View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13745_low_4 (Length: 383)
Name: NF13745_low_4
Description: NF13745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13745_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 23 - 369
Target Start/End: Original strand, 46136134 - 46136467
Alignment:
| Q |
23 |
ctcccatcaatcataatgaatgtatttgatgaaagaatattgttgttaattttttaagagtatggtttcacttcttatataata--ttgttattgtgctg |
120 |
Q |
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| T |
46136134 |
ctcccatcaatcataatgaatgtatttgatgaaagaatactgttattaattttttaagagtatggtttcacttcttatataataaattgttattgtgctg |
46136233 |
T |
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| Q |
121 |
atacgagtataagcttctttgatttcattatggctatccccccaatgtcactaaattgcgtgtcatttgattttacagcattctcattacctcaatttta |
220 |
Q |
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| T |
46136234 |
atatgagtataagcttctttgatttcattatggctatccccccaatgtc---------------atttgattttacagcattctcattacctcaatttta |
46136318 |
T |
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| Q |
221 |
cacccttcgtgtcatgttcaatcaagcaacaaatatgcagtcgaaagtattgaagcgtaatctatataaagactaccttacttatcacttttattacttg |
320 |
Q |
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|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46136319 |
cacccttcttgtcatgttcaatcgagcaacaaatatgcagtcgaaagtattgaagcgtaatctatataaagactaccttacttatcacttttattacttg |
46136418 |
T |
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| Q |
321 |
atacgactggtgtacttgccctttgtggtagttgcatttagatgatgtc |
369 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
46136419 |
atacgactggtgtacttgccctttgtggtagttgcatttagctgatgtc |
46136467 |
T |
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