View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13741_low_20 (Length: 275)
Name: NF13741_low_20
Description: NF13741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13741_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 7382887 - 7382630
Alignment:
| Q |
1 |
cctaaaacaagagtagtagcaatgtatatgcatctttgtcgtgagcttcattttacaatataataagattcacatgnnnnnnngttaagggttttatcta |
100 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
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| T |
7382887 |
cctaaaacaagagtagtagcaatgcatatgcatctttgtcgtgagcttcattttacgatataataagattcacatgtttttttgttaagggttttatcta |
7382788 |
T |
|
| Q |
101 |
tataacttgtaaccatagtataacgttacttcacttttcggtaccacaattatccaatgcccttcatcttaagtttcctgaatgaaagcaacttcttggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7382787 |
tataacttgtaaccatagtataacgttacttcacttttcggtaccacaattatccaatgcccttcatcttaagtttcctgaatgaaagcaacttcttggt |
7382688 |
T |
|
| Q |
201 |
ttaatggcttaagaaatctatttataaacactggcagctataaaatattatttctaca |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7382687 |
ttaatggcttaagaaatctatttataaacactggcagctataaaatattatttctaca |
7382630 |
T |
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