View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13741_high_5 (Length: 480)
Name: NF13741_high_5
Description: NF13741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13741_high_5 |
 | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold1393 (1 HSPs) |
| | |
|
| [»] scaffold0005 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 381; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 6 - 463
Target Start/End: Original strand, 28954989 - 28955447
Alignment:
| Q |
6 |
aggagcagagagtagtagttggcccgccccctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaac |
105 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28954989 |
aggatcagagagtagtagttggcccgccccctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaac |
28955088 |
T |
|
| Q |
106 |
tgtcccaataccaggatacggagttgaccaccattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatctt |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28955089 |
tgtcccaataccaggatacggagttgaccaccactggacaaaaaaaagtatattttgggacctcccctattggaaagataacttgctcagacataatctt |
28955188 |
T |
|
| Q |
205 |
gatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagact |
304 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28955189 |
gatgtaatgcacattgagaagaatttttttgacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagact |
28955288 |
T |
|
| Q |
305 |
tagaagtgtattgtaaaagaaaggacttggagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagc |
404 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28955289 |
tagaagtgtattgtaaaagaagggacttggagttaaaacctcaaccgaatggaaagttgttgaaacccaaggcaatatacgctctaacttccgaagaagc |
28955388 |
T |
|
| Q |
405 |
taaggtagtttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28955389 |
taatgcagtttgtcaatggttgaaagatttgagaatgcctgacggatgttgttctaact |
28955447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 14322574 - 14322704
Alignment:
| Q |
160 |
tgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatgg |
259 |
Q |
| |
|
|||||||| || || | |||||| || || || ||||||||||||||||| ||||||||||| ||||| ||||| ||| || ||||||||||| |
|
|
| T |
14322574 |
tgggaccttccttacttgaaagacaatttactaagacataatcttgatgttatgcacattgaaaagaatttttttgacaatatacttcacacagtgatga |
14322673 |
T |
|
| Q |
260 |
atgttaaagggaagacaaaagataatgagaa |
290 |
Q |
| |
|
|||| || || ||||||||||||||||| |
|
|
| T |
14322674 |
atgtctccggtaaaacaaaagataatgagaa |
14322704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 373; Significance: 0; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 14 - 463
Target Start/End: Complemental strand, 22123864 - 22123414
Alignment:
| Q |
14 |
agagtagtagttggcccgccccctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22123864 |
agagtagtagttggcccgccccctaaattcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaa |
22123765 |
T |
|
| Q |
114 |
taccaggatacggagttgaccaccattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22123764 |
taccaggatacggagttgaccaccactggacaaaaaaaagtatattttggaacctcccctattggaaagataacttgctcagacataatcttgatgtaat |
22123665 |
T |
|
| Q |
213 |
gcacattgagaagaannnnnnngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtg |
312 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22123664 |
gcacattgagaagaatttttttgacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtg |
22123565 |
T |
|
| Q |
313 |
tattgtaaaagaaaggacttggagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtag |
412 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22123564 |
tattgtaaaagatgggacttggagttaaaacctcaaccgaatggaaagttgttgaaacccaaggcaatatacgctctaacttccgaagaagctaaggcag |
22123465 |
T |
|
| Q |
413 |
tttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22123464 |
tttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
22123414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 35 - 462
Target Start/End: Complemental strand, 37571291 - 37570863
Alignment:
| Q |
35 |
cctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaataccaggatacggagttgacc |
134 |
Q |
| |
|
||||| || ||||||||||| ||||| ||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| |||||||||| |||| |
|
|
| T |
37571291 |
cctaagattacatcagaagaagtgtggacaagagtttgtgattatccaaaagtcactgattatggtcgagctgtcccaataccaagatacggagtagacc |
37571192 |
T |
|
| Q |
135 |
accattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnn |
233 |
Q |
| |
|
| || ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37571191 |
atcactggactaaaaggagtatattttgggacctcccatattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaatgtctt |
37571092 |
T |
|
| Q |
234 |
ngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtgtattgtaaaagaaaggacttg |
333 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || |||||||| | |||||| || |||||||||||| || | ||||| ||||||||||| ||| |
|
|
| T |
37571091 |
tgacaacatatttaacacagtgatggatgtcaaaggaaaaacaaaagacactgagaaggctagaaaagacttacaaatatattgcaaaagaaaggatttg |
37570992 |
T |
|
| Q |
334 |
gagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtagtttgtcaatggttgaaagatt |
433 |
Q |
| |
|
||||| ||||||||||||||||| ||||| |||||||| || || | ||| ||| || || ||||||| || |||| |||||||||||||| |||| |
|
|
| T |
37570991 |
gagttgaaacctcaaccgaatgggaagttgttgaaaccgaaagccaactacagcctatctgcccaagaagcaaaattagtgtgtcaatggttgaaggatt |
37570892 |
T |
|
| Q |
434 |
tgagaatgcctgacggatattgttctaac |
462 |
Q |
| |
|
|||||||||| || ||||||| ||||||| |
|
|
| T |
37570891 |
tgagaatgcccgatggatattcttctaac |
37570863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 34628589 - 34628669
Alignment:
| Q |
6 |
aggagcagagagtagtagttggcccgccccctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaag |
86 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34628589 |
aggatcagagagtagtagttggcccgccccctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaag |
34628669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 2064248 - 2064178
Alignment:
| Q |
157 |
ttttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaa |
227 |
Q |
| |
|
|||||||||||||| || |||||||| || || || ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
2064248 |
ttttgggacctcccttactggaaagacaatttactaagacataatcttgatgttatgcacattgaaaagaa |
2064178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 11 - 463
Target Start/End: Complemental strand, 57985 - 57532
Alignment:
| Q |
11 |
cagagagtagtagttggcccgccccctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcc |
110 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
57985 |
cagagagtagtaattggcccgccccctaaaattacatcagtagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcc |
57886 |
T |
|
| Q |
111 |
caataccaggatacggagttgaccaccattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgt |
209 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
57885 |
caataccaggatacggagttaaccaccactggacaaaaaagagtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgt |
57786 |
T |
|
| Q |
210 |
aatgcacattgagaagaannnnnnngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaa |
309 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
57785 |
aatgcacattgagaagaatttttttgacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccataaaagatttagaa |
57686 |
T |
|
| Q |
310 |
gtgtattgtaaaagaaaggacttggagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaagg |
409 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
57685 |
gtgtattgtaaaagaagggacttggagttacaacctcaaccgaatggaaagttgttgaaacccaaggcaatatacactctaacttctgaagaagctaagg |
57586 |
T |
|
| Q |
410 |
tagtttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
57585 |
caatttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
57532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 345; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 6 - 463
Target Start/End: Complemental strand, 10800141 - 10799683
Alignment:
| Q |
6 |
aggagcagagagtagtagttggcccgccccctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaac |
105 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10800141 |
aggatcagagagtagtagttggcccgccccctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaac |
10800042 |
T |
|
| Q |
106 |
tgtcccaataccaggatacggagttgaccaccattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatctt |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10800041 |
tgtcccaataccaggatacggagttgaccaccacttgacaaaaaagagtatattttgggacctcccatattggaaagataacttgctcagacataatctt |
10799942 |
T |
|
| Q |
205 |
gatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagact |
304 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
10799941 |
gatgtaatgcacattgagaagaatttttttgacaacatatttaacatagtgatggatgttaaagggaagacaaaagataaagagaaagacagaaaagact |
10799842 |
T |
|
| Q |
305 |
tagaagtgtattgtaaaagaaaggacttggagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagc |
404 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
10799841 |
tagaagtgtattgtaaaagaagggacttggagttacaacctcaaccgaatggaaagttgttgaaacccaaggcaatatacactctaacttctgaagaagc |
10799742 |
T |
|
| Q |
405 |
taaggtagtttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
||||| | ||||||||||||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10799741 |
taaggcaatttgtcaatggttaaaagatttgagaatgcctgacggacattgttctaact |
10799683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 35 - 462
Target Start/End: Complemental strand, 38969823 - 38969395
Alignment:
| Q |
35 |
cctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaataccaggatacggagttgacc |
134 |
Q |
| |
|
||||| || ||||||||||| ||||| ||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| |||||||||| |||| |
|
|
| T |
38969823 |
cctaagattacatcagaagaagtgtggacaagagtttgtgattatccaaaagtcactgattatggtcgagctgtcccaataccaagatacggagtagacc |
38969724 |
T |
|
| Q |
135 |
accattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnn |
233 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38969723 |
accactggactaaaaggagtatattttgggacctcccatattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaatgtctt |
38969624 |
T |
|
| Q |
234 |
ngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtgtattgtaaaagaaaggacttg |
333 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || |||||||| |||||||| || |||||||||||| || | ||||| ||||||||||| ||| |
|
|
| T |
38969623 |
tgacaacatatttaacacagtgatggatgtcaaaggcaaaacaaaagacaatgagaaggctagaaaagacttacaaatatattgcaaaagaaaggatttg |
38969524 |
T |
|
| Q |
334 |
gagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtagtttgtcaatggttgaaagatt |
433 |
Q |
| |
|
||||| ||||||||||||||||| ||||| |||||||| || || | ||| ||| || || ||||||| || |||| |||||||||||||| |||| |
|
|
| T |
38969523 |
gagttgaaacctcaaccgaatgggaagttgttgaaaccgaaagccaactacagcctatctgcccaagaagcgaaattagtgtgtcaatggttgaaggatt |
38969424 |
T |
|
| Q |
434 |
tgagaatgcctgacggatattgttctaac |
462 |
Q |
| |
|
|||||||||| || ||||||| ||||||| |
|
|
| T |
38969423 |
tgagaatgcccgatggatattcttctaac |
38969395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 22330120 - 22330171
Alignment:
| Q |
412 |
gtttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| | ||||||||||||||||||| |
|
|
| T |
22330120 |
gtttgtcaatggttgaaagaattgaggatgtcagacggatattgttctaact |
22330171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 263
Target Start/End: Original strand, 14808301 - 14808412
Alignment:
| Q |
152 |
gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacac |
251 |
Q |
| |
|
|||| |||||||| ||||| || |||||||| || || || ||||||||||| ||||| ||||||||||| ||||| ||||| ||| ||||||| |
|
|
| T |
14808301 |
gtattttttgggatctcccttactggaaagacaatttactaagacataatctggatgttatgcacattgaaaagaatttttgtgacaatatagttaacac |
14808400 |
T |
|
| Q |
252 |
agtgatggatgt |
263 |
Q |
| |
|
||||||| |||| |
|
|
| T |
14808401 |
agtgatgaatgt |
14808412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 303
Target Start/End: Complemental strand, 1935176 - 1935072
Alignment:
| Q |
199 |
aatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaa |
298 |
Q |
| |
|
||||| ||||| ||||| ||||||||||| ||||| ||||||||||| || ||| |||| ||||| ||||| ||||| ||||||||||| || | |
|
|
| T |
1935176 |
aatctcgatgtcatgcatattgagaagaatttttttgacaatatatttaacactgtcatgaatgtgaaaggcaagactaaagacaatgagaaagctagga |
1935077 |
T |
|
| Q |
299 |
aagac |
303 |
Q |
| |
|
||||| |
|
|
| T |
1935076 |
aagac |
1935072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 35 - 462
Target Start/End: Original strand, 35596703 - 35597131
Alignment:
| Q |
35 |
cctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaataccaggatacggagttgacc |
134 |
Q |
| |
|
||||| || ||||||||||| ||||| ||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| |||||||||| |||| |
|
|
| T |
35596703 |
cctaagattacatcagaagaagtgtggacaagagtttgtgattatccaaaagtcactgattatggtcgagctgtcccaataccaagatacggagtagacc |
35596802 |
T |
|
| Q |
135 |
accattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnn |
233 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35596803 |
accactggactaaaaggagtatattttgggacctcccatattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaatgtctt |
35596902 |
T |
|
| Q |
234 |
ngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtgtattgtaaaagaaaggacttg |
333 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || |||||||| |||||||| || |||||||||||| || | ||||| ||||||||||| ||| |
|
|
| T |
35596903 |
tgacaacatatttaacacagtgatggatgtcaaaggcaaaacaaaagacaatgagaaggctagaaaagacttacaaatatattgcaaaagaaaggatttg |
35597002 |
T |
|
| Q |
334 |
gagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtagtttgtcaatggttgaaagatt |
433 |
Q |
| |
|
||||| ||||||||||||||||| ||||| |||||||| || || | ||| ||| || || ||||||| || |||| |||||||||||||| |||| |
|
|
| T |
35597003 |
gagttgaaacctcaaccgaatgggaagttgttgaaaccgaaagccaactacagcctatctgcccaagaagcgaaattagtgtgtcaatggttgaaggatt |
35597102 |
T |
|
| Q |
434 |
tgagaatgcctgacggatattgttctaac |
462 |
Q |
| |
|
|||||||||| || ||||||| ||||||| |
|
|
| T |
35597103 |
tgagaatgcccgatggatattcttctaac |
35597131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 35 - 462
Target Start/End: Complemental strand, 4965622 - 4965194
Alignment:
| Q |
35 |
cctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaataccaggatacggagttgacc |
134 |
Q |
| |
|
||||| || ||||||||||| ||||| ||||||||| |||||||||| ||||| ||||||| ||| | |||||||||||||| |||||||||| |||| |
|
|
| T |
4965622 |
cctaagattacatcagaagaagtgtggacaagagtttgtgattatccaaaagttactgattatggtcgagctgtcccaataccaagatacggagtagacc |
4965523 |
T |
|
| Q |
135 |
accattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnn |
233 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4965522 |
accactggactaaaaggagtatattttgggacctcccatattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaatgtctt |
4965423 |
T |
|
| Q |
234 |
ngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtgtattgtaaaagaaaggacttg |
333 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || |||||||| |||||||| || |||||||||||| || | ||||| || |||||||| ||| |
|
|
| T |
4965422 |
tgacaacatatttaacacagtgatggatgtcaaaggcaaaacaaaagacaatgagaaggctagaaaagacttacaaatatattgcaagagaaaggatttg |
4965323 |
T |
|
| Q |
334 |
gagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtagtttgtcaatggttgaaagatt |
433 |
Q |
| |
|
||||| ||||||||||||||||| || || |||||||| || || | ||| ||| || || ||||||| || |||| |||||||||||||| |||| |
|
|
| T |
4965322 |
gagttgaaacctcaaccgaatgggaaattgttgaaaccgaaagccaactacagcctatctgcccaagaagcgaaattagtgtgtcaatggttgaaggatt |
4965223 |
T |
|
| Q |
434 |
tgagaatgcctgacggatattgttctaac |
462 |
Q |
| |
|
|||||||||| || ||||||| ||||||| |
|
|
| T |
4965222 |
tgagaatgcccgatggatattcttctaac |
4965194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 152 - 462
Target Start/End: Complemental strand, 37367830 - 37367520
Alignment:
| Q |
152 |
gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacac |
251 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
37367830 |
gtatattttgggacctctcatattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaatgtctttgacaacatatttaacac |
37367731 |
T |
|
| Q |
252 |
agtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtgtattgtaaaagaaaggacttggagttaaaacctcaaccg |
351 |
Q |
| |
|
|||||||||||| ||||| || |||||||| |||||||| || |||||||||||| || | ||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
37367730 |
agtgatggatgtcaaaggcaaaacaaaagacaatgagaaggctagaaaagacttacaaatatattgcaaaagaaaggatttggagttgaaacctcaaccg |
37367631 |
T |
|
| Q |
352 |
aatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtagtttgtcaatggttgaaagatttgagaatgcctgacggat |
451 |
Q |
| |
|
||||| ||||| |||||||| || || | ||| ||| || || ||||||| || | || |||||||||||||| |||||||||||||| || |||| |
|
|
| T |
37367630 |
aatgggaagttgttgaaaccgaaagccaactacagcctatctgcccaagaagcgaaatttgtgtgtcaatggttgaaggatttgagaatgcccgatggat |
37367531 |
T |
|
| Q |
452 |
attgttctaac |
462 |
Q |
| |
|
||| ||||||| |
|
|
| T |
37367530 |
attcttctaac |
37367520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 37389334 - 37389225
Alignment:
| Q |
35 |
cctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaataccaggatacggagttgacc |
134 |
Q |
| |
|
||||| || ||||||||||| ||||| ||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| ||||||||||||||| |
|
|
| T |
37389334 |
cctaagattacatcagaagaagtgtggacaagagtttgtgattatccaaaagtcactgattatggtcgagctgtcccaataccaagatacggagttgacc |
37389235 |
T |
|
| Q |
135 |
accattggac |
144 |
Q |
| |
|
| || ||||| |
|
|
| T |
37389234 |
agcactggac |
37389225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 183; Significance: 8e-99; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 35 - 462
Target Start/End: Complemental strand, 7302526 - 7302098
Alignment:
| Q |
35 |
cctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaataccaggatacggagttgacc |
134 |
Q |
| |
|
||||| || |||||| |||| ||||| ||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| |||||||||| |||| |
|
|
| T |
7302526 |
cctaagattacatcataagaagtgtggacaagagtttgtgattatccaaaagtcactgattatggtcgagctgtcccaataccaagatacggagtagacc |
7302427 |
T |
|
| Q |
135 |
accattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnn |
233 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7302426 |
accactggactaaaaggagtatattttgggacctcccatattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaatgtctt |
7302327 |
T |
|
| Q |
234 |
ngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtgtattgtaaaagaaaggacttg |
333 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || |||||||| |||||||| || |||||||||||| || | ||||| ||||||||||| ||| |
|
|
| T |
7302326 |
tgacaacatatttaacacagtgatggatgtcaaaggcaaaacaaaagacaatgagaaggctagaaaagacttacaaatatattgcaaaagaaaggatttg |
7302227 |
T |
|
| Q |
334 |
gagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtagtttgtcaatggttgaaagatt |
433 |
Q |
| |
|
||||| ||||||||||||||||| ||||| |||||||| || || | ||| ||| || || ||||||| || |||| |||||||||||||| |||| |
|
|
| T |
7302226 |
gagttgaaacctcaaccgaatgggaagttgttgaaaccgaaagccaactacagcctatctgcccaagaagcgaaattagtgtgtcaatggttgaaggatt |
7302127 |
T |
|
| Q |
434 |
tgagaatgcctgacggatattgttctaac |
462 |
Q |
| |
|
|||||||||| || ||||||| ||||||| |
|
|
| T |
7302126 |
tgagaatgcccgatggatattcttctaac |
7302098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 35 - 462
Target Start/End: Complemental strand, 18338409 - 18337981
Alignment:
| Q |
35 |
cctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaataccaggatacggagttgacc |
134 |
Q |
| |
|
||||| || ||||||||||| ||||| ||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| |||||||||| |||| |
|
|
| T |
18338409 |
cctaagattacatcagaagaagtgtggacaagagtttgtgattatccaaaagtcactgattatggtcgagctgtcccaataccaagatacggagtagacc |
18338310 |
T |
|
| Q |
135 |
accattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnn |
233 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18338309 |
accactggactaaaaggagtatattttgggacctcccatattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaatgtctt |
18338210 |
T |
|
| Q |
234 |
ngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtgtattgtaaaagaaaggacttg |
333 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || |||||||| |||||||| || |||||||||||| || | ||||| ||| ||||||| ||| |
|
|
| T |
18338209 |
tgacaacatatttaacacagtgatggatgtcaaaggcaaaacaaaagacaatgagaaggctagaaaagacttacaaatatattgcaaacgaaaggatttg |
18338110 |
T |
|
| Q |
334 |
gagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtagtttgtcaatggttgaaagatt |
433 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||| || || | | | ||| || || ||||||| || |||| |||||||||||||| |||| |
|
|
| T |
18338109 |
gagttgaaacctcaaccgaatgggaagttattgaaaccgaaagccaactccagcctatctgcccaagaagcgaaattagtgtgtcaatggttgaaggatt |
18338010 |
T |
|
| Q |
434 |
tgagaatgcctgacggatattgttctaac |
462 |
Q |
| |
|
|||||||||| || ||||||| ||||||| |
|
|
| T |
18338009 |
tgagaatgcccgatggatattcttctaac |
18337981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 4806344 - 4806293
Alignment:
| Q |
412 |
gtttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
4806344 |
gtttgtcaatggttgaaagagttgaggatgccagacggatattgttctaact |
4806293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 12764961 - 12764910
Alignment:
| Q |
412 |
gtttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
12764961 |
gtttgtcaatggttgaaagagttgaggatgccagacggatattgttctaact |
12764910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 4806596 - 4806466
Alignment:
| Q |
160 |
tgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatgg |
259 |
Q |
| |
|
||||| ||||| || ||||||||||| || || ||||||||||||||||| ||||||||||| ||||| ||||| ||| || ||||||||||| |
|
|
| T |
4806596 |
tgggatctcccttactggaaagataatttactgagacataatcttgatgttatgcacattgaaaagaacttttgtgacaatataattcacacagtgatga |
4806497 |
T |
|
| Q |
260 |
atgttaaagggaagacaaaagataatgagaa |
290 |
Q |
| |
|
|||| || || ||||||||||||||||| |
|
|
| T |
4806496 |
atgtctctggtaaaacaaaagataatgagaa |
4806466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 12765213 - 12765083
Alignment:
| Q |
160 |
tgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatgg |
259 |
Q |
| |
|
||||| ||||| || ||||||||||| || || ||||||||||||||||| ||||||||||| ||||| ||||| ||| || ||||||||||| |
|
|
| T |
12765213 |
tgggatctcccttactggaaagataatttactgagacataatcttgatgttatgcacattgaaaagaacttttgtgacaatataattcacacagtgatga |
12765114 |
T |
|
| Q |
260 |
atgttaaagggaagacaaaagataatgagaa |
290 |
Q |
| |
|
|||| || || ||||||||||||||||| |
|
|
| T |
12765113 |
atgtctctggtaaaacaaaagataatgagaa |
12765083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 290
Target Start/End: Original strand, 13566595 - 13566733
Alignment:
| Q |
152 |
gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacac |
251 |
Q |
| |
|
|||| ||||||||||| || || |||||||| || || || ||||||||||||||||| ||||||||||| ||||| ||||| ||| || |||| |
|
|
| T |
13566595 |
gtattttttgggaccttccttactggaaagacaatttactaagacataatcttgatgttatgcacattgaaaagaatatttttgacaatatacttcacac |
13566694 |
T |
|
| Q |
252 |
agtgatggatgttaaagggaagacaaaagataatgagaa |
290 |
Q |
| |
|
||||||| |||| || || ||||||||||||||||| |
|
|
| T |
13566695 |
agtgatgaatgtctccggtaaaacaaaagataatgagaa |
13566733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 179; Significance: 2e-96; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 35 - 462
Target Start/End: Complemental strand, 33905465 - 33905037
Alignment:
| Q |
35 |
cctaaaatcacatcagaagaggtgtgcacaagagttagtgattatcctaaagtcactgattttggcacaactgtcccaataccaggatacggagttgacc |
134 |
Q |
| |
|
||||| || ||||||||||| ||||| ||||||||| |||||||||| ||||||||||||| ||| | |||||||||||||| |||||||||| |||| |
|
|
| T |
33905465 |
cctaagattacatcagaagaagtgtggacaagagtttgtgattatccaaaagtcactgattatggtcgagctgtcccaataccaagatacggagtagacc |
33905366 |
T |
|
| Q |
135 |
accattggacnnnnnnn-gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnn |
233 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33905365 |
accactggactaaaaggagtatattttgggacctcccatattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaatgtctt |
33905266 |
T |
|
| Q |
234 |
ngacaacatatttaacacagtgatggatgttaaagggaagacaaaagataatgagaaagccagaaaagacttagaagtgtattgtaaaagaaaggacttg |
333 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || |||||||| |||||||| || |||||||||||| || | ||||| || |||||||| ||| |
|
|
| T |
33905265 |
tgacaacatatttaacacagtgatggatgtcaaaggcaaaacaaaagacaatgagaaggctagaaaagacttacaaatatattgcaagagaaaggatttg |
33905166 |
T |
|
| Q |
334 |
gagttaaaacctcaaccgaatggaaagttattgaaacccaaggcaatatacgctctaacttccgaagaagctaaggtagtttgtcaatggttgaaagatt |
433 |
Q |
| |
|
||||| ||||||||||||||||| || || |||||||| || || | ||| ||| || || ||||||| || |||| |||||||||||||| |||| |
|
|
| T |
33905165 |
gagttgaaacctcaaccgaatgggaaattgttgaaaccgaaagccaactacaacctatctgcccaagaagcgaaattagtgtgtcaatggttgaaggatt |
33905066 |
T |
|
| Q |
434 |
tgagaatgcctgacggatattgttctaac |
462 |
Q |
| |
|
|||||||||| || ||||||| ||||||| |
|
|
| T |
33905065 |
tgagaatgcccgatggatattcttctaac |
33905037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 290
Target Start/End: Original strand, 20149134 - 20149272
Alignment:
| Q |
152 |
gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacac |
251 |
Q |
| |
|
|||| ||||||||||| || ||||||||||| || || || ||||||||||||||||| ||||||||||| ||||| ||||| ||| || |||| |
|
|
| T |
20149134 |
gtattttttgggaccttccttattggaaagacaatttactgagacataatcttgatgttatgcacattgaaaagaatttttttgacaatatacttcacac |
20149233 |
T |
|
| Q |
252 |
agtgatggatgttaaagggaagacaaaagataatgagaa |
290 |
Q |
| |
|
||||||| |||| ||| || ||||||||||||||||| |
|
|
| T |
20149234 |
agtgatgaatgtctcaggtaaaacaaaagataatgagaa |
20149272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 23010808 - 23010859
Alignment:
| Q |
412 |
gtttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
23010808 |
gtttgtcaatggttgaaagaattgaggatgccagacggatattgttctaact |
23010859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 23010556 - 23010623
Alignment:
| Q |
160 |
tgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaa |
227 |
Q |
| |
|
||||| ||||| || ||||||||||| || || ||||||||| ||||||| ||||||||||| ||||| |
|
|
| T |
23010556 |
tgggatctcccttactggaaagataatttactgagacataattttgatgttatgcacattgaaaagaa |
23010623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 7407176 - 7407125
Alignment:
| Q |
412 |
gtttgtcaatggttgaaagatttgagaatgcctgacggatattgttctaact |
463 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
7407176 |
gtttgtcaatggttgaaagagttgaggatgccagacggatattgttctaact |
7407125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 7407428 - 7407298
Alignment:
| Q |
160 |
tgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatgg |
259 |
Q |
| |
|
||||| ||||| || ||||||||||| || || ||||||||||||||||| ||||||||||| ||||| ||||| ||| || ||||||||||| |
|
|
| T |
7407428 |
tgggatctcccttactggaaagataatttactgagacataatcttgatgttatgcacattgaaaagaacttttgtgacaatataattcacacagtgatga |
7407329 |
T |
|
| Q |
260 |
atgttaaagggaagacaaaagataatgagaa |
290 |
Q |
| |
|
|||| || || ||||||||||||||||| |
|
|
| T |
7407328 |
atgtctctggtaaaacaaaagataatgagaa |
7407298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 263
Target Start/End: Original strand, 14899172 - 14899283
Alignment:
| Q |
152 |
gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacac |
251 |
Q |
| |
|
|||| |||||||| ||||| || |||||||| || || || ||||||||||| ||||| ||||||||||| ||||| ||||| ||| ||||||| |
|
|
| T |
14899172 |
gtattttttgggatctcccttactggaaagacaatttactaagacataatctggatgttatgcacattgaaaagaatttttgtgacaatatagttaacac |
14899271 |
T |
|
| Q |
252 |
agtgatggatgt |
263 |
Q |
| |
|
||||||| |||| |
|
|
| T |
14899272 |
agtgatgaatgt |
14899283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1393 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1393
Description:
Target: scaffold1393; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 279 - 409
Alignment:
| Q |
160 |
tgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatgg |
259 |
Q |
| |
|
||||| ||||| || ||||||||||| || || ||||||||||||||||| ||||||||||| ||||| ||||| ||| || ||||||||||| |
|
|
| T |
279 |
tgggatctcccttactggaaagataatttactgagacataatcttgatgttatgcacattgaaaagaacttttgtgacaatataattcacacagtgatga |
378 |
T |
|
| Q |
260 |
atgttaaagggaagacaaaagataatgagaa |
290 |
Q |
| |
|
|||| || || ||||||||||||||||| |
|
|
| T |
379 |
atgtctctggtaaaacaaaagataatgagaa |
409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 263
Target Start/End: Complemental strand, 31426 - 31315
Alignment:
| Q |
152 |
gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacac |
251 |
Q |
| |
|
|||| |||||||| ||||| || |||||||| || || || ||||||||||| ||||| ||||||||||| ||||| ||||| ||| ||||||| |
|
|
| T |
31426 |
gtattttttgggatctcccttactggaaagacaatttactaagacataatctggatgttatgcacattgaaaagaatttttgtgacaatatagttaacac |
31327 |
T |
|
| Q |
252 |
agtgatggatgt |
263 |
Q |
| |
|
||||||| |||| |
|
|
| T |
31326 |
agtgatgaatgt |
31315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 358742 - 358596
Alignment:
| Q |
152 |
gtatattttgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacac |
251 |
Q |
| |
|
|||| |||||||| ||||| || |||||||| || || || ||||||||| | ||||| ||||||||||| ||||| ||||| ||| ||||||| |
|
|
| T |
358742 |
gtattttttgggatctcccttactggaaagacaatttactaagacataatatggatgttatgcacattgaaaagaatttttgtgacaatatagttaacac |
358643 |
T |
|
| Q |
252 |
agtgatggatgttaaagggaagacaaaagataatgagaaagccagaa |
298 |
Q |
| |
|
||||||| |||| || || ||||||||||| |||||||| |||| |
|
|
| T |
358642 |
agtgatgaatgtctctggtaaaacaaaagataacgagaaagctagaa |
358596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 23959192 - 23959322
Alignment:
| Q |
160 |
tgggacctcccctattggaaagataacttgctcagacataatcttgatgtaatgcacattgagaagaannnnnnngacaacatatttaacacagtgatgg |
259 |
Q |
| |
|
|||||||| || || | |||||| || || || ||||||||||||||||| ||||||||||| ||||| ||||| ||| || ||||||||||| |
|
|
| T |
23959192 |
tgggaccttccttacttgaaagacaatttactaagacataatcttgatgttatgcacattgaaaagaatatttttgacaatatacttcacacagtgatga |
23959291 |
T |
|
| Q |
260 |
atgttaaagggaagacaaaagataatgagaa |
290 |
Q |
| |
|
|||| || || ||||||||||||||||| |
|
|
| T |
23959292 |
atgtctccggtaaaacaaaagataatgagaa |
23959322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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