View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13743_low_7 (Length: 381)
Name: NF13743_low_7
Description: NF13743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13743_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 11 - 321
Target Start/End: Complemental strand, 42132256 - 42131946
Alignment:
| Q |
11 |
catcatcactcaggtaactataatacaagttactacttttcttctctttactacannnnnnncttgcttactattttttgctagctttataccaacatgt |
110 |
Q |
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| T |
42132256 |
catcatcactcaggtaactataatacaagttactacttttcttctctttactacatttttttcttgcttactattttttgctagctttataccaacatgt |
42132157 |
T |
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| Q |
111 |
ttcatatttggtacgagaaattgtctgatattttcccacaacataaacatgtgtatggaactatatgtcacgcattattcacttcaaagtatcaagagtt |
210 |
Q |
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| T |
42132156 |
ttcatatttggtacgagaaattgtctgatattttcccacaacataaacatgtgtatggaactatatgtcatgcattattcacttcaaaatatcaagagtt |
42132057 |
T |
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| Q |
211 |
tatgctgataatgatattgcaatcatcacagcaagtattacatgcaatgctcctagctggttaagtcctcatcaagattgataatacactgcacacttct |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42132056 |
tatgctgataatgatattgcaatcatcacagcaagtattgcatgcaatgctcctagctggttaagtcctcatcaagattgataatacactgcacacttct |
42131957 |
T |
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| Q |
311 |
catctcaaagg |
321 |
Q |
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||||||||||| |
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| T |
42131956 |
catctcaaagg |
42131946 |
T |
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