View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13741_low_26 (Length: 232)
Name: NF13741_low_26
Description: NF13741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13741_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 8115136 - 8115325
Alignment:
| Q |
17 |
aaaatcagttcctccccatttcaagaaaattctcacttccttctatcacaagtctcttctcttttatttgaagaaggaacannnnnnnnataaaaaaggt |
116 |
Q |
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| T |
8115136 |
aaaatcagttcctccccatttcaagaaaattctcacttccttctatcacaagtctcttctcttttatttgaagaaggaaca-tttttttataaaaaaggt |
8115234 |
T |
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| Q |
117 |
aagaagttaatttgcaagtttaacaaattatgatgtacaattcatataaaaacgagaaatggttccaaccagaaagtgggaagttcaatctaacttg |
213 |
Q |
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| T |
8115235 |
aagaagttaatttgcaagtttaacaaattatg------tattcatataaaaacgagaaatggttccaaccagaaagtgggaagttcaatctaacttg |
8115325 |
T |
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