View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13750_low_2 (Length: 354)
Name: NF13750_low_2
Description: NF13750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13750_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 94 - 335
Target Start/End: Original strand, 29959662 - 29959903
Alignment:
| Q |
94 |
agtctacgagatcactgtcaaaatttaattatcagtatgatgcaattttctttttcagtgtgattattatcaaggtacagcaaaagaacaacaatgtccc |
193 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29959662 |
agtctacgagatcactgtcaaaatttaattatcaatgtgatgcaattttctttttcagtgtgattattatcaaggtacagcaaaagaacaacaatgtccc |
29959761 |
T |
|
| Q |
194 |
agacggcaagaaaagctcccaagaaagtcaattccattgatgtaagaccaaccatatatagttttaccaatgtgtaccaattaaagatcatcgatataaa |
293 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29959762 |
agacggcaagaaaagctcccaagaaagtcaattccgttgatgtaagaccaaccatatatagttttaccaatgtgtaccaattaaagatcatcgatataaa |
29959861 |
T |
|
| Q |
294 |
actgtcggtttaaatattgctaggtaaaaatgaagacaatgt |
335 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||| |
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| T |
29959862 |
actgtcggtttaaatattgctatgtaaaaatgaagacaatgt |
29959903 |
T |
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