaa-----------------cttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcag-ttt 279  Q
    |||| |                 ||||||||| ||||| ||||||||||||||||||| | |  ||||||||| ||||||||||||||||||| || |||    
T  17741521 gatggaattctacttctgatggacttctgcttctgatgacgtcattacttcaaaggcacttgttacttcagaagcacttcatagcttcagacgtagtttt 17741422  T
Q  280 tcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||                 | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17741421 tcttcagatgcttt----------------ggattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 17741347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 25518868 - 25519178
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||  | |||| |||| || ||||| ||||||||||||    
T  25518868 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcagatgaccgttgata-ctcctttttaattcttcgttctcttagacga 25518966  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctt------ 191  Q
    ||||||   | ||| ||||||| |||||   ||||| || ||| | |||||||  |||||||||| |||||||||||||||||||||||  |||          
T  25518967 ggttaa-aacgagaaacagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 25519065  T
Q  192 ----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
              ||||||||||| |||||||||| ||||| ||||||||||||| ||||| | |  |||||| || |||||| |||||||||||||||||||    
T  25519066 gatggtcttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcataagcacttcttagcttcagacgcagtttt 25519165  T
Q  281 cttcagatgcttt 293  Q
    |||||||||||||    
T  25519166 cttcagatgcttt 25519178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 242 - 353
Target Start/End: Original strand, 17047966 - 17048078
Alignment:
Q  242 gaaacttcagaaacacttcatagcttcagacgcagtttt-cttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaag 340  Q
    |||||||||||| ||||||  |||||||||||||||||| ||||||||||||||| || |||||  |||||||| |||||||||||||||||||||||||    
T  17047966 gaaacttcagaagcacttctaagcttcagacgcagtttttcttcagatgctttagattcctctttctgatggtttctttgctctcttttgttcttccaag 17048065  T
Q  341 acctattgaaatt 353  Q
    ||||||| |||||    
T  17048066 acctatttaaatt 17048078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 30401440 - 30401315
Alignment:
Q  176 agcttctgatgaacttt-gcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacg 273  Q
    ||||||||||||| ||| |||||||||| |||||||||| ||||| |||||| |||||| ||||| | |||||||||||| |||| ||||||||||||||    
T  30401440 agcttctgatgaaatttcgcttctgatggacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcact-catagcttcagacg 30401342  T
Q  274 cagttttcttcagatgctttaggttac 300  Q
    |||||||||||||||||||||| ||||    
T  30401341 cagttttcttcagatgctttagattac 30401315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 25686767 - 25686547
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctt-ttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||  ||||||||||  || ||||| ||| |||||||    
T  25686767 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttcttcaaatgaccgttgatacctccctttcaattcttcgttcttttagacg 25686668  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatt-taatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttc 197  Q
    ||||| |   | ||| ||||||   |||| | ||||| ||  |||   |||||||| |||||||||| ||||||||||||||||||||||| | | |||     
T  25686667 aggttga-aacgagaaacagcttcattgaaacttcagtttaaaataaactgatcaaatgtagcttctggtgatgatatagcttctgatgaaatattcttt 25686569  T
Q  198 tgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||||||||    
T  25686568 tgatggacttctgcttttgatg 25686547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 11525712 - 11525581
Alignment:
Q  24 tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaacttcaagagacagctct 123  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||   || ||||||||||||||||||||||| | ||| |||||||||     
T  11525712 tcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttcctttgagtctttcgctctcttagacgaggttaaatccaatagacagctc- 11525614  T
Q  124 tttgagatttcagatttaatcttctgatcaact 156  Q
    || |||  ||||| || ||||||||||||||||    
T  11525613 ttagagtcttcaggttgaatcttctgatcaact 11525581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 25735576 - 25735354
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgc-ttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||| |||||  ||||||||||  || ||||| |||||||||||    
T  25735576 tacatttgtactttgtcaactcttcaatgaaggacaagcacccagtgctttttcaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 25735477  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatt--taatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgct 195  Q
    ||||| ||  | ||| ||||||  ||||| | ||||| ||   |||   |||||||| ||||||||||| |||||||| | ||||||||||| | |||||    
T  25735476 aggttgac-acgagaaacagcttctttgaaacttcagtttaaaaataaactgatcaaatgtagcttctgctgatgatacaacttctgatgaaatgttgct 25735378  T
Q  196 tctgatgaacttctgcttttgatg 219  Q
    ||||||  |||||||||| |||||    
T  25735377 tctgatagacttctgcttctgatg 25735354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 18834652 - 18834357
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| || ||||| | ||||||||| |||||  ||||||||||| || ||||| |||  ||||||    
T  18834652 tacacttgtactttgtcaactctgataacgaaggacaagtacccagtgttcttcaaatgaccgttgatacctcccttttaattcttcgttcttctagacg 18834553  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatg-aactttgcttc 197  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||  ||||||||||| |||||||||||||||||||| ||| |||||||    
T  18834552 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaaaccttgcttc 18834454  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||  ||||||||| ||||| ||||||||||||| ||||| | |  |||||| || |||||| || |||||||  ||  ||||| ||||||||||    
T  18834453 tgatggtcttctgcttctgatgacgtcattacttcagaggcacttgttacttcaaaagcacttcttaacttcagaaacaaatttctccagatgcttt 18834357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 344
Target Start/End: Complemental strand, 17608196 - 17608098
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    |||||| | ||||||| | ||||||||| |||||||||||||||||||||| | ||||| ||| || ||| ||||||||||||||||||||||||||||    
T  17608196 cttcaggagcacttcaaaacttcagacgtagttttcttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttcttccaagacct 17608098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 18826046 - 18825944
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| ||||| ||||||| ||||| |    ||||||||| |||||| |||||||||||||||||||||||||||||    
T  18826046 tgcttctgatgaacttctgcttctgatgacgtcactacttcagaggcactttttacttcagaagcacttcttagcttcagacgcagttttcttcagatgc 18825947  T
Q  291 ttt 293  Q
    |||    
T  18825946 ttt 18825944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 13913227 - 13913462
Alignment:
Q  1 tacacttgtactttgtcaactcttcaat-gagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctct-cttagac 98  Q
    |||||||||||||||||||||||   || || ||||||| |||||||||| ||||||||| |||||  ||||||||||  || ||||| ||| |||||||    
T  13913227 tacacttgtactttgtcaactctgttatcgaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 13913326  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatg-aactttgctt 196  Q
    |||||| |   | ||| ||||||  |||||   | ||| || ||| | |||||||| ||||||||||| ||||||||| |||||||||| ||| ||||||    
T  13913327 gaggttgaaa-cgagaaacagctactttgaatctccagtttaaatttactgatcaattgtagcttctggtgatgatatcgcttctgatgaaaccttgctt 13913425  T
Q  197 ctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||  ||||||||| ||||| |||||||||||||    
T  13913426 ctgatggtcttctgcttctgatgacgtcattacttca 13913462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 25675339 - 25675561
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctttt-caaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||  |||| |||||  || ||||| |||||||||||    
T  25675339 tacatttgtactttgtcaactcttcaatgaaggacaagcacccagtgctttttcaaatgaccgttgataccttcctttcaattcttcgttctcttagacg 25675438  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatctt--ctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgct 195  Q
    ||||| ||  | ||| ||| ||  ||||| | ||||| || ||  |   |||||||| ||||||||||| |||||||| | ||||||||||| | |||||    
T  25675439 aggttgaca-cgagaaacaacttctttgaaacttcagtttaaaaatgaactgatcaaatgtagcttctggtgatgatagatcttctgatgaaatgttgct 25675537  T
Q  196 tctgatgaacttctgcttttgatg 219  Q
    ||||||  |||||||||| |||||    
T  25675538 tctgatagacttctgcttctgatg 25675561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 25679415 - 25679637
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctttt-caaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||  |||| |||||  || ||||| |||||||||||    
T  25679415 tacatttgtactttgtcaactcttcaatgaaggacaagcacccagtgctttttcaaatgaccgttgatacctacctttcaattcttcgttctcttagacg 25679514  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatctt--ctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgct 195  Q
    ||||| ||  | ||| ||| ||  ||||| | ||||| || ||  |   |||||||| ||||||||||| |||||||| | ||||||||||| | |||||    
T  25679515 aggttgaca-cgagaaacaacttctttgaaacttcagtttaaaaatgaactgatcaaatgtagcttctggtgatgatagatcttctgatgaaatgttgct 25679613  T
Q  196 tctgatgaacttctgcttttgatg 219  Q
    ||||||  |||||||||| |||||    
T  25679614 tctgatagacttctgcttctgatg 25679637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25722976 - 25722872
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgc-ttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||| ||||||||||||||||||||||||| ||||||| || |||||| ||||||||||| |||||  ||||||||||  || ||||| |||||||||||    
T  25722976 tacatttgtactttgtcaactcttcaatgaaggacaagtacccagtgctttttcaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 25722877  T
Q  100 aggtt 104  Q
    |||||    
T  25722876 aggtt 25722872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 11525465 - 11525382
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||| || ||| |||||||||||||||||||||||||||||||    
T  11525465 cttcagatgcagatttcttcagatgcttctaggtttctcttcttgttgattcatttgctctcttttgttcttccaagacctatt 11525382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 13928366 - 13928601
Alignment:
Q  1 tacacttgtactttgtcaactcttcaat-gagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctct-cttagac 98  Q
    |||||||||||||||||||||||   || || ||||||| |||||||||| ||||||||| |||||  ||||||||||  || ||||| ||| |||||||    
T  13928366 tacacttgtactttgtcaactctgttatcgaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 13928465  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg-aactttgctt 196  Q
    |||||| |   | ||| ||| ||  |||||   | ||| || ||| | |||||||| |||||||||| |||||||||| |||||||||| ||| ||||||    
T  13928466 gaggttgaaa-cgagaaacaactactttgaatctccagtttaaatttactgatcaattgtagcttctagtgatgatatcgcttctgatgaaaccttgctt 13928564  T
Q  197 ctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||  ||||||||| ||||| |||||||||||||    
T  13928565 ctgatggtcttctgcttctgatgacgtcattacttca 13928601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 142 - 294
Target Start/End: Original strand, 22386976 - 22387126
Alignment:
Q  142 atcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca- 238  Q
    |||||||||| ||||||||||||| ||||| | | ||||| |||||||| ||||||||||||||||| ||||| ||||| |||||| ||||||||||||     
T  22386976 atcttctgatgaactgtagcttctggtgat-acacagcttatgatgaac-ttgcttctgatgaactt-tgcttctgatgacgtcatcacttcaaaggcac 22387072  T
Q  239 ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttta 294  Q
    || |   |||||| | |||||||||  |||||||||||||||||||||||||||||    
T  22387073 tttg--tcttcaggagcacttcataatttcagacgcagttttcttcagatgcttta 22387126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 25675551 - 25675654
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| | |  | ||||||| |||||  |||||||||||||||||||||||||||||    
T  25675551 tgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgttagttcagaagcacttt-tagcttcagacgcagttttcttcagatgc 25675649  T
Q  291 tttag 295  Q
    |||||    
T  25675650 tttag 25675654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 25679627 - 25679730
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| | |  | ||||||| |||||  |||||||||||||||||||||||||||||    
T  25679627 tgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgttagttcagaagcacttt-tagcttcagacgcagttttcttcagatgc 25679725  T
Q  291 tttag 295  Q
    |||||    
T  25679726 tttag 25679730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 147 - 292
Target Start/End: Original strand, 5845426 - 5845571
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatg-aactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca--tta 241  Q
    |||||||  ||||||||||| ||||||||| |||||||||| ||| ||||||||||||  ||||||||| ||||| ||||||||||||| |  ||  |||    
T  5845426 ctgatcacttgtagcttctggtgatgatatcgcttctgatgaaaccttgcttctgatggtcttctgcttctgatgacgtcattacttcagaatcacttta 5845525  T
Q  242 gaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |   |||||||| |||||  |||||||||||||||||||||||||||||||    
T  5845526 g---cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 5845571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 22309179 - 22309281
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||||| ||| ||||| |||||||||| || ||||| | |  |||||||||  ||||| |||||||||||||||||||||||||||||    
T  22309179 tgcttctgatggacttcttcttctgatgacgtcattactccagaggcacttgttacttcagaagtacttcttagcttcagacgcagttttcttcagatgc 22309278  T
Q  291 ttt 293  Q
    |||    
T  22309279 ttt 22309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17047733 - 17047827
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttaga 97  Q
    |||| ||||||||||||||||||| ||  ||  |||||||| ||||||||||||||||| ||||| ||| |||||||||||| |||| |||||||||    
T  17047733 tacatttgtactttgtcaactcttaaaaaag--acaagcacccagtgcttttcaaatgaccgttgccacttcccttttgatctttcgttctcttaga 17047827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 20635929 - 20636049
Alignment:
Q  174 atagcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcaga 271  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||| |||||| |||||| ||||| || |   |||||| | ||||||||| |||||||    
T  20635929 atagcttctgatgaactt-gcttctgatgaactt-tgcttctgatgacgtcatcacttcagaggcactttgt--cttcaggagcacttcataacttcaga 20636024  T
Q  272 cgcagttttcttcagatgctttagg 296  Q
    ||||||| |||||||||||||||||    
T  20636025 cgcagttctcttcagatgctttagg 20636049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 25686540 - 25686438
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||  | |  | ||||||| |||||  |||||||||||||||||||||||||||||    
T  25686540 tgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcgcttgttagttcagaagcactt--tagcttcagacgcagttttcttcagatgc 25686443  T
Q  291 tttag 295  Q
    |||||    
T  25686442 tttag 25686438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 31572592 - 31572812
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||| ||||||||||||   || || ||||||  ||||||||||||||||| || |||||  ||||||||||  || ||||  |||||||||||    
T  31572592 tacacttgtagtttgtcaactctgataacgaaggacaaatactcagtgcttttcaaaagaccgttgatacctccctttcaattcttcattctcttagacg 31572691  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactt-tgcttc 197  Q
    ||||| |    || | ||||||| |||||    | || || ||| | |||||||| ||||||||||| ||||||||| |||||||||||| || ||||||    
T  31572692 aggttgaaacgaaaa-acagctcctttgaatcgttagtttaaatttactgatcaaatgtagcttctggtgatgatatcgcttctgatgaaattctgcttc 31572790  T
Q  198 tgatgaacttctgcttttgatg 219  Q
    |||||||||||||||| |||||    
T  31572791 tgatgaacttctgcttctgatg 31572812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 20029766 - 20029629
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  20029766 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 20029668  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     | ||||||| |||||||||||||||||||||||||||||    
T  20029667 gagcacttca-agcttcagacgcagttttcttcagatgct 20029629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 20062517 - 20062380
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  20062517 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 20062419  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     | ||||||| |||||||||||||||||||||||||||||    
T  20062418 gagcacttca-agcttcagacgcagttttcttcagatgct 20062380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 29765923 - 29766024
Alignment:
Q  192 tgcttctgatgaactt-ctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    |||||||||||||||| |||||| ||||| ||||||  ||||| ||||| | |  ||||||||| |||||| ||||||||||||||||||||||||||||    
T  29765923 tgcttctgatgaactttctgcttctgatgacgtcat--cttcagaggcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatg 29766020  T
Q  290 cttt 293  Q
    ||||    
T  29766021 cttt 29766024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 7585988 - 7585918
Alignment:
Q  278 tttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||||||||||| |||||| ||||||||| || ||| |||||| ||||||||||||||||||||||||    
T  7585988 tttcttcagatgcttctaggtttctcttcttgttgattcatttgctttcttttgttcttccaagacctatt 7585918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 18925583 - 18925469
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||    
T  18925583 gcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgc 18925487  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  18925486 agttttcttcagatgctt 18925469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 192 - 370
Target Start/End: Complemental strand, 25722764 - 25722601
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| |||||| ||||||  |||| | |  | ||||||| |||||  ||||||||||| |||||||||||||||||    
T  25722764 tgcttctgatgaacttctgcttctgatgacgtcatcacttcagtggcacttgttagttcagaagcacttt-tagcttcagacccagttttcttcagatgc 25722666  T
Q  291 tttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||| || ||               |||||||||  |||||||||||||||||||||||||| | ||||||||||||||    
T  25722665 tttagcttcct---------------tttgctctccattgttcttccaagacctattgaaattgaataactttgcctatg 25722601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 25788035 - 25788173
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  25788035 tgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcacttcag-cttcag 25788133  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  25788134 aagcacttta-agcttcagacgcagttttcttcagatgctt 25788173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 17608423 - 17608222
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    ||||||||||||||||||||||||   ||| |||||||||  |  ||||||||||||||| ||||| |||||  | |||  || |||||| ||||||| |    
T  17608423 tacacttgtactttgtcaactctt-tttgaaggacaagcatcccatgcttttcaaatgaatcgttgccacctttcctttagtctttcgctttcttagatg 17608325  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttct 198  Q
    ||||| | | ||| | ||||||  ||||| | ||||| ||  |||||||||| |||| |||||||| ||||| ||| |||||||||||||| ||||||||    
T  17608324 aggttgaatccaataaacagcttatttgaaacttcaggttgcatcttctgatgaactatagcttctggtgat-atacagcttctgatgaac-ttgcttct 17608227  T
Q  199 gatga 203  Q
    |||||    
T  17608226 gatga 17608222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 12952833 - 12952775
Alignment:
Q  313 ttcctttgctctcttttgttctt-ccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||| |||||||||||||||||| | ||||||||||||||    
T  12952833 ttcctttgctctctattgttctttccaagacctattgaaattgaataactttgcctatg 12952775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 18555747 - 18555804
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||||||||| |||||||||||  |||| ||||||||||    
T  18555747 ttcctttgctctctattgttcttccaagatctattgaaattgtttaattttgcctatg 18555804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 18825940 - 18825883
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||   ||||||||||||||||| |||||||| ||||||||||||||||    
T  18825940 ttcctttgctcttcattgttcttccaagaccttttgaaattgattaactttgcctatg 18825883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 25735254 - 25735201
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||  |||||||||||||||||||||||||| | ||||||||||||||    
T  25735254 tttgctctccattgttcttccaagacctattgaaattgaataactttgcctatg 25735201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 29765713 - 29765933
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    ||||||||||||||||||||||| | || || ||||||| || ||||| | ||||||||| |||||  ||||||||||  || ||||| |||  ||||||    
T  29765713 tacacttgtactttgtcaactctgttaacgaaggacaagtacccagtgttcttcaaatgaccgttgatacctccctttcaattcttcgttcttctagacg 29765812  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg-aactttgcttc 197  Q
    | ||| |   | | | |||||||||||||   ||||| || ||| | || ||||  |||||||||| |||||| |||||||||||||| ||| |||||||    
T  29765813 atgttga-aacgaaaaacagctcttttgaatcttcagtttaaatttactaatcacttgtagcttctggtgatggtatagcttctgatgaaaccttgcttc 29765911  T
Q  198 tgatgaacttctgcttttgatg 219  Q
    |||||  ||||||||| |||||    
T  29765912 tgatggtcttctgcttctgatg 29765933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 29766028 - 29766085
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| | | ||||||||||||    
T  29766028 ttcctttgctctccattgttcttccaagacctattgaaattgaatgactttgcctatg 29766085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 4293114 - 4293215
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||||| || |  |||||| || |  ||| | ||||||||||||||||||||||||||    
T  4293114 tgcttctgatgaacttctgcttctgatgacgtcatttcttcagaggcactttgttacttcaaaagc--ttcttggcttcagacgcagttttcttcagatg 4293211  T
Q  290 cttt 293  Q
    ||||    
T  4293212 cttt 4293215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 7375620 - 7375483
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatg--aactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||  ||| |||||||| |||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  7375620 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctaatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 7375522  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
       ||||||| |||||||||||||||||||||||||||||    
T  7375521 gggcacttca-agcttcagacgcagttttcttcagatgct 7375483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 27166251 - 27166150
Alignment:
Q  192 tgcttctgatgaactt-ctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    |||||||||||||||| |||||| ||||| ||||||  ||||| ||||| | |  |||||| || |||||| |||||||||| |||||||||||||||||    
T  27166251 tgcttctgatgaactttctgcttctgatgacgtcat--cttcagaggcacttgttacttcataagcacttcttagcttcagatgcagttttcttcagatg 27166154  T
Q  290 cttt 293  Q
    ||||    
T  27166153 cttt 27166150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 4292904 - 4293124
Alignment:
Q  1 tacacttgtactttgtcaactct--tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagac 98  Q
    |||||||||||||||||||||||  | || || ||||||| |  || |||||||||||||| |||||  ||||||||||  || ||||| |||||||||     
T  4292904 tacacttgtactttgtcaactctgatgaa-gaaggacaagtatccaatgcttttcaaatgaccgttgatacctccctttcaattcttcgttctcttagat 4293002  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatg-aactttgctt 196  Q
    |||||| |    || | | ||||| |||||   ||||| || ||| | |||||||| || |||||||| |||||||||||||||||||| || | |||||    
T  4293003 gaggttgaaacgaaaa-atagctcctttgaatcttcagtttaaatttactgatcaattgcagcttctggtgatgatatagcttctgatgaaaatgtgctt 4293101  T
Q  197 ctgatgaacttctgcttttgatg 219  Q
    ||||||  ||||||||| |||||    
T  4293102 ctgatgctcttctgcttctgatg 4293124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 16265015 - 16264945
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    |||||||||||||||||||||||| | | ||| ||| || |||||||||||||| |||||||| ||||||||    
T  16265015 gcagttttcttcagatgctttaggattc-ctttttgttgattcctttgctctctattgttctttcaagacct 16264945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 5845576 - 5845626
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| |||||    
T  5845576 ttcctttgctctccattgttcttccaagacctattgaaattgattgacttt 5845626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 292
Target Start/End: Original strand, 12828065 - 12828165
Alignment:
Q  191 ttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    ||||||||||||| ||||||||| ||||| | |||| |||||| ||||| |  |  |||||||| ||||| | |||||||||||||||||||||||||||    
T  12828065 ttgcttctgatgaccttctgcttctgatgacatcatcacttcagaggcacttcag-cttcagaagcacttta-agcttcagacgcagttttcttcagatg 12828162  T
Q  290 ctt 292  Q
    |||    
T  12828163 ctt 12828165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 18834338 - 18834296
Alignment:
Q  328 ttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  18834338 ttgttcttccaagaccttttgaaattgattaactttgcctatg 18834296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 25722828 - 25722754
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatg 219  Q
    |||||||| ||||||||||| |||||||| ||||||||||||| | |||||||||||  |||||||||| |||||    
T  25722828 ctgatcaaatgtagcttctggtgatgatacagcttctgatgaaatgttgcttctgatagacttctgcttctgatg 25722754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8653838 - 8653915
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||| | |||||||| ||||||||| |||||  ||||||||||    
T  8653838 tacacttgtactttgtcaactctgttaacgaaggacaagtattcagtgctcttcaaatgaccgttgatacctcccttt 8653915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 10547473 - 10547424
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  10547473 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 10547424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 13928646 - 13928695
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  13928646 ttcctttgctctccattgttcttccaagacctattgaaattgattgactt 13928695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 22309290 - 22309343
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||  |||||||||||||||||||||||||| | | ||||||||||||    
T  22309290 tttgctctccattgttcttccaagacctattgaaattgaatgactttgcctatg 22309343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 25519182 - 25519239
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| | | ||||||| ||||    
T  25519182 ttcctttgctctccattgttcttccaagacctattgaaattgaatgactttgcatatg 25519239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 25675673 - 25675714
Alignment:
Q  329 tgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  25675673 tgttcttccaagacctattgaaattgaataactttgcctatg 25675714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 329 - 370
Target Start/End: Original strand, 25679749 - 25679790
Alignment:
Q  329 tgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  25679749 tgttcttccaagacctattgaaattgaataactttgcctatg 25679790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 25800760 - 25800806
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  25800760 acttcagaagcactt--tagcttcagacgcagttttcttcagatgcttt 25800806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27166461 - 27166384
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    |||||||||||||||||||||||   ||||| ||||||| || ||||||| ||||||||| |||||  ||||||||||    
T  27166461 tacacttgtactttgtcaactctgataatgaaggacaagtacacagtgctcttcaaatgaccgttgatacctcccttt 27166384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 31572786 - 31572843
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||| |||||||||||||    
T  31572786 gcttctgatgaacttctgcttctgatgaacttctacttctgatgacgtcattacttca 31572843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 32761754 - 32761639
Alignment:
Q  177 gcttctgatgaacttt-gcttctgatgaacttctgcttttgatgc-gtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| |||| |||||||| || ||||||||| |||||  ||||| |||||||| ||| |  |  |||||||| ||||| | ||||||||||||    
T  32761754 gcttctgatgaccttttgcttctgacgagcttctgcttctgatgatgtcatcacttcaaatgcacttcag-cttcagaagcacttta-agcttcagacgc 32761657  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  32761656 agttttcttcagatgctt 32761639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 17043048 - 17043096
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||| || ||||||||||||||||||||||| |||||    
T  17043048 acttcagaagcacttcctaacttcagacgcagttttcttcagaggcttt 17043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 293
Target Start/End: Complemental strand, 17745471 - 17745439
Alignment:
Q  261 atagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||||||||||||||||||||||||||||||    
T  17745471 atagcttcagacgcagttttcttcagatgcttt 17745439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 18925464 - 18925424
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  18925464 ttcctttgctctccattgttcttccaagacctattgaaatt 18925424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 18925631 - 18925557
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||| ||||||||||| ||||||| | ||||||||||||   ||||||||||||||| ||||||||| |||||    
T  18925631 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaactttgcttctgatgaccttctgcttctgatg 18925557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 30120070 - 30119972
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  |||||||| ||||| | ||||||||||||||||||||||||||||    
T  30120070 tgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcagaagcacttta-agcttcagacgcagttttcttcagatgc 30119973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 30401313 - 30401261
Alignment:
Q  318 ttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||| ||||||| |||| ||| ||||||||| ||||||||||||||||    
T  30401313 ttgctctctattgttctaccaaaaccaattgaaattgattaactttgcctatg 30401261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 16123294 - 16123250
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||    
T  16123294 cttcagaaacactt--tagcttcagacgcaattttcttcagatgctt 16123250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 17577548 - 17577504
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||    
T  17577548 cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 17577504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 8654120 - 8654150
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  8654120 tagcttcagacgcagttttcttcagatgctt 8654150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 9112356 - 9112276
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  9112356 gtagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 9112276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 9122993 - 9122913
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  9122993 gtagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 9122913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 10402870 - 10402825
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||    
T  10402870 cttcagaagcacttta-agcttcagacgcagttttcttcagatgctt 10402825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 10547508 - 10547478
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  10547508 tagcttcagacgcagttttcttcagatgctt 10547478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 13913472 - 13913502
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  13913472 tagcttcagacgcagttttcttcagatgctt 13913502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 17745636 - 17745562
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatg 219  Q
    |||| ||| ||||||||||| ||||||||| |||||||||||| | ||||||||||||  ||||||||| |||||    
T  17745636 ctgaacaattgtagcttctggtgatgatatcgcttctgatgaaatattgcttctgatggtcttctgcttctgatg 17745562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 25986408 - 25986481
Alignment:
Q  149 gatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||| |||||||||| |||| ||||| ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  25986408 gatcaaatgtagcttcttgtgaagatattgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 25986481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 25986539 - 25986569
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  25986539 tagcttcagacgcagttttcttcagatgctt 25986569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 9395 - 9366
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  9395 agcttcagacgcagttttcttcagatgctt 9366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7375776 - 7375699
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  7375776 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 7375699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 350
Target Start/End: Original strand, 8654155 - 8654192
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaa 350  Q
    |||||||||||||  |||||||||||||||||||||||    
T  8654155 ttcctttgctctccattgttcttccaagacctattgaa 8654192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11147267 - 11147190
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  11147267 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 11147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 12382367 - 12382396
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  12382367 agcttcagacgcagttttcttcagatgctt 12382396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12827871 - 12827948
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  12827871 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 12827948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 16122947 - 16122898
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||| ||  |||||||||||||||||||||||||| ||| ||||    
T  16122947 ttcctttgctttccattgttcttccaagacctattgaaattgattgactt 16122898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 16122997 - 16122951
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||  |||||||||||||| |||||||||||||||||    
T  16122997 acttcagaagcactt--tagcttcagacgcaattttcttcagatgcttt 16122951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 16123245 - 16123196
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||| ||  |||||||||||||||||||||||||| ||| ||||    
T  16123245 ttcctttgctttccattgttcttccaagacctattgaaattgattgactt 16123196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 17745431 - 17745386
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||  |||||||||||||||||||||||||| ||| ||||    
T  17745431 tttgctctccattgttcttccaagacctattgaaattgattgactt 17745386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 18826256 - 18826068
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||| ||| || ||||| | ||||||||| |||||  ||||||||||  || ||||| |||  ||||||    
T  18826256 tacacttgtactttgtcaactctgataacgaaggataagtacccagtgttcttcaaatgaccgttgatacctccctttcaattcttcgttcttctagacg 18826157  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa 188  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||  ||||||||||| ||||||||||||||||||||||    
T  18826156 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaa 18826068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20029922 - 20029845
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  20029922 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 20029845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20062673 - 20062596
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  20062673 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 20062596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25787879 - 25787956
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  25787879 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 25787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25986260 - 25986337
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||   ||||||||| |||| |||| |||||| ||||||||||    
T  25986260 tacacttgtactttgtcaactctgttaacgaaggacaaatgctcagtgctattcatatgaccgttggtacctcccttt 25986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 26044547 - 26044596
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaactt-tgcttctgatga 203  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  26044547 tgtagcttctggtgatgatatagcttctgatgaccttctgcttctgatga 26044596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 27166146 - 27166089
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||| ||||||||| ||||| | | ||||||||||||    
T  27166146 ttcctttgctctccattgttcttcccagacctatttaaattgaatgactttgcctatg 27166089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 31572838 - 31572884
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||  ||||||||||| ||||||||||||||||||||    
T  31572838 acttcagaagcactt--tagcttcagacacagttttcttcagatgcttt 31572884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 7375477 - 7375437
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  7375477 ttcctttgctttccattgttcttccaagacctattgaaatt 7375437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 10971394 - 10971327
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgctt 213  Q
    |||||| ||||||||||| ||| ||||| ||||||||||||  | ||||||||||||| |||||||||    
T  10971394 gatcaaatgtagcttctggtgaagatattgcttctgatgaaaaccttgcttctgatgaccttctgctt 10971327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 11146947 - 11146911
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  11146947 tttgctttctattgttcttccaagacctattgaaatt 11146911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #108
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 12382401 - 12382441
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  12382401 ttcctttgctttccattgttcttccaagacctattgaaatt 12382441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #109
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 12828170 - 12828210
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  12828170 ttcctttgctttccattgttcttccaagacctattgaaatt 12828210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #110
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 17064637 - 17064685
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||| || ||||||||||||||||||| ||| |||||    
T  17064637 acttcagaagcacttcctaacttcagacgcagttttctttagaggcttt 17064685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #111
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 18378592 - 18378624
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagaccta 345  Q
    ||||||| |||||||||||||||||||||||||    
T  18378592 ttcctttactctcttttgttcttccaagaccta 18378624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 25788178 - 25788218
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  25788178 ttcctttgctttccattgttcttccaagacctattgaaatt 25788218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #113
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 25800815 - 25800851
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  25800815 tttgctctccattgttcttccaagacctattgaaatt 25800851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #114
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 30119966 - 30119926
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  30119966 ttcctttgctttccattgttcttccaagacctattgaaatt 30119926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 18774689 - 18774318
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18774689 tacaattgtattttgtcaactcttcaatgaaggacaaacacccagtgcttttcaaatgaacgttggcacctcccttttgatcctttgctctcttagacga 18774590  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaacttt-gcttct 198  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  18774589 ggttaacttaaagagacagctcttttgagatttcagattgaatcttcagatcaactgtagcttctggtgatcatatagcttctgatgaaattttgcttct 18774490  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||||||| ||||| ||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18774489 gatgaactt-tgcttctgatgacgtcattacttcagaggcactcgaaacttcagaaacacttcatagcttcagacgcagttttcttcatatgctttaggt 18774391  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18774390 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaattgattaactttgcctatg 18774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 16819386 - 16819014
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctttt-caaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||||||| |||||||| |||| |||||| |||||||||    
T  16819386 tacacttgtactttgtcaactcttcaataaaggacaagcacccagtgctttttcaaatgaacgttggcaactccctttcgatctttcgctttcttagacg 16819287  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  16819286 aggttaacttcaagagacaactcttttgagatttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 16819187  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    |||||| ||||||||| ||||| ||||||| ||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16819186 tgatga-cttctgcttctgatgacgtcatttcttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagatgctttagg 16819088  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16819087 ttcctcttcttgatgggtcctttgctctcttttgttcttccaagacctattgaaattgattaactttgcctatg 16819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 19244025 - 19244394
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||| ||||| |||||   || |||||||||||||||||    
T  19244025 tacaattgtactttgtcaactcttcaacaaaggacaagcacccagtgcttttcaaatgaacgttgacaccttcctttgagtctttcgctctcttagacga 19244124  T
Q  101 ggttaacttcaag--agacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttc 197  Q
    ||||||   |||   | ||||| | ||||| | |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||| || |||||    
T  19244125 ggttaaaaccaaataaaacagc-catttgaaacttcaaattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagtt-gcttc 19244222  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    |||||||||| ||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  19244223 tgatgaactt-tgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagatgctttagg 19244321  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    || |||||||||||| || |||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  19244322 ttcctcttcttgatgatttctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgcctatg 19244394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 23509364 - 23509737
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||| ||| | |||||||||| |||||||||||||||||    
T  23509364 tacacttgtactttgtcaactcttcaatgaggtaaaagcacccagtgcttttcaaacgaacgttgacactttccttttgatcattcgctctcttagacga 23509463  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttc-----------------t 182  Q
    ||||||| | ||||  ||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||                 |    
T  23509464 ggttaacataaagaatcagctcttttgagatttcagattgaatcttctgatccactgtagcttctggtgatgatatagcttctgatgaaatcttgcttat 23509563  T
Q  183 gatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
    |||||||||||||| |||||||||||||||| ||||| ||||| ||||||| ||||| | |||||||||||| |||||||||||||||||||||||||||    
T  23509564 gatgaactttgcttttgatgaacttctgcttctgatgacgtcactacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttc 23509663  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |               ||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  23509664 ttcagatgctttagct---------------ttcttttgctctctattgttcttccaagacctattgaaattgattgactttgcctatg 23509737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 8997290 - 8996984
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| | | | || ||||||||||||||||||||||||||| | ||||||||||||||||| |||| |||||    
T  8997290 tacacttgtactttgtcaactcttcaatgaggtaaaggtacccagtgcttttcaaatgaacgttggcactttccttttgatccttcgctttcttggacga 8997191  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata-----------------gcttct 182  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||||||||                 ||||||    
T  8997190 ggttaacttcaagagacagctc-tttgagatttcagattggatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 8997092  T
Q  183 gatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||| | ||||||| |||| |||||||||||||||||||||||||||    
T  8997091 gatgaactttgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaactttagaagcacttcatagcttcagacgcagttttc 8996992  T
Q  282 ttcagatg 289  Q
    ||||||||    
T  8996991 ttcagatg 8996984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 18007093 - 18006694
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  18007093 tacacttgtactttgtcaactcttcaacaagg-acaagcacccagtgcttttcaaattaacgttggcacctcccttttagtccttcgctctcttagacga 18006995  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata---------------gcttctga 184  Q
    |||||| | ||| ||||| ||||||||| | | ||| || ||||||||||||||||||||||||| |||||||||||               ||||||||    
T  18006994 ggttaaatccaaaagacaactcttttgaaactccaggttgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagttgcttctga 18006895  T
Q  185 tgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttc--------------- 268  Q
    |||||||||||||||||| | || ||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||||| | ||||                   
T  18006894 tgaactttgcttctgatg-agttttgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcaggcgcagttttctt 18006796  T
Q  269 -agacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcct 367  Q
     |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||    
T  18006795 cagacgcagttttcttcagatgctttaggttcctcttattgatggttcctttgctctcttttgttcttccaagacctattg-aattgatcaactttgcct 18006697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 55651571 - 55651926
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||||||||  || ||||| | ||||||||||    
T  55651571 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttgatacctccctttcaattcttcgttttcttagacga 55651670  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| | |||||||| |||| |||||| |||||||||||||||||||||| | ||||||||    
T  55651671 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaatttactgatcaattgtaacttctggtgatgatatagcttctgatgaaatcttgcttct 55651769  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||| |||||||||| ||||| |||| |||||||| ||||| | |  ||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  55651770 gatggacttctgcttctgatgacgtcgttacttcagaggcacttgttacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 55651866  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  55651867 -------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcatatg 55651926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 49001991 - 49001636
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||  ||||  ||||||||||  || ||||| | ||||||||||    
T  49001991 tacacttgtactttgtcaactcttcaatgaaggacaagcacccaatgcttttcaaatgactgttgatacctccctttcaattcttcgttttcttagacga 49001892  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| |||||||||||||||||||||| |||||| ||||||||||||||| | || |||||    
T  49001891 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaattttctgatcaactgtagcttctggtgatgaaatagcttctgatgaaatcttacttct 49001793  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||| |||||||||| ||| | ||||||||||||| ||||| | |  ||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  49001792 gatggacttctgcttctgacgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 49001696  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  49001695 -------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 49001636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 14778476 - 14778322
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||  || ||||||| |||| ||||    
T  14778476 tacaattgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttctaatgaacgttggcaccttccttttagtctttcgctcccttaaacga 14778377  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    |||||| | ||| ||||||||| || |||  ||||| || ||||||||||||||||    
T  14778376 ggttaaatccaatagacagctc-ttagagtcttcaggttgaatcttctgatcaact 14778322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 11536092 - 11536404
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| || ||||||||||||||||| |||||  ||||||||||  || ||||| |||||||||||    
T  11536092 tacacttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 11536191  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa---------- 188  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||  ||||||||||| ||||||||||||||||||||||              
T  11536192 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 11536290  T
Q  189 -------ctt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
           ||| |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| |||||| ||||||||||||||||||    
T  11536291 tgatggtcttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcttagcttcagacgcagttt 11536390  T
Q  280 tcttcagatgcttt 293  Q
    ||||||||| ||||    
T  11536391 tcttcagattcttt 11536404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 39525963 - 39525861
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  39525963 tgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgc 39525864  T
Q  291 ttt 293  Q
    |||    
T  39525863 ttt 39525861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 14710812 - 14710707
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||| ||||||  || ||||||| |||| ||||    
T  14710812 tacaattgtactttgtcaactcttcaatgaaggacaagcacctagtgcttttctaatgaacgttggcaccttccttttagtctttcgctcccttaaacga 14710713  T
Q  101 ggttaa 106  Q
    ||||||    
T  14710712 ggttaa 14710707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17993827 - 17993723
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacc-tcccttttgatccttcgctctcttagacg 99  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||  || |||||| ||||||| |    
T  17993827 tacaattgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaagtgaacgttggcaccttcccttttagtctttcgctttcttagatg 17993728  T
Q  100 aggtt 104  Q
    |||||    
T  17993727 aggtt 17993723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 33378720 - 33378819
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||| |||| |||||| |||||||||||||| ||||| ||| || ||||||||||||||||||||||||||||||||||| || || || |||||||    
T  33378720 cttcagaggcagatttctttagatgctttaggtttctctttttgttgattcctttgctctcttttgttcttccaagacctattaaatttgatcaactttg 33378819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 11515491 - 11515593
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| || ||| |||||||||||||||||||||||||||||    
T  11515491 tgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcatttcttagcttcagacgcagttttcttcagatgc 11515590  T
Q  291 ttt 293  Q
    |||    
T  11515591 ttt 11515593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 36210136 - 36209988
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtta 105  Q
    |||||||||||||||||| |||||| |||||| ||| || |||||||||||  ||||||||||||| || |||  || |||||| |||||||||||||||    
T  36210136 ttgtactttgtcaactct-caatgaaggacaaacacccaatgcttttcaaacaaacgttggcaccttccctttagtctttcgctttcttagacgaggtta 36210038  T
Q  106 acttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    | | ||| ||||| ||  ||||||| ||||| || ||||||||||||||||    
T  36210037 aatccaatagacaact-atttgagacttcaggttgaatcttctgatcaact 36209988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 10300991 - 10301093
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||||| | |  |||||| || |||||| || ||||||||||||||||||||||||||    
T  10300991 tgcttctgatgaacttctgcttctgatgacgtcattgcttcagaggcacttgttacttcataagcacttcttaacttcagacgcagttttcttcagatgc 10301090  T
Q  291 ttt 293  Q
    |||    
T  10301091 ttt 10301093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 293
Target Start/End: Complemental strand, 31266644 - 31266515
Alignment:
Q  166 gtgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatgc-gtcattacttcaaaggcattagaaacttcagaaacacttcata 263  Q
    ||||||||||||||||||||||| | ||||||||||||  ||||| ||| |||||  |||||||||||| || || | |  |||| |||| |||||| ||    
T  31266644 gtgatgatatagcttctgatgaaatcttgcttctgatggtcttctacttctgatgatgtcattacttcagagacacttgttactttagaagcacttctta 31266545  T
Q  264 gcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||||||||||| ||||||||||||    
T  31266544 gcttcagacgcagttttattcagatgcttt 31266515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 36209873 - 36209790
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| |||||||||| |||| |||||| ||||||||| || |||||| ||||||||||||||||||||||||||||    
T  36209873 cttcagaggcagatttcttcagacgcttctaggtttctcttcttgttgattccttagctctcttttgttcttccaagacctatt 36209790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 149 - 293
Target Start/End: Complemental strand, 17198285 - 17198140
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaa 244  Q
    |||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| ||||| |   |    
T  17198285 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaggcact-tca 17198187  T
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
     |||||||| |||||  ||||||||||| ||||||||||||||||||||    
T  17198186 gcttcagaagcactt--tagcttcagacacagttttcttcagatgcttt 17198140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 15207426 - 15207204
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||||||| ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  15207426 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgctttccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 15207327  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg--aactttgct 195  Q
    |||||| |  |  ||| ||||||  ||||| | ||||| ||  || | ||||| || |||| ||||| |||||||| | ||||||||||  ||| |||||    
T  15207326 gaggttgaaat-gagaaacagctactttgaaacttcagtttatatttactgattaaatgtaacttctggtgatgattttgcttctgatgaaaaccttgct 15207228  T
Q  196 tctgatgaacttctgcttttgatg 219  Q
    |||||||| ||||||||| |||||    
T  15207227 tctgatgagcttctgcttctgatg 15207204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 17993576 - 17993486
Alignment:
Q  280 tcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||| |||||| ||||||  | || ||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||    
T  17993576 tcttcagatgcttctaggtttctcttcacgttgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgtctatg 17993486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 24713677 - 24713898
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    |||||||||||||||||||||||   || || ||||||| |||||||||| ||||||||| ||||   ||||||||||  || ||||| || ||||||||    
T  24713677 tacacttgtactttgtcaactctgataacgaaggacaagtactcagtgctcttcaaatgaccgttaatacctccctttcaattcttcgttcttcttagac 24713776  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgctt 196  Q
    |||||| |   ||||| ||| ||  |||||   ||||| || ||| | |||| ||| |||||||||| |||||||||| |||||||||||| | ||||||    
T  24713777 gaggttga-aacaagaaacaactactttgaatcttcagtttaaatttactgaacaattgtagcttctagtgatgatatcgcttctgatgaaatcttgctt 24713875  T
Q  197 ctgatgaacttctgcttttgatg 219  Q
    ||||||  ||||||||| |||||    
T  24713876 ctgatggtcttctgcttctgatg 24713898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5873616 - 5873721
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||| | | ||||| ||||||| |||||||||| ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  5873616 tacacttgtactttgtcaactatgttaatgaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 5873715  T
Q  99 gaggtt 104  Q
    ||||||    
T  5873716 gaggtt 5873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 11515314 - 11515469
Alignment:
Q  32 ggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaacttcaagagacagctcttttgagat 131  Q
    ||||||| |||||||||||||||||||| |||||  ||||||||||  || ||||| |||||||||||||||| |   | | | ||||||| |||||       
T  11515314 ggacaagtactcagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttctcttagacgaggttga-aacgaaaaacagctcctttgaatc 11515412  T
Q  132 ttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa 188  Q
    ||||| |||||  | |||||||  |||||||||| |||||||||||||||||||||||    
T  11515413 ttcag-tttaaattactgatcacttgtagcttctggtgatgatatagcttctgatgaa 11515469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 18077762 - 18077624
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||||||   ||| |   | ||||||    
T  18077762 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttcaggagcact-tcagcttcag 18077664  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  18077663 aagcacttta-agcttcagacgcagttttcttcagatgctt 18077624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 4987716 - 4987830
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||| |||||| |||||| ||||| |   | |||||||| || ||  ||| |||||||||    
T  4987716 gcttctgatgaccttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcact-tcagcttcagaagcattt--tagtttcagacgc 4987812  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  4987813 agttttcttcagatgctt 4987830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 19581700 - 19581798
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||||||||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  19581700 tgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 19581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 10300781 - 10300969
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||  ||||| |||||||||||||| |||||  ||||||||||  || ||| | |||  ||||||    
T  10300781 tacacttgtactttgtcaactctgataacgaaggacaaatactcaatgcttttcaaatgaccgttgatacctccctttcaattctttgttcttctagacg 10300880  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa 188  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||| ||||||||||| ||||||||||||||||||||||    
T  10300881 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcaattgtagcttctggtgatgatatagcttctgatgaa 10300969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 11515597 - 11515654
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||    
T  11515597 ttcctttgctctccattgttctttcaagacctattgaaattgattgactttgcctatg 11515654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 11519629 - 11519686
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||    
T  11519629 ttcctttgctctccattgttctttcaagacctattgaaattgattgactttgcctatg 11519686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 370
Target Start/End: Complemental strand, 14778208 - 14778116
Alignment:
Q  278 tttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||| |||||| ||||||  | || |||||||||||||||||||| ||| |||||||||| ||||| || ||||||| |||||    
T  14778208 tttcttcagatgcttctaggtttctcttcacgttgattcctttgctctcttttgtttttctaagacctatt-aaattgatcaactttgtctatg 14778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 19581487 - 19581592
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | ||  | ||||||| |||||||| ||| ||||||| |||||  ||||||||||| || ||||| || ||||||||    
T  19581487 tacacttgtactttgtcaactctgttaacaaaggacaagtactcagtgttttccaaatgatcgttgatacctcccttttaattcttcgttcttcttagac 19581586  T
Q  99 gaggtt 104  Q
    ||||||    
T  19581587 gaggtt 19581592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 31266511 - 31266454
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||| ||||||||||||| ||| ||||||||||||    
T  31266511 ttcctttgctctccattgttcttccaaaacctattgaaattgattgactttgcctatg 31266454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 39525857 - 39525800
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||| ||||||| ||| ||||||||||||    
T  39525857 ttcctttgctctccattgttcttccaagacctaatgaaattaattgactttgcctatg 39525800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 4987520 - 4987742
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||  ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  4987520 tacacttgtactttgtcaactctcttaacgaaggacaaatactcagtgcacttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 4987619  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgat--gaactttgct 195  Q
    |||||| |  |  ||| ||||||  |||||   ||||| || ||| | | |||||| |||||||||| |||||||||| ||| |||||   ||| |||||    
T  4987620 gaggttgaaat-gagaaacagctactttgaatcttcagtttgaatttacggatcaaatgtagcttctggtgatgatatcgctcctgatcaaaaccttgct 4987718  T
Q  196 tctgatgaacttctgcttttgatg 219  Q
    |||||||| ||||||||| |||||    
T  4987719 tctgatgaccttctgcttctgatg 4987742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 11519577 - 11519625
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  11519577 acttcagaagcatttcttagcttcagacgcagttttcttcagatgcttt 11519625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 5873828 - 5873927
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||| | ||||||||| ||||| ||||||||||||| | ||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  5873828 tgcttctgatcagcttctgcttctgatgacgtcattacttcataagcactccag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 5873924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 293
Target Start/End: Original strand, 16305502 - 16305647
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaa 245  Q
    |||||| ||||||||||| ||||||| | ||||||||||| | | |||||||||||| ||||| ||| ||||| ||| || |||||| | ||| |  |      
T  16305502 gatcaattgtagcttctggtgatgatttcgcttctgatgaccatctgcttctgatgagcttctacttctgatgacgttatcacttcagaagcactccag- 16305600  T
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||||    
T  16305601 cttcagaagcacttt-tagcttcagacgcagttttcttcagatgcttt 16305647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 24713888 - 24713981
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| | ||| |      ||||||| |||||  |||||||||||||||||||||||||||||    
T  24713888 tgcttctgatggacttctgcttctgatgacgtcattacttcagaagcact------ttcagaagcactt--tagcttcagacgcagttttcttcagatgc 24713979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 11536411 - 11536465
Alignment:
Q  316 ctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||  |||||||||||||||||||||||||| ||| ||||| ||||||    
T  11536411 ctttgctctccattgttcttccaagacctattgaaattgattgactttccctatg 11536465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 14835920 - 14835806
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| ||||||||||||  |||||||| ||||| |||||| |||||| ||||| |  |  || ||||| |||||  |||||||||||||    
T  14835920 gcttctgatgaccttctgcttctgatgagtttctgcttctgatgacgtcatcacttcagaggcacttcat-ctgcagaagcactt--tagcttcagacgc 14835824  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  14835823 agttttcttcagatgctt 14835806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 25657539 - 25657676
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| ||| || | ||| |  |  ||||||    
T  25657539 tgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgataaccttctgcttctgatgacgtcatcactccagatgcacttcag-cttcag 25657637  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  25657638 aagcactt--tagcttcagacgcagttttcttcagatgctt 25657676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 40454205 - 40454068
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  | || |||||||||| ||||||||| ||||| |||||| ||| || | ||| |  |  ||||||    
T  40454205 tgtagcttctggtgatgatttcgcttctgatgaaaaccttacttctgatgaccttctgcttctgatgacgtcatcactccagatgcacttcag-cttcag 40454107  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  40454106 aagcactt--tagcttcagacgcagttttcttcagatgctt 40454068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 47152092 - 47151797
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||| ||| | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  47152092 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagggctctccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 47151993  T
Q  99 gaggtt--aacttcaagagacagctcttttgagatttcagatttaatctt-ctgatcaactgtagcttct-gtgatgatatagcttctgatg--aacttt 192  Q
    ||||||  ||  | ||   ||| ||  |||||   ||||| || ||| || ||  |||| |||| ||||| |||||||| | ||||||||||  ||  ||    
T  47151992 gaggttgaaatgttaa---acaactactttgaatcttcagtttgaattttactattcaaatgtaacttctggtgatgattttgcttctgatgaaaatctt 47151896  T
Q  193 gcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    ||||||||||| ||||||||| ||||| |||||| |||||| ||||| |   | |||||||| |||||  ||||||||||||||||||||||||||||||    
T  47151895 gcttctgatgaccttctgcttctgatgacgtcatcacttcagaggcact-tcagcttcagaagcactt--tagcttcagacgcagttttcttcagatgct 47151799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 4987834 - 4987875
Alignment:
Q  312 gttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  4987834 gttcctttgctctccattgttcttccaagacctattgaaatt 4987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 5873931 - 5873980
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  5873931 ttcctttgctctccattgttcttccaagacctattgaaattgattgactt 5873980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 8996975 - 8996918
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||| ||||||||| |||||||||||||||||||||||||| | ||| ||| ||||||    
T  8996975 ttccattgctctctattgttcttccaagacctattgaaattgaataatttttcctatg 8996918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10695886 - 10695991
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||| ||| | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  10695886 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagggctctccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 10695985  T
Q  99 gaggtt 104  Q
    ||||||    
T  10695986 gaggtt 10695991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 10696170 - 10696219
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  10696170 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 10696219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10909655 - 10909760
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||| ||| | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  10909655 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagggctctccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 10909754  T
Q  99 gaggtt 104  Q
    ||||||    
T  10909755 gaggtt 10909760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 10909939 - 10909988
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  10909939 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 10909988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 20648490 - 20648410
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  20648490 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttca 20648410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 24713986 - 24714035
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  24713986 ttcctttgctctccattgttcttccaagacctattgaaattgattgactt 24714035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 47151791 - 47151742
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  47151791 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 47151742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 3391005 - 3391045
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  3391005 ttcctttgctctccattgttcttccaagacctattgaaatt 3391045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 5023138 - 5023196
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatg---aactttgcttctgatgaacttctg 210  Q
    ||||||||||| ||||||||||||||||||||   ||||||||||||||||| ||||||    
T  5023138 tgtagcttctggtgatgatatagcttctgatgaaaaactttgcttctgatgaccttctg 5023196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 15207111 - 15207071
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  15207111 ttcctttgctctccattgttcttccaagacctattgaaatt 15207071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 15207160 - 15207115
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||||    
T  15207160 cttcagaagcactt--tagcttcagacgcagttttcttcagatgcttt 15207115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 17198136 - 17198096
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  17198136 ttcctttgctctccattgttcttccaagacctattgaaatt 17198096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 19581803 - 19581843
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  19581803 ttcctttgctctccattgttcttccaagacctattgaaatt 19581843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 40470368 - 40470324
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||    
T  40470368 cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 40470324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 8182639 - 8182594
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||    
T  8182639 cttcagaagcacttta-agcttcagacgcagttttcttcagatgctt 8182594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 17918456 - 17918536
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  17918456 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 17918536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 17929104 - 17929184
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| |||| |||||||||| |||||||||||||    
T  17929104 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttccgcttttgatgacgtcattacttca 17929184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3370962 - 3371039
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||  ||||||||| |||||  ||||||||||    
T  3370962 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgcacttcaaatgaccgttgatacctcccttt 3371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3390702 - 3390779
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||  ||||||||| |||||  ||||||||||    
T  3390702 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgcacttcaaatgaccgttgatacctcccttt 3390779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Complemental strand, 3499471 - 3499442
Alignment:
Q  265 cttcagacgcagttttcttcagatgcttta 294  Q
    ||||||||||||||||||||||||||||||    
T  3499471 cttcagacgcagttttcttcagatgcttta 3499442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 203
Target Start/End: Complemental strand, 9751444 - 9751415
Alignment:
Q  174 atagcttctgatgaactttgcttctgatga 203  Q
    ||||||||||||||||||||||||||||||    
T  9751444 atagcttctgatgaactttgcttctgatga 9751415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 10301101 - 10301154
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||  |||||||||||||||||||||||||| | | ||||||| ||||    
T  10301101 tttgctctccattgttcttccaagacctattgaaattgaatgactttgcatatg 10301154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 14835966 - 14835894
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  14835966 atcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 14835894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14836116 - 14836039
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  14836116 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgatcgttgatacctcccttt 14836039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 25009290 - 25009319
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  25009290 agcttcagacgcagttttcttcagatgctt 25009319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 10696034 - 10696129
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca 238  Q
    ||| |||| |||| |||||| ||||||| || |||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| |||||    
T  10696034 ctgttcaaatgtaacttctggtgatgatttatcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggca 10696129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 10909803 - 10909898
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca 238  Q
    ||| |||| |||| |||||| ||||||| || |||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| |||||    
T  10909803 ctgttcaaatgtaacttctggtgatgatttatcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggca 10909898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 14835801 - 14835761
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  14835801 ttcctttgctctacattgttcttccaagacctattgaaatt 14835761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 15474992 - 15474944
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgcttta 294  Q
    |||||| | ||||||||| ||||||||| |||||||||||||| |||||    
T  15474992 cttcaggagcacttcataacttcagacgtagttttcttcagattcttta 15474944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 16305651 - 16305691
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  16305651 ttcctttgctctccattgttcttccacgacctattgaaatt 16305691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 16317876 - 16317916
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||| ||||||||||||||    
T  16317876 ttcctttgctctccattgttcttccacgacctattgaaatt 16317916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 25009328 - 25009364
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  25009328 tttgctctccattgttcttccaagacctattgaaatt 25009364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31266810 - 31266706
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  |||||| ||   || ||||| ||| |||||||    
T  31266810 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcctttacaattcttcgttcttttagacg 31266711  T
Q  100 aggtt 104  Q
    |||||    
T  31266710 aggtt 31266706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 39526121 - 39525985
Alignment:
Q  51 ttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaacttcaagaga--cagctcttttgagatttcagatttaatcttct 148  Q
    ||||||||| |||||  ||||||||||  || ||||| |||||||||||||||| |    |||| |  |||||| |||||   ||||| || ||| | ||    
T  39526121 ttcaaatgaccgttgatacctccctttcaattcttcgttctcttagacgaggttga----aagaaaaacagctcctttgaatcttcagtttaaatttact 39526026  T
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa 188  Q
    |||||  ||||||||||| ||||||||||||||||||||||    
T  39526025 gatcacttgtagcttctggtgatgatatagcttctgatgaa 39525985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 93)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 364
Target Start/End: Complemental strand, 20168191 - 20167828
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20168191 tacatttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 20168092  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctg 199  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  20168091 ggttaacttcaagagacagctcttttgagatttcagattgaatcttctgaacaactataacttctggtgatgatatagcttctgatgaactttgcttctg 20167992  T
Q  200 atgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggtt 298  Q
    ||| |||||||||| ||||| | |||| |||||| ||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  20167991 atg-acttctgcttctgatgacatcatcacttcagaggcacttgaaacttcagaaacacttcataacttcagatgcagttttcttcagatgctttaggtt 20167893  T
Q  299 actcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  20167892 cctcttcttgatggttcctttgctctcttttgttcttccaagacatattg-aattgattaactttg 20167828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 36097234 - 36096847
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||    
T  36097234 tacacttgtactttgtcaactcttcaataaaggacaagcacgcagtgcttttcaaaagaacgttggcaactccctttcgatctttcgctctcttagacga 36097135  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagctt-ctgtgatgatatagcttctgatgaact-ttgcttct 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||    
T  36097134 ggttaacttcaagagacagctcttttgagatttcagattgaatcttctgatcaactgtagcttccggtgatgatatagcttctgatgaaatcttgcttct 36097035  T
Q  199 gatga---------------acttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttct 282  Q
    |||||               |||||||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  36097034 gatgaactttgcttctgatgacttctgcttctgatgacgtcattacttcagaggcactcgaaacttcagaagcacttcatagcttcagacgcagttttct 36096935  T
Q  283 tcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36096934 tcatatgctttaggttcctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaattgattaactttgcctatg 36096847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 36095777 - 36095390
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||    
T  36095777 tacacttgtactttgtcaactcttcaataaaggacaagcacgcagtgcttttcaaaagaacgttggcaactccctttcgatctttcgctctcttagacga 36095678  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagctt-ctgtgatgatatagcttctgatgaact-ttgcttct 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||    
T  36095677 ggttaacttcaagagacagctcttttgagatttcagattgaatcttctgatcaactgtagcttccggtgatgatatagcttctgatgaaatcttgcttct 36095578  T
Q  199 gatga---------------acttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttct 282  Q
    |||||               |||||||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||||||||||||| ||||||||||||    
T  36095577 gatgaactttgcttctgatgacttctgcttctgatgacgtcattacttcagaggcactcgaaacttcagaagcacttcatagcttcaaacgcagttttct 36095478  T
Q  283 tcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36095477 tcatatgctttaggttcctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaattgattaactttgcctatg 36095390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 13533945 - 13534317
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  13533945 tacacttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttggcacttcccttttgatcattcgctctcttagacga 13534044  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgat-------------- 185  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||                  
T  13534045 ggttaacttcaagagacaactcttttgagatttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttatgatgaaatcttgcttat 13534144  T
Q  186 ---gaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
       |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||    
T  13534145 gaagaactttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgcagttttc 13534244  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||                | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13534245 ttcagatgcttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 13534317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 13523218 - 13523590
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  13523218 tacacttgtactttgtcaactctttaatgagggacaatcacccagtacttttcaaatgaacgttggcacttcccttttgatccttcgctctcttagacaa 13523317  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgat-------------- 185  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||                  
T  13523318 ggttaacttcaagagacaactcttttgagatttcagattgaatcttctgatcaactgtatcttctggtgatgatatagcttctgatgaaatctttcttct 13523417  T
Q  186 ---gaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
       |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||    
T  13523418 gaagaactttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgcagttttc 13523517  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||                |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13523518 ttcagatgcttta----------------ggtttctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 13523590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 35543253 - 35543048
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  35543253 tacacttgtactttgtcaactcttcaatgagagataagcacccagtgcttttcaaatgaacgttagcacttcccttttgatccttcgctctcttagacga 35543154  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  35543153 ggttaacttcaagagacagctcttttgagatttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 35543054  T
Q  199 gatgaa 204  Q
    ||||||    
T  35543053 gatgaa 35543048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 20417028 - 20416732
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||  ||  |||| | ||||||||||    
T  20417028 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaatttttcgttttcttagacga 20416929  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
      |||     || | ||||||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  20416928 tattagaacgaaaa-acagctcctttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 20416830  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttag 295  Q
    |||| |||||||||| ||||| ||||||||||||||||||| | |  ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  20416829 gatggacttctgcttctgatgacgtcattacttcaaaggcacttgttacttcagaagcactttatagcttcagacgcagttttcttcagatgctttag 20416732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 177 - 370
Target Start/End: Complemental strand, 35543042 - 35542864
Alignment:
Q  177 gcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgca 275  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||| | | ||||||||||||||||||||||||||||||||    
T  35543042 gcttctgatgaactttgcttctgatgaacttctgcttctgatgacgtcataacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgca 35542943  T
Q  276 gttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||||||                |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  35542942 gttttcttcagatgcttta----------------ggttcctttgctctctattgttcttccaagacctattgaaattgaataactttgcctatg 35542864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 106245 - 105949
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| || ||||||||||||||||| |||||  ||||||||||  || ||||  |||||||||||    
T  106245 tacacttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcattctcttagacg 106146  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatctt-ctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgctt 196  Q
    ||||| |    || | ||||||| |||||   ||||| || ||  || |||||||  ||||||||||| |||||||||||||||||||||| | ||||||    
T  106145 aggttgaaacgaaaa-acagctcatttgaatcttcagtttaaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaaatcttgctt 106047  T
Q  197 ctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||  ||||||||| ||||| ||||||||||||| ||||||| |  ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  106046 ctgatgctcttctgcttctgatgacgtcattacttcagaggcatttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgcttt 105949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 32754079 - 32754454
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||| ||||  || |||||||||||||| |||||  ||||||||||  || ||||| | ||| ||||||    
T  32754079 tacacttgtactttgtcaactcttcaatgaaggacgagcatccaatgcttttcaaatgaccgttgatacctccctttcaattcttcgttttctcagacga 32754178  T
Q  101 ggttaacttcaagaga-cagctcttttgagatttcagatttaa--tcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa-------- 188  Q
    || |||    || | | |||||| ||||| | ||||| | |||  | |||||||||||||||||||||| |||||||| |||||||||||||            
T  32754179 ggataaaacgaaaaaaacagctcctttgaaacttcagttataaaatattctgatcaactgtagcttctggtgatgatacagcttctgatgaaatgttgct 32754278  T
Q  189 ---------ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtt 278  Q
             ||||||||||||||| ||||||||| ||||| | |||| |||||| ||||| | |||||||||||| ||||||||| ||||||| ||||||    
T  32754279 tctgatggactttgcttctgatgatcttctgcttctgatgacatcatcacttcagaggcacttgaaacttcagaagcacttcataacttcagatgcagtt 32754378  T
Q  279 ttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||| ||||                | |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  32754379 ttcttcagatgtttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcatatg 32754454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13405145 - 13405299
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||  |  ||||||| |||||||||    
T  13405145 tacaattgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttctaatgaacgttggcaccttccttttagtatttcgctcccttagacga 13405244  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    |||||| | ||| ||||| ||  ||||| | ||||| || ||||| ||||||||||    
T  13405245 ggttaaatccaatagacaact-atttgaaacttcaggttgaatctcctgatcaact 13405299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 344
Target Start/End: Original strand, 23478404 - 23478740
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||| |  ||| ||||||||| ||  ||||||||||||||| ||||| |||||  |  ||  || |||| | |||||||  |||||    
T  23478404 ttgtactttgtcaactct-ctttgaaggacaagcattccatgcttttcaaatgaatcgttgccacctttcagttagtctttcgttttcttagatcaggtt 23478502  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatga 203  Q
    || | ||| | ||||||  ||||| | | ||| ||  |||||||||| |||||||||||||| |||| ||| |||||||||||||||| ||||||| |||    
T  23478503 aaatccaataaacagcttatttgaaactccaggttgcatcttctgatgaactgtagcttctggtgat-atacagcttctgatgaactt-gcttctgttga 23478600  T
Q  204 acttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttact 301  Q
    |||| ||||| ||||  |||||| |||||| || || || |   |||||| | |||||||  |||| |||||||||||||||||||||||||||| | ||    
T  23478601 actt-tgcttctgataacgtcatcacttcagagacactttgt--cttcaggagcacttcaacgcttgagacgcagttttcttcagatgctttaggcttct 23478697  T
Q  302 cttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||| ||| || ||||||||||||||||||||||||||||||||    
T  23478698 ctttttgttgattcctttgctctcttttgttcttccaagacct 23478740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 177 - 293
Target Start/End: Complemental strand, 20624697 - 20624580
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  |||||||||||||||  |||||||||||||    
T  20624697 gcttctgatgaacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaaacacttt-tagcttcagacgc 20624599  T
Q  275 agttttcttcagatgcttt 293  Q
    |||||||||||||||||||    
T  20624598 agttttcttcagatgcttt 20624580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 40228957 - 40229062
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  40228957 cttcagaggcagatttcttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt-aaattgattaacttt 40229055  T
Q  364 gcctatg 370  Q
    | |||||    
T  40229056 gtctatg 40229062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 273 - 370
Target Start/End: Complemental strand, 20214947 - 20214850
Alignment:
Q  273 gcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||| ||||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  20214947 gcagatttcttcagatgcttctaggtttctcttcttgatgattccttagctctcttttgttcttccaagacctatt-aaattaattaactttgtctatg 20214850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 40228688 - 40228870
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||| |||| |||||| |||||| ||| || ||||||||||| |||||||||||||| || |||  || |||||| ||||||||||    
T  40228688 tacacttgtactttgtcagctct-caatgaaggacaatcacccaatgcttttcaaacgaacgttggcaccttccctttagtctttcgctttcttagacga 40228786  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctga 184  Q
    |||| | | ||| ||||||||  ||||| | |||||||| ||||| ||||||||||  || |||| ||| | |||||||||||||    
T  40228787 ggttgaatccaatagacagct-gtttgaaacttcagattgaatctcctgatcaacttcagtttctggtgtttatatagcttctga 40228870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 1915697 - 1915781
Alignment:
Q  264 gcttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    |||||||| |||| ||||||||||||||| ||| || ||||||||| || |||||||||||||||||||||||||||||||||||    
T  1915697 gcttcagaggcagatttcttcagatgcttctagatttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 1915781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 370
Target Start/End: Original strand, 21414544 - 21414705
Alignment:
Q  194 cttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| |||||||||| ||||| ||||||||||||| |||||   |  ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  21414544 cttctgatggacttctgcttctgatgacgtcattacttcagaggcacatgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgctt 21414643  T
Q  293 taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    | | ||                |||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  21414644 tggatt----------------cctttgctctccattgttcttccaagacctattgaaattgattgactttgcctatg 21414705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 364
Target Start/End: Complemental strand, 40032608 - 40032509
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||| || |||||||||||||||||||||||||||||| |||| ||||| || ||||||    
T  40032608 cttcagaggcagatttcttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacttatt-aaattgatcaacttt 40032510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 40032869 - 40032695
Alignment:
Q  9 tactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaact 108  Q
    ||||||||||||||| ||| || ||||||||||  | ||||||||||| |||||||||||||| || |||  || |||||| |||||||||||||| | |    
T  40032869 tactttgtcaactct-caaagaaggacaagcaccaaatgcttttcaaacgaacgttggcaccttccctttagtctttcgctttcttagacgaggttgaat 40032771  T
Q  109 tcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctga 184  Q
     ||| ||||||||  ||||| | |||||||| ||||| ||||||||||  || |||| ||| | |||||||||||||    
T  40032770 ccaatagacagct-gtttgaaacttcagattgaatctcctgatcaacttcagtttctggtgtttatatagcttctga 40032695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 1915452 - 1915600
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtta 105  Q
    |||||||||||||||||| ||| || |||||| ||| || ||||||||||| |||||||||||||| |||| |   | |||||| ||||||||||||||     
T  1915452 ttgtactttgtcaactct-caaagaaggacaaacacccaatgcttttcaaacgaacgttggcaccttccttatagactttcgctttcttagacgaggttg 1915550  T
Q  106 acttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    | | ||| ||||||||  ||||| | |||||||| ||||| ||||||||||    
T  1915551 agtccaatagacagct-atttgaaacttcagattgaatctcctgatcaact 1915600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 13405384 - 13405489
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||    || ||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  13405384 cttcagaggcagatttcttcagatgcttctaggtttctcttcacattgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaacttt 13405482  T
Q  364 gcctatg 370  Q
    | |||||    
T  13405483 gtctatg 13405489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 17447025 - 17447140
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||| |||||| |||||| | ||| |   | |||||||| |||||  |||||||||||||    
T  17447025 gcttctgatgaccttctgcttctgatgaacttctgcttctgatgacgtcatcacttcagaagcacttttagcttcagaagcactt--tagcttcagacgc 17447122  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  17447123 agttttcttcagatgctt 17447140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 20215218 - 20215121
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||| |||||| |||||||||| || |||||||||||  ||||||||||||| || |||  || |||||| ||||||||||||||    
T  20215218 ttgtactttgtcaactct-caatgaaggacaagcacccaatgcttttcaaacaaacgttggcaccttccctttagtctttcgctttcttagacgaggtt 20215121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 21414332 - 21414644
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||  || |||||||||||||| || |||||  ||||||||||  || ||||| |||||||||||    
T  21414332 tacacttgtactttgtcaactctgataacgaaggacaattacccagtgcttttcaaacgaccgttgatacctccctttcaattcttcgttctcttagacg 21414431  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctt----- 191  Q
    ||||| |   | | | ||||||| |||||   ||||| || ||| | |||| ||| |||||||||| |||||||||||| ||||||||||  |||         
T  21414432 aggttga-aacgaaaaacagctcctttgaatcttcagtttaaatttactgaacaattgtagcttctggtgatgatataggttctgatgaaatcttgcttc 21414530  T
Q  192 -----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
               | ||||||||| |||||||||| ||||| ||||||||||||| |||||   |  ||||||||| |||||| ||||||||||||||||||    
T  21414531 tgatggtcttctacttctgatggacttctgcttctgatgacgtcattacttcagaggcacatgttacttcagaagcacttcttagcttcagacgcagttt 21414630  T
Q  280 tcttcagatgcttt 293  Q
    ||||||||||||||    
T  21414631 tcttcagatgcttt 21414644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 17457641 - 17457756
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | |||||||| |||||  |||||||||||||    
T  17457641 gcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcacttttagcttcagaagcactt--tagcttcagacgc 17457738  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  17457739 agttttcttcagatgctt 17457756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 24926429 - 24926566
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca--ttagaaacttc 249  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | |||  ||||   ||||    
T  24926429 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcactttag---cttc 24926525  T
Q  250 agaaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    || | ||||||| ||||||||||||| |||||||||||||||    
T  24926526 aggagcacttca-agcttcagacgcaattttcttcagatgct 24926566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 36228710 - 36228572
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgat-gcgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| |||| ||||||| |||||| | ||| |   | ||||||    
T  36228710 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatggcgtcatcacttcagatgcact-tcagcttcag 36228612  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | |||||||||||||||||||| |||||||||    
T  36228611 aagcacttta-agcttcagacgcagttttctacagatgctt 36228572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 36084432 - 36084295
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| |||||||||  |||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  36084432 tgtagcttctggtgatgatatcacttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 36084334  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    || ||||| | |||||||||||||||||||||||||||||    
T  36084333 aagcacttta-agcttcagacgcagttttcttcagatgct 36084295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 10754465 - 10754384
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  10754465 tgtagcttctggtgatgatatagcttctgatgaaaaactttgcttctgatgaccttctgcttctgatgacgtcatcacttca 10754384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 292
Target Start/End: Original strand, 21706257 - 21706403
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattag 242  Q
    |||||||| |||| |||||| || |||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||| | ||||| |      
T  21706257 ctgatcaaatgtaacttctggtggtgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcactttagaggcacttc 21706356  T
Q  243 aaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |  |||||||| |||||  |||||||||||||||||||||||||||||||    
T  21706357 ag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 21706403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 23406573 - 23406279
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||| || ||||| || ||||||||    
T  23406573 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttttaattcttcgttcttcttagac 23406474  T
Q  99 gaggttaacttcaagagacagctcttttgagat-ttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg--aactttgc 194  Q
    |||||| |  |  ||| | ||||  |||| ||| ||||| || ||| | |  ||||| || ||||||| ||||||||   ||||||||||  ||| ||||    
T  23406473 gaggttgaaat-gagaaatagctactttg-gatcttcagtttgaatttacgaatcaattgaagcttctggtgatgattacgcttctgatgaaaaccttgc 23406376  T
Q  195 ttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| ||||||||| ||||| | |||| |||||| ||||| |   | |||||||| |||||  |||||||||||||||||||||||||||||||    
T  23406375 ttctgatgaccttctgcttctgatgacatcatcacttcagaggcact-ccagcttcagaagcactt-ttagcttcagacgcagttttcttcagatgctt 23406279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 8521812 - 8521675
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  ||||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  8521812 tgtagcttctggtgatgatttcgcttctgatgaaaactttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 8521714  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  ||||||||||| |||||||||||||||||||    
T  8521713 aagcactt--tagcttcagacacagttttcttcagatgctt 8521675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 370
Target Start/End: Complemental strand, 20416727 - 20416673
Alignment:
Q  316 ctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||||    
T  20416727 ctttgctctctattgttcttccaaaaccaattgaaattgattaactttgcctatg 20416673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 105945 - 105888
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||| ||| ||| ||||||||||||    
T  105945 ttcctttgctctccattgttcttccaagacctattgagattgattgactttgcctatg 105888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 17457445 - 17457667
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctct-cttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||| | | ||||||| |||||  ||||||||||  || ||||| | | |||||||    
T  17457445 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgttctccaaatgaccgttgatacctccctttcaattcttcgtttttcttagac 17457544  T
Q  99 gaggttaacttcaagagacagctcttttgagat-ttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgc 194  Q
    |||||| |  | | || ||||||  |||| ||| ||||| || ||| | | |||||| ||||||||||| ||||||||| ||||||||||||  | ||||    
T  17457545 gaggttgaaatga-gaaacagctactttg-gatcttcagtttgaatttacggatcaaatgtagcttctggtgatgatatcgcttctgatgaaaaccttgc 17457642  T
Q  195 ttctgatgaacttctgcttttgatg 219  Q
    ||||||||| ||||||||| |||||    
T  17457643 ttctgatgaccttctgcttctgatg 17457667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 23392647 - 23392532
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| ||||| |||||| ||||||||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||    
T  23392647 gcttctgatgaccttctgcttttgatgagcttctgcttctgatgacgtcatcacttcagaggcactccag-cttcagaagcacttt-tagcttcagacgc 23392550  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  23392549 agttttcttcagatgctt 23392532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 291
Target Start/End: Original strand, 24983750 - 24983864
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca--ttagaaacttcagaaacacttcatagcttcagac 272  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||| |||||| |||||| | |||  ||||   |||||| | ||||||| ||||||||||    
T  24983750 gcttctgatgagcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcactttag---cttcaggagcacttca-agcttcagac 24983845  T
Q  273 gcagttttcttcagatgct 291  Q
    |||||||||||||||||||    
T  24983846 gcagttttcttcagatgct 24983864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 43043961 - 43044099
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| | |||| | ||| |   | ||||||    
T  43043961 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcatttcagaagcact-tcagcttcag 43044059  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||| ||||||||||||||||||    
T  43044060 aagcacttta-agcttcagacgtagttttcttcagatgctt 43044099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 34052086 - 34051792
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | ||||| ||||||| |||||||| | | ||||||| |||||  ||||||||||  || |||||  | ||||||||    
T  34052086 tacacttgtactttgtcaactctgttaatgaaggacaagtactcagtgttctccaaatgaccgttgatacctccctttcaattcttcgtacttcttagac 34051987  T
Q  99 gaggtt--aacttcaagagacagctcttttgagatttcagatttaatctt-ctgatcaactgtagcttct-gtgatgatatagcttctgatg--aacttt 192  Q
    ||||||  ||  | ||   ||||||  |||||   ||||| || ||| || | |||||| |||||||||| |||||||| | ||||||||||  ||| ||    
T  34051986 gaggttgaaatgttaa---acagctactttgaatcttcagtttgaattttacggatcaattgtagcttctggtgatgatttcgcttctgatgaaaacctt 34051890  T
Q  193 gcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    |||||| |||| ||||||||| ||||| |||||| |||||| | ||| |   | |||||||| |||||  ||||||||||||||||||||||||||||||    
T  34051889 gcttct-atgaccttctgcttctgatgacgtcatcacttcagaagcact-ccagcttcagaagcactt-ttagcttcagacgcagttttcttcagatgct 34051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 344
Target Start/End: Original strand, 33933598 - 33933669
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||||||||||| | |||| | | ||||| ||| || |||||||||||||| |||||||||||||||||    
T  33933598 gcagttttcttcagacgatttaagcttctctttttgttgattcctttgctctctattgttcttccaagacct 33933669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 1109435 - 1109572
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  1109435 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 1109533  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  1109534 aagcactt--tagcttcagacgcagttttcttcagatgctt 1109572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19478128 - 19478023
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  19478128 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 19478029  T
Q  99 gaggtt 104  Q
    ||||||    
T  19478028 gaggtt 19478023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 20797666 - 20797528
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaactt--tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  |  |||||||||||| ||||||||| ||||| |||||| ||||||   ||| |  |  ||||||    
T  20797666 tgtagcttctggtgatgatttcgcttctgatgaaaatcttgcttctgatgaccttctgcttctgatgacgtcatcacttcaggagcacttcag-cttcag 20797568  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  20797567 aagcacttta-agcttcagacgcagttttcttcagatgctt 20797528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23392843 - 23392738
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| | |||  ||||||||||| || ||||| || ||||||||    
T  23392843 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgacctttgatacctcccttttaattcttcgttcttcttagac 23392744  T
Q  99 gaggtt 104  Q
    ||||||    
T  23392743 gaggtt 23392738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24983554 - 24983631
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | ||||| ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  24983554 tacacttgtactttgtcaactctgttaatgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 24983631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 34771882 - 34771802
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  34771882 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttca 34771802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 34782827 - 34782747
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  34782827 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttca 34782747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 37406467 - 37406418
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  37406467 ttcctttgctctccattgttcttccaagacctattgaaattgattgactt 37406418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 291
Target Start/End: Original strand, 43622198 - 43622297
Alignment:
Q  191 ttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    ||||||||||||| ||||||||| ||||| ||| || |||||| | ||| |  || |||||| | ||||||| |||||||||||||||||||||||||||    
T  43622198 ttgcttctgatgagcttctgcttctgatgacgttatcacttcagatgcactt-aagcttcaggagcacttca-agcttcagacgcagttttcttcagatg 43622295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 17447145 - 17447185
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  17447145 ttcctttgctctccattgttcttccaagacctattgaaatt 17447185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 17457761 - 17457801
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  17457761 ttcctttgctctccattgttcttccaagacctattgaaatt 17457801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 19463783 - 19463743
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  19463783 ttcctttgctctccattgttcttccaagacctattgaaatt 19463743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 19477813 - 19477773
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  19477813 ttcctttgctctccattgttcttccaagacctattgaaatt 19477773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 20551786 - 20551649
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | |  |||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  20551786 tgtagcttctggtgatgatatcgcttctgatgaaaacctctcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 20551688  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     | ||||| | |||||||||||||||||||||||||||||    
T  20551687 gagcacttta-agcttcagacgcagttttcttcagatgct 20551649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 21660491 - 21660539
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgcttta 294  Q
    |||||| | ||||||||| ||||||||||||||||||||||| ||||||    
T  21660491 cttcaggagcacttcataacttcagacgcagttttcttcagacgcttta 21660539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 24926572 - 24926612
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  24926572 ttcctttgctttcctttgttcttccaagacctattgaaatt 24926612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 24983870 - 24983910
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  24983870 ttcctttgctttcctttgttcttccaagacctattgaaatt 24983910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 34062448 - 34062408
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  34062448 ttcctttgctctccattgttcttccaagacctattgaaatt 34062408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 34062597 - 34062453
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaa 244  Q
    |||||| ||||||||||| ||||||| | ||||||||||||  | |||||||| |||| ||||||||| ||||| |||||| |||||| | ||| |  |     
T  34062597 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttct-atgaccttctgcttctgatgacgtcatcacttcagaagcactccag 34062499  T
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
     |||||||| ||| |  |||||||||||||||||||||||||||||||    
T  34062498 -cttcagaagcacgtt-tagcttcagacgcagttttcttcagatgctt 34062453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 42394876 - 42394831
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||    
T  42394876 acttcagaagcacttca--gcttcagacgcagttttcttcagatgctt 42394831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 341
Target Start/End: Original strand, 4887303 - 4887370
Alignment:
Q  274 cagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaaga 341  Q
    |||||||||||||| |||||| | | | ||| ||| || |||||||||||||| ||||||||||||||    
T  4887303 cagttttcttcagacgctttaagcttccctttttgttgattcctttgctctctattgttcttccaaga 4887370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 11207803 - 11207724
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||| ||||||||||||||| |||||||| | |||||  || ||  || || ||| |||||||||||||||||||||    
T  11207803 cttcagaggcagttttcttcagacgctttaggcttctctttatgttgaatctttcgctttcttttgttcttccaagacct 11207724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 344
Target Start/End: Original strand, 11994210 - 11994281
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    |||||||||||||||||||||| | | | ||| ||| || ||||||||||||   |||||||||||||||||    
T  11994210 gcagttttcttcagatgctttaagcttccctttttgttgattcctttgctcttaattgttcttccaagacct 11994281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 20562311 - 20562245
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  20562311 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatg 20562245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 21703495 - 21703539
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||    
T  21703495 cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 21703539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 24983710 - 24983776
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  24983710 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatg 24983776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 17446978 - 17447051
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||| ||||||||||| |||||||||  |||||||||||  | ||||||||||||| ||||||||| |||||    
T  17446978 gatcaaatgtagcttctggtgatgatatcacttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 17447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 366
Target Start/End: Complemental strand, 20624573 - 20624523
Alignment:
Q  316 ctttgctctcttttgttcttccaagacctattgaaatttattaactttgcc 366  Q
    ||||||||||  |||||||||||||||| ||||||||| ||| ||||||||    
T  20624573 ctttgctctccattgttcttccaagacccattgaaattgattgactttgcc 20624523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 27623057 - 27623137
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  27623057 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 27623137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 30070188 - 30070261
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||| ||||||||||| ||| ||||| ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  30070188 gatcaaatgtagcttctggtgaagatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 30070261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 31448399 - 31448369
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  31448399 tagcttcagacgcagttttcttcagatgctt 31448369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17446829 - 17446906
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||| | | ||||||| |||||  ||||||||||    
T  17446829 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgttctccaaatgaccgttgatacctcccttt 17446906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19464098 - 19463993
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||| | | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  19464098 tacacttgtactttgtcaactttgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 19463999  T
Q  99 gaggtt 104  Q
    ||||||    
T  19463998 gaggtt 19463993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20551942 - 20551865
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  20551942 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 20551865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 21517589 - 21517560
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  21517589 agcttcagacgcagttttcttcagatgctt 21517560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 21519922 - 21519893
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  21519922 agcttcagacgcagttttcttcagatgctt 21519893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 21703547 - 21703584
Alignment:
Q  316 ctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  21703547 ctttgctctccattgttcttccaagacctattgaaatt 21703584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21706109 - 21706214
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||| | ||||| ||| |||||  ||||||||||  || ||||| || ||||||||    
T  21706109 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgttcttcaagtgaccgttgatacctccctttcaattcttcgttcttcttagac 21706208  T
Q  99 gaggtt 104  Q
    ||||||    
T  21706209 gaggtt 21706214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34062747 - 34062670
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||| | | ||||||| |||||  ||||||||||    
T  34062747 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgttctccaaatgaccgttgatacctcccttt 34062670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36084588 - 36084511
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  36084588 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 36084511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 42394951 - 42394871
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  42394951 tgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttca 42394871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 20551643 - 20551603
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  20551643 ttcctttgctttccattgttcttccaagacctattgaaatt 20551603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 20562151 - 20562111
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  20562151 ttcctttgctttccattgttcttccaagacctattgaaatt 20562111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20624891 - 20624787
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||| ||||||||   || || ||||||| || |||||| |||||||||| |||||  ||||||||||  || ||||  ||||||||| |    
T  20624891 tacacttgtactttatcaactctgataacgaaggacaagtacccagtgcctttcaaatgaccgttgatacctccctttcaattcttcattctcttagatg 20624792  T
Q  100 aggtt 104  Q
    |||||    
T  20624791 aggtt 20624787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 21517551 - 21517515
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  21517551 tttgctctccattgttcttccaagacctattgaaatt 21517515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 203
Target Start/End: Original strand, 21660437 - 21660465
Alignment:
Q  175 tagcttctgatgaactttgcttctgatga 203  Q
    |||||||||||||||||||||||||||||    
T  21660437 tagcttctgatgaactttgcttctgatga 21660465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 23392527 - 23392487
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  23392527 ttcctttgctttccattgttcttccaagacctattgaaatt 23392487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 23406274 - 23406234
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  23406274 ttcctttgctttccattgttcttccaagacctattgaaatt 23406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 34051787 - 34051747
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  34051787 ttcctttactctccattgttcttccaagacctattgaaatt 34051747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 36084289 - 36084249
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  36084289 ttcctttgctttccattgttcttccaagacctattgaaatt 36084249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 37406635 - 37406560
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||  ||||||||| |||||    
T  37406635 ctgatcaattgtagcttctggtgatgatgttgcttctgatgaaaaccttgcttctgatggtcttctgcttctgatg 37406560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 43622303 - 43622343
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  43622303 ttcctttgctttccattgttcttccaagacctattgaaatt 43622343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 46180929 - 46180573
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46180929 tacacttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttggcacttcccttttgatccttcgctctcttagacga 46180830  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    ||||||||| |||| ||| ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  46180829 ggttaacttaaagaaacaactcttttgagattccagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 46180730  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||||||||||||| ||||| ||||||||||||| ||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||||       
T  46180729 gatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgcaattttcttcagatgcttta--- 46180633  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  46180632 -------------ggttcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 46180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 45070703 - 45070317
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||| ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  45070703 tacatttgtaatttgtcaactcttcaatgaaggacaggcacccagtgcttttcaaatgaacgttggcacctcccatttgatctttcgctctcttagacga 45070604  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg-aactttgcttct 198  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||| ||||||||||||||||||||| || |||||||||    
T  45070603 ggttaacttcaagagacagctcttttgagatttcagattgaatcttctgaacaactttaacttctggtgatgatatagcttctgatgaaattttgcttct 45070504  T
Q  199 gatgaa---------------cttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttct 282  Q
     |||||               ||||||||| ||||| |||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||    
T  45070503 tatgaactttgcttctgatgtcttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaaacacttcatagcttcagacgcagttttct 45070404  T
Q  283 tcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  45070403 tcagatgctttaggttcctcttcttgatggttcctttgctctcttttgttcttccaagacctattg-aattgattaacattgcctatg 45070317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 28474259 - 28474626
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||| |||||   || |||||||||||||||||    
T  28474259 tacaattgtactttgtcaactcttcaacaaaggacaagcacccagtgcttttcaaatgaacgttggcaccttcctttgagtctttcgctctcttagacga 28474358  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctg 199  Q
    |||||| | ||| | ||||| | ||||| | |||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  28474359 ggttaaatccaataaacagc-catttgaaacttcagattgaatcttctgatcaactgtagcttctggtgatcatatagcttctgatgaactttgcttctg 28474457  T
Q  200 atgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggtt 298  Q
    ||| | |||||||| ||||| ||||||||||| | | ||| | |||||||||||| ||||||| |  ||||||| ||||||| |||||||||||||||||    
T  28474458 atg-agttctgcttctgatgacgtcattactttagatgcacttgaaacttcagaagcacttcaaaatttcagacacagtttt-ttcagatgctttaggtt 28474555  T
Q  299 actcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
     |||||||||||| || |||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  28474556 cctcttcttgatgatttctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgcctatg 28474626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 22610024 - 22609671
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| || |||||||    
T  22610024 tacacttgtactttgtcaactcttcaatgaggtacaagcactcagtgcttttcaaatgagcgttggcacttcccttttgatcctttgctttcgtagacga 22609925  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactt-tgcttct 198  Q
    ||||||| | ||||  |||||| |||| ||||||||||| |||| ||||||||||||||||||||| |||  || | |||||||||| |||| |||||||    
T  22609924 ggttaacgtaaagaatcagctc-tttgtgatttcagattgaatcctctgatcaactgtagcttctgatga-aatcttgcttctgatggacttctgcttct 22609827  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||  |||||||||| ||||| |||||| |||||| | ||| | |  ||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  22609826 gatagacttctgcttctgatgacgtcatcacttcagatgcacttgttacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 22609730  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  22609729 -------------gattcctttgctctctattgttcttccaagacctattg-aattgattaactttgcctatg 22609671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 20799096 - 20799468
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||  ||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||| || |||||||    
T  20799096 tacacttgtactttgtcaactcttcaaaaaggtacaagcacccagtgctttccaaatgaacgttggcacttcccttttgatcctttgctttcgtagacga 20799195  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata-----------------gcttct 182  Q
    | |||||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| |||||| |||||||| ||                 ||||||    
T  20799196 gattaacttcaagaaacagctc-tttgagatttcagattgaatctcctgatcaactgttgcttctggtgatgatgtagcttctgatgaaatcttgcttct 20799294  T
Q  183 gatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcag-tttt 280  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||| |||||| ||||| | |||||||||||| |||||||||||||||||||||| ||||    
T  20799295 gatgaactttacttctgatgatcttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttt 20799394  T
Q  281 cttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||                | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  20799395 cttcagatgcttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 20799468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 20883932 - 20883620
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| | | ||||| ||||||||||||| |||||||| ||| | ||||||||||||||||||||||||| ||    
T  20883932 tacacttgtactttgtcaactcttcaatgaggtaaaggcacttagtgcttttcaaacgaacgttgacactttccttttgatccttcgctctcttagatga 20883833  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctt------ 191  Q
    ||||||| | ||||  |||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||          
T  20883832 ggttaacataaagaatcagctcttttgaaatttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 20883733  T
Q  192 ----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
              || ||||||||||||||||||| ||||| |||||| |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||    
T  20883732 gatggacttctggttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagtttt 20883633  T
Q  281 cttcagatgcttt 293  Q
    |||||||||||||    
T  20883632 cttcagatgcttt 20883620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 23927090 - 23927431
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| | || |||  ||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||||    
T  23927090 tacacttgtactttgtcaactcttcaatgaggtaaaaacaccaagtgcttttcaaacgaacgttgacactttccttttgatccttcgctctcttagacga 23927189  T
Q  101 ggttaacttcaagagacagctc-ttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactt-tgcttc 197  Q
    ||||||| | | ||  |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  23927190 ggttaacataacgaatcagctctttttgagatttcagatttaatcttctgatcaactgtaacttctagtgatgatatagcttctgatgaacttctgcttc 23927289  T
Q  198 tgatgaacttctgcttttgatgcgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||||                |||||| |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||    |    
T  23927290 tgatga----------------cgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagatgctt----t 23927369  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||             |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  23927370 ta-----------aattcctttgctctctattgttcttccaagatctattgaaattgattaactttgcctatg 23927431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 675603 - 675915
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||  ||||||||||  || |||||  |||||||||||    
T  675603 tacacttgtactttgtcaactcttcaatgaaggacaagcaccgagtgcttttcaaatgaccgttgatacctccctttcaattcttcgtcctcttagacga 675702  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa----------- 188  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| ||||| |||||||||||||||| ||||||||||||||||||||||               
T  675703 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaatattctgttcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 675801  T
Q  189 ------ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
          ||||||||||||||| ||||||||| ||||| ||||||| ||||| ||||| | |  ||||||||||||||||||||||| ||||||||||| |    
T  675802 ggtggactttgcttctgatgatcttctgcttctgatgacgtcatttcttcagaggcacttgttacttcagaaacacttcatagctttagacgcagtttcc 675901  T
Q  282 ttcagatgctttag 295  Q
    ||||||||||||||    
T  675902 ttcagatgctttag 675915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 23064981 - 23065104
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||  || |||||||||||||||||    
T  23064981 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttccttttagtctttcgctctcttagacga 23065080  T
Q  101 ggttaacttcaagagacagctctt 124  Q
    |||||| | ||| |||||||||||    
T  23065081 ggttaaatccaatagacagctctt 23065104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 14388176 - 14387803
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || |||||||||| ||||||||||||||||| |||||  ||||||||||| || ||||| ||| |||||||    
T  14388176 tacacttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttgatacctcccttttaattcttcgttcttttagacg 14388077  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||||     || | ||||||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  14388076 aggttagaacgaaaa-acagctcctttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 14387978  T
Q  198 tgatgaacttctgcttttgatg------------------cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
    ||||| ||||||||||||||||                   ||||| |||| | ||||| |||  ||||||||| ||||| | |||||||||| ||||||    
T  14387977 tgatggacttctgcttttgatgaacttctgcttctgatgatgtcatcactttagaggcactagttacttcagaaccactttagagcttcagacacagttt 14387878  T
Q  280 tcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |                ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  14387877 tcttcagatgctttgg----------------gttcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 14387803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 19038039 - 19038162
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||||  || ||||||||||||||| |    
T  19038039 tacacttgtactttgtcaactcttcagtgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttccttttagtctttcgctctcttagacaa 19038138  T
Q  101 ggttaacttcaagagacagctctt 124  Q
    |||||| | ||| |||||||||||    
T  19038139 ggttaaatccaatagacagctctt 19038162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 41132665 - 41132446
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||| || |||||| ||| || |||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  41132665 tacacttgtactttgtcaactcttcaaagaaggacaaacacccaatgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacga 41132566  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||   | | | ||||||| ||||| | ||||| || ||| | ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  41132565 gattaa-aacgaaaaacagctcatttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 41132467  T
Q  199 gatgaacttctgcttttgatg 219  Q
    |||| |||||| ||| |||||    
T  41132466 gatggacttctacttctgatg 41132446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 44201049 - 44201167
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtta 105  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| ||  || |||||||||||||||||| |||    
T  44201049 ttgtactttgtcaactcttcaatgaaggacaagcactcagtgcttttcaaatgaacgttggcgccttcctctttgtctttcgctctcttagacgagttta 44201148  T
Q  106 acttcaagagacagctctt 124  Q
    | | ||| ||||| |||||    
T  44201149 aatccaatagacaactctt 44201167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 18311022 - 18310649
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || |||||||||| ||||||||||||||||| |||||  | || |||||  |||||||| ||| |||||||    
T  18311022 tacacttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttgatatcttcctttcaatccttcgttcttttagacg 18310923  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |    || | ||||||| ||||| | |||| ||| ||| | |||||||| ||||||||||| |||||||||||||||||||||| | |||||||    
T  18310922 aggttgaaacgaaaa-acagctcctttgaaacttcaaattaaatttactgatcaattgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 18310824  T
Q  198 tgatg-----------------aacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
    |||||                 ||||||||||| ||||| |||||| |||| | ||||| |||  ||||||||| ||||| | |||||||||||||||||    
T  18310823 tgatggacttctgtttctgatgaacttctgcttctgatgacgtcatcactttagaggcactagttacttcagaaccactttagagcttcagacgcagttt 18310724  T
Q  280 tcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||                 |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  18310723 tcttcagatgcttt----------------gggttcctttgctctctattgttcttccaagacctattgaaattgattaactttgtctatg 18310649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 26548034 - 26547929
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| || || || |||||||    
T  26548034 cttcagaggcagatttcttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctattaaatttgatcaactttg 26547935  T
Q  365 cctatg 370  Q
     |||||    
T  26547934 tctatg 26547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 5929735 - 5929858
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||| ||| ||  || || ||||||||||||||    
T  5929735 tacacttgtactttgtcaactcttcaataaaggacaagcacccagtgcttttcaaatgaacgttggcgccttcctctttgtcttttgctctcttagacga 5929834  T
Q  101 ggttaacttcaagagacagctctt 124  Q
    | |||| | ||| ||||| |||||    
T  5929835 gtttaaatccaatagacaactctt 5929858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 52350734 - 52350630
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacc-tcccttttgatccttcgctctcttagacg 99  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||  || |||||| ||||||| |    
T  52350734 tacaattgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaagtgaacgttggcaccttcccttttagtctttcgctttcttagatg 52350635  T
Q  100 aggtt 104  Q
    |||||    
T  52350634 aggtt 52350630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 28380027 - 28380180
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||| ||| || ||||||||||||| ||||||||||| |||||||||||| | || |||  || |||||| ||||||||||    
T  28380027 tacacttgtactttgtcaactct-caaagaaggacaagcactcaatgcttttcaaacgaacgttggcacattccctttagtctttcgctttcttagacga 28380125  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    |||| | | ||| ||||||||  ||||| | |||||||| ||||| ||||||||||    
T  28380126 ggttgaatccaatagacagct-gtttgaaacttcagattgaatctcctgatcaact 28380180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 22019638 - 22019743
Alignment:
Q  265 cttcagacgcagttttcttcagatgcttt-aggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  22019638 cttcagaggcagatttcttcagatgcttttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaacttt 22019736  T
Q  364 gcctatg 370  Q
    | |||||    
T  22019737 gtctatg 22019743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 22655789 - 22655886
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||| |||||||| |||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| || || || ||||||| |||||    
T  22655789 gcagatttcttcaaatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctattaaatttgatcaactttgtctatg 22655886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 11195117 - 11194806
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || ||  |||||| || ||||||||| ||||||| |||||  ||||||||||  || ||||| |||||||||||    
T  11195117 tacacttgtactttgtcaactctgataacgaaagacaagtacccagtgctttccaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 11195018  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctgtgatgatatagcttctgatgaa------ctt-- 191  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||| || ||||||||||||||||||||||||||||||      |||      
T  11195017 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatatactgatcaattgcagcttctgtgatgatatagcttctgatgaaatcttgcttct 11194919  T
Q  192 ----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
              |||||||||||||||||||||  ||||| ||||||||||||| || || | |  ||||||||| |||||| ||||||| |||||||||||    
T  11194918 gatggtattctgcttctgatgaacttctgctcctgatgacgtcattacttcagagacacttgttacttcagaagcacttcttagcttccgacgcagtttt 11194819  T
Q  281 cttcagatgcttt 293  Q
    |||||||||||||    
T  11194818 cttcagatgcttt 11194806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 22643199 - 22643304
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||| || | ||||||||||||||||||||| ||||||||  || |||||||||| |||||||||||||||||||||||| || || || |||||||    
T  22643199 cttcagaggccgatttcttcagatgctttaggtttctcttctttttgattcctttgctttcttttgttcttccaagacctattaaatttgatcaactttg 22643298  T
Q  365 cctatg 370  Q
     |||||    
T  22643299 tctatg 22643304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 22019374 - 22019523
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaac-gttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||| || |||||||||||||| || |||||||||||||||| || | ||||| || |||  || |||||| ||||||||||||||    
T  22019374 ttgtactttgtcaactct-cattgagggacaagcacccaatgcttttcaaatgaacagtagccaccttccctttagtctttcgctttcttagacgaggtt 22019472  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
     | ||||| ||||||||  ||||| | ||||| || ||||||||||||||||    
T  22019473 gaattcaatagacagct-atttgaaacttcaggttgaatcttctgatcaact 22019523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 23065236 - 23065319
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| || | ||||||||||||||| |||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  23065236 cttcagatgctgatttcttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 23065319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 28380296 - 28380379
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||| || |||||||||||||||||||||||| ||||||||||    
T  28380296 cttcagaggcagatttcttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttctaagacctatt 28380379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 316 - 370
Target Start/End: Complemental strand, 20883612 - 20883558
Alignment:
Q  316 ctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  20883612 ctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 20883558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 20867044 - 20866991
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcc 366  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  20867044 ttcctttgctctctattgttcttccaagacctattgaaattgattaactttgcc 20866991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 39193988 - 39193851
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||| | | ||| |  || ||||||    
T  39193988 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttaagatgcact-taagcttcag 39193890  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     | ||||||| |||||||||||||||||||||||||||||    
T  39193889 gagcacttca-agcttcagacgcagttttcttcagatgct 39193851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 12947066 - 12947185
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacg 273  Q
    ||||||||||| ||| |||||||||| ||||||||||| ||||| ||||||| |||||  |||| || |  ||||||||| |||||| | |||||||||     
T  12947066 gcttctgatgatcttctgcttctgataaacttctgcttctgatgacgtcatttcttcaggggcactttgttacttcagaagcacttcttggcttcagaca 12947165  T
Q  274 cagttttcttcagatgcttt 293  Q
    ||||||||||||||||||||    
T  12947166 cagttttcttcagatgcttt 12947185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 20251810 - 20251908
Alignment:
Q  5 cttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||| |||||||||||||| |||||| |||||||||| || || |||||||| |||||||||||||| || |||  || |||||| ||||||||||||||    
T  20251810 cttgcactttgtcaactct-caatgaaggacaagcacccaatgtttttcaaacgaacgttggcaccttccctttagtctttcgctttcttagacgaggtt 20251908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 52350483 - 52350393
Alignment:
Q  280 tcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||| |||||| ||||||  | || ||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||    
T  52350483 tcttcagatgcttctaggtttctcttcacgttgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgtctatg 52350393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 19038307 - 19038377
Alignment:
Q  278 tttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    |||||||| |||||| |||||| ||||||||| || |||||||||| ||||||||||||||||||||||||    
T  19038307 tttcttcatatgcttctaggtttctcttcttgttgattcctttgctttcttttgttcttccaagacctatt 19038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 19170241 - 19170145
Alignment:
Q  142 atcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca 238  Q
    |||||||||| |||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||| ||||| ||||| |||||| |||||| |||||    
T  19170241 atcttctgatgaactgtagcttctggtgat-ataaagcttctgatgaactt-gcttctgatgaacttttgcttctgatgacgtcatcacttcagaggca 19170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 20441211 - 20441073
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  20441211 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttcagaagcact-ctagcttcag 20441113  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||| ||||||||||||||||||||||    
T  20441112 aagcacttta-agcttcaaacgcagttttcttcagatgctt 20441073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 39587275 - 39587419
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaa 244  Q
    |||||| ||||||||||| |||| || | ||||||||||||  | ||||||||||||| |||||||||  |||| |||||| |||||| ||||| |  |     
T  39587275 gatcaattgtagcttctggtgataatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttccgatgacgtcatcacttcagaggcacttcag 39587374  T
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
     |||||||| |||||  |||||||||||||||||||||||||||||||    
T  39587375 -cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 39587419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 9050325 - 9050226
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||||||||| ||||| ||||||||||||| | ||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  9050325 tgcttctgatgagcttctgcttctgatgacgtcattacttcagaagcactccag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 9050229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 148108 - 147971
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  148108 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 148010  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  148009 aagcactt--tagcttcagacgcagttttcttcagatgctt 147971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 296
Target Start/End: Original strand, 17371265 - 17371382
Alignment:
Q  177 gcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||||||| ||||||||||||||| ||||| | ||| |||||| ||||||||| || || |   |||||| | ||||||||| |||||||| |    
T  17371265 gcttctgatgaactt-gcttctgatgaactt-tgcttctaatgacgtcatcacttcaaagacactttgt--cttcaggagcacttcataacttcagacac 17371360  T
Q  275 agttttcttcagatgctttagg 296  Q
    ||||||||||||||||||||||    
T  17371361 agttttcttcagatgctttagg 17371382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 675917 - 675974
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||| || |||||    
T  675917 ttcctttgctctctattgttcttccaagacctattgaaattgcttaactatgtctatg 675974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 19170119 - 19170054
Alignment:
Q  281 cttcagatgcttta-ggttactcttcttgatggttcctttgctctcttttgttcttccaagaccta 345  Q
    |||||||||||||| || | ||||| ||| || |||||||||||||||||||||||||||||||||    
T  19170119 cttcagatgctttaaggcttctctttttgttgattcctttgctctcttttgttcttccaagaccta 19170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12946872 - 12947091
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||| ||  |||||||||||||||||||| |||||  ||||||||||  || ||||| | |||||||||    
T  12946872 tacacttgtactttgtcaactctgataacgaaggataaatactcagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacg 12946971  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |    || | ||||||| |||||   ||||| || |||   ||| |||  || |||||||| |||||||||||||||||||||| |  ||||||    
T  12946972 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaattaactgttcacttgaagcttctggtgatgatatagcttctgatgaaatcgtgcttc 12947070  T
Q  198 tgatgaacttctgcttttgat 218  Q
    |||||| ||||||||| ||||    
T  12947071 tgatgatcttctgcttctgat 12947091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 26548299 - 26548184
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaac-gttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||||  | || |||||||||| || |||||||||||||||| | || ||||| ||||||  || |||||| ||||||||||||||    
T  26548299 ttgtactttgtcaactcttata-gaaggacaagcacccaatgcttttcaaatgaactgctgccaccttccttttagtctttcgctttcttagacgaggtt 26548201  T
Q  105 aacttcaagagacagct 121  Q
     | | ||| ||||||||    
T  26548200 gaatccaatagacagct 26548184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 22642933 - 22643082
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||| |  ||| |||||||||| || ||||||||||||||| ||||| |||||  | |||  || |||||| ||||||||||||||    
T  22642933 ttgtactttgtcaactct-ctttgaaggacaagcacccaatgcttttcaaatgaaccgttgccacctttcctttagtctttcgctttcttagacgaggtt 22643031  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
     | | ||| ||||| ||  ||||| | ||||| || ||||||||||||||||    
T  22643032 gaatccaatagacaact-atttgaaacttcaggttgaatcttctgatcaact 22643082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 25448314 - 25448243
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||||||||||| |||||| | | | ||| ||| || |||||||||||||| |||||||||||||||||    
T  25448314 gcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctctattgttcttccaagacct 25448243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 154183 - 154046
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  154183 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 154085  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  154084 aagcactt--tagcttcagacgcagttttcttcagatgctt 154046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 5974077 - 5974214
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  5974077 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 5974175  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  5974176 aagcactt--tagcttcagacgcagttttcttcagatgctt 5974214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 18381722 - 18381675
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttta 294  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  18381722 acttcagaagcactt--tagcttcagacgcagttttcttcagatgcttta 18381675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 21544202 - 21544263
Alignment:
Q  142 atcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatga 203  Q
    |||||||||| |||||||||||||| |||| | | ||||||||||||||||||||||||||||    
T  21544202 atcttctgatgaactgtagcttctggtgat-acacagcttctgatgaactttgcttctgatga 21544263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 21544289 - 21544339
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    |||||| | ||||||||| ||||||||||| ||||||||||||||||||||    
T  21544289 cttcaggagcacttcataacttcagacgcatttttcttcagatgctttagg 21544339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 47195614 - 47195728
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||| ||| ||||| ||||| ||| || |||||| ||||| |  |  |||||||| |||||  |||||||||||||    
T  47195614 gcttctgatgaccttctgcttctgatgagcttatgcttctgatgacgttatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgc 47195710  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  47195711 agttttcttcagatgctt 47195728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 9050222 - 9050173
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  9050222 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 9050173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 21165289 - 21165338
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  21165289 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 21165338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 21165240 - 21165285
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||||    
T  21165240 cttcagaagcactt--tagcttcagacgcagttttcttcagatgcttt 21165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 24252972 - 24253012
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  24252972 ttcctttgctctccattgttcttccaagacctattgaaatt 24253012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 39193845 - 39193805
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  39193845 ttcctttgctttcctttgttcttccaagacctattgaaatt 39193805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 39587424 - 39587464
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  39587424 ttcctttgctctccattgttcttccaagacctattgaaatt 39587464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 47195733 - 47195773
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  47195733 ttcctttgctctccattgttcttccaagacctattgaaatt 47195773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 2327189 - 2327118
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||||||||||| |||||| | | | ||| ||| || |||||||||||| | |||||||||||||||||    
T  2327189 gcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacct 2327118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 11194802 - 11194752
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||||||||   |||||||||||||||||||||||||| | |||||||    
T  11194802 ttcctttgctcttcattgttcttccaagacctattgaaattgaataacttt 11194752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 23580220 - 23580140
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  23580220 gtagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 23580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 35013235 - 35013315
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  35013235 gtagcttctggtgaagatattgcttctgatgaaaaactttgcttctgatgaccttctgcttctgatgacgtcatcacttca 35013315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 47195567 - 47195640
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  47195567 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 47195640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 4250459 - 4250379
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  4250459 tgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttca 4250379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 17957706 - 17957755
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||| ||  |||||||||||||||||||||||||| ||| ||||    
T  17957706 ttcctttgctttccattgttcttccaagacctattgaaattgattgactt 17957755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 18381954 - 18381849
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||| ||| | |||||||  ||||  ||||||||||  || ||||| || ||||||||    
T  18381954 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagggctctccaaatgactgttgatacctccctttcaattcttcgttcttcttagac 18381855  T
Q  99 gaggtt 104  Q
    ||||||    
T  18381854 gaggtt 18381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 20441068 - 20441031
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaa 350  Q
    |||||||||||||  |||||||||||||||||||||||    
T  20441068 ttcctttgctctccattgttcttccaagacctattgaa 20441031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 24252938 - 24252967
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  24252938 agcttcagacgcagttttcttcagatgctt 24252967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 26577024 - 26577068
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||    
T  26577024 cttcaggagcacttca-agcttcagacgcagttttcttcagatgct 26577068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 37642433 - 37642489
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatga 203  Q
    ||||| ||||| |||||||| |||| ||||||||||||||||||||||||||| ||||    
T  37642433 ctgatgaactgcagcttctggtgat-atatagcttctgatgaactttgcttctaatga 37642489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Original strand, 37642533 - 37642562
Alignment:
Q  265 cttcagacgcagttttcttcagatgcttta 294  Q
    ||||||||||||||||||||||||||||||    
T  37642533 cttcagacgcagttttcttcagatgcttta 37642562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 44201299 - 44201363
Alignment:
Q  281 cttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    |||||||||||| |||||| ||||| |||||   || ||| |||||||||||||||||||||||||||    
T  44201299 cttcagatgcttctaggtttctcttgttgat---tcatttcctctcttttgttcttccaagacctatt 44201363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 4250384 - 4250339
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| |||||||  |||||||| ||||||||||||||||||||    
T  4250384 acttcagaagcacttca--gcttcagatgcagttttcttcagatgctt 4250339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 5929990 - 5930046
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttg 320  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||| || ||||||||    
T  5929990 cttcagatgcagatttcttcagatgcttctaggtttctcttcttgttgattcctttg 5930046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 18381671 - 18381631
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||| ||||  ||||||||||||||||||||||||||    
T  18381671 ttcctttggtctccattgttcttccaagacctattgaaatt 18381631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 231; Significance: 1e-127; HSPs: 2)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 367
Target Start/End: Original strand, 2030 - 2414
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2030 tacatttgtactttgtcaactcttcaatgaaggacaggcacccagtgcttttcaaatgaacgttggcacctcccttttgatccttcgttctcttagacga 2129  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg-aactttgcttct 198  Q
    | ||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  2130 gattaacttcaggagacaactcttttgagatttcagattgaatattctgatcaactgtagcttctggtgatgatatagcttctgatgaaattttgcttct 2229  T
Q  199 gatga---------------acttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttct 282  Q
    |||||               |||||||||| |||||  |||||||||||| | ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  2230 gatgaactttgcttctgatgacttctgcttctgatgatgtcattacttcagaagcacttaaaacttcagaaacacttcatagcttcagacgcagttttct 2329  T
Q  283 tcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcct 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  2330 tcagatgctttaggttactcttcttgatggttcctttgctctcttttattcttccaagacctattgaaattgattaactttgcct 2414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1415 - 1455
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcac 41  Q
    |||| ||||||||||||||||||||||||| ||||| ||||    
T  1415 tacatttgtactttgtcaactcttcaatgaaggacaggcac 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 226; Significance: 1e-124; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 856 - 1190
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  856 tacacttgtactttgtcaactcttcaatgaaggacaagcacacagtgcttttcaaatgaacgttgacacctcccttttgatccttcgctctcttagacga 955  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctg 199  Q
    |||||| |||||||||||||||||||||  || |||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  956 ggttaaattcaagagacagctcttttgaatttccagattgaatgttctgatcaactgtagtttctggtgatgatatagcttctgatgaactttgcttctg 1055  T
Q  200 atgaacttctgcttttgatgcgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggtta 299  Q
    ||||                | ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1056 atga----------------cttcattacttcagaggcacttgacacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttc 1139  T
Q  300 ctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1140 ctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 1190  T

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Target: scaffold0090; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 5236 - 5570
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5236 tacacttgtactttgtcaactcttcaatgaaggacaagcacacagtgcttttcaaatgaacgttgacacctcccttttgatccttcgctctcttagacga 5335  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctg 199  Q
    |||||| |||||||||||||||||||||  || |||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  5336 ggttaaattcaagagacagctcttttgaatttccagattgaatgttctgatcaactgtagtttctggtgatgatatagcttctgatgaactttgcttctg 5435  T
Q  200 atgaacttctgcttttgatgcgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggtta 299  Q
    ||||                | ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  5436 atga----------------cttcattacttcagaggcacttgacacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttc 5519  T
Q  300 ctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5520 ctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 5570  T

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Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 19313042 - 19312675
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||    
T  19313042 tacacttgtactttgtcaactcttcaatgaaggacaagcacacagtgcttttcaaatgaacgttgaaacatcccttttgatccttcgctctcttagacga 19312943  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg-aactttgcttct 198  Q
    |||||| ||||||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||    
T  19312942 ggttaaattcaagagacagctcttttgaaattccagattgaatcttctgattaactgtagcttctggtgatgatatagcttctgatgaaattttgcttct 19312843  T
Q  199 gatga---------------acttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttct 282  Q
    |||||               |||||||||| |||||  |||||||||||| ||||| | || ||||||||||||||||||||||| ||||||||||||||    
T  19312842 gatgaactttgcttatgatgacttctgcttctgatgatgtcattacttcagaggcacttgacacttcagaaacacttcatagcttaagacgcagttttct 19312743  T
Q  283 tcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 350  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19312742 tcagatgctttaggttcctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 19312675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 19356523 - 19356880
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctttt-caaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  19356523 tacacttgtactttgccaactcttcaatgagggacaagcacccagtgctttttcaaatgaacgttggcacttcccttttgatccttcgctctcttagacg 19356622  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttc 197  Q
    |||||||||| |||| ||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  19356623 aggttaacttaaagaaacagctcttttgagattccaaattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 19356722  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |   ||||||| |||||||||||||||||||||||||||||||||| || |||||      
T  19356723 tgatgaacttctgcttctgatgacgtcattacttcaaaggcacttataacttcaaaaacacttcatagcttcagacgcagttttcttcatatacttta-- 19356820  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                  |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  19356821 --------------ggttcctttgctctctattgttcttccaagacctattgaaattgattaactttgtctatg 19356880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 19498016 - 19497660
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttga-tccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||    
T  19498016 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctccctttttagtccttcgttttcttagacg 19497917  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
     | ||||    || | ||||||| ||||| | ||||| || ||| | |||||||||| ||||||||| |||||||||||||||||||||| | |||||||    
T  19497916 ggattaaaacgaaaa-acagctcctttgaaacttcagtttaaatatactgatcaactatagcttctggtgatgatatagcttctgatgaaatcttgcttc 19497818  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    ||||| |||||||||| ||||| ||||||||||||| ||||| | |  |||||| || ||||||||||||||||||||||||||||||||||||||||      
T  19497817 tgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcaaaagcacttcatagcttcagacgcagttttcttcagatgcttta-- 19497720  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                  | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  19497719 --------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 19497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 20646632 - 20646233
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  20646632 tacacttgtactttgtcaactcttcaacaagg-acaagcacccagtgcttttcaaattaacgttggcacctcccttttagtccttcgctctcttagacga 20646534  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata---------------gcttctga 184  Q
    |||||| | ||| ||||| ||||||||| | | ||| || ||||||||||||||||||||||||| |||||||||||               ||||||||    
T  20646533 ggttaaatccaaaagacaactcttttgaaactccaggttgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagttgcttctga 20646434  T
Q  185 tgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttc--------------- 268  Q
    |||||||||||||||||| | || ||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||||| | ||||                   
T  20646433 tgaactttgcttctgatg-agttttgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcaggcgcagttttctt 20646335  T
Q  269 -agacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcct 367  Q
     |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||    
T  20646334 cagacgcagttttcttcagatgctttaggttcctcttattgatggttcctttgctctcttttgttcttccaagacctattg-aattgatcaactttgcct 20646236  T

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Target: chr2; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 141 - 350
Target Start/End: Complemental strand, 19297523 - 19297314
Alignment:
Q  141 aatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca 238  Q
    |||||||||||||||||||||||||| |||  || | ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| |||||    
T  19297523 aatcttctgatcaactgtagcttctgatgaa-attttgcttctgatgaactttgcttctgatga-cttctgcttctgatgacgtcattacttcagaggca 19297426  T
Q  239 ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttcca 338  Q
     | || ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19297425 cttgacacttcagaaacacttcatagcttcagacgcagtttccttcagatgctttaggttcctcttcttgatggttcctttgctctcttttgttcttcca 19297326  T
Q  339 agacctattgaa 350  Q
    ||||||||||||    
T  19297325 agacctattgaa 19297314  T

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Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 19300035 - 19299890
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19300035 tacacttgtactttgtcaactcttcaatgaaggacaaacacccagtgcttttcaaatgaacgttgacacctcccttttgatccttcgctctcttagacga 19299936  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatctt 146  Q
    |||||| ||||||||||| ||||||||| ||| |||||| ||||||    
T  19299935 ggttaaattcaagagacaactcttttgaaattccagattgaatctt 19299890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 24275229 - 24275600
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  24275229 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacga 24275328  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  24275329 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaat-tactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 24275426  T
Q  199 gatgaacttctgcttttgatg------------------cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
    |||| |||||||||| |||||                  |||||| |||||| ||||| | |||||||||||| |||||||||||||||||||| |||||    
T  24275427 gatggacttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgctgtttt 24275526  T
Q  281 cttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||                | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  24275527 cttcagatgcttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 24275600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 17969234 - 17968860
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||| ||||||    
T  17969234 tacacttgtactttgtcaactcttcaatgaaggacgagcacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttctcagacga 17969135  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaa--tcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--------- 188  Q
    || |||    || | ||||||| ||||| | ||||| | |||  | || ||||||||||||||||||| |||||| | |||||||||||||             
T  17969134 ggataaaacgaaaaaacagctcctttgaaacttcagttataaaatattttgatcaactgtagcttctggtgatgacacagcttctgatgaaatcttgctt 17969035  T
Q  189 --------ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
            ||||||||||||||| ||||||||| ||||| |||||| |||||| ||||| | |||||||||||| |||||||||||||||||||||||||    
T  17969034 ctgatggactttgcttctgatgatcttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttt 17968935  T
Q  280 tcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||                | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17968934 tcttcagatgcttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 17968860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 967528 - 967215
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  967528 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacga 967429  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctt------ 191  Q
    | ||||   | | | ||||||| ||||| | ||||| || ||| | ||||||||||||||||||| |||||||||||||||||||||||  |||          
T  967428 gattaa-aacgaaaaacagctcctttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 967330  T
Q  192 ----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
              ||||||||||| |||||||||| ||||| ||||||||||||| ||||| | | |||||||||| ||||||||||||||||||||||||||    
T  967329 gatggatttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaagcacttcatagcttcagacgcagtttt 967230  T
Q  281 cttcagatgctttag 295  Q
    ||| ||||| |||||    
T  967229 ctttagatgttttag 967215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 177 - 370
Target Start/End: Original strand, 22755681 - 22755872
Alignment:
Q  177 gcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgca 275  Q
    ||||||||||||||||||||||||||   |||||||| ||||| ||||||||||||| ||||||| |||||||||||| ||||||| | ||||||||| |    
T  22755681 gcttctgatgaactttgcttctgatggg-ttctgcttctgatgacgtcattacttcagaggcatt-gaaacttcagaagcacttcaaaacttcagacgta 22755778  T
Q  276 gttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||||||||||  ||||||||||| || |||||||||| ||||||||||||||||||||| ||||| || ||||||| |||||    
T  22755779 gttttcttcagatgctttaggttcttcttcttgatgatttctttgctctcgtttgttcttccaagacctatt-aaattgatcaactttgtctatg 22755872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 21025552 - 21025429
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||  || |||||| ||||||||||    
T  21025552 tacacttgtactttgtcaactcttcaatgaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttttagtctttcgctttcttagacga 21025453  T
Q  101 ggttaacttcaagagacagctctt 124  Q
    |||| | | ||| |||||||||||    
T  21025452 ggttgaatccaatagacagctctt 21025429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 36784830 - 36784535
Alignment:
Q  1 tacacttgtactttgtcaactcttcaat-gagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   |  || ||||||| |  || |||||| ||||||| |||||  ||||||||||  || ||||| ||||||||| |    
T  36784830 tacacttgtactttgtcaactctgatagcgaaggacaagtatccaatgctttccaaatgaccgttgatacctccctttcaattcttcgttctcttagatg 36784731  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactt-tgcttc 197  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||| || |||||||| ||||||||||||||||||||  ||| ||||||    
T  36784730 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcaattgcagcttctggtgatgatatagcttctgatggtcttctgcttc 36784632  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||| |||||||||| ||||| ||||||||||||| || || | |  ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  36784631 tgatggacttctgcttctgatgacgtcattacttcagagacacttggtacttcagaagcacttcttagcttcagacgcagttttcttcagatgcttt 36784535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22774562 - 22774783
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctt-ttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||  ||||||||||| || ||||| |||||||||||    
T  22774562 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttcttcaaatgaccgttgatacctcccttttaattcttcgttctcttagacg 22774661  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagattt--aatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgct 195  Q
    ||||| |   | | | ||||||| ||||| | |||| ||||  |||   |||||||| |||||||||| |||||||||||||||||||  || | |||||    
T  22774662 aggttga-aacgaaaaacagctcctttgaaacttca-atttaaaataaactgatcaaatgtagcttctggtgatgatatagcttctgacaaaatattgct 22774759  T
Q  196 tctgatgaacttctgcttttgatg 219  Q
    ||||||| |||||||||| |||||    
T  22774760 tctgatggacttctgcttctgatg 22774783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22779940 - 22780161
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctt-ttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||  ||||||||||| || ||||| |||||||||||    
T  22779940 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttcttcaaatgaccgttgatacctcccttttaattcttcgttctcttagacg 22780039  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagattt--aatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgct 195  Q
    ||||| |   | | | ||||||| ||||| | |||| ||||  |||   |||||||| |||||||||| |||||||||||||||||||  || | |||||    
T  22780040 aggttga-aacgaaaaacagctcctttgaaacttca-atttaaaataaactgatcaaatgtagcttctggtgatgatatagcttctgacaaaatattgct 22780137  T
Q  196 tctgatgaacttctgcttttgatg 219  Q
    ||||||| |||||||||| |||||    
T  22780138 tctgatggacttctgcttctgatg 22780161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22763858 - 22764079
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctt-ttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||| |||||  ||||||||||| || ||||| |||||||||||    
T  22763858 tacacttgtactttatcaactcttcaatgaaggacaagcacccagtgcttcttcaaatgaccgttgatacctcccttttaattcttcgttctcttagacg 22763957  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatt-taatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgctt 196  Q
    ||||| |   | | | ||||||| ||||| | ||||| ||  |||   |||||||| |||||||||| |||||||||||||||||||  || | ||||||    
T  22763958 aggttga-aacgaaaaacagctcctttgaaacttcagtttaaaataaactgatcaaatgtagcttctggtgatgatatagcttctgaaaaaatattgctt 22764056  T
Q  197 ctgatgaacttctgcttttgatg 219  Q
    |||||| |||||||||| |||||    
T  22764057 ctgatggacttctgcttctgatg 22764079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 24814374 - 24814270
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||||||||||||| || || || |||||||    
T  24814374 cttcagaagcagatttcttcagatgctttaggtttctctt-ttgttgattcctttgctctcttttgttcttccaagacctattaaatttgatcaactttg 24814276  T
Q  365 cctatg 370  Q
     |||||    
T  24814275 tctatg 24814270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 1084347 - 1084426
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||| ||| |||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||    
T  1084347 cttcagaggcaattttcttcagatgctttaggcttctcttcttgctgattcctttgctctcttttgttcttccaagacct 1084426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 24793799 - 24793718
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||||||||||||    
T  24793799 cttcagaggcagatttcttcagatgctttaggtttctctt-ttgttgattcctttgctctcttttgttcttccaagacctatt 24793718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 24415048 - 24414755
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||| | | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  24415048 tacacttgtactttgtcaactttgttaacgaaggacaaatactcagtgctatccaaatgatcgttgatacctccctttcaattcttcgttcttcttagac 24414949  T
Q  99 gaggttaacttcaagagacagctcttttgagat-ttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatg--aactttgc 194  Q
    |||||| |  |  ||| ||||||  |||| ||| ||||| || ||| | |  ||||| |||||||||| |||||||| | ||||||||||  ||| ||||    
T  24414948 gaggttgaaat-gagaaacagctactttg-gatcttcagtttgaatttacaaatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgc 24414851  T
Q  195 ttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| ||||||||| ||||| |||||| |||||| ||||| |   | |||||||| |||||  |||||||||||||||||||||||||||||||    
T  24414850 ttctgatgagcttctgcttctgatgacgtcatcacttcagaggcact-tcagcttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 24414755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 18768776 - 18768638
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  18768776 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 18768678  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  18768677 aagcacttta-agcttcagacgcagttttcttcagatgctt 18768638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 6081677 - 6081734
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  6081677 ttcctttgctctccattgttcttccaagacctattgaaattgattgactttgcctatg 6081734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 22764179 - 22764232
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  22764179 tttgctctctattgttcttccaagacctattgaaattgaataactttgcctatg 22764232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26867274 - 26867379
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||||| ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  26867274 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctttcaatgcttcgttcttcttagac 26867373  T
Q  99 gaggtt 104  Q
    ||||||    
T  26867374 gaggtt 26867379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 28721186 - 28721048
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||| || | ||| |   | ||||||    
T  28721186 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcactccagatgcact-tcagcttcag 28721088  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  28721087 aagcacttta-agcttcagacgcagttttcttcagatgctt 28721048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 28731774 - 28731636
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||| || | ||| |   | ||||||    
T  28731774 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcactccagatgcact-tcagcttcag 28731676  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  28731675 aagcacttta-agcttcagacgcagttttcttcagatgctt 28731636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 6081625 - 6081673
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  6081625 acttcagaagcacttcttagcttcagacgcagttttcttcagatgcttt 6081673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 21025274 - 21025199
Alignment:
Q  273 gcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    |||| |||||||| |||||| ||||||  |||||||| || |||||||||||||||||||| ||||||||||||||    
T  21025274 gcagatttcttcatatgcttctaggtttatcttcttgttgattcctttgctctcttttgttgttccaagacctatt 21025199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 24425381 - 24425267
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||| ||||| ||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||    
T  24425381 gcttctgatgagcttctgcttctgatgagcttctacttctgatgacgtcatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgc 24425285  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  24425284 agttttcttcagatgctt 24425267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 26867471 - 26867585
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  |||||||| |||||  |||||||||||||    
T  26867471 gcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcactccag-cttcagaagcactt--tagcttcagacgc 26867567  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  26867568 agttttcttcagatgctt 26867585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 967213 - 967156
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||| |||  ||||||||||||||||||||||||| ||||||| ||||||||    
T  967213 ttcctttgctttctactgttcttccaagacctattgaaattgattaactatgcctatg 967156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 21172296 - 21172181
Alignment:
Q  177 gcttctgatgaacttt-gcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||| | |||| |||||| | ||| |  |  |||||||| ||||| | ||||||||||||    
T  21172296 gcttctgatgaccttttgcttctgatgaacttctgcttctgatgacatcatcacttcagatgcacttcag-cttcagaagcacttta-agcttcagacgc 21172199  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  21172198 agttttcttcagatgctt 21172181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 370
Target Start/End: Complemental strand, 23392473 - 23392384
Alignment:
Q  281 cttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||| |||||| | ||| | ||| || ||| ||||||||||||||||||||||||||||||| | ||| || ||||||| |||||    
T  23392473 cttcagatgatttaggcttctccttttgttgattcttttgctctcttttgttcttccaagacctattaagattgatcaactttgtctatg 23392384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26879863 - 26879968
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||| | | ||||| ||| ||| |||||||||| ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  26879863 tacacttgtactttgtcaactttgttaatgaaggataagtactcagtgctcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 26879962  T
Q  99 gaggtt 104  Q
    ||||||    
T  26879963 gaggtt 26879968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 27978408 - 27978303
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    |||||||||||||||||||||||   || || ||||||| |||||||||| ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  27978408 tacacttgtactttgtcaactctgataacgaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 27978309  T
Q  99 gaggtt 104  Q
    ||||||    
T  27978308 gaggtt 27978303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28064937 - 28064832
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    |||||||||||||||||||||||   || || ||||||| |||||||||| ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  28064937 tacacttgtactttgtcaactctgataacgaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 28064838  T
Q  99 gaggtt 104  Q
    ||||||    
T  28064837 gaggtt 28064832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 36784531 - 36784474
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| | | ||||||||||||    
T  36784531 ttcctttgctctccattgttcttccaagacctattgaaattgaatgactttgcctatg 36784474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 353
Target Start/End: Complemental strand, 24414898 - 24414710
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaa 245  Q
    ||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| ||||| |  |      
T  24414898 atcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcag- 24414800  T
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagaccta 345  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||               ||   |||||||||||||  ||||||||||||||||||    
T  24414799 cttcagaagcactt--tagcttcagacgcagttttcttcagatgcttc--------------gaa--ttcctttgctctccattgttcttccaagaccta 24414718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 20417491 - 20417377
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||| ||||||||  ||||| |||||| |||||| ||||| |  |  |||||||| || ||  |||||||||||||    
T  20417491 gcttctgatgaccttctgcttctgatgagcttctgctcctgatgacgtcatcacttcagaggcacttcag-cttcagaagcattt--tagcttcagacgc 20417395  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  20417394 agttttcttcagatgctt 20417377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 370
Target Start/End: Original strand, 22774752 - 22774936
Alignment:
Q  172 atatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatgc-gtcattacttcaaaggcattagaaacttcagaaacacttcatagcttca 269  Q
    |||| |||||||||| |||| |||||||||||||||||||||| |||||  |||||  ||||| ||| | | |  | ||||||| |||||  ||||||||    
T  22774752 atattgcttctgatggacttctgcttctgatgaacttctgcttctgatgatgtcatcgcttcagaggtacttgttagttcagaagcacttt-tagcttca 22774850  T
Q  270 gacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctat 369  Q
    ||||| |||||||||||||||||||| || ||               |||||||||| |||||||||||||||||||| ||||| | ||||||| |||||    
T  22774851 gacgctgttttcttcagatgctttagcttcct---------------tttgctctctattgttcttccaagacctatttaaattgaataactttacctat 22774935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 370
Target Start/End: Original strand, 22780130 - 22780314
Alignment:
Q  172 atatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatgc-gtcattacttcaaaggcattagaaacttcagaaacacttcatagcttca 269  Q
    |||| |||||||||| |||| |||||||||||||||||||||| |||||  |||||  ||||| ||| | | |  | ||||||| |||||  ||||||||    
T  22780130 atattgcttctgatggacttctgcttctgatgaacttctgcttctgatgatgtcatcgcttcagaggtacttgttagttcagaagcacttt-tagcttca 22780228  T
Q  270 gacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctat 369  Q
    ||||| |||||||||||||||||||| || ||               |||||||||| |||||||||||||||||||| ||||| | ||||||| |||||    
T  22780229 gacgctgttttcttcagatgctttagcttcct---------------tttgctctctattgttcttccaagacctatttaaattgaataactttacctat 22780313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 20417372 - 20417323
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  20417372 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 20417323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 27978111 - 27978062
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  27978111 ttcctttgctctccattgttcttccaagacctattgaaattgattgactt 27978062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 28064640 - 28064591
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  28064640 ttcctttgctctccattgttcttccaagacctattgaaattgattgactt 28064591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 38585814 - 38585765
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  38585814 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 38585765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 24425262 - 24425222
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  24425262 ttcctttgctctccattgttcttccaagacctattgaaatt 24425222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 26867590 - 26867630
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  26867590 ttcctttgctctccgttgttcttccaagacctattgaaatt 26867630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 26880179 - 26880219
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  26880179 ttcctttgctctccattgttcttccaagacctattgaaatt 26880219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 28701018 - 28700947
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||||||||||| |||||| | | | ||| ||| || |||||||||||| | |||||||||||||||||    
T  28701018 gcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacct 28700947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 16777213 - 16777293
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  16777213 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 16777293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 23392588 - 23392533
Alignment:
Q  147 ctgatcaactgtagcttctgtgatgatatagcttctgatgaactttgcttctgatgaa 204  Q
    ||||| ||||||||||||||  ||||  | ||||||||||||||||||||||||||||    
T  23392588 ctgatgaactgtagcttctg--atgaacttgcttctgatgaactttgcttctgatgaa 23392533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 26880144 - 26880174
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  26880144 tagcttcagacgcagttttcttcagatgctt 26880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 28374259 - 28374229
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  28374259 tagcttcagacgcagttttcttcagatgctt 28374229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 28379598 - 28379568
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  28379598 tagcttcagacgcagttttcttcagatgctt 28379568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 34790086 - 34790006
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  34790086 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 34790006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 34804229 - 34804149
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  34804229 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 34804149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 6081589 - 6081630
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  6081589 tgcttctgatgaacttctgcttctgatgacgtcattacttca 6081630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18768932 - 18768855
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  18768932 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 18768855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21172492 - 21172415
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  21172492 tacacttgtactttgtcaactctattaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 21172415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 24425427 - 24425355
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  24425427 atcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatg 24425355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24425577 - 24425500
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  24425577 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 24425500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 27978252 - 27978187
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatg-aactttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||||| |||||||||| ||| ||||||||||||  ||||||||| |||||    
T  27978252 tgtagcttctggtgatgatatcgcttctgatgaaaccttgcttctgatggtcttctgcttctgatg 27978187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 28064781 - 28064716
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatg-aactttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||||| |||||||||| ||| ||||||||||||  ||||||||| |||||    
T  28064781 tgtagcttctggtgatgatatcgcttctgatgaaaccttgcttctgatggtcttctgcttctgatg 28064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 28374225 - 28374184
Alignment:
Q  312 gttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||   ||||||||||||||||||||||||||    
T  28374225 gttcctttgctcttcattgttcttccaagacctattgaaatt 28374184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28374540 - 28374435
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||||| | ||| ||| |||||  |||| |||||  || ||||| || ||||||||    
T  28374540 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgctctccaactgaccgttgataccttcctttcaattcttcgttcttcttagac 28374441  T
Q  99 gaggtt 104  Q
    ||||||    
T  28374440 gaggtt 28374435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 28379564 - 28379523
Alignment:
Q  312 gttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||   ||||||||||||||||||||||||||    
T  28379564 gttcctttgctcttcattgttcttccaagacctattgaaatt 28379523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28731930 - 28731853
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  28731930 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 28731853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 18768633 - 18768593
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  18768633 ttcctttgctttccattgttcttccaagacctattgaaatt 18768593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 30795259 - 30795299
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  30795259 ttcctttgctttccattgttcttccaagacctattgaaatt 30795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 38585864 - 38585819
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| |||||  |||||||||||||| ||||||||||||||||    
T  38585864 acttcagaagcactt--tagcttcagacgcaattttcttcagatgctt 38585819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 928 - 1284
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgctttt-caaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||||||| |||||||| |||| |||||| |||||||||    
T  928 tacacttgtactttgtcaactcttcaataaaggacaagcacccagtgctttttcaaatgaacgttggcaactccctttcgatctttcgctttcttagacg 1027  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  1028 aggttaacttcaagagacaactcttttgagatttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 1127  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    ||||| |||||||||| ||||| ||||||| ||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||      
T  1128 tgatg-acttctgcttctgatgacgtcatttcttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta-- 1224  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1225 --------------ggttcctgtgctctcttttgttcttccaagacctattgaaattgattaactttgcctatg 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 5 - 350
Target Start/End: Original strand, 19461192 - 19461554
Alignment:
Q  5 cttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19461192 cttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttttaatccttcgctctcttagacgaggtt 19461291  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata---------------gcttctgatgaa 188  Q
    || ||||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||| |||||||||||               ||||||||||||    
T  19461292 aaattcaaaagacagctcttttgaaacttcaggttgaatcttctgatcaactgtagcttctggtgatgatatagcttctaatgaagttgcttctgatgaa 19461391  T
Q  189 ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcaga 287  Q
    |||||||||||||||  ||  |||| |||||  |||||||||||| ||||| | |||||||||||| ||||||| | |||||||||||||||||||||||    
T  19461392 ctttgcttctgatgagttttggcttctgatgatgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 19461491  T
Q  288 tgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 350  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19461492 tgctttaggttcctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 19461554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 5 - 350
Target Start/End: Original strand, 19558870 - 19559232
Alignment:
Q  5 cttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19558870 cttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcacctcccttttaatccttcgctctcttagacgaggtt 19558969  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata---------------gcttctgatgaa 188  Q
    || ||||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||| |||||||||||               ||||||||||||    
T  19558970 aaattcaaaagacagctcttttgaaacttcaggttgaatcttctgatcaactgtagcttctggtgatgatatagcttctaatgaagttgcttctgatgaa 19559069  T
Q  189 ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcaga 287  Q
    |||||||||||||||  ||  |||| |||||  |||||||||||| ||||| | |||||||||||| ||||||| | |||||||||||||||||||||||    
T  19559070 ctttgcttctgatgagttttggcttctgatgatgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcaga 19559169  T
Q  288 tgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 350  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19559170 tgctttaggttcctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaa 19559232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 22211429 - 22211073
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||| |    
T  22211429 tacacttgtactttgtcaactcttcaatgaggtacaagcacccagtgtttttcaaatgaacgttgacacttccattttgatccttcgctctcttagacaa 22211330  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||| | ||||  ||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| | ||||||||    
T  22211329 gtttaacataaagaaccagctcttttgagatttcagattgaatcttctgatccactgtagcttctggtgatgatatagcttctgatgaattcttgcttct 22211230  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||||||||| ||| ||||| |||||| | |||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  22211229 gatgaacttctacttctgatgacgtcatcatttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 22211133  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||    
T  22211132 -------------gattcctttgctctctattgttcttccaagacctattgaaattgaataactttgtctatg 22211073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 22135899 - 22135603
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||| || |||| |||||||| ||||||||||||||||||| ||||||| | ||||||||||||| ||| || |||||||    
T  22135899 tacacttgtactttgtcaactcttgaacgaggtacaagcacccagtgcttttcaaatgaactttggcactttccttttgatcctttgctttcgtagacga 22135800  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||    
T  22135799 gattaacttcaagagacagctc-tttgagatttcagattgaatcttctgatcaactgtaacttctggtgatgatatagcttctgatgaaatcttgcttct 22135701  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc-ttcagatgcttta 294  Q
    ||||||||||||||| ||||| |||||| |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  22135700 gatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcattcagatgcttta 22135603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 22167064 - 22166752
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || | ||||||||||||| ||| || |||||||    
T  22167064 tacacttgtactttgtcaactcttcaatgaggtacaagcacccagtgcttttcaaatgaacgttggaactttccttttgatcctttgctttcgtagacga 22166965  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctg---------------- 183  Q
    | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||                    
T  22166964 gattaacttcaagagacagctc-tttgagatttcagattgaatcttctgatcaactgtaacttctggtgatgatatagcttctgatgaaatcttgcttct 22166866  T
Q  184 -atgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
     |||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||| | |||||||||||| |||||||||||||||||||||||||||    
T  22166865 tatgaactttgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttc 22166766  T
Q  282 -ttcagatgcttta 294  Q
     |||||||||||||    
T  22166765 attcagatgcttta 22166752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 3843762 - 3844117
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  3843762 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacga 3843861  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  3843862 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 3843960  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  3843961 gatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 3844057  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||    
T  3844058 -------------gattcctttgctctctattgttcttccaagacctattgaaattgcttaactatgcctatg 3844117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 20259658 - 20259303
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  20259658 tacacttgtactttttcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacga 20259559  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| | || ||||||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  20259558 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaatttactaatcaactgtagcttctggtgatgatataacttctgatgaaatcttgcttct 20259460  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  20259459 gatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 20259363  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  20259362 -------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 20259303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 21046288 - 21045933
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  21046288 tacacttgtactttttcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacga 21046189  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| | || ||||||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  21046188 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaatttactaatcaactgtagcttctggtgatgatataacttctgatgaaatcttgcttct 21046090  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  21046089 gatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 21045993  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  21045992 -------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 21045933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 7018422 - 7018085
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||     
T  7018422 tacacttgtactttgtcaactcttcaatgaaggacaaacacccagtgcttttcaaatgaacgttggcacctccctctttctctttcgctctcttagacgg 7018323  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctg 199  Q
    | |||| | || |||||| ||| || |||  ||||| || |||||||||||||||||||| |||| ||||||||||||||||||||||  | ||||||||    
T  7018322 gtttaaatccaggagacaactc-ttagagtcttcaggttgaatcttctgatcaactgtagattctggtgatgatatagcttctgatgacttctgcttctg 7018224  T
Q  200 atgaacttctgcttttgatgcgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggtta 299  Q
    ||||                ||||||||||||| ||||| | || |||||||||| |||||||||||||||||||||||||||||||||||||||         
T  7018223 atga----------------cgtcattacttcagaggcacttgagacttcagaaaaacttcatagcttcagacgcagttttcttcagatgcttta----- 7018145  T
Q  300 ctcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
               | ||| |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  7018144 -----------gattcttttgctttctattgttcttccaagacctattgaaattgattaactttgcctatg 7018085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 23370788 - 23371159
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||| |||||| ||||||||||| || ||||| | ||| ||| ||    
T  23370788 tacacttgtactttgtcaactcttcaaagaaggacaagcacccagtgcttttcaaatgaccgttggtacctcccttttaattcttcgttttctcagatga 23370887  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa----------- 188  Q
    || |||    || | ||||||| ||||| ||||||| || ||| | |||||||||||||||||||| ||||||||||||||||||||||               
T  23370888 ggataaaacgaaaa-acagctcctttgaaatttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 23370986  T
Q  189 ------ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
          ||||||||||||||| ||||||||| ||||| |||||| |||||| ||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  23370987 gatggactttgcttctgatgatcttctgcttctgatgacgtcatcacttcagaggcatttgaaacttcagaagcacttcatagcttcagacgtagttttc 23371086  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||                | |||||||  ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23371087 ttcagatgcttta----------------gattccttttttctctattgttcttccaagacctattgaaattgattaactttgcctatg 23371159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 23271245 - 23271043
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||||||||||||| ||||||  || |||||| ||||||||||    
T  23271245 tacacttgtactttgtcaactcttcaatgaaggacaagcacccaatgtttttcaaatgaacgttggcaccttccttttagtctttcgctttcttagacga 23271146  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaac-tttgcttct 198  Q
    |||||| | ||| |||||||||||| || | ||||| || |||||||||||||||||||||||||| ||||   |||||||||||||||| |||||||||    
T  23271145 ggttaaatccaaaagacagctcttt-gaaacttcaggttgaatcttctgatcaactgtagcttctggtgattc-atagcttctgatgaacttttgcttct 23271048  T
Q  199 gatga 203  Q
    |||||    
T  23271047 gatga 23271043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 246 - 370
Target Start/End: Original strand, 28903746 - 28903870
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagaccta 345  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||    
T  28903746 cttcaggagcacttcataacttcagacgcagttttcttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagaccta 28903845  T
Q  346 ttgaaatttattaactttgcctatg 370  Q
    || || || || ||||||| |||||    
T  28903846 ttaaatttgatcaactttgtctatg 28903870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 23783747 - 23783866
Alignment:
Q  177 gcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgca 275  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| | ||| ||||| ||||||||||||||||||||||||    
T  23783747 gcttctgatgaactttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgaagcttcataaacacttcatagcttcagacgca 23783846  T
Q  276 gttttc-ttcagatgcttta 294  Q
    |||||| |||||||||||||    
T  23783847 gttttcattcagatgcttta 23783866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 192 - 370
Target Start/End: Original strand, 3833174 - 3833337
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||| | | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  3833174 tgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaagcacttcatagcttcagacgcagttttcttcagatgc 3833273  T
Q  291 tttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||                | |||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||    
T  3833274 ttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgcttaactatgcctatg 3833337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 40003491 - 40003596
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| || || || |||||||    
T  40003491 cttcagaggcagatttcttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctattaaatttgatcaactttg 40003590  T
Q  365 cctatg 370  Q
     |||||    
T  40003591 tctatg 40003596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 370
Target Start/End: Original strand, 23380768 - 23380918
Alignment:
Q  205 cttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactct 303  Q
    ||||||||| ||||| |||||| |||||| ||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||             
T  23380768 cttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttctgatgcttta--------- 23380858  T
Q  304 tcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
           | |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23380859 -------gattcctttgttctctattgttcttccaagacctattgaaattgattaactttgcctatg 23380918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 295
Target Start/End: Original strand, 3844226 - 3844349
Alignment:
Q  174 atagcttctgatgaact-ttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcaga 271  Q
    ||||||||||||||| | |||||| ||||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| |||||||||||| ||||    
T  3844226 atagcttctgatgaaatcttgcttatgatgcacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagctccaga 3844325  T
Q  272 cgcagttttcttcagatgctttag 295  Q
    | |||||||||||||||| |||||    
T  3844326 ctcagttttcttcagatgttttag 3844349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 21541272 - 21541351
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||| |||| ||||||||||||||||||| | ||||| ||| || ||||||||||||||||||||||||||||||||    
T  21541272 cttcagaggcagatttcttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttccaagacct 21541351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 8032313 - 8032418
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||  | || ||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  8032313 cttcagaggcagatttcttcagatgcttctaggtttctcttcacgttgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaacttt 8032411  T
Q  364 gcctatg 370  Q
    | |||||    
T  8032412 gtctatg 8032418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 18534919 - 18534814
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||  | || ||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  18534919 cttcagaggcagatttcttcagatgcttctaggtttctcttcacgttgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaacttt 18534821  T
Q  364 gcctatg 370  Q
    | |||||    
T  18534820 gtctatg 18534814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 8032059 - 8032241
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| |||||||||||||||||| ||| || |||||||||| || ||||||||||| |||||||||||||| || |||  || |||||| ||||||||||    
T  8032059 tacatttgtactttgtcaactct-caaggaaggacaagcacccaatgcttttcaaacgaacgttggcaccttccctttagtctttcgctttcttagacga 8032157  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctga 184  Q
    |||| |   ||| ||||| ||  ||||| | |||||||| ||||| ||||||||||  || |||| ||| | |||||||||||||    
T  8032158 ggttgaaaccaatagacaact-atttgaaacttcagattgaatctcctgatcaacttcagtttctggtgtttatatagcttctga 8032241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 17518901 - 17518831
Alignment:
Q  278 tttcttcagatgcttt-aggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    |||||||||||||||| | ||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  17518901 tttcttcagatgcttttaagtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 17518831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 29379881 - 29379978
Alignment:
Q  273 gcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||| ||||||||||||||| |||||| ||||||||| || ||||||| |||||||||||||||||||||||| || ||||| || ||||||| |||||    
T  29379881 gcagatttcttcagatgcttctaggtttctcttcttgttgattcctttactctcttttgttcttccaagacctgtt-aaattgatcaactttgtctatg 29379978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 23271004 - 23270921
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||| || ||||||||||||| | |||||||||||||| ||||    
T  23271004 cttcagatgcagatttcttcagatgcttctaggtttctcttcttgttgattcctttgctctcctatgttcttccaagacttatt 23270921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 19225329 - 19225467
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  19225329 tgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcacttcag-cttcag 19225427  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||  | ||||||||||||||||||||||||||||||    
T  19225428 aaacactata-agcttcagacgcagttttcttcagatgctt 19225467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 22135600 - 22135543
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||    
T  22135600 ttcctttgctctctattgttcttccaagacctattgaaaatgattaacttcgcctatg 22135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 22166749 - 22166692
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||    
T  22166749 ttcctttgctctctattgttcttccaagacctattgaaaatgattaacttcgcctatg 22166692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 19418747 - 19418884
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  19418747 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 19418845  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     |  |||||| |||||||||||||||||||||||||||||    
T  19418846 gagtacttca-agcttcagacgcagttttcttcagatgct 19418884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 19429324 - 19429461
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  19429324 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 19429422  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     |  |||||| |||||||||||||||||||||||||||||    
T  19429423 gagtacttca-agcttcagacgcagttttcttcagatgct 19429461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 16747436 - 16747550
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| ||||||||||||  |||||||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||    
T  16747436 gcttctgatgaccttctgcttctgatgagtttctgcttctgatgacgtcatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgc 16747532  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  16747533 agttttcttcagatgctt 16747550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 3844351 - 3844408
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| ||||||||||||||||||||||||||   ||||| ||||||||    
T  3844351 ttcctttgctctctattgttcttccaagacctattgaaattgcctaactatgcctatg 3844408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18153974 - 18154079
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||||| | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  18153974 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgctctccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 18154073  T
Q  99 gaggtt 104  Q
    ||||||    
T  18154074 gaggtt 18154079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 293
Target Start/End: Complemental strand, 22623202 - 22623113
Alignment:
Q  206 ttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||||| ||||| ||||||| ||||| ||||| || |  ||||||||| |||||| | ||||||||||||||||||||||||||||||    
T  22623202 ttctgcttctgatgacgtcatttcttcagaggcactttgttacttcagaagcacttcttggcttcagacgcagttttcttcagatgcttt 22623113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 28903514 - 28903686
Alignment:
Q  32 ggacaagcactcagtgcttttcaaatgaac-gttggcacctcccttttgatccttcgctctcttagacgaggttaacttcaagagacagctcttttgaga 130  Q
    |||||||||  ||||||||||||||||||| |||| |||||  | |||  || |||||| |||||||||||||| | | ||| | ||| || ||| || |    
T  28903514 ggacaagcatccagtgcttttcaaatgaaccgttgccacctttcctttagtctttcgctttcttagacgaggttgaatccaataaacaactattt-gaaa 28903612  T
Q  131 tttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatga 203  Q
     || || ||  |||||||||| || ||||||||||| ||||  |||||||||||||||| ||||||||||||||    
T  28903613 ctttaggttgcatcttctgatgaattgtagcttctggtgattttatagcttctgatgaattttgcttctgatga 28903686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 29379612 - 29379724
Alignment:
Q  9 tactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacgaggttaac 107  Q
    ||||||||||||||| || |||||||||||| | || ||||||||||||||| ||||| ||||| |  |||  || |||||| |||||||||||||| |     
T  29379612 tactttgtcaactct-cattgagggacaagcgcccaatgcttttcaaatgaaccgttgccaccttctctttagtctttcgctttcttagacgaggttgaa 29379710  T
Q  108 ttcaagagacagct 121  Q
    ||||| ||||||||    
T  29379711 ttcaatagacagct 29379724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 344
Target Start/End: Original strand, 1237960 - 1238031
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    |||||||||||||||||||||| | | | ||| ||| || |||||||||||| | |||||||||||||||||    
T  1237960 gcagttttcttcagatgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacct 1238031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 40003260 - 40003358
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||| || ||| |||||||||| || ||||||||||||||| ||||| ||||| || |||  || |||| | ||||||||||||||    
T  40003260 ttgtactttgtcaactct-cattgaaggacaagcacccaatgcttttcaaatgaaccgttgccaccttccctttagtctttcgttttcttagacgaggtt 40003358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 362
Target Start/End: Complemental strand, 18768982 - 18768813
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||    
T  18768982 gcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgc 18768886  T
Q  275 agttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    ||||||||||||||||||||   |               ||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  18768885 agttttcttcagatgctttaaaat---------------tcctttgctctccattgttcttccaagacctattgaaattaattgactt 18768813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 20161114 - 20160977
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  20161114 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 20161016  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  20161015 aagcactt--tagcttcagacgcagttttcttcagatgctt 20160977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 20196353 - 20196490
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  20196353 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 20196451  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  20196452 aagcactt--tagcttcagacgcagttttcttcagatgctt 20196490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 30314581 - 30314444
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  | ||||||||||| | ||||||||| || || |||||| |||||| | ||| |  |  ||||||    
T  30314581 tgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgttgacgtcatcacttcagatgcacttcag-cttcag 30314483  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||||  |||||||||||||||||||||||||||||    
T  30314482 aagcacttca--gcttcagacgcagttttcttcagatgctt 30314444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16747240 - 16747345
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  16747240 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 16747339  T
Q  99 gaggtt 104  Q
    ||||||    
T  16747340 gaggtt 16747345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 18158744 - 18158790
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgcttta 294  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||||    
T  18158744 cttcagaagcactt--tagcttcagacgcagttttcttcagatgcttta 18158790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 23269635 - 23269586
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    ||||||||||||   |||||||||||||||||||||||||||||| ||||    
T  23269635 ttcctttgctcttcattgttcttccaagacctattgaaatttattgactt 23269586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 23269753 - 23269640
Alignment:
Q  178 cttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgca 275  Q
    |||||||||| ||| |||||| ||||| ||||||||| ||||| |||||| |||||| | ||| |  |  |||||||| |||||  ||||||||||||||    
T  23269753 cttctgatgaccttctgcttccgatgagcttctgcttctgatgacgtcatcacttcagaagcacttcag-cttcagaagcactt--tagcttcagacgca 23269657  T
Q  276 gttttcttcagatgctt 292  Q
    |||||||||||||||||    
T  23269656 gttttcttcagatgctt 23269640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 31215450 - 31215565
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  |||||||| ||||  | ||||||||||||    
T  31215450 gcttctgatgaccttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcacttcag-cttcagaagcactata-agcttcagacgc 31215547  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  31215548 agttttcttcagatgctt 31215565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 40212901 - 40212852
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||| ||||    
T  40212901 ttcctttgctttctattgttcttccaagacctattgaaattgattgactt 40212852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 16747555 - 16747595
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  16747555 ttcctttgctctccattgttcttccaagacctattgaaatt 16747595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 23457045 - 23457005
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  23457045 ttcctttgctctccattgttcttccaagacctattgaaatt 23457005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 23469201 - 23469161
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  23469201 ttcctttgctctccattgttcttccaagacctattgaaatt 23469161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 26734757 - 26734717
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  26734757 ttcctttgctctccattgttcttccaagacctattgaaatt 26734717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 17519178 - 17519029
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    ||||||||||| |||||| || |||||||||| ||  || ||||||||||||||| ||||| ||||| || |||  || |||||| |||| |||||||||    
T  17519178 ttgtactttgttaactct-cattgagggacaaacatccaatgcttttcaaatgaaccgttgccaccttccctttagtctttcgctttcttggacgaggtt 17519080  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
     | | ||| ||||||||  ||||| | ||| | || ||||||||||||||||    
T  17519079 gaatccaatagacagct-atttgaaacttcgggttgaatcttctgatcaact 17519029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 353
Target Start/End: Original strand, 18158794 - 18158833
Alignment:
Q  314 tcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  18158794 tcctttgctctccattgttcttccaagacctattgaaatt 18158833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 344
Target Start/End: Original strand, 19927337 - 19927408
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||||||| ||| |||||| | | | ||| ||| ||||||||||||||| | |||||||||||||||||    
T  19927337 gcagttttctttagacgctttaagcttccctttttgttggttcctttgctctttattgttcttccaagacct 19927408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 26734806 - 26734762
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||    
T  26734806 cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 26734762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 31215410 - 31215476
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  31215410 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 31215476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 3221028 - 3221108
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  3221028 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 3221108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 16436952 - 16436879
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||| ||||||||||| ||| ||||| ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  16436952 gatcaaatgtagcttctggtgaagatattgcttctgatgaaaaccttgcttctgatgatcttctgcttctgatg 16436879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 18769029 - 18768956
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  18769029 gatcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 18768956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 23783869 - 23783927
Alignment:
Q  313 ttcctttgctctcttttgttcttcc-aagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||| | |||||||||||||||| | |||||||| |||||    
T  23783869 ttcctttgctctctattgttctttcgaagacctattgaaattgaataactttgtctatg 23783927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 26111620 - 26111708
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||| ||||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||| ||||||    
T  26111620 gatcaaatgtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcatcacttca 26111708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Original strand, 1745437 - 1745466
Alignment:
Q  265 cttcagacgcagttttcttcagatgcttta 294  Q
    ||||||||||||||||||||||||||||||    
T  1745437 cttcagacgcagttttcttcagatgcttta 1745466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 18154224 - 18154266
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||    
T  18154224 acttcagaagcactt--tagcttcagacgcagttttcttcagatg 18154266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18158494 - 18158599
Alignment:
Q  1 tacacttgtactttgtcaact-cttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||| | | || || ||||||| ||||||| || | ||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  18158494 tacacttgtactttgtcaactccgttaacgaaggacaagtactcagttctctccaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 18158593  T
Q  99 gaggtt 104  Q
    ||||||    
T  18158594 gaggtt 18158599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 22623105 - 22623052
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||  |||||||||||||||||||||||||| | | ||||||| ||||    
T  22623105 tttgctctccattgttcttccaagacctattgaaattgaatgactttgcatatg 22623052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 28691296 - 28691361
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaac-tttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||||| ||||||||||| | |||||||||||||| ||| ||||| |||||    
T  28691296 tgtagcttctggtgatgatatcgcttctgatgaccttttgcttctgatgaccttttgcttctgatg 28691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 28691386 - 28691415
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  28691386 agcttcagacgcagttttcttcagatgctt 28691415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 30325087 - 30325058
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  30325087 agcttcagacgcagttttcttcagatgctt 30325058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 18154273 - 18154313
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||| ||||||||    
T  18154273 ttcctttgctctccattgttcttccaagaccttttgaaatt 18154313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 147)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 21736338 - 21736710
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21736338 tacacttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttggcacttcccttttgatccttcgctctcttagacga 21736437  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata-----------------gcttct 182  Q
    ||||||||| |||| |||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||                 ||||||    
T  21736438 ggttaacttaaagaaacagctcttttgagattctagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 21736537  T
Q  183 gatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||    
T  21736538 gatgaactttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgtaacttcagaaacacttcatagcttcagacgcagttttc 21736637  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||                |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||    
T  21736638 ttcagatgcttta----------------ggttcctttgctctttattgttcttccaagacctattgaaattgattaactttgcctatg 21736710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 31113993 - 31113609
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| ||| ||| ||||||||  || |||||||||||||||||    
T  31113993 tacacttgtactttgtcaactcttcaatgaaggacaagcacctagtgcttttcaaatgaacattgtcacttcccttttagtctttcgctctcttagacga 31113894  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctg 199  Q
    |||||| | ||| | ||||| | |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  31113893 ggttaaatccaataaacagc-catttgagctttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaa-gttgcttctg 31113796  T
Q  200 atga---------------acttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttctt 283  Q
    ||||               | |||||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||||| | |||||||||||||||||||    
T  31113795 atgaatttttcttctgatgagttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttctt 31113696  T
Q  284 cagatgctttaggttactcttcttgatg-gttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||| ||||||||||||  ||  |||||| |||||||||||||||||||||||| ||||| || |||||||||||||    
T  31113695 cagatgctttaggttcctcttcttgatgattttttttgctttcttttgttcttccaagacctatt-aaattgatcaactttgcctatg 31113609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 15651077 - 15650783
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||   ||||||| |||||||||||||| || ||||||||| | ||||||||||||||||| ||||||||||    
T  15651077 tacacttgtactttgtcaactcttcaatgagatgcaagcacccagtgcttttcaaaggaccgttggcactttccttttgatccttcgctttcttagacga 15650978  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    ||||||| | ||||  |||||| |||| |||| |||||| |||| |||||||| ||||||||||| ||||||||||||||||||| ||| | ||||||||    
T  15650977 ggttaacgtaaagaatcagctc-tttgtgattccagattgaatcctctgatcagctgtagcttctggtgatgatatagcttctgacgaaatcttgcttct 15650879  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
     ||| |||||||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||| ||||||||||||| | |||||||||||||||||    
T  15650878 catggacttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcactttatagcttcagacgtacttttcttcagatgcttt 15650783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 15662712 - 15662418
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||   ||||||| |||||||||||||| || |||| |||| | ||||||||||||||||| ||||||||||    
T  15662712 tacacttgtactttgtcaactcttcaatgagatgcaagcacccagtgcttttcaaacgaccgttcgcactttccttttgatccttcgctttcttagacga 15662613  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    ||||||| | ||||  |||||| |||| |||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||    
T  15662612 ggttaacgtaaagaatcagctc-tttgtgattccagattgaatcctctgatcaactgtaacttctggtgatgatatagcttctgatgaaatcttgcttct 15662514  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||| |||||||||| ||||| | ||||||||||  ||||| | |||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  15662513 gatggacttctgcttctgatgacatcattacttcggaggcacttgaaacttcagaagcactttatagcttcagacacagttttcttcagatgcttt 15662418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 77 - 370
Target Start/End: Complemental strand, 23680330 - 23680050
Alignment:
Q  77 ttgatccttcgctctcttagacgaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatat 175  Q
    ||||||||||||||||||||||||||||||| | ||||  ||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||    
T  23680330 ttgatccttcgctctcttagacgaggttaacataaagaatcagctcttttgagatttcagattgaatcttctgatccactgtagcttttggtgatgatat 23680231  T
Q  176 agcttctgatgaact-ttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacg 273  Q
    ||||||||||||| | ||||||||||||||||| ||||| |||||  ||||| |||||| || || | |||||||||||| |||||||||||||||||||    
T  23680230 agcttctgatgaaatcttgcttctgatgaactt-tgcttctgatgatgtcatcacttcagagacacttgaaacttcagaagcacttcatagcttcagacg 23680132  T
Q  274 cagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||||||    |||           | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23680131 cagttttcttcagatgctt----tta-----------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 23680050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 77 - 370
Target Start/End: Complemental strand, 24052567 - 24052287
Alignment:
Q  77 ttgatccttcgctctcttagacgaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatat 175  Q
    ||||||||||||||||||||||||||||||| | ||||  ||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||    
T  24052567 ttgatccttcgctctcttagacgaggttaacataaagaatcagctcttttgagatttcagattgaatcttctgatccactgtagcttttggtgatgatat 24052468  T
Q  176 agcttctgatgaact-ttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacg 273  Q
    ||||||||||||| | ||||||||||||||||| ||||| |||||  ||||| |||||| || || | |||||||||||| |||||||||||||||||||    
T  24052467 agcttctgatgaaatcttgcttctgatgaactt-tgcttctgatgatgtcatcacttcagagacacttgaaacttcagaagcacttcatagcttcagacg 24052369  T
Q  274 cagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||||||    |||           | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  24052368 cagttttcttcagatgctt----tta-----------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 24052287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 2246595 - 2246967
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  2246595 tacacttgtactttgtcaactcttcaatgaaggacaaacacctagtgcttttcaaatgaacgttggtacctcccttttaatccttcgttctcttagacga 2246694  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctt------ 191  Q
    ||||||   | | | ||| ||| ||||| | || || || ||| | ||||||||||||||||||| |||||||||||||||||||||||  |||          
T  2246695 ggttaa-aacgaaaaacaactcctttgaaactttagtttaaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 2246793  T
Q  192 ----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
              |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  |||| |||| ||||||||||||||||||||||||||    
T  2246794 gatggacttatgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttaagaaccacttcatagcttcagacgcagtttt 2246893  T
Q  281 cttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||                | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  2246894 cttcagatgcttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 2246967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 27173060 - 27173422
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||| | | |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||    
T  27173060 tacatttgtactttgtcaactcttcaataaag-acaagcacccagtgcttttcaaatgaccgttggcacctcccttttgatctttcgctcttttagatga 27173158  T
Q  101 ggttaacttc-aagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctgtgatgatata-gcttctgatgaactttgcttct 198  Q
    |||| | ||| |||| |||   |||||||    ||| |||  | |||||| | || | | |||||||  ||||  |  ||||||||||   | |||||||    
T  27173159 ggtttatttccaagaaacactccttttga----tca-attgtagcttctggtgaaatttggcttctg--atgacttctgcttctgatgccttctgcttct 27173251  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||  ||||||||| ||||| |||||| | |||| ||||  | |||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |    
T  27173252 gatgt-cttctgcttctgatgacgtcatcatttcagaggctcttgaaacttcagaagcacttcttagcttcagacgcagttttcttcagatgttttagat 27173350  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    | ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  27173351 tcctctttttgatggtttctttgctctcttttgttcttccaagacctattg-aattaataaactttgcctatg 27173422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 13199249 - 13199029
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||| || |||||| ||| ||||||||||||||||| |||||| ||||||||||| || | ||| ||||||||||||    
T  13199249 tacacttgtactttgtcaactcttcaaagaaggacaaacacccagtgcttttcaaatgaccgttggtacctcccttttaattcatcgttctcttagacga 13199150  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatt-taatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||||   | | | ||||||| ||||| | ||||| ||  ||| ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  13199149 ggttaa-aacgaaaaacagctcctttgaaacttcagtttaaaatattctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 13199051  T
Q  198 tgatgaacttctgcttttgatg 219  Q
    ||||| |||||||||| |||||    
T  13199050 tgatggacttctgcttctgatg 13199029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 51989150 - 51989027
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||  || |||||||||||||||||    
T  51989150 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggcaccttccttttagtctttcgctctcttagacga 51989051  T
Q  101 ggttaacttcaagagacagctctt 124  Q
    |||||| | ||| |||||||||||    
T  51989050 ggttaaatccaatagacagctctt 51989027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 29933565 - 29933216
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||| ||||||| |||||  ||||| ||||| || ||||| ||||       |    
T  29933565 tacacttgtactttgtcaactcttcaaagaaggacaagcactccgtgctttccaaatgaccgttgatacctctcttttaattcttcgttctca------a 29933472  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaa-tcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    |||| |   | ||| ||| ||| ||||| | ||||| || || |   || ||||| ||||||||||| |||| ||||||||||||||||| | |||||||    
T  29933471 ggttgaaa-cgagaaacaactcctttgaaacttcagtttaaaataaactaatcaaatgtagcttctggtgattatatagcttctgatgaaatattgcttc 29933373  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    ||||| |||||||||| ||||| ||||||||||||| ||||| | |  | ||||||| |||||  ||||||||||||||||||||||||||||||||||     
T  29933372 tgatggacttctgcttctgatgacgtcattacttcagaggcacttgttagttcagaagcactt--tagcttcagacgcagttttcttcagatgctttagc 29933275  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |               ||| |||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||    
T  29933274 t---------------ttcttttgctctctattgctcttccaagacctattgaaattgattgactttgcctatg 29933216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 29982719 - 29982370
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||||| ||||||| |||||  ||||| ||||| || ||||| ||||       |    
T  29982719 tacacttgtactttgtcaactcttcaaagaaggacaagcactccgtgctttccaaatgaccgttgatacctctcttttaattcttcgttctca------a 29982626  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaa-tcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    |||| |   | ||| ||| ||| ||||| | ||||| || || |   || ||||| ||||||||||| |||| ||||||||||||||||| | |||||||    
T  29982625 ggttgaaa-cgagaaacaactcctttgaaacttcagtttaaaataaactaatcaaatgtagcttctggtgattatatagcttctgatgaaatattgcttc 29982527  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    ||||| |||||||||| ||||| ||||||||||||| ||||| | |  | ||||||| |||||  ||||||||||||||||||||||||||||||||||     
T  29982526 tgatggacttctgcttctgatgacgtcattacttcagaggcacttgttagttcagaagcactt--tagcttcagacgcagttttcttcagatgctttagc 29982429  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |               ||| |||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||    
T  29982428 t---------------ttcttttgctctctattgctcttccaagacctattgaaattgattgactttgcctatg 29982370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 16665959 - 16665825
Alignment:
Q  158 tagcttctg-tgatgatatagcttctgatgaa-ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaa 254  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||  ||||||||| ||||| ||||||||||||| ||||| | |  |||||||||     
T  16665959 tagcttctgatgatgatatagcttctgatgaaaccttgcttctgatggtcttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaag 16665860  T
Q  255 cacttcatagcttcagacgcagttttcttcagatg 289  Q
    |||||| ||||||||||||||||||||||||||||    
T  16665859 cacttcttagcttcagacgcagttttcttcagatg 16665825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 1053937 - 1054232
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| ||  |||||| ||||||||| |||||  | ||||||||  || ||||| |||||||||||    
T  1053937 tacacttgtactttgtcaactctgataacgaaggacaagtacctagtgctcttcaaatgaccgttgatatctccctttcaattcttcgttctcttagacg 1054036  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||  ||||||||||| ||||||||||||||||   ||| | |||||||    
T  1054037 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctatagaaatcttgcttc 1054135  T
Q  198 tgatgaacttctgcttttgatgc-gtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||| |||||||||| |||||  |||||||||||| ||||| | |  ||||||||| |||||  ||||||||||| ||||||||||||||||||||    
T  1054136 tgatggacttctgcttctgatgatgtcattacttcagaggcacttgttacttcagaagcacttattagcttcagacacagttttcttcagatgcttt 1054232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 13148569 - 13148651
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  13148569 cttcagaggcagatttcttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 13148651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 370
Target Start/End: Original strand, 10529386 - 10529727
Alignment:
Q  8 gtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaac 107  Q
    |||||||||||||||| |||||| |||||||||| || ||||||||||| |||||||||||| | ||||| | || |||||| || ||||||||||| |     
T  10529386 gtactttgtcaactct-caatgaaggacaagcacccaatgcttttcaaacgaacgttggcactttcctttag-tctttcgctttcctagacgaggttgaa 10529483  T
Q  108 ttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatgaact 206  Q
    | ||| |  ||||| ||| || | || || ||  |||||||||| | |||||||||||| |||| | | ||||||||||||||||||||||||||||       
T  10529484 tccaataaccagctattt-gaaactttaggttgcatcttctgatgagctgtagcttctggtgat-acacagcttctgatgaactttgcttctgatga--- 10529578  T
Q  207 tctgcttttgatgcgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttc 305  Q
                 |||||| |||||| ||||| || |   |||||| | |||| |||| ||||| ||||||||||||||||||| |||||| | ||||||    
T  10529579 -------------cgtcatcacttcagaggcactttgt--cttcaggagcactccataacttcacacgcagttttcttcagatgttttaggcttctcttc 10529663  T
Q  306 ttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||| || |  |||||||||||||||||||||||||||||||| ||||| || ||||||| |||||    
T  10529664 ttgttgatatctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgtctatg 10529727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 8739924 - 8739822
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  8739924 tgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttctgagcttcagacgcagttttcttcagatgc 8739825  T
Q  291 ttt 293  Q
    |||    
T  8739824 ttt 8739822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 9092162 - 9092060
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  9092162 tgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttctgagcttcagacgcagttttcttcagatgc 9092063  T
Q  291 ttt 293  Q
    |||    
T  9092062 ttt 9092060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 16077367 - 16077469
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| | ||||||||||| ||||| | |  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  16077367 tgcttctgatgaacttctgcttctgatgacttcattacttcagaggcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgc 16077466  T
Q  291 ttt 293  Q
    |||    
T  16077467 ttt 16077469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 8758293 - 8758193
Alignment:
Q  194 cttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||| | |  |||||||||  ||||| |||||||||||||||||||||||||||||||    
T  8758293 cttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagaacttcttagcttcagacgcagttttcttcagatgctt 8758194  T
Q  293 t 293  Q
    |    
T  8758193 t 8758193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 17022336 - 17022426
Alignment:
Q  273 gcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    |||| ||||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  17022336 gcagatttcttcagatgcttctaggtttctcttcttgatgattccttagctctcttttgttcttccaagacctatt-aaattgattaacttt 17022426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 370
Target Start/End: Complemental strand, 29906004 - 29905821
Alignment:
Q  172 atatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttca 269  Q
    |||| |||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  | ||||||  |||||  ||||||||    
T  29906004 atattgcttctgatggacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttagttcagaggcactt--tagcttca 29905907  T
Q  270 gacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctat 369  Q
    |||||||||||||||||||||||||| || ||               |||||||||| |||||||||||||||||||||||||| ||| | |||||||||    
T  29905906 gacgcagttttcttcagatgctttagctttct---------------tttgctctctattgttcttccaagacctattgaaattgattgattttgcctat 29905822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 370
Target Start/End: Complemental strand, 29947169 - 29946986
Alignment:
Q  172 atatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttca 269  Q
    |||| |||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  | ||||||  |||||  ||||||||    
T  29947169 atattgcttctgatggacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttagttcagaggcactt--tagcttca 29947072  T
Q  270 gacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctat 369  Q
    |||||||||||||||||||||||||| || ||               |||||||||| |||||||||||||||||||||||||| ||| | |||||||||    
T  29947071 gacgcagttttcttcagatgctttagctttct---------------tttgctctctattgttcttccaagacctattgaaattgattgattttgcctat 29946987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 370
Target Start/End: Complemental strand, 29996323 - 29996140
Alignment:
Q  172 atatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttca 269  Q
    |||| |||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  | ||||||  |||||  ||||||||    
T  29996323 atattgcttctgatggacttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttagttcagaggcactt--tagcttca 29996226  T
Q  270 gacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctat 369  Q
    |||||||||||||||||||||||||| || ||               |||||||||| |||||||||||||||||||||||||| ||| | |||||||||    
T  29996225 gacgcagttttcttcagatgctttagctttct---------------tttgctctctattgttcttccaagacctattgaaattgattgattttgcctat 29996141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 1064576 - 1064678
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||||||||| | ||| ||||||||||||| ||||| | |  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  1064576 tgcttctgatggacttctgcttctaatgacgtcattacttcagaggcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgc 1064675  T
Q  291 ttt 293  Q
    |||    
T  1064676 ttt 1064678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 17022065 - 17022213
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtta 105  Q
    |||||||||||||||||| |||||| ||||||||||  | ||||||||||| |||||||||||||| || |||  || |||||| ||||||||||||||     
T  17022065 ttgtactttgtcaactct-caatgaaggacaagcacctaatgcttttcaaacgaacgttggcaccttccctttagtctttcgctttcttagacgaggttg 17022163  T
Q  106 acttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    | | ||| ||||||||  ||||| | ||||| || ||||||||||||||||    
T  17022164 aatccaatagacagct-atttgaaacttcaggttgaatcttctgatcaact 17022213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 27883611 - 27883831
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| |||||||||| ||||||||| |||||  |||||||| |  || ||||| |||||||||||    
T  27883611 tacacttgtactttgtcaactctgataacgaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctgtcaattcttcgttctcttagacg 27883710  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |   | | | ||||||| |||||   ||||| || ||| | |||||||| |||||||||| |||||||||| |||||||||||| | |||||||    
T  27883711 aggttga-aacgaaaaacagctcctttgaatcttcagtttaaatttactgatcaattgtagcttctggtgatgatatcgcttctgatgaaatcttgcttc 27883809  T
Q  198 tgatgaacttctgcttttgatg 219  Q
    |||||  ||||||||| |||||    
T  27883810 tgatggtcttctgcttctgatg 27883831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 41045775 - 41045959
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggca-cctcccttttgatccttcgctctcttagacg 99  Q
    |||| ||||||||||||||||||||||||| |||||| ||| |||||||||||||  ||||||||||| | ||||||||  || |||||| ||||||| |    
T  41045775 tacaattgtactttgtcaactcttcaatgaaggacaaacacccagtgcttttcaagcgaacgttggcatcttcccttttagtctttcgctttcttagatg 41045874  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctga 184  Q
    ||||| | | ||  ||||||||  ||||| | ||||| || ||||| ||||||||||  || ||||| |||| |||||||||||||    
T  41045875 aggttgaatccactagacagct-atttgaaacttcaggttgaatctcctgatcaacttcagtttctgatgattatatagcttctga 41045959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 11908834 - 11908755
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||| |||| ||||||||||||||||||| | ||||| ||| || ||||||||||||||||||||||||||||||||    
T  11908834 cttcagaggcagatttcttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttccaagacct 11908755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 17281229 - 17281127
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||| ||||| ||||| ||||||||||||| | ||| | |  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  17281229 tgcttctgatggacttttgcttctgatgacgtcattacttcagatgcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgc 17281130  T
Q  291 ttt 293  Q
    |||    
T  17281129 ttt 17281127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 13198933 - 13198876
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13198933 ttcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 13198876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 29947349 - 29947261
Alignment:
Q  4 acttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctc 92  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||  ||||| ||||| || ||||| ||||    
T  29947349 acttgtactttgtcaactcttcaaagaaggacaagcactccgtgcttttcaaatgaccgttgatacctctcttttaattcttcgttctc 29947261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 29996503 - 29996415
Alignment:
Q  4 acttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctc 92  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||  ||||| ||||| || ||||| ||||    
T  29996503 acttgtactttgtcaactcttcaaagaaggacaagcactccgtgcttttcaaatgaccgttgatacctctcttttaattcttcgttctc 29996415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 12752470 - 12752391
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||| |||| ||||||||||||||||||| | ||||| ||| || ||| ||||||||||||||||||||||||||||    
T  12752470 cttcagaggcagatttcttcagatgctttaggcttctctttttgttgattcttttgctctcttttgttcttccaagacct 12752391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 370
Target Start/End: Original strand, 22151563 - 22151654
Alignment:
Q  279 ttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||||||| ||||| ||| || |||||||||||||||||||| || ||||||||||| || || || ||||||| |||||    
T  22151563 ttcttcagatgctttaggtttctctttttgttgattcctttgctctcttttgtttttacaagacctattaaatttgatcaactttgtctatg 22151654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 293
Target Start/End: Original strand, 14581512 - 14581670
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatgc-----------gtcattacttcaa 233  Q
    |||||||  ||||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||||| ||||||           ||||| ||||||     
T  14581512 ctgatcacttgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatga-cttctgcttctgatgccttctgatgacgtcatcacttcag 14581610  T
Q  234 aggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||| | |  ||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  14581611 aggcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagaagcttt 14581670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 19887205 - 19887067
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  19887205 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 19887107  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  19887106 aatcacttta-agcttcagacgcagttttcttcagatgctt 19887067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8995963 - 8995859
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   ||||| ||||||  ||||||||||||| |||||| |||||  ||||||||||  || ||||| |||||||||||    
T  8995963 tacacttgtactttgtcaactctgataatgaaggacaaatactcagtgcttttaaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 8995864  T
Q  100 aggtt 104  Q
    |||||    
T  8995863 aggtt 8995859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 29906184 - 29906096
Alignment:
Q  4 acttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctc 92  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||| ||||||| |||||  ||||| ||||| || ||||| ||||    
T  29906184 acttgtactttgtcaactcttcaaagaaggacaagcactccgtgctttacaaatgaccgttgatacctctcttttaattcttcgttctc 29906096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 8995753 - 8995651
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    |||||||||||| ||||||||| ||||| ||||||| ||||||||||| || |  |||||| || || ||| | ||||||||||||||||||||||||||    
T  8995753 tgcttctgatgatcttctgcttctgatgacgtcatttcttcaaaggcactttgtcacttcaaaagcatttcttggcttcagacgcagttttcttcagatg 8995654  T
Q  290 ctt 292  Q
    |||    
T  8995653 ctt 8995651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 9006305 - 9006203
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    |||||||||||| ||||||||||||||| ||||||| ||||| ||||| || |  ||||||||| |||||| | | || |||||||||||||||||||||    
T  9006305 tgcttctgatgatcttctgcttttgatgacgtcatttcttcagaggcactttgtcacttcagaagcacttcttggttttagacgcagttttcttcagatg 9006206  T
Q  290 ctt 292  Q
    |||    
T  9006205 ctt 9006203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 370
Target Start/End: Original strand, 41046021 - 41046118
Alignment:
Q  273 gcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||| ||||||||||||||| |||||| ||||||  | || |||||||||||||||||||| |||||||||||||| ||||| || ||||||| |||||    
T  41046021 gcagatttcttcagatgcttataggtttctcttcacgttgattcctttgctctcttttgtttttccaagacctatt-aaattgatcaactttgtctatg 41046118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 4404500 - 4404722
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctct-cttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||| | | ||||||| |||||  ||||||||||  || ||||| | | |||||||    
T  4404500 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgttctccaaatgaccgttgatacctccctttcaattcttcgtttttcttagac 4404599  T
Q  99 gaggttaacttcaagagacagctcttttgagat-ttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctttgc 194  Q
    |||||| |  | | || ||||||  |||| ||| ||||| || ||| | | |||||| |||||||||| |||||||||| ||||||||||||  | ||||    
T  4404600 gaggttgaaatga-gaaacagctactttg-gatcttcagtttgaatttacggatcaaatgtagcttctagtgatgatatcgcttctgatgaaaaccttgc 4404697  T
Q  195 ttctgatgaacttctgcttttgatg 219  Q
    ||||||||| |||||||||||||||    
T  4404698 ttctgatgaccttctgcttttgatg 4404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 11216579 - 11216435
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaa 244  Q
    |||||| | ||||||||| ||||||||| ||||||||||||  |||||||||||||||  |||||||| ||||| |||||| |||||| | | | |   |    
T  11216579 gatcaaatatagcttctggtgatgatatcgcttctgatgaaaactttgcttctgatgactttctgcttctgatgacgtcatcacttcagaagaact-tca 11216481  T
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
     |||||||| |||||  |||||||||||||||||||||||||||||||    
T  11216480 gcttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 11216435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 15650779 - 15650722
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| ||||||||| |||||||||||||||| | ||||||||||||||    
T  15650779 ttcctttgctctctattgttcttctaagacctattgaaattgaataactttgcctatg 15650722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 15662414 - 15662357
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||    
T  15662414 ttcctttgctctccattgttcttccaagacctattgaaattgaataactttgcctatg 15662357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 17281123 - 17281066
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  17281123 ttcctttgctctccattgttcttccaagacctattgaaattgattgactttgcctatg 17281066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 16670905 - 16670857
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  16670905 acttcagaagcacttcttagcttcagacgcagttttcttcagatgcttt 16670857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 6490200 - 6490119
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  6490200 tgtagcttctggtgatgatatagcttctgatgaaaaactttgcttctgatgaccttctgcttctgatgacgtcatcacttca 6490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 6500854 - 6500773
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  6500854 tgtagcttctggtgatgatatagcttctgatgaaaaactttgcttctgatgaccttctgcttctgatgacgtcatcacttca 6500773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 9981737 - 9981656
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  9981737 tgtagcttctggtgatgatatagcttctgatgaaaaactttgcttctgatgaccttctgcttctgatgacgtcatcacttca 9981656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 9993745 - 9993664
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  9993745 tgtagcttctggtgatgatatagcttctgatgaaaaactttgcttctgatgaccttctgcttctgatgacgtcatcacttca 9993664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 22151284 - 22151433
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||| || ||| |||||||||| || ||||||||||||||| ||||| |||||  | |||  || |||||| ||||||||||||||    
T  22151284 ttgtactttgtcaactct-cattgaaggacaagcacccaatgcttttcaaatgaaccgttgccacctttcctttagtctttcgctttcttagacgaggtt 22151382  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
     | | ||| | ||||||  ||||| | ||||| || ||||||||||||||||    
T  22151383 gaatccaaaaaacagct-atttgaaacttcaggttgaatcttctgatcaact 22151433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 29906044 - 29905973
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||||||||||| |||||||||| |||||    
T  29906044 atcaaatgtagcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatg 29905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 29947209 - 29947138
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||||||||||| |||||||||| |||||    
T  29947209 atcaaatgtagcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatg 29947138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 29996363 - 29996292
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||||||||||| |||||||||| |||||    
T  29996363 atcaaatgtagcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatg 29996292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 51988841 - 51988794
Alignment:
Q  300 ctcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  51988841 ctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 51988794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 13977993 - 13978043
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  13977993 cttcaggagcacttcataacttcagacgcagttttcttcagatgctttagg 13978043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 15833664 - 15833714
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  15833664 cttcaggagcacttcataacttcagacgcagttttcttcagatgctttagg 15833714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 15851210 - 15851260
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||    
T  15851210 cttcaggagcacttcataacttcagacgcagttttcttcagatgctttagg 15851260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 16665802 - 16665760
Alignment:
Q  328 ttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  16665802 ttgttcttccaagacctattgaaattgattaactttgcctatg 16665760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 17281440 - 17281251
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttc-gctctcttagac 98  Q
    |||||||||||||||||||||||   || || ||||||| || ||||||||||||||||| |||||  ||||||||||  || |||| | ||||||||||    
T  17281440 tacacttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcagttctcttagac 17281341  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa 188  Q
    |||||| |    || | ||||||| |||||    |||| || ||| | |||||||  ||||||||||| ||||||||||||||||||||||    
T  17281340 gaggttgaaacgaaaa-acagctcctttgaatcgtcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaa 17281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 934011 - 934149
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaactt--tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| || |||||| ||||||||||||  |  |||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  934011 tgtagcttctggtggtgatatcgcttctgatgaaaatcttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 934109  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  934110 aagcacttta-agcttcagacgcagttttcttcagatgctt 934149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 8739818 - 8739761
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||||||| ||||||||||||| | | ||||||||||||    
T  8739818 ttcctttgctctctattgttcttccaaaacctattgaaattgaatgactttgcctatg 8739761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 9092056 - 9091999
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||||||| ||||||||||||| | | ||||||||||||    
T  9092056 ttcctttgctctctattgttcttccaaaacctattgaaattgaatgactttgcctatg 9091999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 14581674 - 14581731
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||| |||||||||||||||||||||||||| | | ||||||| ||||    
T  14581674 ttcctttgctctctattgttcttccaagacctattgaaattgaatgactttgcatatg 14581731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 16077157 - 16077345
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| |||||||| | ||||||||| |||||  ||||||||||  || ||||  |||||||||||    
T  16077157 tacacttgtactttgtcaactctgataacgaaggacaagtactcagtgttcttcaaatgaccgttgatacctccctttcaattcttcattctcttagacg 16077256  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa 188  Q
    ||||| |   | | | ||||||| |||||   ||||| |  ||| | |||||||  |||||||||| |||||||||||||||||||||||    
T  16077257 aggttga-aacgaaaaacagctcctttgaatcttcagttaaaatttactgatcatttgtagcttctggtgatgatatagcttctgatgaa 16077345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 16077473 - 16077530
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||  ||| ||||||||||||    
T  16077473 ttcctttgctctccattgttcttccaagacctattgaaatagattgactttgcctatg 16077530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 16670853 - 16670796
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||   |||||||||||||||||||||||||| ||||||||| ||||||    
T  16670853 ttcctttgctcttcattgttcttccaagacctattgaaattgattaacttttcctatg 16670796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1064366 - 1064569
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||  ||  |||||| |||||| || |||||  ||||||||||  || ||||| |||||||||||    
T  1064366 tacacttgtactttgtcaactctgataacgaaggacaaatacctagtgctcttcaaacgaccgttgatacctccctttcaattcttcgttctcttagacg 1064465  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||  ||||||||||| |||||||||||||||||||||| | |||||||    
T  1064466 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 1064564  T
Q  198 tgatg 202  Q
    |||||    
T  1064565 tgatg 1064569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 4457391 - 4457436
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||    
T  4457391 acttcagaaacactt--tagcttcagacgcagttttcttcagatgctt 4457436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 292
Target Start/End: Complemental strand, 14321541 - 14321395
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgat-gcgtcattacttcaaaggcattag 242  Q
    ||||| || ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||  ||||||||||||| | ||| |      
T  14321541 ctgattaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgataacgtcattacttcagaagcact-c 14321443  T
Q  243 aaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
     | |||||||  |||||  ||||||||||| |||||||||||||||||||    
T  14321442 cagcttcagatgcactt--tagcttcagacacagttttcttcagatgctt 14321395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 16670994 - 16670931
Alignment:
Q  158 tagcttctg-tgatgatatagcttctgatg-aactttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||  |||||||||||||||    
T  16670994 tagcttctggtgatgatatagcttctgatgaaaccttgcttctgatggtcttctgcttttgatg 16670931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 344
Target Start/End: Original strand, 51341348 - 51341419
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    |||| ||| ||||||||||||||| | ||||| ||| |  ||| ||||||||||||||||||||||||||||    
T  51341348 gcagattttttcagatgctttaggcttctctttttgttaattcttttgctctcttttgttcttccaagacct 51341419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 15833577 - 15833638
Alignment:
Q  142 atcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatga 203  Q
    |||||||||| |||||||||||||| |||| | | ||||||||||||||||||||||||||||    
T  15833577 atcttctgatgaactgtagcttctggtgat-acacagcttctgatgaactttgcttctgatga 15833638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 29461064 - 29460927
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  29461064 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 29460966  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  29460965 aagcactt--tagcttcagacgcagttttcttcagatgctt 29460927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 29471916 - 29471779
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  29471916 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 29471818  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  29471817 aagcactt--tagcttcagacgcagttttcttcagatgctt 29471779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 1054236 - 1054292
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||| | ||| ||||||||||||    
T  1054236 ttcctttgctctccattgttcttccaagacctattgaaa-tgattgactttgcctatg 1054292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 1064682 - 1064738
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||| | ||| ||||||||||||    
T  1064682 ttcctttgctctccattgttcttccaagacctattgaaa-tgattgactttgcctatg 1064738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 8758189 - 8758133
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||| | ||| ||||||||||||    
T  8758189 ttcctttgctctccattgttcttccaagacctattgaaa-tgattgactttgcctatg 8758133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 9006515 - 9006414
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   ||||| ||||||  ||||||||||||| |||||  |||||  | ||||||||  || ||||| |||||||||||    
T  9006515 tacacttgtactttgtcaactctgataatgaaggacaaatactcagtgcttttaaaatgcccgttgatatctccctttcaattcttcgttctcttagacg 9006416  T
Q  100 ag 101  Q
    ||    
T  9006415 ag 9006414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12567277 - 12567172
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || |  ||||||| |||||||| | ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  12567277 tacacttgtactttgtcaactctgttaacgcaggacaagtactcagtgttcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 12567178  T
Q  99 gaggtt 104  Q
    ||||||    
T  12567177 gaggtt 12567172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13261680 - 13261575
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || |  ||||||| |||||||| | ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  13261680 tacacttgtactttgtcaactctgttaacgcaggacaagtactcagtgttcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 13261581  T
Q  99 gaggtt 104  Q
    ||||||    
T  13261580 gaggtt 13261575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 14254104 - 14254055
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  14254104 ttcctttgctctccattgttcttccaagacctattgaaattgattgactt 14254055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 14321390 - 14321341
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  14321390 ttcctttgctctccattgttcttccaagacctattgaaattgattgactt 14321341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 15226690 - 15226633
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||| ||||| ||| ||||||| ||||    
T  15226690 ttcctttgctctccattgttcttccaagacctatttaaattgattgactttgcttatg 15226633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 17909853 - 17909773
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  17909853 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttca 17909773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 23636094 - 23636232
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  |  |||||||||||| ||||||||| ||||| |||||| ||||||   ||| |  |  ||||||    
T  23636094 tgtagcttctggtgatgatttcgcttctgatgaaaaccctgcttctgatgaccttctgcttctgatgacgtcatcacttcaggagcacttcag-cttcag 23636192  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || ||||| | ||||||||||||||||||||||||||||||    
T  23636193 aagcacttta-agcttcagacgcagttttcttcagatgctt 23636232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 27883857 - 27883903
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  27883857 acttcagaagcactt--tagcttcagacgcagttttcttcagatgcttt 27883903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28169309 - 28169414
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || |  ||||||| |||||||| | ||||||||| |||||  ||||||||||  || ||||| || ||||||||    
T  28169309 tacacttgtactttgtcaactctattaacgcaggacaagtactcagtgttcttcaaatgaccgttgatacctccctttcaattcttcgttcttcttagac 28169408  T
Q  99 gaggtt 104  Q
    ||||||    
T  28169409 gaggtt 28169414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 4404748 - 4404793
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| |||||  |||||||||||||||||||||||||||||||    
T  4404748 acttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 4404793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 4404798 - 4404838
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  4404798 ttcctttgctctccattgttcttccaagacctattgaaatt 4404838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 4457441 - 4457481
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  4457441 ttcctttgctctccattgttcttccaagacctattgaaatt 4457481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 11168000 - 11168040
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  11168000 ttcctttgctctccattgttcttccaagacctattgaaatt 11168040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 11216430 - 11216390
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  11216430 ttcctttgctctccattgttcttccaagacctattgaaatt 11216390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 12237465 - 12237409
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaactt-tgcttctgatgaacttctg 210  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||||    
T  12237465 tgtagcttctggtgatgatatagcttctgatgaccttctgcttctgatgaccttctg 12237409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 12249291 - 12249235
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaactt-tgcttctgatgaacttctg 210  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||||    
T  12249291 tgtagcttctggtgatgatatagcttctgatgaccttctgcttctgatgaccttctg 12249235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 15226739 - 15226694
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||||    
T  15226739 cttcagaagcactt--tagcttcagacgcagttttcttcagatgcttt 15226694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16666134 - 16666030
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| || ||||||| ||||||||| |||||  ||||||||||  || ||||| |||  ||||||    
T  16666134 tacacttgtactttgtcaactctgataacgaaggacaagtacccagtgctcttcaaatgaccgttgatacctccctttcaattcttcgttcttctagacg 16666035  T
Q  100 aggtt 104  Q
    |||||    
T  16666034 aggtt 16666030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 18851400 - 18851360
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  18851400 ttcctttgctctccattgttcttccaagacctattgaaatt 18851360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 38315233 - 38315273
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  38315233 ttcctttgctctccattgttcttccaagacctattgaaatt 38315273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 48337625 - 48337762
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatgc-gtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||| ||||| |||||  ||||| |||||  | ||| |  |  ||||||    
T  48337625 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttatgcttctgatgatgtcatcacttctgatgcacttcag-cttcag 48337723  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     | ||||||| |||||||||||||||||||||||||||||    
T  48337724 gagcacttca-agcttcagacgcagttttcttcagatgct 48337762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 7608083 - 7608039
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||    
T  7608083 cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 7608039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7804525 - 7804438
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcg 87  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||| || |||||    
T  7804525 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttttaattcttcg 7804438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 9391053 - 9390987
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||||| ||||||||||||  |||||||||||||||  |||||||| |||||    
T  9391053 tgtagcttctggtgatgatatcgcttctgatgaaaactttgcttctgatgattttctgcttctgatg 9390987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 13148304 - 13148453
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    ||||||||||||||||| ||| ||| |||||||||| ||  ||| |||||||||| ||||| |||||  | |||  || |||||| ||||||||||||||    
T  13148304 ttgtactttgtcaactc-tcattgaaggacaagcacccaaagctattcaaatgaatcgttgccacctttcctttagtctttcgctttcttagacgaggtt 13148402  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
     | | ||| ||||||||  ||||| | ||||| ||  |||||||||||||||    
T  13148403 gaatccaatagacagct-atttgaaacttcaggttgcatcttctgatcaact 13148453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 17961885 - 17961936
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||||||||   |||||||||||||||||||||||||| | ||||||||    
T  17961885 ttcctttgctcttcattgttcttccaagacctattgaaattaaataactttg 17961936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 20627347 - 20627269
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||| |||||||| |||||| |||||| | | | ||| ||| || |||||||||||||| |||||||||||||||||    
T  20627347 cttcagaagcagttttgttcagacgctttaagcttc-ctttttgttgattcctttgctctctattgttcttccaagacct 20627269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 28169555 - 28169594
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctttaggttact 301  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  28169555 tagcttcagacgcagttttcttcagatgcttcagattact 28169594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 4457292 - 4457365
Alignment:
Q  149 gatcaactgtagcttctg-tgatgatatagcttctgatg--aactttgcttctgatgaacttctgcttttgatg 219  Q
    |||||| ||||||||||| ||||||||| ||||||||||  ||| |||||||||| || ||||||||| |||||    
T  4457292 gatcaaatgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgacgaccttctgcttctgatg 4457365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8774887 - 8774941
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttca 54  Q
    ||||||||||||||||||||||| | |||||| ||||||  ||||||||||||||    
T  8774887 tacacttgtactttgtcaactctattaatgagagacaagtgctcagtgcttttca 8774941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8785472 - 8785526
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttca 54  Q
    ||||||||||||||||||||||| | |||||| ||||||  ||||||||||||||    
T  8785472 tacacttgtactttgtcaactctattaatgagagacaagtgctcagtgcttttca 8785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 9006349 - 9006295
Alignment:
Q  166 gtgatgatatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||||||||||||||| || |||||||||||  ||||||||| |||||    
T  9006349 gtgatgatatagcttctgatgaaattgtgcttctgatggtcttctgcttctgatg 9006295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 9390963 - 9390933
Alignment:
Q  262 tagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||||||||||||||||||||||||    
T  9390963 tagcttcagacgcagttttcttcagatgctt 9390933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 18006790 - 18006840
Alignment:
Q  314 tcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    |||||||||||   |||||||||||||||||||||||||| | ||||||||    
T  18006790 tcctttgctcttcattgttcttccaagacctattgaaattaaataactttg 18006840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 24706313 - 24706268
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||    
T  24706313 cttcagaagcacttta-agcttcagacgcagttttcttcagatgctt 24706268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 28169593 - 28169639
Alignment:
Q  316 ctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    ||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  28169593 ctttgctctccattgttcttccaagacctattgaaattgattgactt 28169639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 39672733 - 39672653
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  39672733 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 39672653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 1783813 - 1783784
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  1783813 agcttcagacgcagttttcttcagatgctt 1783784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 1794225 - 1794196
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  1794225 agcttcagacgcagttttcttcagatgctt 1794196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4457143 - 4457220
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||| | | ||||||| |||||  ||||||||||    
T  4457143 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgttctccaaatgaccgttgatacctcccttt 4457220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8740134 - 8740057
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    |||||||||||||||||||||||   || || ||||||| |||||||| | ||||||||| |||||  ||||||||||    
T  8740134 tacacttgtactttgtcaactctgataacgaaggacaagtactcagtgttcttcaaatgaccgttgatacctcccttt 8740057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 8995642 - 8995589
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||  |||||||||||||||||||||||||| | | ||||||| ||||    
T  8995642 tttgctctccattgttcttccaagacctattgaaattgagtgactttgcatatg 8995589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 9006194 - 9006141
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||  |||||||||||||||||||||||||| | | ||||||| ||||    
T  9006194 tttgctctccattgttcttccaagacctattgaaattgagtgactttgcatatg 9006141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9535836 - 9535913
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  9535836 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 9535913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 9536068 - 9536112
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||    
T  9536068 cttcaggagcacttca-agcttcagacgcagttttcttcagatgct 9536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11164057 - 11164134
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||  ||||||||| |||||  ||||||||||    
T  11164057 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgcacttcaaatgaccgttgatacctcccttt 11164134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 13604737 - 13604766
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  13604737 agcttcagacgcagttttcttcagatgctt 13604766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 15216067 - 15216010
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||| ||||||| ||||| ||| ||||| ||||||    
T  15216067 ttcctttgctctccattgttcttccaatacctatttaaattgattgactttccctatg 15216010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 16348491 - 16348419
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  16348491 atcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 16348419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 17910009 - 17909932
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  17910009 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 17909932  T

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Target: chr3; HSP #132
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 291
Target Start/End: Original strand, 17961759 - 17961879
Alignment:
Q  172 atatagcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatag-cttca 269  Q
    |||| |||||||||||  | |||||||||||  ||||||||| ||||| |||||| | |||| ||||| | || ||||||||| |||| | ||  |||||    
T  17961759 atattgcttctgatgacttctgcttctgatgc-cttctgcttctgatgacgtcatcatttcagaggcacttgatacttcagaagcactccttaatcttca 17961857  T
Q  270 gacgcagttttcttcagatgct 291  Q
    |||| |||||||||||||||||    
T  17961858 gacgtagttttcttcagatgct 17961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #133
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24706561 - 24706484
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  24706561 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 24706484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #134
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 338
Target Start/End: Original strand, 41495265 - 41495337
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttcca 338  Q
    ||||||| ||| || ||||||||||||||| | | | ||| ||| || ||||||||||||||||||||||||||    
T  41495265 cttcagaagcacttctcttcagatgctttaagcttc-ctttttgttgattcctttgctctcttttgttcttcca 41495337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #135
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 46349686 - 46349617
Alignment:
Q  275 agttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||||||| |||||||| | | | ||| ||| || |||||||||||| | |||||||||||||||||    
T  46349686 agttttcttcatatgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacct 46349617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #136
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 47405311 - 47405243
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagac 342  Q
    ||||||||||||||| |||||| | | | ||| ||| || |||||||||||||| |||||||||||||||    
T  47405311 gcagttttcttcagacgctttaagcttc-ctttttgttgattcctttgctctctattgttcttccaagac 47405243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #137
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 1783775 - 1783739
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  1783775 tttgctctccattgttcttccaagacctattgaaatt 1783739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #138
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 1794187 - 1794151
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  1794187 tttgctctccattgttcttccaagacctattgaaatt 1794151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #139
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 7794298 - 7794258
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  7794298 ttcctttgctttccattgttcttccaagacctattgaaatt 7794258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #140
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 7804254 - 7804214
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  7804254 ttcctttgctttccattgttcttccaagacctattgaaatt 7804214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #141
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 291
Target Start/End: Complemental strand, 7804288 - 7804260
Alignment:
Q  263 agcttcagacgcagttttcttcagatgct 291  Q
    |||||||||||||||||||||||||||||    
T  7804288 agcttcagacgcagttttcttcagatgct 7804260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #142
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 9380361 - 9380325
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  9380361 tttgctctccattgttcttccaagacctattgaaatt 9380325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #143
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 9390924 - 9390888
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  9390924 tttgctctccattgttcttccaagacctattgaaatt 9390888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #144
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 14254154 - 14254109
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| |||||  |||||||| ||||||||||||||||||||||    
T  14254154 acttcagaagcactt--tagcttcaaacgcagttttcttcagatgctt 14254109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #145
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 17909710 - 17909670
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| || ||||||||||||||||||||| |||||    
T  17909710 ttcctttgctttcctttgttcttccaagacctattcaaatt 17909670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #146
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 19887058 - 19887022
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  19887058 tttgctctccattgttcttccaagacctattgaaatt 19887022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #147
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 48337768 - 48337808
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  48337768 ttcctttgctttccattgttcttccaagacctattgaaatt 48337808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 24882507 - 24882135
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  24882507 tacacttgtactttgtcaactctttaatgagggacaagcacccattgcttttcaaatgaacgttggcacttcccttttgatcgttcgctctcttagacga 24882408  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata-----------------gcttct 182  Q
    ||||||||| | || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||                 ||||||    
T  24882407 ggttaacttaatgaaacagctcttttgagatttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 24882308  T
Q  183 gatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  24882307 gatgaactttgcttctgatgaacttctgcttctgatgacgtcattacttcaaaggcacttgtaacttcagaaacacttcatagcttcagacgcagttttc 24882208  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||                |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  24882207 ttcagatgcttta----------------ggttcctttgctctctattgttcttccaagacctattgaaattgattaactttgtctatg 24882135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 13682534 - 13682889
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||  || |||||||||| ||||| |||||||||||||||||| ||||||||||| || ||||| ||||||||||||    
T  13682534 tacacttgtactttgtcaactcttcagagaaggacaagcacccagtgattttcaaatgaacgttggtacctcccttttaattcttcgttctcttagacga 13682633  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaacttt-gcttct 198  Q
    ||||||    || | ||||||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  13682634 ggttaaaacgaaaa-acagctcctttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaattttgcttct 13682732  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||||||||||||| | ||| |||||| |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  13682733 gatgaacttctgcttctaatgacgtcatcacttcagaggcacttgaaacttcagaaccacttcatagcttcagacgcagttttcttcagatgcttta--- 13682829  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||    
T  13682830 -------------gattcctttgctctctattgttcttccaagacctactgaaattgattaactttgcctatg 13682889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 26209635 - 26209280
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  26209635 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacga 26209536  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  26209535 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 26209437  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  26209436 gatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 26209340  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  26209339 -------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 26209280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 29590206 - 29590583
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  29590206 tacacttgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaacgttggtacctcccttttaatccttcgttcttttagacga 29590305  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    | ||||    || | ||| ||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  29590306 gattaaaacgaaaa-acaactcctttgaaacttcagtttaaatgtcctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 29590404  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc-tttagg 296  Q
    |||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| ||||||||||||||| | ||||||||||||||||||  ||       
T  29590405 gatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcatagcttcatatgcagttttcttcagatgcagttttc 29590504  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatgctactg 376  Q
    ||    | ||| | | ||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  29590505 ttcagatgcttta-gattcatttgctctctattgttcttccaagacctattgaaattgattaactttgcctatggtactg 29590583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 12734253 - 12733898
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||  || |||||||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  12734253 tacacttgtactttgtcaactcttcagagaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttaaattcttcgttttcttagacga 12734154  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactt-tgcttct 198  Q
    | ||||    || | ||||||| ||||| | ||||| || ||| | |||||||||| |||||| || |||||||||||||||||||| |||| |||||||    
T  12734153 gattaaaacgaaaa-acagctcctttgaaacttcagtttaaatttactgatcaactatagcttatggtgatgatatagcttctgatggacttctgcttct 12734055  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||| |||||||||| ||||| ||||||||||||||||||| | |  ||||||||| ||||||||||||||||||||||||||||| ||||||||||       
T  12734054 gatggacttctgcttctgatgacgtcattacttcaaaggcacttgttacttcagaagcacttcatagcttcagacgcagttttctttagatgcttta--- 12733958  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  12733957 -------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 12733898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 8933733 - 8934089
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || |||||||||| ||||||||||||||||| |||||  ||||||||||| || ||||| |||||||||||    
T  8933733 tacacttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttgatacctcccttttaattcttcgttctcttagacg 8933832  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |    || | |||||||  || | | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  8933833 aggttgaaacgaaaa-acagctccattaaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 8933931  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    ||||| |||||||||| ||||| ||||||||||||| ||||| | || ||||||||| ||||||||||||||||| ||||||||||||||||||||||      
T  8933932 tgatggacttctgcttctgatgacgtcattacttcagaggcacttgagacttcagaagcacttcatagcttcagatgcagttttcttcagatgcttta-- 8934029  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                  | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  8934030 --------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 8934089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 15216530 - 15216885
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||| ||||||||||||||||||| || |||||||||| |||||||| |||||||  |||||  ||||||||||  || ||||| | ||||| ||||    
T  15216530 tacacttttactttgtcaactcttcaaagaaggacaagcacccagtgcttctcaaatggccgttgatacctccctttcaattcttcgttttcttaaacga 15216629  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaacttt-gcttct 198  Q
    | ||||    || | | ||||| ||||| | ||||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  15216630 gattaaaacgaaaa-atagctcctttgaaacttcagtttaaatttactgatcaactgtagcttctggtgatgatatagcttctgatgaaatttcgcttct 15216728  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    |||| |||||||||| | ||| |||||| |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||       
T  15216729 gatggacttctgcttctaatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttcttcagatgcttta--- 15216825  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  15216826 -------------gatttctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 15216885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 3476427 - 3476055
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||  || |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  3476427 tacacttgtactttgtcaactcttcagagaaggacaagcacccagtgcttttcaaatgaacgttggtacctcccttttaatccttcgttcttttagacga 3476328  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctt------ 191  Q
    |  ||   | || | ||||||| ||||| | ||||| || ||| | ||||||||||||||||||| |||||||||||||||||||||||  |||          
T  3476327 gaatataatgaa-aaacagctcctttgaaacttcagtttgaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 3476229  T
Q  192 ----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
              || ||||||||||||||||||| ||||| |||||| |||||| ||||| || |||||||||||| ||| |||||||||||||| ||||||    
T  3476228 gatggacttctggttctgatgaacttctgcttctgatgacgtcatcacttcagaggcactttgaaacttcagaagcac-tcatagcttcagacacagttt 3476130  T
Q  280 tcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||                | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  3476129 tcttcagatgcttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 3476055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 6044298 - 6044003
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| || |||||| |||||||||| |||||  ||||||||||  || ||||| |||||||||||    
T  6044298 tacacttgtactttgtcaactctgataacgaaggacaagtacccagtgcctttcaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 6044199  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactt-tgcttc 197  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||  ||||||||||| |||||||||||||||||||||| || ||||||    
T  6044198 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaaattgtgcttc 6044100  T
Q  198 tgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||||||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  6044099 tgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgcttt 6044003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8999020 - 8998866
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||||||  ||||||||| || |||||||||||||||||||||||||| ||||||  || ||| || ||||||||||    
T  8999020 tacacttgtactttgtcaactcttcaatgaaagacaagcacccaatgcttttcaaatgaacgttggcaccttccttttagtctttcactttcttagacga 8998921  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    |||||| | ||| ||||||||| || |||| ||||| || ||||||||||||||||    
T  8998920 ggttaaatccaatagacagctc-ttagagacttcaggttgaatcttctgatcaact 8998866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 48382359 - 48382731
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || |||||||||| ||||||||||||||||| |||||  || |||||||| || ||||| |||||||||||    
T  48382359 tacacttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttgatacatcccttttaattcttcgttctcttagacg 48382458  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa---------- 188  Q
    ||||| |    || | ||||||| ||||| | ||||| || ||| | |||| ||| ||||||||||| ||||||||||||||||||||||              
T  48382459 aggttgaaacgaaaa-acagctcctttgaaacttcagtttaaatttactgagcaattgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 48382557  T
Q  189 -------ctt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
           ||| |||||||||||||||| ||||| ||||| ||||||||||||| ||||| | |  ||||||||| |||| | ||||||||||| || |||    
T  48382558 tgacggacttctgcttctgatgaacttttgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcactcc-tagcttcagacacaattt 48382656  T
Q  280 tcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||| ||                |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  48382657 tcttcagatgctttagatt----------------cctttgctctccattgttcttccaagacctattgaaattgattaactttgcctatg 48382731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 150 - 293
Target Start/End: Original strand, 19193262 - 19193406
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaac 246  Q
    ||||| ||||||||||| ||||||||| |||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||| | ||| | |  ||    
T  19193262 atcaaatgtagcttctggtgatgatatcgcttctgatgaaattctgcttctgatgaacttctgcttctgatgacgtcattacttcagaagcacttgttac 19193361  T
Q  247 ttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||| || |||||  ||||||||||||||||||||||||||||||||    
T  19193362 ttcataagcactt--tagcttcagacgcagttttcttcagatgcttt 19193406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 13174422 - 13174317
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| ||||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  13174422 cttcagaggcagatttcttcagatgcttgtaggtttctcttcttgatgattccttagctctcttttgttcttccaagacctatt-aaattgattaacttt 13174324  T
Q  364 gcctatg 370  Q
    | |||||    
T  13174323 gtctatg 13174317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 192 - 370
Target Start/End: Original strand, 18419538 - 18419701
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  18419538 tgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgc 18419637  T
Q  291 tttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||                 | |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||    
T  18419638 ttt----------------ggattcctttgctctccattgttcttccaagacctattgaaatttattgactttgcctatg 18419701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 38593822 - 38593528
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctc-ttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||||| ||||||||| |||||  ||||||||||  |  ||||| |||  ||||||    
T  38593822 tacacttgtactttgtcaactctgttaaagaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctttcaaatcttcgttcttattagac 38593723  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatctt-ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgc 194  Q
    |||||| |   |||||  |||||  ||||| || ||  || |||  || ||||| || ||||||||||| ||||||| | ||||||||||||  | ||||    
T  38593722 gaggttgaaa-caagaaccagctactttga-atctccaatataaatttactgattaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgc 38593625  T
Q  195 ttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| ||||||||| ||||| ||||||||||||| | ||| |  ||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  38593624 ttctgatgagcttctgcttctgatgacgtcattacttcagaagcactc-aaacttcagaagcactt--tagcttcagacgcagttttcttcagatgcttt 38593528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 8998750 - 8998667
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  8998750 cttcagatgcagatttcttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 8998667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11087130 - 11086977
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||| |||||||| |||||||||| || ||||||||||| ||||||||| |||| ||||||  || |||| | |||| |||||    
T  11087130 tacacttgtactttgtcaact-ttcaatgaaggacaagcacccaatgcttttcaaacgaacgttggtaccttccttttagtctttcgttttctttgacga 11087032  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    |||| | | ||| ||||||||  ||||| | |||||||| ||||| ||||||||||    
T  11087031 ggttgaatccaatagacagct-gtttgaaacttcagattgaatctcctgatcaact 11086977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 11086876 - 11086771
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| |||||||| |||||| |||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  11086876 cttcagaggcagatttcttcatatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaacttt 11086778  T
Q  364 gcctatg 370  Q
    | |||||    
T  11086777 gtctatg 11086771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 13174685 - 13174537
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtta 105  Q
    |||||||||||||||||| |||||| ||| |||||| || ||||||||||| |||||||||||||| || |||  || ||| || ||||||||||||||     
T  13174685 ttgtactttgtcaactct-caatgaaggagaagcacccaatgcttttcaaacgaacgttggcaccttccctttagtctttctctttcttagacgaggttg 13174587  T
Q  106 acttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    | | ||| ||||||||  ||||||| ||||| || ||||||||||||||||    
T  13174586 aatccaatagacagct-atttgagacttcaggttgaatcttctgatcaact 13174537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 370
Target Start/End: Original strand, 18441619 - 18441782
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||| ||||| ||||| ||||||||||||| | ||| | |  ||||||||| |||||| |||||||||||||||||||||||||||||    
T  18441619 tgcttctgatggacttttgcttctgatgacgtcattacttcagatgcacttgttacttcagaagcacttcttagcttcagacgcagttttcttcagatgc 18441718  T
Q  291 tttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||                 | |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||    
T  18441719 ttt----------------ggattcctttgctctccattgttcttccaagacctattgaaatttattgactttgcctatg 18441782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 9171198 - 9171491
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||  || ||||| || |||||||     
T  9171198 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctccctttcaattcttcgttcctcttagat 9171297  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgct 195  Q
     ||||| |  | | || ||||||  |||||  |||||| || ||| | | ||| || ||||||||||| ||||||||| ||||||||||||  | |||||    
T  9171298 aaggttgaaatga-gaaacagctactttgaattttcagtttgaatttacggattaaatgtagcttctggtgatgatattgcttctgatgaaaaccttgct 9171396  T
Q  196 tctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    |||||||| ||||||||| ||||| |||||| |||||| | ||| |   | |||||| | ||||| | |||||||||||||||||||||||||||||    
T  9171397 tctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcaggagcacttta-agcttcagacgcagttttcttcagatgct 9171491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 31116442 - 31116304
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||||| |||||   | ||||||    
T  31116442 tgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttcaaaagcatt-tcagcttcag 31116344  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |  ||||| | ||||||||||||||||||||||||||||||    
T  31116343 acgcacttta-agcttcagacgcagttttcttcagatgctt 31116304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 1367998 - 1368135
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  1367998 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 1368096  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     | ||||||| |||||||||||||||||||||||||||||    
T  1368097 gagcacttca-agcttcagacgcagttttcttcagatgct 1368135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 18441409 - 18441612
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| || ||||||||| ||||||| |||||  ||||||||||  || ||||| |||||||||||    
T  18441409 tacacttgtactttgtcaactctgataacgaaggacaagtacccagtgctttccaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 18441508  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |   | | | ||| ||| |||||   ||||| || ||| | |||||||  |||||||||| ||||||||||||||||||||||| | |||||||    
T  18441509 aggttga-aacgaaaaacaactcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 18441607  T
Q  198 tgatg 202  Q
    |||||    
T  18441608 tgatg 18441612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 21769874 - 21769737
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||    
T  21769874 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcag 21769776  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
     | ||||||| |||||||||||||||||||||||||||||    
T  21769775 gagcacttca-agcttcagacgcagttttcttcagatgct 21769737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 9170397 - 9170690
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  ||||| |||| | ||||||| |||||  ||||||||||  || ||||| || |||||||     
T  9170397 tacacttgtactttgtcaactctgttaacgaaggacaaatactcantgctatccaaatgaccgttgatacctccctttcaattcttcgttcctcttagat 9170496  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgct 195  Q
     ||||| |  | | || ||||||  |||||  |||||| || ||| | | ||| || ||||||||||| ||||||||| ||||||||||||  | |||||    
T  9170497 aaggttgaaatga-gaaacagctactttgaattttcagtttgaatttacggattaaatgtagcttctggtgatgatattgcttctgatgaaaaccttgct 9170595  T
Q  196 tctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    |||||||| ||||||||| ||||| |||||| |||||| | ||| |   | |||||| | ||||| | |||||||||||||||||||||||||||||    
T  9170596 tctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcaggagcacttta-agcttcagacgcagttttcttcagatgct 9170690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 6043999 - 6043942
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  6043999 ttcctttgctctccattgttcttccaagacctattgaaattaattgactttgcctatg 6043942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 9159942 - 9160235
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  ||||| |||| | ||||||| |||||  ||||||||||  || ||||| || |||||||     
T  9159942 tacacttgtactttgtcaactctgttaacgaaggacaaatactcaatgctatccaaatgaccgttgatacctccctttcaattcttcgttcctcttagat 9160041  T
Q  99 gaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgct 195  Q
     ||||| |  | | || ||||||  |||||  |||||| || ||| | | ||| || ||||||||||| ||||||||| ||||||||||||  | |||||    
T  9160042 aaggttgaaatga-gaaacagctactttgaattttcagtttgaatttacggattaaatgtagcttctggtgatgatattgcttctgatgaaaaccttgct 9160140  T
Q  196 tctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    |||||||| ||||||||| ||||| |||||| |||||| | ||| |   | |||||| | ||||| | |||||||||||||||||||||||||||||    
T  9160141 tctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcaggagcacttta-agcttcagacgcagttttcttcagatgct 9160235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 18419328 - 18419516
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| || ||||||||| ||||||| |||||  ||||||||||  || ||||| |||||||||||    
T  18419328 tacacttgtactttgtcaactctaataacgaaggacaagtacccagtgctttccaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 18419427  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa 188  Q
    ||||| |   | | | ||| ||| |||||   ||||| || ||| | |||||||  |||||||||| |||||||||||||||||||||||    
T  18419428 aggttga-aacgaaaaacaactcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaa 18419516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 19710870 - 19710793
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagac 342  Q
    ||||||| |||| ||| ||||||||||||||| | ||||| ||| || ||| ||||||||||||||||||||||||||    
T  19710870 cttcagaggcagattttttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttcttccaagac 19710793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 25201475 - 25201376
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||||||||| ||||| ||||||||||||| | ||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  25201475 tgcttctgatgagcttctgcttctgatgacgtcattacttcagaagcactccag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 25201379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 3166103 - 3166240
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||||| ||| |  |  ||||||    
T  3166103 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcaaatgcacttcag-cttcag 3166201  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  3166202 aagcactt--tagcttcagacgcagttttcttcagatgctt 3166240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 589621 - 589736
Alignment:
Q  177 gcttctgatgaacttt-gcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| |||| ||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  |||||||| ||||| | ||||||||||||    
T  589621 gcttctgatgaccttttgcttctgatgagcttctgcttctgatgacgtcatcacttcagaagcacttcag-cttcagaagcacttta-agcttcagacgc 589718  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  589719 agttttcttcagatgctt 589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 19193410 - 19193467
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||| ||||| ||| ||||||||||||    
T  19193410 ttcctttgctctccattgttcttccaagacctatttaaattgattgactttgcctatg 19193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 14745589 - 14745520
Alignment:
Q  166 gtgatgatatagcttctgatg--aactttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||||||||||||||  ||| ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  14745589 gtgatgatatagcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttca 14745520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 44280865 - 44281002
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcag 251  Q
    ||||||||||| ||||||  | ||||||||||||  | ||||||||||| | ||||||||| ||||| |||||| |||||| | ||| |  |  ||||||    
T  44280865 tgtagcttctggtgatgacttcgcttctgatgaaaaccttgcttctgattaccttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcag 44280963  T
Q  252 aaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    || |||||  |||||||||||||||||||||||||||||||    
T  44280964 aagcactt--tagcttcagacgcagttttcttcagatgctt 44281002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 38593524 - 38593475
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  38593524 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 38593475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 25201372 - 25201332
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  25201372 ttcctttgctctccattgttcttccaagacctattgaaatt 25201332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 15888260 - 15888194
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||| | ||||||||||||  ||||||||||||||| ||||||||| |||||    
T  15888260 tgtagcttctggtgatgatttcgcttctgatgaaaactttgcttctgatgaccttctgcttctgatg 15888194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 294
Target Start/End: Complemental strand, 48805809 - 48805696
Alignment:
Q  178 cttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgca 275  Q
    |||||||||||||| ||||||||||||||| ||||| ||||| |||||| |||||| | ||| || |   |||||| | ||||||| | |||||||||||    
T  48805809 cttctgatgaactt-gcttctgatgaactt-tgcttctgatgacgtcatcacttcagaagcactttgt--cttcaggagcacttcaaa-cttcagacgca 48805715  T
Q  276 gttttcttcagatgcttta 294  Q
    |||||||||||||||||||    
T  48805714 gttttcttcagatgcttta 48805696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 454730 - 454650
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  454730 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 454650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 467512 - 467432
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  467512 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 467432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 9444229 - 9444309
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  9444229 gtagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 9444309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 20990022 - 20990102
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  20990022 gtagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 20990102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 21002939 - 21002859
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  21002939 gtagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 21002859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 23264522 - 23264442
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  23264522 gtagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 23264442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 589425 - 589502
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  589425 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 589502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1367842 - 1367919
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  1367842 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 1367919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 9261603 - 9261574
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  9261603 agcttcagacgcagttttcttcagatgctt 9261574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 20491466 - 20491495
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  20491466 agcttcagacgcagttttcttcagatgctt 20491495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 21770030 - 21769953
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  21770030 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 21769953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 24244291 - 24244262
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  24244291 agcttcagacgcagttttcttcagatgctt 24244262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 30049996 - 30050025
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  30049996 agcttcagacgcagttttcttcagatgctt 30050025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 40054542 - 40054493
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||| ||  |||||||||||||||||||||||||| ||| ||||    
T  40054542 ttcctttgctttccattgttcttccaagacctattgaaattgattgactt 40054493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 1368141 - 1368181
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  1368141 ttcctttgctttccattgttcttccaagacctattgaaatt 1368181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 9160241 - 9160281
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  9160241 ttcctttgctttccattgttcttccaagacctattgaaatt 9160281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 9170696 - 9170736
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  9170696 ttcctttgctttccattgttcttccaagacctattgaaatt 9170736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 9171497 - 9171537
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  9171497 ttcctttgctttccattgttcttccaagacctattgaaatt 9171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 21769731 - 21769691
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  21769731 ttcctttgctttccattgttcttccaagacctattgaaatt 21769691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 31116295 - 31116259
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||  ||||||||||||||||||||||||||    
T  31116295 tttgctctccattgttcttccaagacctattgaaatt 31116259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 58511 - 58808
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  58511 tacacttgtactttgtcaactcttcaatgaggaacaagcacccagtgcttttcaaatgaacgttggcacttcccttttgatcgttcgctctcttagacga 58610  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| | |||||| |    
T  58611 ggttaacttaaagagacagctcttatgagatttcagattgaatcttctgatcaactgtagcttctggtgatgatatagcatctgatgaaatcttgctttt 58710  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttag 295  Q
    ||||||||||||||| ||||| |||||| |||||| ||||| | | |||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  58711 gatgaacttctgcttctgatgacgtcatcacttcagaggcacttgtaacttcagaagcactttatatcttcagacgcagttttcttcagatgctttag 58808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 58810 - 58867
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||| | |||||||||||||||||||||||| | | ||||||| ||||||    
T  58810 ttcctttgctctttattgttcttccaagacctattgaaaatgaataactttacctatg 58867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 59338 - 58982
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  59338 tacacttgtactttgtcaactcttcaatgaggaaaaagaacccagtgcttttcaaatgaacgttggcactttccttttgatccttcgctctcttagacga 59239  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||| ||    
T  59238 ggttatcttcaagagacagctcttttgagatttcagattgaatcttctgatcaactgtagcttctggtgatggtatagcttctgatgaaatgttgctcct 59139  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggt 297  Q
    ||||||||||||||| ||||| |||||| |||||| ||||| | | |||||||||| ||||||||||||||||||||| ||||||||||||| ||||       
T  59138 gatgaacttctgcttctgatgacgtcataacttcagaggcacttgtaacttcagaagcacttcatagcttcagacgcaattttcttcagatggttta--- 59042  T
Q  298 tactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                 | |||||||||||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  59041 -------------gattcctttgctctctattgttcttccaagacctattgaaattgaataaatttgcctatg 58982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 51 - 370
Target Start/End: Complemental strand, 9899 - 9596
Alignment:
Q  51 ttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaacttcaagagacagctcttttgagatttcagatttaatcttctga 150  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||    
T  9899 ttcaaatgaacgttggcacttcccttttgatccttcgctctcttagacgaggttaacttaaagagacagctcttttaagatttcagatcgaatcttctga 9800  T
Q  151 tcaactgtagcttct-gtgatgatatagcttctgatg-aactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaact 247  Q
    ||||||||||||||| |||||||||||||||| |||| || |||||||||||||||||||||||| ||||| ||||||||||||| ||||| | ||||      
T  9799 tcaactgtagcttctggtgatgatatagcttcggatgaaattttgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgaaa-- 9702  T
Q  248 tcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
                     |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9701 -----------------cttcagacgcagttttcttcagatgctttaggttcctcttcttgatgggtcctttgctctcttttgttcttccaagacctatt 9619  T
Q  348 gaaatttattaactttgcctatg 370  Q
    |||||| ||||||||||||||||    
T  9618 gaaattgattaactttgcctatg 9596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 180; Significance: 4e-97; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 6410 - 6038
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6410 tacacttgtactttgtcaactcttcaatgagggacaagcacccagtgcttttcaaatgaacgttggcacttcccttttgatccttcgctctcttagacga 6311  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata-----------------gcttct 182  Q
    ||||||||| | || |||||  ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||                 ||||||    
T  6310 ggttaacttaatgaaacagcctttttgagatttcagattgaatcttctgatccactgtagcttctggtgatgatatagcttatgatgaaatcttgcttct 6211  T
Q  183 gatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttc 281  Q
    ||| ||||||||||||||||||||| ||||| ||||| |||||| |||||| ||||| | |||||||||||| |||||||||||||||||||||||||||    
T  6210 gattaactttgcttctgatgaacttatgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagttttc 6111  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||                | |||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  6110 ttcagatgcttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgaataactttgcctatg 6038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 22073 - 22404
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||| ||||| |||||   || |||||||||||||||||    
T  22073 tacaattgtactttgtcaactcttcaacaaaggacaagcacccagtgcttttcaaatgaacgttgacaccttcctttgagtctttcgctctcttagacga 22172  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctg 199  Q
    ||||||   ||| | ||||| | ||||| | |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  22173 ggttaaaaccaataaacagc-catttgaaacttcaaattgaatcttctgatcaactgtagcttctggtgatgatatagcttctgatgaagtt-gcttctg 22270  T
Q  200 atgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggtt 298  Q
    |||||||| ||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  22271 atgaactt-tgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagatgctttaggtt 22369  T
Q  299 actcttcttgatggttcctttgctctcttttgttc 333  Q
     |||||||||||| || ||||||||||||||||||    
T  22370 cctcttcttgatgatttctttgctctcttttgttc 22404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 149; Significance: 1e-78; HSPs: 5)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 40391 - 40008
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||  |  || |||||| ||||||||||||||||||||||||||||| |||||   || ||| |||||||||| ||    
T  40391 tacaattgtactttgtcaactcttcaacaaaagataagcacccagtgcttttcaaatgaacgttggcaccttcctttgagtctttcactctcttagatga 40292  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctga--------------- 184  Q
    |||||| | ||| | ||||| | ||||| | |||||||| |||||||||||||||||||||||||| | ||||||||||||||||                   
T  40291 ggttaaatccaataaacagc-catttgaaacttcagattgaatcttctgatcaactgtagcttctggtaatgatatagcttctgacgaagttgcttctga 40193  T
Q  185 tgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttctt 283  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||| | | |||||||||||||||||||    
T  40192 tgaactttgcttctgatgag-ttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcactttaaaacttcagacgcagttttctt 40094  T
Q  284 cagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  40093 cagatgctttaggttcctcttcttgatgatttctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgcctatg 40008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 58937 - 58735
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||  |  || |||||| ||||||||||||||||||||||||||||| | |||   || |||||||||||||||||    
T  58937 tacaattgtactttgtcaactcttcaacaaaagataagcacccagtgcttttcaaatgaacgttggcaccttcgtttgagtctttcgctctcttagacga 58838  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaactttgcttctg 199  Q
    |||||| | ||| | ||||| | ||||| | |||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||     
T  58837 ggttaaatccaataaacagc-catttgaaacttcagattgaatcttctgatcaactgtagcttctggtgacgatatagcttctgatgaactttgcttcta 58739  T
Q  200 atga 203  Q
    ||||    
T  58738 atga 58735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 180656 - 180759
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||||| || |  ||||||||| |||||| | ||||||||||||||||||||||||||    
T  180656 tgcttctgatgaacttctgcttctgatgacgtcatttcttcagaggcactttgttacttcagaagcacttcttggcttcagacgcagttttcttcagatg 180755  T
Q  290 cttt 293  Q
    ||||    
T  180756 cttt 180759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 175744 - 175847
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||||| || |  |||| |||| |||||| | |||||||| |||||||||||||||||    
T  175744 tgcttctgatgaacttctgcttctgatgacgtcatttcttcagaggcactttgttactttagaagcacttcttggcttcagatgcagttttcttcagatg 175843  T
Q  290 cttt 293  Q
    ||||    
T  175844 cttt 175847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 175855 - 175908
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||  |||||||||||||||||||||||||| | | ||||||| ||||    
T  175855 tttgctctccattgttcttccaagacctattgaaattgaatgactttgcatatg 175908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 138; Significance: 5e-72; HSPs: 4)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 29685 - 29997
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||||||||||||||||||| | ||||||  ||||||||||||| |||||||| ||| | ||||||||||||||| ||||||||||||    
T  29685 tacacttgtactttgtcaactcttcaatgaggtaaaagcaccaagtgcttttcaaacgaacgttgacactttccttttgatccttcggtctcttagacga 29784  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact--------- 190  Q
    ||||  | | |||   ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| |             
T  29785 ggttgtcataaagtatcagctcttttgagatttcagattgaatattctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 29884  T
Q  191 ---------ttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
             ||||||||||||||||||||||| ||||| |||||| |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||    
T  29885 gatgaacttttgcttctgatgaacttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagtttt 29984  T
Q  281 cttcagatgcttt 293  Q
    |||||||||||||    
T  29985 cttcagatgcttt 29997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 29996 - 30049
Alignment:
Q  317 tttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  29996 tttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 30049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 36634 - 36535
Alignment:
Q  191 ttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatg 289  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  |||||||| ||||| | |||||||||||||||||||||||||||    
T  36634 ttgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcacttcag-cttcagaagcacttta-agcttcagacgcagttttcttcagatg 36537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 36529 - 36489
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  36529 ttcctttgctttccattgttcttccaagacctattgaaatt 36489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 35747 - 36119
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  35747 tacacttgtactttgtcaactcttcaaagaaggacaagcacccagtgcttttcaaatgaacgttggtacctcccttttaatccttcgttctcttagacga 35846  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctt------ 191  Q
    || ||   | || | ||||||| ||||| ||||||| || ||| | ||||||||||||||||||| |||||||||||||||||||||||  |||          
T  35847 ggatataatgaa-aaacagctcctttgaaatttcagtttgaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttct 35945  T
Q  192 ----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
              |||||||||||||||||||||| ||||| | |||| |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||    
T  35946 gatggacttctgcttctgatgaacttctgcttctgatgacatcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagacgcagtttt 36045  T
Q  281 cttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||                | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  36046 cttcagatgcttta----------------gattcctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 36119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 128; Significance: 4e-66; HSPs: 5)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 7696 - 7311
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||  | ||| |||||| ||||||||||||||||||||||||||||| |||||   || |||||| |||||||| |    
T  7696 tacaattgtactttgtcaactcttcaacaaaggataagcacccagtgcttttcaaatgaacgttggcaccttcctttgagtctttcgctttcttagacaa 7597  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctg 199  Q
    |||||| | ||| | ||| | | ||||| | |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| || |||||||    
T  7596 ggttaaatccaataaacaac-catttgaaacttcagattgaatcttctgatcaactgtagcttctgatgacgatatagcttctgatgaagtt-gcttctg 7499  T
Q  200 atgaacttc---------------tgcttttgatgc-gtcattacttcaaaggcattagaaacttcagaaacacttcatag--cttcagacgcagttttc 281  Q
    ||||||||                ||||| |||||  |||||||||||| ||||| | |||||||||||| ||||||| |   |||||||||||||||||    
T  7498 atgaactttgcttctgatgagttttgcttctgatgatgtcattacttcagaggcacttgaaacttcagaagcacttcaaaagacttcagacgcagttttc 7399  T
Q  282 ttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||| ||||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  7398 ttcaaatgctttaggttcttcttcttgatgatttctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgcctatg 7311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 127856 - 128210
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||| ||||| |||||||||| |||||||||| |||||||||| |||||| |||||  ||||||||||| ||  |||| |||||||||| |    
T  127856 tacacttgtacttagtcaaatcttcaatgaaggacaagcacccagtgctttttaaatgaccgttgatacctcccttttaattattcgttctcttagacaa 127955  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttct 198  Q
    |||| |    || ||||| ||| ||||| | ||||| ||  || | |||||||| ||||||||||| |||||||||||||||||||||| | ||||||||    
T  127956 ggttgaaacgaa-agacacctcctttgaaacttcagtttagatttactgatcaattgtagcttctggtgatgatatagcttctgatgaaatattgcttct 128054  T
Q  199 gatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttagg 296  Q
    ||||||||||||||| ||||| |||||| |||||| ||||| || ||   ||||||| |||||  |||||||||||||||||||||||||||||||||      
T  128055 gatgaacttctgcttctgatgacgtcatcacttcagaggcactttgagggttcagaagcactt--tagcttcagacgcagttttcttcagatgcttta-- 128150  T
Q  297 ttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
                  | || ||||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  128151 --------------gctttctttgctctctattgttcttccaagacctattgaaattgattaactttgactatg 128210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 141015 - 141234
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||||||||||||||| |||| |||||||| |||||| ||| |||||||||| ||||||  ||||  ||||||||||| || ||||| |||||||||| |    
T  141015 tacacttgtactttgtaaacttttcaatgaaggacaaacacccagtgctttttaaatgactgttgatacctcccttttaattcttcgttctcttagacaa 141114  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttct 198  Q
    | |  |    || ||||| ||| ||||| | ||||| ||  || | |||||||| ||||| |||| ||||||||||||||||||||||| | ||||||||    
T  141115 gatggaaaggaa-agacaactcctttgaaacttcagtttagatttactgatcaattgtagtttctagtgatgatatagcttctgatgaaatattgcttct 141213  T
Q  199 gatgaacttctgcttttgatg 219  Q
    |||| |||||||||| |||||    
T  141214 gatggacttctgcttctgatg 141234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 370
Target Start/End: Original strand, 141203 - 141386
Alignment:
Q  172 atatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttc 268  Q
    |||| |||||||||| |||| |||||||||||||||||||||| ||||| |||||| |||||| ||||| || ||   ||||||| ||||| |  |||||    
T  141203 atattgcttctgatggacttctgcttctgatgaacttctgcttctgatgacgtcatcacttcacaggcactttgagggttcagaagcacttga--gcttc 141300  T
Q  269 agacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgccta 368  Q
    ||||||||||||||||||||||||||| || ||                ||||||||| |||||||||||||||||||||||||| |||||||||| |||    
T  141301 agacgcagttttcttcagatgctttagctttct----------------ttgctctctattgttcttccaagacctattgaaattgattaactttgacta 141384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 215292 - 215224
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaaga 341  Q
    ||||||||||||||| |||||| | | | ||| ||| || |||||||||||| | ||||||||||||||    
T  215292 gcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaaga 215224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 9335 - 9712
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtta 105  Q
    |||||||||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||| || |||  || |||||| ||||||| ||||||     
T  9335 ttgtactttgtcaactct-caatgaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccatttagtctttcgctttcttagatgaggttg 9433  T
Q  106 acttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatgaa 204  Q
    | | ||| | |||||| ||| || | ||||| |  ||||| || ||||||||||||||||| |||||||||||||||||||||| || ||||||||||||    
T  9434 aatccaataaacagctattt-gaaacttcaggtagaatctactaatcaactgtagcttctggtgatgatatagcttctgatgaagtt-gcttctgatgaa 9531  T
Q  205 ctt---------------ctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagat 288  Q
    |||               |||||| ||||| ||||||  | ||| ||||| | |||||||||||| ||||||| | |||||||| |||||||||||||||    
T  9532 ctttgcttctggtgagttctgcttctgatgacgtcatctcatcagaggcacttgaaacttcagaagcacttcaaaacttcagacacagttttcttcagat 9631  T
Q  289 gctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||    
T  9632 gctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgtctatg 9712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 17878 - 17501
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtta 105  Q
    |||||||||||||||||| |||||| |||||||||| || |||||||||||||||||||||||||| ||||||  || |||||| ||||||| ||||||     
T  17878 ttgtactttgtcaactct-caatgaaggacaagcacccaatgcttttcaaatgaacgttggcaccttccttttagtctttcgctttcttagatgaggttg 17780  T
Q  106 acttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatgaa 204  Q
    | | ||| | ||| || ||| || | ||||| |  ||||| || ||||||||||||||||| ||||||||| |||| ||||||| || ||||||||||||    
T  17779 aatccaataaacaactattt-gaaacttcaggtagaatctactaatcaactgtagcttctggtgatgatattgcttatgatgaagtt-gcttctgatgaa 17682  T
Q  205 ctt---------------ctgcttttgatgc-gtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagat 288  Q
    |||               |||||| |||||  |||||  ||||| ||||| | |||||||||||| ||||||| | ||||||||||||||||||||||||    
T  17681 ctttgcttctggtgagttctgcttctgatgatgtcatctcttcagaggcacttgaaacttcagaagcacttcaaaacttcagacgcagttttcttcagat 17582  T
Q  289 gctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||    
T  17581 gctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt-aaattgatcaactttgtctatg 17501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 12871 - 12498
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| | ||||||||||    
T  12871 tacacttgtactttgtcaactcttcaaagagggacaagcacccagtgcttttcaaatgaacgttggtacctcccttttaatccttcgttttcttagacga 12772  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagat-ttaatcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaa--ctt----- 191  Q
    | ||||   | | | ||||||| ||||| | ||||| |   ||| | ||||||||||||||||||| |||||||||||||||||||||||  |||         
T  12771 gattaa-aacgaaaaacagctcctttgaaacttcagttcaaaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 12673  T
Q  192 -----------tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
               ||||||||||| |||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| |||| ||| ||||||||||||||||    
T  12672 tgatggatttctgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaaccactccatcgcttcagacgcagttt 12573  T
Q  280 tcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||  ||               |||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||    
T  12572 tcttcagatgcttt--gt--------------cttcctttgctctatattgttcttccaagacctattgaaattgattaactttgcctatg 12498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 2204 - 2575
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||||||||||||||||||| || ||| | |||| |||||||||||||||||||||||| ||||||||||| ||||| || | ||| ||||||    
T  2204 tacacttgtactttgtcaactcttcaaagaaggaaaggcacccagtgcttttcaaatgaacgttggtacctcccttttaatcctacgttttctcagacga 2303  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttct-gtgatgatata-----------------gcttct 182  Q
    ||||||   | | | ||||||| ||||| | ||||| || ||| | ||||||||||||||||||| |||||||||||                 ||||||    
T  2304 ggttaa-aacgaaaaacagctcctttgaaacttcagtttgaatatactgatcaactgtagcttctggtgatgatatagcttatgaggaaatactgcttct 2402  T
Q  183 gatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagtttt 280  Q
    |||| |||| |||||||||||| ||||||||| ||||| |||||| |||||| ||||| | |||||||||||| ||| |||||||||||||||||| |||    
T  2403 gatggacttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttgaaacttcagaagcac-tcatagcttcagacgcagcttt 2501  T
Q  281 cttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||                | |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  2502 cttcagatgcttta----------------gattcctttgttctctattgttcttccaagacctattgaaattgattaactttgcctatg 2575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 370
Target Start/End: Original strand, 69840 - 70179
Alignment:
Q  34 acaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaacttcaagagacagctcttttgagattt 133  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||| |||||||| ||||| |||||||||||     || | ||||||| ||||| | ||    
T  69840 acaagcacccagtgctttttaaatgaacgttggtacctcccttttaatccttcgttctctcagacgaggttataacgaaaa-acagctcctttgaaactt 69938  T
Q  134 cagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatg------------ 219  Q
    ||| || ||| | |||||||||||||||||||| |||||||||||||||||||||| | |||||||||||| |||||||||| |||||                
T  69939 cagtttgaatatactgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatggacttctgcttctgatgaacttttgcttc 70038  T
Q  220 ------cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggt 313  Q
          ||||||||||||| ||||| | |  ||||||||| ||||| |||||||||||||||||||||||||||||||||                 |||    
T  70039 taattacgtcattacttcagaggcacttgttacttcagaaccactttatagcttcagacgcagttttcttcagatgcttt----------------gggt 70122  T
Q  314 tcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  70123 tcctttgctctctattgttcttccaagacctattgaaatttattaactttgcctatg 70179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 43 - 370
Target Start/End: Original strand, 15119 - 15449
Alignment:
Q  43 cagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaacttcaagagacagctcttttgagatttcagatttaa 142  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||  | || | ||||||| ||||| | ||||| || ||    
T  15119 cagtggttttcaaatgaacgttggtacctcccttttaatccttcgttctcttaaacgaggttaaaatgaa-aaacagctcctttgaaacttcagtttaaa 15217  T
Q  143 tcttctgatcaactgtagcttct-gtgatgatatagcttctgatgaact-ttgcttctgatgaacttctgcttttgatg------------------cgt 222  Q
    | | ||||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||| |||||||||| |||||                  |||    
T  15218 tatactgatcaactgtagcttctggtgatgatacagcttctgatgaaatcttgcttctgatggacttctgcttctgatgaacttctgcttctaatgacgt 15317  T
Q  223 cattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgct 322  Q
    ||| |||||| ||||| | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||                |||||||    
T  15318 catcacttcagaggcacttgaaacttcagaagcacttcatagcttcagaagcagttttcttcagatgctttagatta----------------ctttgct 15401  T
Q  323 ctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  15402 ctctattgttcttccaagaactattgaaattgattaactttgcctatg 15449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 90; Significance: 2e-43; HSPs: 5)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5505 - 5800
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||  || |||||||||||||  || |||||  | ||||||||  || ||||| |||||||||||    
T  5505 tacacttgtactttgtcaactctgataacgaaggacaattacccagtgcttttcaaccgaccgttgatatctccctttcaattcttcgttctcttagacg 5604  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatctt-ctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgctt 196  Q
    ||||| |    || | ||||||| |||||   ||||| |||||| || |||||||  ||||||||||| |||||||||||||||||||||| | ||||||    
T  5605 aggttgaaacgaaaa-acagctcctttgaatcttcag-tttaattttactgatcacttgtagcttctggtgatgatatagcttctgatgaaatcttgctt 5702  T
Q  197 ctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    |||||| |||||||||| ||||| ||||||||||||| ||||| | |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  5703 ctgatggacttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcttagcttcagacgcagttttcttcagatgcttt 5800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 13110 - 13212
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  13110 tgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcacttcttagcttcagacgcagttttcttcagatgc 13209  T
Q  291 ttt 293  Q
    |||    
T  13210 ttt 13212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 5804 - 5861
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  5804 ttcctttgctctccattgttcttccaagacctattgaaattgattgactttgcctatg 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 13216 - 13273
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  13216 ttcctttgctctccattgttcttccaagacctattgaaattgattgactttgcctatg 13273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 12900 - 13088
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||  || |||||||||||||  || |||||  | ||||||||  || ||||| |||||||||||    
T  12900 tacacttgtactttgtcaactctgataacgaaggacaattacccagtgcttttcaaccgaccgttgatatctccctttcaattcttcgttctcttagacg 12999  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatctt-ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa 188  Q
    ||||| |    || | ||||||| |||||   ||||| |||||| || |||||||  ||||||||||| ||||||||||||||||||||||    
T  13000 aggttgaaacgaaaa-acagctcctttgaatcttcag-tttaattttactgatcacttgtagcttctggtgatgatatagcttctgatgaa 13088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 46 - 370
Target Start/End: Original strand, 1 - 328
Alignment:
Q  46 tgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggttaacttcaagagacagctcttttgagatttcagatttaatct 145  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||     || | ||||||| ||||| | ||||| || ||| |    
T  1 tgcttttcaaatgaacgttggtacctcccttttaatccttcgttctcttagacgaggatataacgaaaa-acagctcctttgaaacttcagtttgaatat 99  T
Q  146 tctgatcaactgtagcttctg-tgatgatatagcttctgatgaa-----------------ctt-tgcttctgatgaacttctgcttttgatgc-gtcat 225  Q
     |||||||||||||||||||| ||||||||||||||||||||||                 ||| |||||||||||||||||||||| |||||  |||||    
T  100 actgatcaactgtagcttctggtgatgatatagcttctgatgaaatattgcttctgatggacttctgcttctgatgaacttctgcttctgatgatgtcat 199  T
Q  226 tacttcaaaggcattagaaacttcagaaacacttcatag-cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctct 324  Q
     |||||| ||||| | |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||                | ||||||||||||    
T  200 cacttcagaggcacttgaaacttcagaagcact-cataggcttcagacgcagttttcttcagatgcttta----------------gattcctttgctct 282  T
Q  325 cttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    || |||||||||||||||||||||||||| ||||||||||||||||    
T  283 ctattgttcttccaagacctattgaaattgattaactttgcctatg 328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 177 - 370
Target Start/End: Original strand, 163529 - 163708
Alignment:
Q  177 gcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgca 275  Q
    |||||||||||||||||||||||||| |||||||||| ||||| |||||||| |||| ||||| | |||||||||||| ||||||||||||||||||| |    
T  163529 gcttctgatgaactttgcttctgatggacttctgcttctgatgacgtcattatttcagaggcacttgaaacttcagaagcacttcatagcttcagacgta 163628  T
Q  276 gttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttctt-ccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||||||  ||                |||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  163629 gttttcttcagatgctttaaatt----------------cctttgctctctattgttctttccaagacctattgaaattgattaactttgcctatg 163708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 163481 - 163647
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatata-----------------gcttctgatgaactttgcttctgatgaacttctgcttttgatg-cgtcatta 227  Q
    |||||||||||||||||||| ||||||||||                 |||||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  163481 ctgatcaactgtagcttctggtgatgatatagcttctgatgaaatcttgcttctgatgaactttgcttctgatggacttctgcttctgatgacgtcatta 163580  T
Q  228 cttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgcttta 294  Q
     |||| ||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  163581 tttcagaggcacttgaaacttcagaagcacttcatagcttcagacgtagttttcttcagatgcttta 163647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28842 - 28749
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctctt 94  Q
    |||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28842 tacacttgtactttgtcaactcttcactgagagacaagcacccagtgcttttcaaatgaacgttggcacttcccttttgatccttcgctctctt 28749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 76; Significance: 5e-35; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 61254 - 61408
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||  || ||||||| |||| ||||    
T  61254 tacaattgtactttgtcaactcttcaatgaaggacaagcacccagtgcttttctaatgaacgttggcaccttccttttagtctttcgctcccttaaacga 61353  T
Q  101 ggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    |||||| | ||| ||||||||| || |||  ||||| || ||||||||||||||||    
T  61354 ggttaaatccaatagacagctc-ttagagtcttcaggttgaatcttctgatcaact 61408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 370
Target Start/End: Original strand, 61522 - 61614
Alignment:
Q  278 tttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||| |||||| ||||||  | || |||||||||||||||||||| ||| |||||||||| ||||| || ||||||| |||||    
T  61522 tttcttcagatgcttctaggtttctcttcacgttgattcctttgctctcttttgtttttctaagacctatt-aaattgatcaactttgtctatg 61614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 3898 - 3938
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  3898 ttcctttgctctacattgttcttccaagacctattgaaatt 3938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 177 - 370
Target Start/End: Original strand, 6943 - 7122
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    |||||||||| |||| |||||||||||||||||||||| || || |||||| |||||| ||||| | |||||||||||| ||||||||||||||||| ||    
T  6943 gcttctgatggacttctgcttctgatgaacttctgcttctgttgacgtcatcacttcagaggcacttgaaacttcagaagcacttcatagcttcagatgc 7042  T
Q  275 agttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    ||||||||||||||||||||                | || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  7043 agttttcttcagatgcttta----------------gatttctttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 7122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15939 - 16039
Alignment:
Q  1 tacacttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacga 100  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||||  ||||||||||  || ||||| | ||||||||||    
T  15939 tacacttgtaccttgtcaactcttcaatgaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttttcttagacga 16038  T
Q  101 g 101  Q
    |    
T  16039 g 16039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 12162 - 11850
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || ||||||| || ||||||||||||||||| |||||  ||||||||||  || ||||| |||||||||||    
T  12162 tacacttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaatgaccgttgatacctccctttcaattcttcgttctcttagacg 12063  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa---------- 188  Q
    ||||| |    || | ||||||| |||||   ||||| || ||| | |||||||  ||||||||||| ||||||||||||||||||||||              
T  12062 aggttgaaacgaaaa-acagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagcttctgatgaaatcttgcttc 11964  T
Q  189 -------ctt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
           ||| |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |  ||||||||| |||||| ||||||||||||||||||    
T  11963 tgatggtcttctgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgttacttcagaagcacttcttagcttcagacgcagttt 11864  T
Q  280 tcttcagatgcttt 293  Q
    ||||||||||||||    
T  11863 tcttcagatgcttt 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 15783 - 15681
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||||||||| | ||| ||||||||||||| ||||| | |  |||| |||| |||||| |||||||||||||||||||||||||||||    
T  15783 tgcttctgatggacttctgcttcttatgacgtcattacttcataggcacttggtacttaagaagcacttcttagcttcagacgcagttttcttcagatgc 15684  T
Q  291 ttt 293  Q
    |||    
T  15683 ttt 15681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 11846 - 11789
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  11846 ttcctttgctctccattgttcttccaagacctattgaaattgattgactttgcctatg 11789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 15677 - 15620
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| | | ||||| ||||||    
T  15677 ttcctttgctctccattgttcttccaagacctattgaaattgaatgactttacctatg 15620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 10124 - 10022
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||| | |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  10124 tgcttctgatggacttctgcttctgatgacgtcattacttcagaggcacttgaaacttcagaagcactttatagcttcagacgcagttttcttcagatgc 10025  T
Q  291 ttt 293  Q
    |||    
T  10024 ttt 10022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 10018 - 9961
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  10018 ttcctttgctctccattgttcttccaagacctattgaaattgattgactttgcctatg 9961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 10334 - 10146
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||| ||||||||||||||||||   || || ||||||| || |||||||||||||| || |||||  ||||||||||  || ||||| ||||||| |||    
T  10334 tacatttgtactttgtcaactctgataacgaaggacaagtacccagtgcttttcaaacgaccgttgatacctccctttcaattcttcgttctcttatacg 10235  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa 188  Q
    ||||| |   ||| | ||||||| |||||   ||||| || ||| | |||||||  ||||||||||| ||||||||||| ||||||||||    
T  10234 aggttgaga-caaaaaacagctcctttgaatcttcagtttaaatttactgatcacttgtagcttctggtgatgatatagtttctgatgaa 10146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 7440 - 7812
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacg 99  Q
    |||||||||||||||||||||||   || || |||||||||| ||||||||||||||||| |||||  ||||||||||  ||  |||| ||||||||||     
T  7440 tacacttgtactttgtcaactctgataaagaaggacaagcacccagtgcttttcaaatgaccgttgatacctccctttcaatttttcgttctcttagaca 7539  T
Q  100 aggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaact-ttgcttc 197  Q
    ||||| |    || ||||||||| ||||| | ||||| ||  || | |||||||| ||||||||||| |||||||||||||||||||||| | |||||||    
T  7540 aggttgaaacgaa-agacagctcctttgaaacttcagtttagatttactgatcaattgtagcttctggtgatgatatagcttctgatgaaatattgcttc 7638  T
Q  198 tgatgaacttctgcttttgatg------------------cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttt 279  Q
    ||||| |||||||||| |||||                  |||||| |||||| ||||| | |  | ||||||| |||||  ||||||||||||||||||    
T  7639 tgatggacttctgcttctgatgatcttctgcttctaatgacgtcatcacttcagaggcacttgttagttcagaagcactt--tagcttcagacgcagttt 7736  T
Q  280 tcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||||| |               ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  7737 tcttcagatgctttagct---------------ttcttttgctctctattgttcttccaagacctattgaaattgattaactttgcctatg 7812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 7197 - 7246
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  ||||||||||||||||| |||||||| ||| ||||    
T  7197 ttcctttgctctccattgttcttccaagaccttttgaaattaatttactt 7246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 3e-27; HSPs: 7)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 156433 - 156351
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  156433 cttcagaggcagatttcttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 156351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 481593 - 481488
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||| | || |||||||||||||||||||||||||||||||| || ||||| |||||||||    
T  481593 cttcagaggcagatttcttcagatgcttctaggtttctcttctcgttgattcctttgctctcttttgttcttccaagacct-tttaaattgattaacttt 481495  T
Q  364 gcctatg 370  Q
    | |||||    
T  481494 gtctatg 481488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 481842 - 481693
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaac-gttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||| || |||||||||||||| || ||||||||||||||||  ||| |||||  | |||  || |||||| ||||||||||||||    
T  481842 ttgtactttgtcaactct-cattgagggacaagcacccaatgcttttcaaatgaacttttgccacctttcctttagtctttcgctttcttagacgaggtt 481744  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
     | | ||| ||||||||  ||||| | ||||| || ||||||||||| ||||    
T  481743 gaatccaatagacagct-atttgaaacttcaggttgaatcttctgattaact 481693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 117308 - 117413
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||||| ||||||||| |||||  || |||||||  || ||||| || ||||||||    
T  117308 tacacttgtactttgtcaactctgttaacgaaggacaagtactcagtgctcttcaaatgaccgttgatacatccctttcaattcttcgttcttcttagac 117407  T
Q  99 gaggtt 104  Q
    ||||||    
T  117408 gaggtt 117413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 117623 - 117663
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  117623 ttcctttgctctctattgttcttccaagacctattgaaatt 117663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 156698 - 156549
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaa-cgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    |||||||||||||||||| || ||| |||||||||| ||  ||| |||||||||| ||||| |||||  | |||  || |||||| ||||||||||||||    
T  156698 ttgtactttgtcaactct-cattgaaggacaagcacccaaagctattcaaatgaatcgttgccacctttcctttagtctttcgctttcttagacgaggtt 156600  T
Q  105 aacttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
     | | ||| ||||||||  ||||| | ||||| ||  |||||||||||||||    
T  156599 gaatccaatagacagct-atttgaaacttcaggttgcatcttctgatcaact 156549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 117455 - 117530
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    |||||||| |||| |||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  117455 ctgatcaaatgtaacttctggtgatgattttgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 117530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 5421 - 5503
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctatt 347  Q
    ||||||| |||| | ||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  5421 cttcagaggcagatatcttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttccaagacctatt 5503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 5156 - 5254
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatga-acgttggcacctcccttttgatccttcgctctcttagacgaggtt 104  Q
    ||||||||||||||| || || ||| |||||||||| || ||||||||||||||  ||||| ||||| || |||  || |||||| ||||||||||||||    
T  5156 ttgtactttgtcaacact-cattgaaggacaagcacccaatgcttttcaaatgagtcgttgccaccttccctttagtctttcgctttcttagacgaggtt 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 56617 - 56515
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||||||||||||| ||||| ||||||||||||| ||||| | |||||||||  | |||||| |||||| ||||||||||||||||||||||    
T  56617 tgcttctgatgaacttctgcttctgatgacgtcattacttcagaggcacttgaaacttcaagagcacttcttagcttgagacgcagttttcttcagatgc 56518  T
Q  291 ttt 293  Q
    |||    
T  56517 ttt 56515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 56511 - 56472
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaat 352  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  56511 ttcctttgctctccattgttcttccaagacctattgaaat 56472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 6318 - 6214
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||||||||||||| || || || |||||||    
T  6318 cttcagaagcagatttcttcagatgctttaggtttctctt-ttgttgattcctttgctctcttttgttcttccaagacctattaaatttgatcaactttg 6220  T
Q  365 cctatg 370  Q
     |||||    
T  6219 tctatg 6214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 731 - 626
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||| || |||||||||||||||||||| || ||||||||||| || || || |||||||    
T  731 cttcagaggcagatttcttcagatgctttaggtttctctttttgttgattcctttgctctcttttgtttttacaagacctattaaatttgatcaactttg 632  T
Q  365 cctatg 370  Q
     |||||    
T  631 tctatg 626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 370
Target Start/End: Complemental strand, 924 - 819
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaactttg 364  Q
    ||||||| |||| ||||||||||||||||||||| ||||| ||| || |||||||||||||||||||| || ||||||||||| || || || |||||||    
T  924 cttcagaggcagatttcttcagatgctttaggtttctctttttgttgattcctttgctctcttttgtttttacaagacctattaaatttgatcaactttg 825  T
Q  365 cctatg 370  Q
     |||||    
T  824 tctatg 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 12021 - 12117
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagac 342  Q
    |||||| | ||||||| | |||||||||||||||||||||||||||||||| | ||||| ||| || ||||||| ||||||||||||||||| ||||    
T  12021 cttcaggagcacttcaaaacttcagacgcagttttcttcagatgctttaggcttctctttttgttgattcctttcctctcttttgttcttccgagac 12117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 61771 - 61919
Alignment:
Q  6 ttgtactttgtcaactcttcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctcttagacgaggtta 105  Q
    |||||||||||||||||| |||||| |||||||||| || |||||||||||  ||||||||||||| || |||  |  |||||| ||||||| ||||||     
T  61771 ttgtactttgtcaactct-caatgaaggacaagcacccaatgcttttcaaacaaacgttggcaccttccctttagtatttcgctttcttagatgaggttg 61869  T
Q  106 acttcaagagacagctcttttgagatttcagatttaatcttctgatcaact 156  Q
    | | ||| ||||||||  ||||| | |||||||| ||||||||||||||||    
T  61870 aatccaatagacagct-atttgaaacttcagattgaatcttctgatcaact 61919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 62019 - 62124
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||  ||||||||||||||| |||||| ||||||||| || |||||| |||||||||||||||||||||||||||| ||||| || ||||||    
T  62019 cttcagaggcatatttcttcagatgcttctaggtttctcttcttgttgattccttagctctcttttgttcttccaagacctatt-aaattgatcaacttt 62117  T
Q  364 gcctatg 370  Q
    | |||||    
T  62118 gtctatg 62124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 370
Target Start/End: Original strand, 117580 - 117685
Alignment:
Q  265 cttcagacgcagttttcttcagatgctt-taggttactcttcttgatggttcctttgctctcttttgttcttccaagacctattgaaatttattaacttt 363  Q
    ||||||| |||| ||||||||||||||| |||||| ||||||||| || || ||| |||||||||||||||||||||||||||| ||||| || ||||||    
T  117580 cttcagaggcagatttcttcagatgcttctaggtttctcttcttgttgatttcttagctctcttttgttcttccaagacctatt-aaattgatgaacttt 117678  T
Q  364 gcctatg 370  Q
    | |||||    
T  117679 gtctatg 117685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 7600 - 7679
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||| |||| ||||||||||||||||||| | ||||| ||| || ||||||||||||||||| ||||||||||||||    
T  7600 cttcagaggcagatttcttcagatgctttaggcttctctttttgttgattcctttgctctctttttttcttccaagacct 7679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 3682 - 3611
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    |||| ||||||| ||||||||||| | ||||| ||| || ||||||||||||||||||||||||||||||||    
T  3682 gcagatttcttcggatgctttaggcttctctttttgttgattcctttgctctcttttgttcttccaagacct 3611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 53400 - 53481
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  53400 tgtagcttctggtgatgatatagcttctgatgaaaaactttgcttctgatgaacttctgcttctgatgacgtcatcacttca 53481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 344
Target Start/End: Original strand, 35512 - 35575
Alignment:
Q  281 cttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    |||||||||||||||| | ||||| ||| || ||||||||||||||||||||||||||||||||    
T  35512 cttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttccaagacct 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 2825 - 2768
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactttgcctatg 370  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||||||||||    
T  2825 ttcctttgctctccattgttcttccaagacctattgaaattgattgactttgcctatg 2768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 2877 - 2829
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgcttt 293  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  2877 acttcagaagcacttcttagcttcagacgcagttttcttcagatgcttt 2829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 19068 - 18952
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||| ||| ||||||||| ||||| ||||||||||||| | ||| |  |  |||||||| |||||  |||||||||||||    
T  19068 gcttctgatgaccttctgcttctggtgagcttctgcttctgatgacgtcattacttcagaagcacttcag-cttcagaagcactt--tagcttcagacgc 18972  T
Q  275 agttttcttcagatgcttta 294  Q
    ||||||||||||||||||||    
T  18971 agttttcttcagatgcttta 18952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 28462 - 28346
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| |||||||| ||| ||||||||| ||||| ||||||||||||| | ||| |  |  |||||||| |||||  |||||||||||||    
T  28462 gcttctgatgaccttctgcttctggtgagcttctgcttctgatgacgtcattacttcagaagcacttcag-cttcagaagcactt--tagcttcagacgc 28366  T
Q  275 agttttcttcagatgcttta 294  Q
    ||||||||||||||||||||    
T  28365 agttttcttcagatgcttta 28346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 18948 - 18899
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  18948 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 18899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 28342 - 28293
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  28342 ttcctttgctctccattgttcttccaagacctattgaaattaattgactt 28293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 3164 - 3245
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||||||||||||||||||   | ||||||||||||||||||||||| ||||| |||||| ||||||    
T  3164 tgtagcttctggtgatgatatagcttctgatgaaaaaccttgcttctgatgaacttctgcttctgatgacgtcatcacttca 3245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 34993 - 34894
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||||||||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  34993 tgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 34897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 34890 - 34850
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  34890 ttcctttgctctccattgttcttccaagacctattgaaatt 34850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 292
Target Start/End: Complemental strand, 7653 - 7507
Alignment:
Q  147 ctgatcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattag 242  Q
    |||||||| |||| |||||| || |||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| |||| | ||||| |      
T  7653 ctgatcaaatgtaacttctggtggtgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcactttagaggcacttc 7554  T
Q  243 aaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |  |||||||| |||||  |||||||||||||||||||||||||||||||    
T  7553 ag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 7507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 10415 - 10371
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| |||||  |||||||||||||||||||||||||||||||    
T  10415 cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 10371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7801 - 7696
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||| | ||||| ||| |||||  ||||||||||  || ||||| || ||||||||    
T  7801 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgttcttcaagtgaccgttgatacctccctttcaattcttcgttcttcttagac 7702  T
Q  99 gaggtt 104  Q
    ||||||    
T  7701 gaggtt 7696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 10363 - 10326
Alignment:
Q  316 ctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  10363 ctttgctctccattgttcttccaagacctattgaaatt 10326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 2709 - 2807
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||||||||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  2709 tgcttctgatgagcttctgcttctgatgacgtcatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 2805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 353
Target Start/End: Original strand, 2811 - 2852
Alignment:
Q  312 gttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  2811 gttcctttgctctccattgttcttccaagacctattgaaatt 2852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 2109 - 1973
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcaga 252  Q
    ||||||||||| ||||||||| ||||||||||| ||| |||||||||||| ||||||||| ||||| |||||| |||||| | ||| |   | ||||||     
T  2109 tgtagcttctggtgatgatattgcttctgatgagcttctgcttctgatgagcttctgcttctgatgacgtcatcacttcagatgcact-tcagcttcagg 2011  T
Q  253 aacacttcatagcttcagacgcagttttcttcagatgct 291  Q
    | ||||| | ||||||||||| |||||||||||||||||    
T  2010 agcacttta-agcttcagacgtagttttcttcagatgct 1973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 1967 - 1927
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  1967 ttcctttgctttccattgttcttccaagacctattgaaatt 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 5)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 13441 - 13343
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||||||||| ||||| |||||| |||||||| ||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  13441 tgcttctgatgagcttctgcttctgatgacgtcatcacttcaaaagcactccag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 13345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 13136 - 13038
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||||||||| ||||| |||||| |||||| | ||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  13136 tgcttctgatgagcttctgcttctgatgacgtcatcacttcataagcactctag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 13040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 13033 - 12993
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  13033 ttcctttgctctccattgttcttccaagacctattgaaatt 12993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 13338 - 13298
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  13338 ttcctttgctctccattgttcttccaagacctattgaaatt 13298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13654 - 13567
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcg 87  Q
    ||||||||||||||||||||||| | || || ||||||  ||||||||||| | |||||| |||||  |||||||||| ||| |||||    
T  13654 tacacttgtactttgtcaactctattaacgaaggacaaatactcagtgcttctgaaatgaccgttgatacctccctttcgattcttcg 13567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1707 - 1602
Alignment:
Q  1 tacacttgtactttgtcaactcttc-aatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctc-tcttagac 98  Q
    |||||||||||||||||||||||   ||||| ||||||| |||||||| | ||||||||| |||||  ||||||||||| || ||||| || |||||||     
T  1707 tacacttgtactttgtcaactctaataatgaaggacaagtactcagtgttcttcaaatgaccgttgatacctcccttttaattcttcgttcttcttagat 1608  T
Q  99 gaggtt 104  Q
    ||||||    
T  1607 gaggtt 1602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 1528 - 1429
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    |||||||||||| ||| ||||| ||||| ||||||||||||| | ||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||    
T  1528 tgcttctgatgagcttatgcttctgatgacgtcattacttcagaagcactccag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgc 1432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 1425 - 1376
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  || ||||||||||||||||||||||| ||| ||||    
T  1425 ttcctttgctctccattattcttccaagacctattgaaattaattgactt 1376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 20279 - 20179
Alignment:
Q  193 gcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca-ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgc 290  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| ||||| || |   |||||| | ||||||||| ||||||||| ||||||||||||||||    
T  20279 gcttctgatgaactt-tgcttctgatgacgtcattacttcagaggcactttgt--cttcaggagcacttcataacttcagacgtagttttcttcagatgc 20183  T
Q  291 ttta 294  Q
    ||||    
T  20182 ttta 20179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 20314 - 20253
Alignment:
Q  142 atcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatga 203  Q
    |||||||||| |||||||||||||| |||| | | ||||||||||||||||||||||||||||    
T  20314 atcttctgatgaactgtagcttctggtgat-acacagcttctgatgaactttgcttctgatga 20253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 20932 - 21011
Alignment:
Q  265 cttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||| |||| ||||||||||||||||||| | ||||| ||| ||  |  |||||||||| |||||||||||||||||    
T  20932 cttcagaggcagatttcttcagatgctttaggcttctctttttgttgaattatttgctctctattgttcttccaagacct 21011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 52149 - 51927
Alignment:
Q  1 tacacttgtacttt-gtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttttgatccttcgctctc-ttaga 97  Q
    |||||||||||||| ||||||||| | || || ||||||| |||||||||| ||||||||| |||||  ||||||||||  || ||||| |||  |||||    
T  52149 tacacttgtacttttgtcaactctgttaaagaaggacaagtactcagtgctcttcaaatgaccgttgatacctccctttcaattcttcgttcttattaga 52050  T
Q  98 cgaggttaacttcaagagacagctcttttgagatttcagatttaatcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaa-ctttgct 195  Q
    ||||||| |   | ||| ||||||  |||||   ||||| || ||| | ||||| |  ||||||||||| ||||||| | |||||||||||| | |||||    
T  52049 cgaggttgaaa-cgagaaacagctactttgaatcttcagtttaaatttactgattagttgtagcttctggtgatgatttcgcttctgatgaaaccttgct 51951  T
Q  196 tctgatgaacttctgcttttgatg 219  Q
    ||||||| |||||||||| |||||    
T  51950 tctgatggacttctgcttctgatg 51927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 51833 - 51784
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatttattaactt 362  Q
    |||||||||||||  |||||||| ||||||||||||||||| ||| ||||    
T  51833 ttcctttgctctccattgttctttcaagacctattgaaattgattgactt 51784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 36569 - 36471
Alignment:
Q  192 tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggca--ttagaaacttcagaaacacttcatagcttcagacgcagttttcttcagat 288  Q
    ||||| |||||| ||||||||| ||||| |||||| |||||| |||||  ||||   |||||||| |||||  |||||||||||||||||||||||||||    
T  36569 tgcttttgatgagcttctgcttctgatgacgtcatcacttcagaggcactttag---cttcagaagcactt--tagcttcagacgcagttttcttcagat 36475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 36466 - 36426
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  36466 ttcctttgctctccattgttcttccaagacctattgaaatt 36426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 1599 - 1534
Alignment:
Q  142 atcttctgatcaactgtagcttctg-tgatgatatagcttctgatgaactttgcttctgatgaactt 207  Q
    |||||||||| |||| ||||||||| |||| | | ||||||||||||||||||||||||||||||||    
T  1599 atcttctgatgaactatagcttctggtgat-acacagcttctgatgaactttgcttctgatgaactt 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 370
Target Start/End: Complemental strand, 1507 - 1382
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctct-tttgttcttccaagacct 344  Q
    |||||| | ||||||||| ||||||||||||||||||| ||| |||||||| | ||||| ||| || |    ||||||| | |||||||||| |||||||    
T  1507 cttcaggagcacttcataacttcagacgcagttttctttagaggctttaggcttctctttttgttgatattcttgctctttatttgttcttctaagacct 1408  T
Q  345 attgaaatttattaactttgcctatg 370  Q
    ||| || || || ||||||| |||||    
T  1407 attaaatttaatcaactttgtctatg 1382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 32754 - 32640
Alignment:
Q  177 gcttctgatgaactt-tgcttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgc 274  Q
    ||||||||||| ||| ||||||||||||  |||||||| ||||| |||||| |||||| ||||| |  |  || ||||| |||||  |||||||||||||    
T  32754 gcttctgatgaccttctgcttctgatgagtttctgcttctgatgacgtcatcacttcagaggcacttcat-ctgcagaagcactt--tagcttcagacgc 32658  T
Q  275 agttttcttcagatgctt 292  Q
    ||||||||||||||||||    
T  32657 agttttcttcagatgctt 32640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 32800 - 32728
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  32800 atcaattgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatg 32728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32950 - 32873
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | || || ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  32950 tacacttgtactttgtcaactctgttaacgaaggacaaatactcagtgctatccaaatgatcgttgatacctcccttt 32873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 32635 - 32595
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  32635 ttcctttgctctacattgttcttccaagacctattgaaatt 32595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 2266 - 2169
Alignment:
Q  194 cttctgatgaacttctgcttttgatg-cgtcattacttcaaaggcattagaaacttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||||  ||||||||| ||||| |||||| |||||| ||||| |  |  |||||||| |||||  |||||||||||||||||||||||||||||||    
T  2266 cttctgatgggcttctgcttctgatgacgtcatcacttcagaggcacttcag-cttcagaagcactt--tagcttcagacgcagttttcttcagatgctt 2170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 2165 - 2125
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  2165 ttcctttgctctccattgttcttccaagacctattgaaatt 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19460 - 19537
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||||||| | ||||| ||||||  |||||||||| | ||||||| |||||  ||||||||||    
T  19460 tacacttgtactttgtcaactctgttaatgaaggacaaatactcagtgctatccaaatgaccgttgatacctcccttt 19537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 19620 - 19687
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatg--aactttgcttctgatga-acttctgcttttgatg 219  Q
    ||||||||||| ||||||||| ||||||||||  ||| ||||||||||||| |||||||||| |||||    
T  19620 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagacttctgcttctgatg 19687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 5099 - 5139
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  5099 ttcctttgctctccattgttcttccaagacctattgaaatt 5139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 464 - 504
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  464 ttcctttgctctccattgttcttccaagacctattgaaatt 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 299 - 371
Alignment:
Q  150 atcaactgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||| ||||||||||| ||||||| | ||||||||| ||  | ||||||||||||| |||||||||||||||    
T  299 atcaattgtagcttctggtgatgatttcgcttctgataaaaaccttgcttctgatgaccttctgcttttgatg 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 27179 - 27224
Alignment:
Q  245 acttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||    
T  27179 acttcagaagcacttca--gcttcagacgcagttttcttcagatgctt 27224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 6520 - 6449
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttccaagacct 344  Q
    ||||||||||||||| |||||| | | | ||| ||| || |||||||||||| | |||||||||||||||||    
T  6520 gcagttttcttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaagacct 6449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 20554 - 20510
Alignment:
Q  246 cttcagaaacacttcatagcttcagacgcagttttcttcagatgctt 292  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||    
T  20554 cttcagaagcacttca--gcttcagacgcagttttcttcagatgctt 20510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 20664 - 20584
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||||||| ||||| |||||| ||||||    
T  20664 tgtagcttctggtgatgatttcgcttctgatgaaaaccttgcttctgatgaccttctgcttctgatgacgtcatcacttca 20584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 42411 - 42345
Alignment:
Q  156 tgtagcttctg-tgatgatatagcttctgatgaa--ctttgcttctgatgaacttctgcttttgatg 219  Q
    ||||||||||| ||||||||| ||||||||||||  | ||||||||||||| ||||||||| |||||    
T  42411 tgtagcttctggtgatgatatcgcttctgatgaaaaccttgcttctgatgagcttctgcttctgatg 42345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 42251 - 42211
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  42251 ttcctttgctttccattgttcttccaagacctattgaaatt 42211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 291
Target Start/End: Complemental strand, 42285 - 42257
Alignment:
Q  263 agcttcagacgcagttttcttcagatgct 291  Q
    |||||||||||||||||||||||||||||    
T  42285 agcttcagacgcagttttcttcagatgct 42257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 12722 - 12802
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaac---tttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||    |||||||||||||| ||||||||| ||||| |||||||||||||    
T  12722 gtagcttctggtgaagatattgcttctgatgaaaacttttgcttctgatgaccttctgcttctgatgacgtcattacttca 12802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 19683 - 19603
Alignment:
Q  157 gtagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    |||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  19683 gtagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 19603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 347
Target Start/End: Original strand, 1969 - 2003
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctatt 347  Q
    |||||||||||||||||||||||||| ||||||||    
T  1969 ttcctttgctctcttttgttcttccaggacctatt 2003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 294
Target Start/End: Original strand, 7681 - 7710
Alignment:
Q  265 cttcagacgcagttttcttcagatgcttta 294  Q
    ||||||||||||||||||||||||||||||    
T  7681 cttcagacgcagttttcttcagatgcttta 7710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6265 - 6188
Alignment:
Q  1 tacacttgtactttgtcaactct-tcaatgagggacaagcactcagtgcttttcaaatgaacgttggcacctcccttt 77  Q
    ||||||||||||||||||| ||| | || || ||||||  ||||||||||||||| |||| |||||  ||||||||||    
T  6265 tacacttgtactttgtcaattctgttaacgaaggacaaatactcagtgcttttcatatgaccgttgatacctcccttt 6188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 5950 - 5910
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    |||||||||||||  |||||||||||||||||||| |||||    
T  5950 ttcctttgctctccattgttcttccaagacctatttaaatt 5910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 19334 - 19398
Alignment:
Q  273 gcagttttcttcagatgctttaggttactcttcttgatggttcctttgctctcttttgttcttcca 338  Q
    |||||||||||||||||||||| | | | ||| ||| || |||||||||||||| |||||||||||    
T  19334 gcagttttcttcagatgctttaagcttc-ctttttgttgattcctttgctctctattgttcttcca 19398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 14951 - 15030
Alignment:
Q  158 tagcttctg-tgatgatatagcttctgatgaa---ctttgcttctgatgaacttctgcttttgatg-cgtcattacttca 232  Q
    ||||||||| ||| ||||| ||||||||||||   ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  14951 tagcttctggtgaagatattgcttctgatgaaaacctttgcttctgatgaccttctgcttctgatgacgtcatcacttca 15030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 292
Target Start/End: Complemental strand, 53923 - 53894
Alignment:
Q  263 agcttcagacgcagttttcttcagatgctt 292  Q
    ||||||||||||||||||||||||||||||    
T  53923 agcttcagacgcagttttcttcagatgctt 53894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 7828 - 7788
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagacctattgaaatt 353  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  7828 ttcctttgctcttcattgttcttccaagacctattgaaatt 7788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 345
Target Start/End: Complemental strand, 18393 - 18361
Alignment:
Q  313 ttcctttgctctcttttgttcttccaagaccta 345  Q
    ||||||||||||||||||||||||||| |||||    
T  18393 ttcctttgctctcttttgttcttccaaaaccta 18361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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