View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13747_low_17 (Length: 209)
Name: NF13747_low_17
Description: NF13747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13747_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 32758180 - 32758350
Alignment:
| Q |
29 |
ttcattcattcagtgtaagtggacggacaatcgcaggcagacagagtagagagaaaacgatggcttgcaggcagttatgggcttcaagagcagcatcata |
128 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
32758180 |
ttcattcattcagtgtaagtggacaatcaatcgcaggcagacagagtagagagaaaaagatggcttgcaggcagttatgggcttcaagagcagcatcata |
32758279 |
T |
|
| Q |
129 |
cctcaggatctctctctttcacagaagcttctctaacggtattcattctttgatctctttttcatctcact |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32758280 |
cctcaggatctctctctttcacagaagcttctctaacggtattcattctttgatctctttttcatttcact |
32758350 |
T |
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