View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13738_low_1 (Length: 525)
Name: NF13738_low_1
Description: NF13738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13738_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 477; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 5 - 505
Target Start/End: Complemental strand, 43020571 - 43020071
Alignment:
| Q |
5 |
aatatctaataatacagcaggaaattaaaagttcgaatctaatgaagaataaagcaaataaagatgtgtctgtctcctagttagtaccactctcttctct |
104 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43020571 |
aatagctaataatacagcaggaaattaaaagttcgaatctaatgaagaataaagcaaataaagatgtgtctgtctcctagttagtaccactctcttctct |
43020472 |
T |
|
| Q |
105 |
tttctgaaaaacaaattaagaaaattaaaagaaccttgcatatgtaaatttatacatgttgtattcaaaattaaagattactgaaaatattcggatagga |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43020471 |
tttctgaaaaacaaattaagaaaattaaaagaaccttgcatatgtaaatttatacatgttgtattcaaaattaaagattactgaaaatattcggatagga |
43020372 |
T |
|
| Q |
205 |
aaatttgaaatcagctccctctacacgtagatgccttcaaacattgataagaagttaaaattcaaaacagaaaagatagtgtgtgtcgtttgtgcccttt |
304 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
43020371 |
aaatttgaaatcaactccctctacacgtagatgccttcaaacattgataagaagttaaaattcaaaacagaaaagatagtgtgtgtcgtttgtgccctat |
43020272 |
T |
|
| Q |
305 |
ggtcagtgaatgatggacccataaaaactaaaagatattcttggaactcataccctaaagttaaatttctttttatcaggaaaatatctcagcaccagta |
404 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43020271 |
ggtcagtgaatgatggacccataaaaactaaaagatattcttggaactcatcccctaaagttaaatttctttttatcaggaaaatatctcagcaccagta |
43020172 |
T |
|
| Q |
405 |
aaagctccaaggaagttgcaatttactgctggcctggttccagtaccgtacatggtcgtagcgtaaagaatgctgagcataacttgataagcatgcatat |
504 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
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| T |
43020171 |
aaagctccaaggaagttgcaatttactgctggcctggttccagtaccgtacatggtcgtagcgtaaagaatgctgaccataacttgataagcgtgcatat |
43020072 |
T |
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| Q |
505 |
t |
505 |
Q |
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| T |
43020071 |
t |
43020071 |
T |
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