View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1373_low_35 (Length: 203)
Name: NF1373_low_35
Description: NF1373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1373_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 31 - 168
Target Start/End: Original strand, 14525480 - 14525612
Alignment:
| Q |
31 |
agatgaacactgtttgtcagaaatgtggcgctatggtttggtatgctgagaggaccggtaaacattatgctgcacttacgccaaaaatttcattgtgttg |
130 |
Q |
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| T |
14525480 |
agatgaacactgtttgtcagaaatgtggcg-----gtttggtatgctgagaggaccggtaaacattatgctgcacttacgccaaaaatttcattgtgttg |
14525574 |
T |
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| Q |
131 |
tctaaaagggaagattaagttgacgctcatgttggaac |
168 |
Q |
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| T |
14525575 |
tctaaaagggaagattaagttgccgctcatgttggaac |
14525612 |
T |
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