View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13739_high_16 (Length: 361)

Name: NF13739_high_16
Description: NF13739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13739_high_16
NF13739_high_16
[»] chr4 (14 HSPs)
chr4 (108-319)||(45526860-45527071)
chr4 (6-87)||(45526751-45526832)
chr4 (323-361)||(39232105-39232143)
chr4 (323-361)||(4206208-4206246)
chr4 (323-361)||(4206912-4206950)
chr4 (323-361)||(51539823-51539861)
chr4 (323-361)||(51540534-51540572)
chr4 (318-361)||(49603414-49603457)
chr4 (323-361)||(2519559-2519596)
chr4 (323-361)||(2520332-2520370)
chr4 (323-361)||(29379724-29379762)
chr4 (323-361)||(39232815-39232852)
chr4 (323-361)||(49604121-49604159)
chr4 (325-361)||(46513700-46513736)
[»] chr3 (9 HSPs)
chr3 (323-361)||(30733612-30733650)
chr3 (323-361)||(47862488-47862526)
chr3 (314-361)||(47861769-47861815)
chr3 (323-361)||(11503679-11503717)
chr3 (323-361)||(48222326-48222364)
chr3 (323-361)||(48223030-48223068)
chr3 (324-361)||(53302951-53302988)
chr3 (324-361)||(1194099-1194136)
chr3 (317-361)||(11504389-11504433)
[»] chr8 (14 HSPs)
chr8 (318-361)||(44445964-44446007)
chr8 (323-361)||(5157256-5157294)
chr8 (323-361)||(28824126-28824164)
chr8 (323-361)||(29555509-29555547)
chr8 (323-361)||(38376208-38376246)
chr8 (323-361)||(5156553-5156591)
chr8 (323-361)||(14857963-14858001)
chr8 (323-361)||(28824829-28824866)
chr8 (323-361)||(29556219-29556257)
chr8 (323-361)||(38376918-38376955)
chr8 (323-361)||(39773567-39773605)
chr8 (323-361)||(39774342-39774380)
chr8 (323-361)||(44446671-44446709)
chr8 (323-359)||(5158002-5158038)
[»] chr7 (10 HSPs)
chr7 (318-361)||(33255717-33255760)
chr7 (323-361)||(22377375-22377413)
chr7 (323-361)||(47942715-47942753)
chr7 (323-361)||(47948145-47948183)
chr7 (323-361)||(7331113-7331151)
chr7 (323-361)||(7331888-7331926)
chr7 (323-361)||(33256433-33256470)
chr7 (323-361)||(34151599-34151637)
chr7 (323-361)||(34175487-34175525)
chr7 (323-361)||(47942013-47942050)
[»] chr6 (9 HSPs)
chr6 (318-361)||(305672-305715)
chr6 (323-361)||(304975-305013)
chr6 (323-361)||(644102-644140)
chr6 (323-361)||(23950076-23950114)
chr6 (323-361)||(33775570-33775608)
chr6 (324-361)||(33776273-33776310)
chr6 (323-361)||(644805-644843)
chr6 (324-361)||(19803381-19803418)
chr6 (323-360)||(26275430-26275467)
[»] chr2 (7 HSPs)
chr2 (318-361)||(22424746-22424789)
chr2 (323-361)||(1389111-1389149)
chr2 (323-361)||(29982928-29982966)
chr2 (323-361)||(37645182-37645220)
chr2 (323-361)||(21647602-21647640)
chr2 (323-361)||(22424035-22424073)
chr2 (323-361)||(37644407-37644445)
[»] chr1 (12 HSPs)
chr1 (318-361)||(11625998-11626041)
chr1 (323-361)||(36180435-36180473)
chr1 (323-361)||(47708534-47708572)
chr1 (314-361)||(9087682-9087729)
chr1 (318-361)||(35813290-35813332)
chr1 (323-361)||(249684-249722)
chr1 (323-361)||(250388-250425)
chr1 (323-361)||(9088466-9088504)
chr1 (323-361)||(11625288-11625325)
chr1 (323-361)||(35814055-35814093)
chr1 (323-361)||(45880757-45880795)
chr1 (323-361)||(45881532-45881570)
[»] chr5 (9 HSPs)
chr5 (323-361)||(4276276-4276314)
chr5 (323-361)||(31229431-31229469)
chr5 (323-361)||(31230142-31230180)
chr5 (323-361)||(2600834-2600871)
chr5 (323-361)||(3341587-3341625)
chr5 (323-361)||(3358496-3358534)
chr5 (323-361)||(4275566-4275604)
chr5 (323-359)||(2601546-2601581)
chr5 (328-360)||(5233770-5233802)
[»] scaffold0181 (1 HSPs)
scaffold0181 (325-361)||(18086-18122)


Alignment Details
Target: chr4 (Bit Score: 175; Significance: 4e-94; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 108 - 319
Target Start/End: Original strand, 45526860 - 45527071
Alignment:
Q  108 ggatcgattagtccaaaatgagacgaattagaaaaattgaaacaacggtagacatgaacggataaagagaaacacgatgaaaattgcgcgttcgagaatt 207  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  45526860 ggatcgattggtccaaaatgagacgaatcagaaaaattgaaacaacggtagacatgaacggataaagagaaacacgatgaacattgtgcgttcgagaatt 45526959  T
Q  208 acctgcgttttcttttgagcttgtctgtgtcttaaaccctaaccaagatatttgtannnnnnnctggttaaggaaatgggtttatgtagatgcagaaaag 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  45526960 acctgcgttttcttttgagcttgtctgtgtcttaaaccctaaccaagatatttgtatttttttctggttaaggaaatgggtttatgtagatgcagaaaag 45527059  T
Q  308 catttcaaaatg 319  Q
    ||||||||||||    
T  45527060 catttcaaaatg 45527071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 45526751 - 45526832
Alignment:
Q  6 accattgaatttaaacagaaaaacaaaaattaaacagattaaatcagttaatagctcgattaacagcagaacgaagcatggt 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45526751 accattgaatttaaacagaaaaacaaaaattaaacagattaaatcagttaatagctcgattaacagcagaacgaagcatggt 45526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 39232105 - 39232143
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39232105 gattgctttttaggcccctccaatatctctttaggcccc 39232143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 4206208 - 4206246
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  4206208 gattgctttttaggcccccccaatatctctttaggcccc 4206246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 4206950 - 4206912
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  4206950 gattgctttttaggcccccccaatatctctttaggcccc 4206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 51539823 - 51539861
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  51539823 gattgctttttaggcccccccaatatctctttaggcccc 51539861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 51540572 - 51540534
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  51540572 gattgctttttaggcccccccaatatctctttaggcccc 51540534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 49603414 - 49603457
Alignment:
Q  318 tggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||| |||||||||||||||||| |||||||||||||| |||||    
T  49603414 tggaagattgctttttaggcccccccaatatctctttaagcccc 49603457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 2519559 - 2519596
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  2519559 gattgctttttaggccc-tccaatatctctttaggcccc 2519596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 2520370 - 2520332
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  2520370 gattgctttttaggccccctcaatatctctttaggcccc 2520332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 29379724 - 29379762
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  29379724 gattgctttttaggccccctcaatatctctttaggcccc 29379762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 39232852 - 39232815
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  39232852 gattgctttttaggcccc-ccaatatctctttaggcccc 39232815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 49604159 - 49604121
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  49604159 gattgcttttcaggcccccccaatatctctttaggcccc 49604121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 46513736 - 46513700
Alignment:
Q  325 ttgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||| | ||||||||||||||||||    
T  46513736 ttgctttttaggccccccaaatatctctttaggcccc 46513700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 30733612 - 30733650
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30733612 gattgctttttaggcccctccaatatctctttaggcccc 30733650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 47862526 - 47862488
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47862526 gattgctttttaggcccctccaatatctctttaggcccc 47862488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 47861769 - 47861815
Alignment:
Q  314 aaaatggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  47861769 aaaatggaagattgctttttaggcccc-ccaatatctctttaggcccc 47861815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 11503679 - 11503717
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11503679 gattgctttttaggcccccccaatatctctttaggcccc 11503717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 48222326 - 48222364
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  48222326 gattgctttttaggcccccccaatatctctttaggcccc 48222364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 48223068 - 48223030
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  48223068 gattgctttttaggcccccccaatatctctttaggcccc 48223030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 361
Target Start/End: Original strand, 53302951 - 53302988
Alignment:
Q  324 attgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  53302951 attgctttttaggcccccccaatatctctttaggcccc 53302988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 361
Target Start/End: Original strand, 1194099 - 1194136
Alignment:
Q  324 attgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||  |||||||||||||||||||    
T  1194099 attgctttttaggccccctcaatatctctttaggcccc 1194136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 11504433 - 11504389
Alignment:
Q  317 atggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||| ||||||||||||||| || ||||||||| ||||||||||    
T  11504433 atggaagattgctttttaggctcccccaatatctttttaggcccc 11504389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 44445964 - 44446007
Alignment:
Q  318 tggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  44445964 tggaagattgctttttaggcccccccaatatctctttaggcccc 44446007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 5157294 - 5157256
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  5157294 gattgctttttaggcccccccaatatctctttaggcccc 5157256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 28824126 - 28824164
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28824126 gattgctttttaggcccccccaatatctctttaggcccc 28824164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 29555509 - 29555547
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  29555509 gattgctttttaggcccccccaatatctctttaggcccc 29555547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 38376208 - 38376246
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  38376208 gattgctttttaggcccccccaatatctctttaggcccc 38376246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 5156553 - 5156591
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  5156553 gatttctttttaggcccccccaatatctctttaggcccc 5156591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 14858001 - 14857963
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  14858001 gattgctttttaggccccctcaatatctctttaggcccc 14857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 28824866 - 28824829
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28824866 gattgctttttaggcccc-ccaatatctctttaggcccc 28824829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 29556257 - 29556219
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  29556257 gattgctttttaggtccccccaatatctctttaggcccc 29556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 38376955 - 38376918
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  38376955 gattgctttttaggcccc-ccaatatctctttaggcccc 38376918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 39773567 - 39773605
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  39773567 gattgctttttaggccccctcaatatctctttaggcccc 39773605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 39774380 - 39774342
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  39774380 gattgctttttaggccccctcaatatctctttaggcccc 39774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 44446709 - 44446671
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  44446709 gattgcttttcaggcccccccaatatctctttaggcccc 44446671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 5158038 - 5158002
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcc 359  Q
    ||||||||||||||||||  |||||||||||||||||    
T  5158038 gattgctttttaggccccctcaatatctctttaggcc 5158002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 33255717 - 33255760
Alignment:
Q  318 tggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  33255717 tggaagattgctttttaggcccccccaatatctctttaggcccc 33255760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 22377413 - 22377375
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  22377413 gattgctttttaggcccctccagtatctctttaggcccc 22377375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 47942753 - 47942715
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47942753 gattgctttttaggcccccccaatatctctttaggcccc 47942715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 47948183 - 47948145
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47948183 gattgctttttaggcccccccaatatctctttaggcccc 47948145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 7331113 - 7331151
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  7331113 gattgctttttaggccccctcaatatctctttaggcccc 7331151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 7331926 - 7331888
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  7331926 gattgctttttaggccccctcaatatctctttaggcccc 7331888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 33256470 - 33256433
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33256470 gattgctttttaggcccc-ccaatatctctttaggcccc 33256433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 34151599 - 34151637
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  34151599 gattgctttttaggccccctcaatatctctttaggcccc 34151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 34175525 - 34175487
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  34175525 gattgctttttaggccccctcaatatctctttaggcccc 34175487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 47942013 - 47942050
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47942013 gattgctttttaggcccc-ccaatatctctttaggcccc 47942050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 305715 - 305672
Alignment:
Q  318 tggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  305715 tggaagattgctttttaggcccccccaatatctctttaggcccc 305672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 304975 - 305013
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  304975 gattgctttttaggcccccccaatatctctttaggcccc 305013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 644102 - 644140
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  644102 gattgctttttaggcccccccaatatctctttaggcccc 644140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 23950114 - 23950076
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23950114 gattgctttttaggctcctccaatatctctttaggcccc 23950076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 33775570 - 33775608
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33775570 gattgctttttaggcccccccaatatctctttaggcccc 33775608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 324 - 361
Target Start/End: Complemental strand, 33776310 - 33776273
Alignment:
Q  324 attgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33776310 attgctttttaggcccccccaatatctctttaggcccc 33776273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 644843 - 644805
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  644843 gattgctttttagacccccccaatatctctttaggcccc 644805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 361
Target Start/End: Original strand, 19803381 - 19803418
Alignment:
Q  324 attgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||  |||||||||||||||||||    
T  19803381 attgctttttaggccccctcaatatctctttaggcccc 19803418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 26275430 - 26275467
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggccc 360  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  26275430 gattgctttttaggccccctcaatatctctttaggccc 26275467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 22424789 - 22424746
Alignment:
Q  318 tggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  22424789 tggaagattgctttttaggcccccccaatatctctttaggcccc 22424746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 1389149 - 1389111
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1389149 gattgctttttaggcccccccaatatctctttaggcccc 1389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 29982966 - 29982928
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  29982966 gattgctttttaggcccccccaatatctctttaggcccc 29982928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 37645220 - 37645182
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  37645220 gattgctttttaggcccccccaatatctctttaggcccc 37645182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 21647602 - 21647640
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  21647602 gattgctttttaggccccctcaatatctctttaggcccc 21647640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 22424035 - 22424073
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  22424035 gattgctttttaggctcccccaatatctctttaggcccc 22424073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 37644407 - 37644445
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  37644407 gattgctttttaggccccctcaatatctctttaggcccc 37644445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 11626041 - 11625998
Alignment:
Q  318 tggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  11626041 tggaagattgctttttaggcccccccaatatctctttaggcccc 11625998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 36180473 - 36180435
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  36180473 gattgctttttaggcccccccaatatctctttaggcccc 36180435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 47708572 - 47708534
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  47708572 gattgctttttaggcccccccaatatctctttaggcccc 47708534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 9087682 - 9087729
Alignment:
Q  314 aaaatggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||| || ||||||||||||||||||  |||||||||||||||||||    
T  9087682 aaaatagaggattgctttttaggccccctcaatatctctttaggcccc 9087729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 35813290 - 35813332
Alignment:
Q  318 tggatgattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  35813290 tggaggattgctttttaggcccct-caatatctctttaggcccc 35813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 249684 - 249722
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  249684 gattgctttttaggcccccccaatatctctttagacccc 249722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 250425 - 250388
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  250425 gattgctttttaggcccc-ccaatatctctttaggcccc 250388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 9088504 - 9088466
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  9088504 gattgctttttaggccccctcaatatctctttaggcccc 9088466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 11625288 - 11625325
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11625288 gattgctttttaggcccc-ccaatatctctttaggcccc 11625325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 35814093 - 35814055
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  35814093 gattgctttttaggccccctcaatatctctttaggcccc 35814055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 45880757 - 45880795
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  45880757 gattgctttttaggccccctcaatatctctttaggcccc 45880795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 45881570 - 45881532
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  45881570 gattgctttttaggccccctcaatatctctttaggcccc 45881532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 4276314 - 4276276
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  4276314 gattgctttttaggcccccccaatatctctttaggcccc 4276276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 31229431 - 31229469
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  31229431 gattgctttttaggcccccccaatatctctttaggcccc 31229469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 361
Target Start/End: Complemental strand, 31230180 - 31230142
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  31230180 gattgctttttaggcccccccaatatctctttaggcccc 31230142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 2600834 - 2600871
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2600834 gattgctttttaggcccc-ccaatatctctttaggcccc 2600871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 3341587 - 3341625
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  3341587 gattgctttttaggccccctcaatatctctttaggcccc 3341625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 3358496 - 3358534
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  3358496 gattgctttttaggccccctcaatatctctttaggcccc 3358534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 4275566 - 4275604
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcccc 361  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  4275566 gattgctttttaggcccccctaatatctctttaggcccc 4275604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 2601581 - 2601546
Alignment:
Q  323 gattgctttttaggcccctccaatatctctttaggcc 359  Q
    |||||||||||||||||| ||||||||||||||||||    
T  2601581 gattgctttttaggcccc-ccaatatctctttaggcc 2601546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 5233770 - 5233802
Alignment:
Q  328 ctttttaggcccctccaatatctctttaggccc 360  Q
    ||||||||||||||||||||||| |||||||||    
T  5233770 ctttttaggcccctccaatatctttttaggccc 5233802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 18122 - 18086
Alignment:
Q  325 ttgctttttaggcccctccaatatctctttaggcccc 361  Q
    ||||||||||||||||  |||||||||||||||||||    
T  18122 ttgctttttaggccccctcaatatctctttaggcccc 18086  T

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