View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13750_low_5 (Length: 208)
Name: NF13750_low_5
Description: NF13750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13750_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 9428841 - 9428671
Alignment:
| Q |
20 |
gctcttacatatcgaacctcacctacttccaatcacatgcctacaggtcacattggaaccaaaacgtgcccttccacgtcgggtagagactagagacaca |
119 |
Q |
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| T |
9428841 |
gctcctacatatcgaacctcaccaacttccaatcacatgcctacaggtcacattggaaccaaaacgtgcccttccacgtcgggtagagactagagaaaca |
9428742 |
T |
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| Q |
120 |
gcaagtgtaagcaatgcagcagccttgttttagtttttaaatatgagctgtttatttcatttaatggagta |
190 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
9428741 |
gcaagtgtaagcaatgcagcagccttgttttaatttttaaatatgagctgtttatttcatttaatggagta |
9428671 |
T |
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