View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1375-Insertion-15 (Length: 296)

Name: NF1375-Insertion-15
Description: NF1375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1375-Insertion-15
NF1375-Insertion-15
[»] chr3 (1 HSPs)
chr3 (8-296)||(51154245-51154532)


Alignment Details
Target: chr3 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 8 - 296
Target Start/End: Complemental strand, 51154532 - 51154245
Alignment:
Q  8 cgtaacacacttaacttccctaaaaagttgtacttatttgaactaacaaggtctcgtaggtttgtccataaacataatacattttagatcagttacccga 107  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  51154532 cgtaacacacttaacttccctaaaaagtcgtacttatttgaactaacaaggtctcgtaggtttgcccataaacataatacattttagatcagttacccga 51154433  T
Q  108 ttaaccgatttaaaaagtagtgaatggttcttaactaccgttcacttgcggactgtagttatctatcagtgaagtttagggcttgatgtgcttatgaaga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51154432 ttaaccgatttaaaaagtagtgaatggttcttaactaccgttcacttgcggactgtagttatctatcagtgaagtttagggcttgatgtgcttatgaaga 51154333  T
Q  208 atcctaggcgcctaaagaacaattttgaaattacatttacactatactgaaatagaatcgatatctcatactttgatggttattgttta 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51154332 atcctaggcgcctaaagaacaattttgaaattacatttacactatactgaaatagaatcgatatctcatac-ttgatggttattgttta 51154245  T

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