View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13744_high_6 (Length: 476)

Name: NF13744_high_6
Description: NF13744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13744_high_6
NF13744_high_6
[»] chr1 (1 HSPs)
chr1 (18-467)||(36315013-36315465)
[»] chr8 (43 HSPs)
chr8 (19-467)||(19389897-19390345)
chr8 (242-467)||(19344454-19344679)
chr8 (20-451)||(19336766-19337206)
chr8 (242-408)||(19504652-19504818)
chr8 (244-466)||(19489443-19489664)
chr8 (236-423)||(19470107-19470294)
chr8 (236-423)||(19541031-19541218)
chr8 (236-423)||(19591480-19591667)
chr8 (241-426)||(19458413-19458598)
chr8 (241-426)||(19556091-19556276)
chr8 (19-439)||(19354801-19355227)
chr8 (236-439)||(19410120-19410323)
chr8 (19-146)||(19410434-19410561)
chr8 (236-439)||(19457139-19457342)
chr8 (19-146)||(19457453-19457580)
chr8 (19-146)||(19523498-19523625)
chr8 (236-439)||(19523736-19523939)
chr8 (249-439)||(19375930-19376120)
chr8 (19-152)||(19448135-19448268)
chr8 (19-152)||(19532808-19532941)
chr8 (242-417)||(19173419-19173597)
chr8 (19-206)||(19468927-19469108)
chr8 (19-154)||(19376236-19376371)
chr8 (19-152)||(19555848-19555981)
chr8 (19-206)||(19344742-19344923)
chr8 (19-146)||(19469863-19469993)
chr8 (19-146)||(19540787-19540917)
chr8 (19-146)||(19591781-19591911)
chr8 (348-467)||(19373462-19373581)
chr8 (244-439)||(19404064-19404256)
chr8 (244-439)||(19447846-19448041)
chr8 (244-439)||(19533035-19533230)
chr8 (20-146)||(19489728-19489854)
chr8 (19-140)||(19504420-19504544)
chr8 (19-206)||(19404321-19404502)
chr8 (19-206)||(19173178-19173356)
chr8 (19-146)||(19287338-19287468)
chr8 (60-152)||(19468140-19468231)
chr8 (241-285)||(19468341-19468385)
chr8 (105-152)||(19185068-19185115)
chr8 (236-285)||(19469168-19469217)
chr8 (105-140)||(16004306-16004341)
chr8 (105-152)||(19458256-19458303)


Alignment Details
Target: chr1 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 18 - 467
Target Start/End: Original strand, 36315013 - 36315465
Alignment:
Q  18 aaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36315013 aaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgag 36315112  T
Q  118 cacaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccattaacatctatt 217  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36315113 aacaccagagtaatctagtgataaaactgttgaatcttcttctgagtcaaagggatgatttctatcataaaaccacactactgtgccattaacatctatt 36315212  T
Q  218 acaatcaagtatcttctcaattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttg 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36315213 acaatcaagtatcttctcaattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttg 36315312  T
Q  318 ttgcattaacataaagactagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatg---a 414  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  36315313 ttgcattaacataaagactagtagtagtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaata 36315412  T
Q  415 atattgtttcaaaacgaagagaaatgtactcaccaaacccgaaggagaataat 467  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  36315413 atattgtttcaaaaagaagagaaatgtactcatcaaacccgaaggagaataat 36315465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 3e-80; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 19 - 467
Target Start/End: Complemental strand, 19390345 - 19389897
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| ||||||| |||||| |||| |||||||||  ||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  19390345 aaagttaccggtgtctagcatagttgccatagtgttgtttatgggttgaggtgaagagtaaatgattattggtttcctattttgagattctattttgagc 19390246  T
Q  119 acaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccattaacatctatta 218  Q
    ||||||| ||| | || ||||||||||| ||| | | | |||| |      || ||||||| || ||||||||||||| |||||| |||||||  |  ||    
T  19390245 acaccagtgtagtttaatgataaaactgctgagtttacgtctacg------ggttgatttcgattataaaaccacactcctgtgcgattaacagttgcta 19390152  T
Q  219 caatcaagtatc-----ttctcaattcaa-gacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatc 312  Q
     | | ||||| |     || |  ||| || ||||||||||| |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||    
T  19390151 tagttaagtaaccacccttgttgattaaaagacaatacttgtcttgtttagaacgtagcttggaattggaattcaatgtatcacctggcttcaaactatc 19390052  T
Q  313 gtttgttgcattaacataaagactagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaat 412  Q
     ||||||||||||||| |||   ||||||  ||| ||||||||||||||||||||||||| | || |||||||||||||  | |||||||||||||  ||    
T  19390051 atttgttgcattaacacaaatgttagtagaagtaatccaccacaaccataagtatatcaatacaacttgtttctttatttcatagcttatcatgattgat 19389952  T
Q  413 gaatattgtttcaaaacgaagagaaatgtactcaccaaacccgaaggagaataat 467  Q
    ||  |||||||||||| |||||||||| ||||||| ||||||||| |||||||||    
T  19389951 gataattgtttcaaaaagaagagaaatatactcactaaacccgaacgagaataat 19389897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 242 - 467
Target Start/End: Complemental strand, 19344679 - 19344454
Alignment:
Q  242 agacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtag 341  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||   ||||||    
T  19344679 agacaatacttgccttgtttagaacatagcttggatttggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatgttagtag 19344580  T
Q  342 tggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaatgt 441  Q
      ||| ||||||||||||||||||||||||| | || ||||||||||||  ||||||||||||||||| |||||||||||||||||| |||||||||| |    
T  19344579 aagtaatccaccacaaccataagtatatcaatacaacttgtttctttatcttaaagcttatcatgatcgatgaatattgtttcaaaaagaagagaaatat 19344480  T
Q  442 actcaccaaacccgaaggagaataat 467  Q
    ||| | | ||||||||||||||||||    
T  19344479 acttatcgaacccgaaggagaataat 19344454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 20 - 451
Target Start/End: Complemental strand, 19337206 - 19336766
Alignment:
Q  20 aagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatcttgacattctattttga 116  Q
    |||||||| ||||||||||||||||||||||||| |||| | |||||||| |||   |||||||| ||||||   ||||||| |||| ||||||||||||    
T  19337206 aagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatgataattggtacattcctattttgaaattctattttga 19337107  T
Q  117 gcacaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccattaacatc--t 214  Q
    | ||||||||||| |||||||||| ||||| |||||      ||| | | | ||| ||||||||||| || | ||||||||||| ||| | |||| |  |    
T  19337106 gtacaccagagtagtctagtgatagaactgctgaat------ctatggctatgggttgatttctatcgtacatccacactactgcgccgtcaacaccact 19337013  T
Q  215 a-ttacaatcaagta----tcttctcaattcaa-----gacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttc 304  Q
    | |||||| |||||     ||||| | ||  ||     ||||| |||| ||||||| |||||||||| |||| |||||||| ||||||||||||||||||    
T  19337012 acttacaaccaagtgagcttcttcgctatcgaaatatagacaaaactttccttgttcagaacatagcttggatttggaatttaatgtatcacctggcttc 19336913  T
Q  305 aaactatcgtttgttgcattaacataaagactagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatca 404  Q
    ||||||||  ||||||| |||||| ||| | ||| ||| ||  ||||||||||||||||||||||| ||| ||||||||| ||| || ||||||||||||    
T  19336912 aaactatcacttgttgctttaacacaaatattagcagtagtgttccaccacaaccataagtatatccaaacaatttgtttatttcttttaaagcttatca 19336813  T
Q  405 tgatcaatgaatattgtttcaaaacgaagagaaatgtactcaccaaa 451  Q
    ||||  |||||||||||||||||| |||||||||| |||| ||||||    
T  19336812 tgattgatgaatattgtttcaaaaagaagagaaatatacttaccaaa 19336766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 19504652 - 19504818
Alignment:
Q  242 agacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtag 341  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| || ||| ||||||||    
T  19504652 agacaatacttgtcttgtttagaacatagcgtggaattggaattcaatgtatcacctggcttcaaactatctttcgttgcattaccacaaatactagtag 19504751  T
Q  342 tggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgat 408  Q
    | ||||||||||||||||||||||||||||| | || |||||||||||||   || |||||||||||    
T  19504752 tagtactccaccacaaccataagtatatcaatacaacttgtttctttatttcgaaacttatcatgat 19504818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 244 - 466
Target Start/End: Complemental strand, 19489664 - 19489443
Alignment:
Q  244 acaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtg 343  Q
    |||||||||||||||||| ||||||||| |||| ||| || | | ||||||||||||||||||||||||  |||||||||||||| ||| ||| |||||     
T  19489664 acaatacttgccttgtttggaacatagcttggatttgtaagtcactgtatcacctggcttcaaactatcacttgttgcattaacacaaatactcgtagta 19489565  T
Q  344 gtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaatgtac 443  Q
    ||| || |||||||||| ||| ||||||||| | | |||||||||||| ||||||||||||||||   ||| ||||||||||||| |||||||||| |||    
T  19489564 gtattc-accacaaccaaaagcatatcaaaacagtctgtttctttattttaaagcttatcatgattgctgagtattgtttcaaaatgaagagaaatatac 19489466  T
Q  444 tcaccaaacccgaaggagaataa 466  Q
    ||||||||||| |||||| ||||    
T  19489465 tcaccaaaccccaaggagtataa 19489443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 236 - 423
Target Start/End: Original strand, 19470107 - 19470294
Alignment:
Q  236 aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac 335  Q
    |||| ||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||       
T  19470107 aattgaagacaaaacttgccttgtttagaacatagcttggatttggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatgt 19470206  T
Q  336 tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgttt 423  Q
    ||||||  ||| ||||||||||||||||||||||||| | || ||||||||| |||  ||||||||||||| |  |||||||||||||    
T  19470207 tagtagaagtaatccaccacaaccataagtatatcaatacaacttgtttcttgatttcaaagcttatcatgtttgatgaatattgttt 19470294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 236 - 423
Target Start/End: Original strand, 19541031 - 19541218
Alignment:
Q  236 aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac 335  Q
    |||| ||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||       
T  19541031 aattgaagacaaaacttgccttgtttagaacatagcttggatttggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatgt 19541130  T
Q  336 tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgttt 423  Q
    ||||||  ||| ||||||||||||||||||||||||| | || ||||||||| |||  ||||||||||||| |  |||||||||||||    
T  19541131 tagtagaagtaatccaccacaaccataagtatatcaatacaacttgtttcttgatttcaaagcttatcatgtttgatgaatattgttt 19541218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 236 - 423
Target Start/End: Complemental strand, 19591667 - 19591480
Alignment:
Q  236 aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac 335  Q
    |||| ||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| |||       
T  19591667 aattgaagacaaaacttgccttgtttagaacatagcttggatttggaattcaatgtatcacctggcttcaaactatcatttgttgcattaacacaaatgt 19591568  T
Q  336 tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgttt 423  Q
    ||||||  ||| ||||||||||||||||||||||||| | || ||||||||| |||  ||||||||||||| |  |||||||||||||    
T  19591567 tagtagaagtaatccaccacaaccataagtatatcaatacaacttgtttcttgatttcaaagcttatcatgtttgatgaatattgttt 19591480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 241 - 426
Target Start/End: Original strand, 19458413 - 19458598
Alignment:
Q  241 aagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagta 340  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||| | |||| ||| | ||| |    
T  19458413 aagacaaaacttgccttgtttagaacatagcgtggaattggaattcaatgtatcacctggcttcaaactatcacgttttgcttcaacacaaatattagca 19458512  T
Q  341 gtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaa 426  Q
    || ||| ||||||||||||||||||||||||| | || |||||||||||||   ||||||||||||||  ||||||||||||||||    
T  19458513 gtagtaatccaccacaaccataagtatatcaatacaacttgtttctttatttccaagcttatcatgattgatgaatattgtttcaa 19458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 241 - 426
Target Start/End: Original strand, 19556091 - 19556276
Alignment:
Q  241 aagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagta 340  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||| | |||| ||| | ||| |    
T  19556091 aagacaaaacttgccttgtttagaacatagcgtggaattggaattcaatgtatcacctggcttcaaactatcacgttttgcttcaacacaaatattagca 19556190  T
Q  341 gtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaa 426  Q
    || ||| ||||||||||||||||||||||||| | || |||||||||||||   ||||||||||||||  ||||||||||||||||    
T  19556191 gtagtaatccaccacaaccataagtatatcaatacaacttgtttctttatttccaagcttatcatgattgatgaatattgtttcaa 19556276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 439
Target Start/End: Complemental strand, 19355227 - 19354801
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatcttgacattctattttg 115  Q
    ||||||||| ||||||||||||||||||||||||| |||| | |||| |||  ||   |||||||| || |||   ||||||| |||| |||||||||||    
T  19355227 aaagttacctgtgtctaacatagtggccacagtgtcgttggttggttcaggcaaataataaatgataatcggtacattcctattttgaaattctattttg 19355128  T
Q  116 agcacaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccattaacatc-- 213  Q
    |||||||||||||| |||||||||| ||||| ||||| |      | ||| | ||| |||||||||||||| | ||||||||||| ||||| || | |      
T  19355127 agcacaccagagtagtctagtgatagaactgctgaatat------atgtctatgggttgatttctatcatacatccacactactgggccatcaaaaccac 19355034  T
Q  214 ta-ttacaatcaagta----tcttctcaattcaa-----gacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggctt 303  Q
    || ||| || |||||     ||||| | ||| ||     |||||||| |||||||||||||||||||  ||||||| | ||  ||| ||||||||||| |    
T  19355033 tacttataaccaagtgagcttcttcgctattgaaatatagacaatacatgccttgtttagaacataggttggaatttgcatccaatttatcacctggcct 19354934  T
Q  304 caaactatcgtttgttgcattaacataaagactagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatc 403  Q
    ||||||||| |||||||| |||||| |||  ||||||||| |   |||||||||||||| ||||||||| | || |||||||||||||  ||||||||||    
T  19354933 caaactatcatttgttgctttaacacaaatgctagtagtgtt---ccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatc 19354837  T
Q  404 atgatcaatgaatattgtttcaaaacgaagagaaat 439  Q
    |||||  ||||||||||||| |||| ||||||||||    
T  19354836 atgattgatgaatattgtttaaaaaagaagagaaat 19354801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 439
Target Start/End: Complemental strand, 19410323 - 19410120
Alignment:
Q  236 aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac 335  Q
    |||| ||||||| ||||||||||||||||||||||| |||| ||| |||| ||| ||||||||||||||||||||||  ||||||| | |||| ||| |     
T  19410323 aattgaagacaaaacttgccttgtttagaacatagcttggatttgtaattcaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatat 19410224  T
Q  336 tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagag 435  Q
    ||| ||| ||  ||||||||||||||| ||||||||| | || |||||||||||||  |||||||||||| ||   ||||||||||||||||| ||||||    
T  19410223 tagcagtagtgttccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatcattgttgaatattgtttcaaaaagaagag 19410124  T
Q  436 aaat 439  Q
    ||||    
T  19410123 aaat 19410120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 19410561 - 19410434
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  19410561 aaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatgattattggtttcctattttgagattctattttgagc 19410462  T
Q  119 acaccagagtaatctagtgataaaactg 146  Q
    ||||||||||| |||||||||| |||||    
T  19410461 acaccagagtagtctagtgatagaactg 19410434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 439
Target Start/End: Complemental strand, 19457342 - 19457139
Alignment:
Q  236 aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac 335  Q
    |||| ||||||| ||||||||||||||||||||||| |||| ||| |||| ||| ||||||||||||||||||||||  ||||||| | |||| ||| |     
T  19457342 aattgaagacaaaacttgccttgtttagaacatagcttggatttgtaattcaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatat 19457243  T
Q  336 tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagag 435  Q
    ||| ||| ||  ||||||||||||||| ||||||||| | || |||||||||||||  |||||||||||| ||   ||||||||||||||||| ||||||    
T  19457242 tagcagtagtgttccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatcattgttgaatattgtttcaaaaagaagag 19457143  T
Q  436 aaat 439  Q
    ||||    
T  19457142 aaat 19457139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 19457580 - 19457453
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  19457580 aaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatgattattggtttcctattttgagattctattttgagc 19457481  T
Q  119 acaccagagtaatctagtgataaaactg 146  Q
    ||||||||||| |||||||||| |||||    
T  19457480 acaccagagtagtctagtgatagaactg 19457453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 19523498 - 19523625
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| | |||||||||||||||||||||||||||| | ||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  19523498 aaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatgattattggtttcctattttgagattctattttgagc 19523597  T
Q  119 acaccagagtaatctagtgataaaactg 146  Q
    ||||||||||| |||||||||| |||||    
T  19523598 acaccagagtagtctagtgatagaactg 19523625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 439
Target Start/End: Original strand, 19523736 - 19523939
Alignment:
Q  236 aattcaagacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagac 335  Q
    |||| ||||||| ||||||||||||||||||||||| |||| ||| |||| ||| ||||||||||||||||||||||  ||||||| | |||| ||| |     
T  19523736 aattgaagacaaaacttgccttgtttagaacatagcttggatttgtaattcaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatat 19523835  T
Q  336 tagtagtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagag 435  Q
    ||| ||| ||  ||||||||||||||| ||||||||| | || |||||||||||||  |||||||||||| ||   ||||||||||||||||| ||||||    
T  19523836 tagcagtagtgttccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatcattgttgaatattgtttcaaaaagaagag 19523935  T
Q  436 aaat 439  Q
    ||||    
T  19523936 aaat 19523939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 249 - 439
Target Start/End: Complemental strand, 19376120 - 19375930
Alignment:
Q  249 acttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtggtact 348  Q
    ||||||||||||| ||| ||||||||||||| | || |||| ||||||||||||||||||||||  ||||||| | |||| ||| | ||| ||| ||  |    
T  19376120 acttgccttgttttgaatatagcgtggaatttgcatcaaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatattagcagtagtgtt 19376021  T
Q  349 ccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaat 439  Q
    |||||||||||||| ||||||||| | || |||||||||||||  |||||||||||| ||  |||||||||||||||||| ||||||||||    
T  19376020 ccaccacaaccataggtatatcaatacaacttgtttctttatttcaaagcttatcatcattgatgaatattgtttcaaaaagaagagaaat 19375930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 19448268 - 19448135
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| |||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||| ||||||||||||| |||  ||||||||||||||    
T  19448268 aaagttacctgtgtctaatatagtggccaaagtgttgtttatgggttgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagc 19448169  T
Q  119 acaccagagtaatctagtgataaaactgttgaat 152  Q
    |||||||| ||||||||||||| ||||| |||||    
T  19448168 acaccagaataatctagtgatagaactgctgaat 19448135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 19532808 - 19532941
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| |||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||| ||||||||||||| |||  ||||||||||||||    
T  19532808 aaagttacctgtgtctaatatagtggccaaagtgttgtttatgggttgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagc 19532907  T
Q  119 acaccagagtaatctagtgataaaactgttgaat 152  Q
    |||||||| ||||||||||||| ||||| |||||    
T  19532908 acaccagaataatctagtgatagaactgctgaat 19532941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 19173419 - 19173597
Alignment:
Q  242 agacaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagt-- 339  Q
    |||||| ||||||||||||||||||||| | |||| || ||||| ||||||||||||||||||||||||||  ||||||| |||||| ||| | ||||      
T  19173419 agacaaaacttgccttgtttagaacataacttggatttcgaattcaatgtatcacctggcttcaaactatcacttgttgctttaacacaaatattagtag 19173518  T
Q  340 -agtggtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaata 417  Q
     ||| ||| ||||||||||||||||||||||||| | || |||||||||||||  |||||||||||||||  |||||||    
T  19173519 cagttgtattccaccacaaccataagtatatcaatacaacttgtttctttatttcaaagcttatcatgattgatgaata 19173597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 19468927 - 19469108
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| |||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||| ||||||||||||| |||  ||||||||||||||    
T  19468927 aaagttacctgtgtctaatatagtggccatagtgttgtttatgggttgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagc 19469026  T
Q  119 acaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccat 206  Q
    ||||||||||| |||| ||||| ||||| ||||      | |||||||| ||  |||||| ||||||| | |||||||||||||||||    
T  19469027 acaccagagtagtctaatgatagaactgctgaa------tttaagtcaatggaatgatttatatcatacatccacactactgtgccat 19469108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 19376371 - 19376236
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| |||||||| |||||||||| |||||||||  | ||||||||||||| ||||||||| ||||||||||||| |||  ||||||||||||||    
T  19376371 aaagttacctgtgtctaatatagtggccaaagtgttgtttattggttgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagc 19376272  T
Q  119 acaccagagtaatctagtgataaaactgttgaatct 154  Q
    ||||||||||| |||||||||| ||||| |||||||    
T  19376271 acaccagagtagtctagtgatagaactgctgaatct 19376236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 19555848 - 19555981
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| |||||||| |||||||||| |||||||||  ||||||||||||||| ||||||||| ||||||||||||| |||  ||||||||||||||    
T  19555848 aaagttacctgtgtctaatatagtggccatagtgttgtttatgggttgaggtgaagagtaaatgattattggtttcctattttgtgattctattttgagc 19555947  T
Q  119 acaccagagtaatctagtgataaaactgttgaat 152  Q
    ||||||||||| |||| ||||| ||||| |||||    
T  19555948 acaccagagtagtctaatgatagaactgctgaat 19555981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 19344923 - 19344742
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| |||||||| |||||||||| |||||||||  ||||||||||||| | ||||||||| ||||||||||||| ||   ||||||||||||||    
T  19344923 aaagttacctgtgtctaatatagtggccaaagtgttgtttatgggttgaggtgacgagtaaatgattattggtttcctattttatgattctattttgagc 19344824  T
Q  119 acaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccat 206  Q
    |||||||| ||||||||||||| ||||| ||||      | |||||||| ||  |||||||||||||| | ||||||||||| |||||    
T  19344823 acaccagaataatctagtgatagaactgctgaa------tttaagtcaatggaatgatttctatcatacatccacactactgcgccat 19344742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 19469863 - 19469993
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattgg---tttcctatcttgacattctattttg 115  Q
    |||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| ||||||||| |||||   |||||||| |||| |||||||||||    
T  19469863 aaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatgattattggtaatttcctattttgagattctattttg 19469962  T
Q  116 agcacaccagagtaatctagtgataaaactg 146  Q
    |||||||||||||| |||||| |||||||||    
T  19469963 agcacaccagagtagtctagtaataaaactg 19469993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 19540787 - 19540917
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattgg---tttcctatcttgacattctattttg 115  Q
    |||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| ||||||||| |||||   |||||||| |||| |||||||||||    
T  19540787 aaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatgattattggtaatttcctattttgagattctattttg 19540886  T
Q  116 agcacaccagagtaatctagtgataaaactg 146  Q
    |||||||||||||| |||||| |||||||||    
T  19540887 agcacaccagagtagtctagtaataaaactg 19540917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 19591911 - 19591781
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattgg---tttcctatcttgacattctattttg 115  Q
    |||||||||||||||||| |||||||||| |||||||||| | ||||||||||||| ||||||||| |||||   |||||||| |||| |||||||||||    
T  19591911 aaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatgattattggtaatttcctattttgagattctattttg 19591812  T
Q  116 agcacaccagagtaatctagtgataaaactg 146  Q
    |||||||||||||| |||||| |||||||||    
T  19591811 agcacaccagagtagtctagtaataaaactg 19591781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 348 - 467
Target Start/End: Complemental strand, 19373581 - 19373462
Alignment:
Q  348 tccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaatgtactcac 447  Q
    ||||||||||||||||||||||||| | || ||||||||||||  ||||||||||||||||| |||||||||||||||||| |||||||||| |||| |     
T  19373581 tccaccacaaccataagtatatcaatacaacttgtttctttatcttaaagcttatcatgatcgatgaatattgtttcaaaaagaagagaaatatactgat 19373482  T
Q  448 caaacccgaaggagaataat 467  Q
    | ||||||||||||||||||    
T  19373481 cgaacccgaaggagaataat 19373462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 244 - 439
Target Start/End: Complemental strand, 19404256 - 19404064
Alignment:
Q  244 acaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtg 343  Q
    ||||||||| |||||||||||||||||  ||||||| | ||  ||| |||||||||||||||||||||| ||| |||| |||||| |||  ||||| |||    
T  19404256 acaatacttaccttgtttagaacataggttggaatttgcatccaatttatcacctggcttcaaactatcatttattgctttaacacaaatgctagtcgtg 19404157  T
Q  344 gtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaat 439  Q
     |   |||||||||||||| ||||||||| | || |||||||||||||  ||| |||||||| ||  |||||||||||||||||| ||||||||||    
T  19404156 tt---ccaccacaaccataggtatatcaatacaacttgtttctttatttcaaaacttatcatcattgatgaatattgtttcaaaaagaagagaaat 19404064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 439
Target Start/End: Complemental strand, 19448041 - 19447846
Alignment:
Q  244 acaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtg 343  Q
    |||| ||||||||||||| ||| ||||||||||||| | || |||| ||||||||||||||||||||||  ||||||| | |||| ||| | ||| |       
T  19448041 acaaaacttgccttgttttgaatatagcgtggaatttgcatcaaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatattagcaaca 19447942  T
Q  344 gtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaat 439  Q
    ||  ||||||||||||||| ||||||||| | |  |||||||||||||  |||||||||||||||  ||||||||| |||||||| ||||||||||    
T  19447941 gtgttccaccacaaccataggtatatcaatagatcttgtttctttatttcaaagcttatcatgattcatgaatattttttcaaaaagaagagaaat 19447846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 439
Target Start/End: Original strand, 19533035 - 19533230
Alignment:
Q  244 acaatacttgccttgtttagaacatagcgtggaattggaattaaatgtatcacctggcttcaaactatcgtttgttgcattaacataaagactagtagtg 343  Q
    |||| ||||||||||||| ||| ||||||||||||| | || |||| ||||||||||||||||||||||  ||||||| | |||| ||| | ||| |       
T  19533035 acaaaacttgccttgttttgaatatagcgtggaatttgcatcaaatttatcacctggcttcaaactatcacttgttgcttcaacacaaatattagcaaca 19533134  T
Q  344 gtactccaccacaaccataagtatatcaaaataatttgtttctttattctaaagcttatcatgatcaatgaatattgtttcaaaacgaagagaaat 439  Q
    ||  ||||||||||||||| ||||||||| | |  |||||||||||||  |||||||||||||||  ||||||||| |||||||| ||||||||||    
T  19533135 gtgttccaccacaaccataggtatatcaatagatcttgtttctttatttcaaagcttatcatgattcatgaatattttttcaaaaagaagagaaat 19533230  T

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Target: chr8; HSP #33
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 19489854 - 19489728
Alignment:
Q  20 aagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagca 119  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||| |||   ||||||||| ||||||||||||| |||  ||||||||||||||     
T  19489854 aagttaccggtgtctaacatagtggccaccgtgttgttggtgggttgagttgacaagtaaatgattattggtttcctattttgtgattctattttgagcg 19489755  T
Q  120 caccagagtaatctagtgataaaactg 146  Q
    ||||||||||  |||||||||||||||    
T  19489754 caccagagtaggctagtgataaaactg 19489728  T

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Target: chr8; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 19504420 - 19504544
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatcttgacattctattttg 115  Q
    ||||||||| ||||||||||||||||||||||||| |||| | |||||||| |||| ||||||||| ||||||   ||||||| |||| |||||||||||    
T  19504420 aaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaagagtaaatgattattggtaaattcctattttgaaattctattttg 19504519  T
Q  116 agcacaccagagtaatctagtgata 140  Q
    |||||||||||||| |||| |||||    
T  19504520 agcacaccagagtagtctaatgata 19504544  T

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Target: chr8; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 19404502 - 19404321
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| |||||||| ||||| |||| |||||||||  |||||||||||||||  |||||||| ||||||||||||  |||  ||||||||||||||    
T  19404502 aaagttacctgtgtctaatatagtagccaaagtgttgtttatgggttgaggtgaagaataaatgataattggtttcctactttgtgattctattttgagc 19404403  T
Q  119 acaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccat 206  Q
    ||||| ||||| ||||| |||| ||||| ||||      |||||||||| ||  |||||||||||||| | ||| ||||||| |||||    
T  19404402 acaccggagtagtctagcgatagaactgctgaa------tctaagtcaatggaatgatttctatcatacatccatactactgcgccat 19404321  T

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Target: chr8; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 19173178 - 19173356
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagc 118  Q
    ||||||||| |||||||| |||||||||| ||||||  ||   ||||||||||||| | | ||||| ||||||||||||| |||  ||| ||||||||||    
T  19173178 aaagttacctgtgtctaatatagtggccaaagtgtttatg---ggttgaggtgaagagcatatgattattggtttcctattttgtgattgtattttgagc 19173274  T
Q  119 acaccagagtaatctagtgataaaactgttgaatcttcttctaagtcaaaggggtgatttctatcataaaaccacactactgtgccat 206  Q
    |||||||| ||||||||||| | ||||| ||||      | |||||||| ||  |||||||||||||| | ||||||||||| |||||    
T  19173275 acaccagaataatctagtgaaagaactgctgaa------tttaagtcaatggaatgatttctatcatacatccacactactgcgccat 19173356  T

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Target: chr8; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 19287468 - 19287338
Alignment:
Q  19 aaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgtaaatgatcattggt---ttcctatcttgacattctattttg 115  Q
    ||||||||| ||||||||||||||||| ||||| || ||| | || ||||| |||| ||||||||| || |||   ||||||| |||| |||||||||||    
T  19287468 aaagttaccggtgtctaacatagtggcgacagtattattggtcggatgaggcgaagagtaaatgataatcggtaatttcctattttgagattctattttg 19287369  T
Q  116 agcacaccagagtaatctagtgataaaactg 146  Q
    |||||||||||||| |||| ||||| |||||    
T  19287368 agcacaccagagtagtctaatgatagaactg 19287338  T

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Target: chr8; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 19468140 - 19468231
Alignment:
Q  60 tgggttgaggtgaagtgtaaatgatcattggtttcctatcttgacattctattttgagcacaccagagtaatctagtgataaaactgttgaat 152  Q
    ||||||||||||||| ||||||||| |||||||||| || |||  ||||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  19468140 tgggttgaggtgaagagtaaatgattattggtttcc-attttgtgattctattttgagcacaccagagtagtctaatgatagaactgctgaat 19468231  T

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Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 19468341 - 19468385
Alignment:
Q  241 aagacaatacttgccttgtttagaacatagcgtggaattggaatt 285  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  19468341 aagacaaaacttgccttgtttagaacatagcgtggaattggaatt 19468385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 19185115 - 19185068
Alignment:
Q  105 attctattttgagcacaccagagtaatctagtgataaaactgttgaat 152  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  19185115 attctattttgagcacaccagagtagtctagtgatagaactgctgaat 19185068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 19469168 - 19469217
Alignment:
Q  236 aattcaagacaatacttgccttgtttagaacatagcgtggaattggaatt 285  Q
    |||| ||||||| ||||||||||||||||||||||| |||| ||||||||    
T  19469168 aattgaagacaaaacttgccttgtttagaacatagcttggatttggaatt 19469217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 16004341 - 16004306
Alignment:
Q  105 attctattttgagcacaccagagtaatctagtgata 140  Q
    ||||||||||||||||||||||||| ||||||||||    
T  16004341 attctattttgagcacaccagagtagtctagtgata 16004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 19458256 - 19458303
Alignment:
Q  105 attctattttgagcacaccagagtaatctagtgataaaactgttgaat 152  Q
    ||||||||||||||||||||||||| |||| ||||| ||||| |||||    
T  19458256 attctattttgagcacaccagagtagtctaatgatagaactgctgaat 19458303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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