View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13741_high_10 (Length: 386)
Name: NF13741_high_10
Description: NF13741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13741_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 5 - 372
Target Start/End: Original strand, 52373777 - 52374144
Alignment:
| Q |
5 |
gcaaaggatggaaaaagatttggatgaagggattctgaggagtgttggcgaaggaattaaagaaagtgttttgaagaaagagggtgtagaagttggatgg |
104 |
Q |
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| T |
52373777 |
gcaaaggatggaaaaagatttggatgaagggattctgaggagtgttggcgaaggaattaaagaaagtgttttgaagaaagagggtgtagaagttggatgg |
52373876 |
T |
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| Q |
105 |
gttgttttggttaagagtgaatgtgttccgaaaactacttctgggaaattgcaaagatgggctgctaaagagaagcttcttgatggaaaaatgaaaattt |
204 |
Q |
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| T |
52373877 |
gttgttttggttaagagtgaatgtgttccgaaaactacttctgggaaattgcaaagatgggctgctaaagagaagcttcttgatggaaaaatgaaaattt |
52373976 |
T |
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| Q |
205 |
tgatggagatgaggtttggaaaagatgttatgaggataaaacatgaagtaataagaaaagtggagttggaaaagaatggtaatcatataaatggttcagt |
304 |
Q |
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| T |
52373977 |
taatggagatgaggtttggaaaagatgttatgaggataaaacatgaagtaataagaaaagtggagttggaaaagaatggtaatcatataaatggttcagt |
52374076 |
T |
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| Q |
305 |
tttaggtgcagaaactcgaagctcattgatctcacatctatgagaacagtgtgatgcctgattctatc |
372 |
Q |
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| T |
52374077 |
tttaggtgcagaaactcgaagctcattgatctcacatctatgagaacagtgtgatgcctgattctatc |
52374144 |
T |
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