View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13737_low_8 (Length: 229)
Name: NF13737_low_8
Description: NF13737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13737_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 213
Target Start/End: Complemental strand, 53613824 - 53613623
Alignment:
| Q |
12 |
tagattatactttgacatatcagctgaggtcatactcattttatcatcacatattctcccttttttccttttattttgctttattattaaaccaagttca |
111 |
Q |
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| T |
53613824 |
tagatcatactttgacatatcagctgaggtcatactcattttatcatcacaaattctcccttttttccttttattttgctttattattaaaccaagttca |
53613725 |
T |
|
| Q |
112 |
tttctgtactgatatatacgtcgaaattatcaggtgattgaagttgctccggctcattgtgttgtacaagtatcaaaatctgtaggagatctaagaatgt |
211 |
Q |
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| T |
53613724 |
tttctgtactgatatatacgtcgaaattatcaggtgattgaagttgctccggctcattgtgttgtacaagtatcaaaatctgtaggagatctaagaatgt |
53613625 |
T |
|
| Q |
212 |
at |
213 |
Q |
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|| |
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| T |
53613624 |
at |
53613623 |
T |
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