View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13741_low_25 (Length: 254)
Name: NF13741_low_25
Description: NF13741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13741_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 13792755 - 13792508
Alignment:
| Q |
1 |
tattggaagacttgcttttaaaacaacaattaatatgttgtcgaatacggtttattcagttgatttggttcgttcgagtgatatagctggagagtttaag |
100 |
Q |
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| T |
13792755 |
tattggaagacttgcttttaaaacaacgattaatatgttgtcgaatacggtttattcagttgatttggttcgttcgagcgatatagctggagagtttaag |
13792656 |
T |
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| Q |
101 |
gaattagttacaaatattatgaaggaagttggaagagctaatattgcagattgttttcctgttttgaaagttatggatccaattggtattagaagaagga |
200 |
Q |
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| T |
13792655 |
gaattagttacaaatattatgaaggaagttggaagagctaatattgcagattgttttcctgttttgaaagttttggatccaattggtattagaagaagga |
13792556 |
T |
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| Q |
201 |
ctggtgaatattttgggaagttgttaggtatttttcaagggttggttg |
248 |
Q |
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| T |
13792555 |
ctggtgaatattttgggaagttgttaggtatttttcaagggttggttg |
13792508 |
T |
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