View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13747_low_9 (Length: 385)
Name: NF13747_low_9
Description: NF13747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13747_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 12 - 367
Target Start/End: Complemental strand, 31852973 - 31852617
Alignment:
| Q |
12 |
atgaagtaagtgctccatccgagtggaggtattgacacttgaaacagaagccagtattttggggcttgtttcggacgcaatcccaaataggcctttacat |
111 |
Q |
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| T |
31852973 |
atgaagtaagtgctccatccgagtggaggtattgacacttgaaacagaagccagtattttggggcttgtttcggacgcaatcccaaataggcctttacat |
31852874 |
T |
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| Q |
112 |
ataattttcttaaatctgttgtaacatcatccacatccacatactgtacttcaaccttattgccagatgaatctttcaccacaagattagcttcattaac |
211 |
Q |
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| T |
31852873 |
ataattttcttaaatctgttgtaacatcatccacatccacatactgtacttcaaccttattgcccgatgaatctttcaccacaagattagcttcattaac |
31852774 |
T |
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| Q |
212 |
ctgatgaaaattatcacctttagcatgata-tggaaatgttgtatattgcaatgtcacgagcaaatgatatattcttactggtattctgactatatcggt |
310 |
Q |
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| T |
31852773 |
ctgatgaaaattatcacctttagcatgatattggacatgttgtatatgacaatgtcacgagcaaatgatatattcttactggtattctgactatatcggt |
31852674 |
T |
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| Q |
311 |
acgattccatccaagggggttatacaccacaactacctggatacaaatcattaacat |
367 |
Q |
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| T |
31852673 |
acgattccatccaagggggttatacaccacaactacctggatacaaatcattaacat |
31852617 |
T |
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