View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13747_low_11 (Length: 344)
Name: NF13747_low_11
Description: NF13747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13747_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 11 - 325
Target Start/End: Original strand, 411508 - 411822
Alignment:
| Q |
11 |
cagagactggtcagataagcattgatggaaaagtgaagtacggtacaccacaccttacatgtgtgggatcttttgctgtggatgtgagcttagaagggaa |
110 |
Q |
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| T |
411508 |
cagagactggtcagataagcattgatggaaaagtgaagtacggtacaccacaccttacatgtgtgggatcttttgctgtggatgtgagcttagaagggaa |
411607 |
T |
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| Q |
111 |
tctgattttgtgcagacagattgatcaacctgggatgattggtactgtcggaaacatattaggcgagaaaaatgtgaatgtgagctttatgagcgttgga |
210 |
Q |
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| T |
411608 |
tctgattttgtgcagacagattgatcaacctgggatgattggtactgtcggaaacatattaggcgagaaaaatgtgaatgtgagctttatgagtgttgga |
411707 |
T |
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| Q |
211 |
agaacatcgcgtaggaagaaagcgcttatggctattggcgtcgatgaagagccaaataaggaagctcttgagaatattggagctgtgcctgctatcgagg |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
411708 |
agaacatcgcgtaggaagaaagcgcttatggctattggcgtcgatgaagagccaaataaggaagctcttgagaatattggagctgtgcctgctattgagg |
411807 |
T |
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| Q |
311 |
agtttgtgtttctca |
325 |
Q |
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||||||||||||||| |
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| T |
411808 |
agtttgtgtttctca |
411822 |
T |
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