View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13751_high_5 (Length: 390)

Name: NF13751_high_5
Description: NF13751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13751_high_5
NF13751_high_5
[»] chr1 (70 HSPs)
chr1 (9-371)||(34974648-34975009)
chr1 (256-371)||(34988608-34988724)
chr1 (201-371)||(34979508-34979667)
chr1 (134-182)||(41507207-41507255)
chr1 (134-181)||(40596067-40596114)
chr1 (144-181)||(30530608-30530645)
chr1 (134-182)||(40139125-40139173)
chr1 (134-181)||(27687532-27687579)
chr1 (134-181)||(43612093-43612140)
chr1 (134-181)||(49453491-49453538)
chr1 (134-181)||(50797791-50797838)
chr1 (136-182)||(5309066-5309112)
chr1 (85-123)||(21433287-21433325)
chr1 (140-182)||(48872047-48872089)
chr1 (144-181)||(9011645-9011682)
chr1 (140-181)||(19427521-19427562)
chr1 (144-181)||(42256460-42256497)
chr1 (140-181)||(42539418-42539459)
chr1 (144-181)||(48872984-48873021)
chr1 (134-178)||(5477176-5477220)
chr1 (134-182)||(16836128-16836176)
chr1 (144-180)||(18959005-18959041)
chr1 (87-123)||(29706592-29706628)
chr1 (134-182)||(32319321-32319369)
chr1 (145-181)||(40612114-40612150)
chr1 (134-181)||(1690446-1690493)
chr1 (134-181)||(8200087-8200134)
chr1 (140-183)||(11597646-11597689)
chr1 (144-183)||(32821633-32821672)
chr1 (134-181)||(33358171-33358218)
chr1 (134-181)||(43757599-43757646)
chr1 (134-181)||(45272173-45272220)
chr1 (134-181)||(46903481-46903528)
chr1 (134-181)||(48220156-48220203)
chr1 (142-181)||(48325799-48325838)
chr1 (144-179)||(50035571-50035606)
chr1 (144-186)||(20288374-20288416)
chr1 (144-182)||(28501446-28501484)
chr1 (144-182)||(30687051-30687089)
chr1 (144-178)||(39380853-39380887)
chr1 (134-180)||(45065914-45065960)
chr1 (87-121)||(50873547-50873581)
chr1 (134-180)||(51571416-51571462)
chr1 (140-181)||(10385427-10385468)
chr1 (144-181)||(10435832-10435869)
chr1 (144-181)||(11097918-11097955)
chr1 (144-181)||(11947795-11947832)
chr1 (145-182)||(13813557-13813594)
chr1 (144-181)||(18610773-18610810)
chr1 (144-181)||(19651410-19651447)
chr1 (144-181)||(21433435-21433472)
chr1 (144-181)||(27352630-27352667)
chr1 (144-181)||(29489393-29489430)
chr1 (144-181)||(31184281-31184318)
chr1 (144-181)||(35972838-35972875)
chr1 (148-181)||(39669806-39669839)
chr1 (87-124)||(41451773-41451810)
chr1 (146-183)||(41558002-41558039)
chr1 (144-181)||(45740578-45740615)
chr1 (144-181)||(49425738-49425775)
chr1 (144-181)||(50226913-50226950)
chr1 (134-183)||(50239177-50239226)
chr1 (134-182)||(16252772-16252820)
chr1 (134-182)||(18336157-18336205)
chr1 (134-182)||(34187274-34187322)
chr1 (134-186)||(35030775-35030827)
chr1 (148-180)||(36231744-36231776)
chr1 (91-123)||(43367794-43367826)
chr1 (145-181)||(52669803-52669839)
chr1 (144-180)||(52714979-52715015)
[»] chr3 (66 HSPs)
chr3 (194-307)||(22658125-22658239)
chr3 (307-371)||(22658040-22658105)
chr3 (134-181)||(47683801-47683848)
chr3 (134-182)||(30580132-30580180)
chr3 (134-181)||(43169766-43169813)
chr3 (134-181)||(50876375-50876422)
chr3 (144-182)||(462435-462473)
chr3 (144-182)||(11327107-11327145)
chr3 (144-181)||(8254027-8254064)
chr3 (144-189)||(14957828-14957873)
chr3 (144-181)||(48405410-48405447)
chr3 (144-181)||(49196696-49196733)
chr3 (140-181)||(52564664-52564705)
chr3 (144-184)||(2482708-2482748)
chr3 (134-182)||(28884490-28884538)
chr3 (144-184)||(29573390-29573430)
chr3 (83-131)||(33256447-33256495)
chr3 (144-184)||(37988629-37988669)
chr3 (134-182)||(46574086-46574134)
chr3 (144-180)||(47101523-47101559)
chr3 (144-184)||(51464306-51464346)
chr3 (134-181)||(1765404-1765451)
chr3 (134-181)||(11056935-11056982)
chr3 (328-371)||(22178872-22178915)
chr3 (134-181)||(23907000-23907047)
chr3 (134-181)||(46952949-46952996)
chr3 (84-123)||(46965986-46966025)
chr3 (134-181)||(48117347-48117394)
chr3 (134-181)||(49761319-49761366)
chr3 (135-181)||(3483132-3483178)
chr3 (144-182)||(19418191-19418229)
chr3 (145-183)||(20380924-20380962)
chr3 (144-178)||(32187144-32187178)
chr3 (144-182)||(53718048-53718086)
chr3 (144-181)||(1901960-1901997)
chr3 (144-181)||(1911406-1911443)
chr3 (144-181)||(3069608-3069645)
chr3 (144-181)||(7867745-7867782)
chr3 (144-181)||(18169157-18169194)
chr3 (144-181)||(32931952-32931989)
chr3 (148-181)||(33256309-33256342)
chr3 (148-181)||(35376589-35376622)
chr3 (144-181)||(36818956-36818993)
chr3 (144-181)||(36869871-36869908)
chr3 (144-181)||(36907048-36907085)
chr3 (90-123)||(39629730-39629763)
chr3 (144-181)||(43977019-43977056)
chr3 (140-181)||(44937219-44937260)
chr3 (144-181)||(45150300-45150337)
chr3 (134-183)||(45205286-45205335)
chr3 (86-131)||(46965806-46965851)
chr3 (144-177)||(47683936-47683969)
chr3 (144-189)||(50294146-50294191)
chr3 (144-181)||(50652388-50652425)
chr3 (148-181)||(53932429-53932462)
chr3 (140-181)||(55361252-55361293)
chr3 (145-181)||(20714243-20714279)
chr3 (327-371)||(21936607-21936651)
chr3 (134-182)||(23868991-23869039)
chr3 (142-178)||(31997816-31997852)
chr3 (154-186)||(32722189-32722221)
chr3 (134-182)||(43460380-43460428)
chr3 (140-180)||(43883314-43883354)
chr3 (83-123)||(45205423-45205463)
chr3 (145-181)||(48945847-48945883)
chr3 (145-181)||(55344331-55344367)
[»] chr4 (83 HSPs)
chr4 (134-182)||(32365680-32365728)
chr4 (144-183)||(18568849-18568888)
chr4 (84-131)||(35936104-35936151)
chr4 (134-180)||(28676165-28676211)
chr4 (144-185)||(925096-925137)
chr4 (144-185)||(39010171-39010212)
chr4 (134-183)||(39241314-39241363)
chr4 (134-181)||(28480551-28480598)
chr4 (134-181)||(28481425-28481472)
chr4 (134-181)||(28482300-28482347)
chr4 (134-181)||(54036542-54036589)
chr4 (140-182)||(37547064-37547106)
chr4 (144-182)||(48099810-48099848)
chr4 (144-181)||(169536-169573)
chr4 (145-182)||(30042133-30042170)
chr4 (134-183)||(30778277-30778326)
chr4 (140-181)||(32621638-32621679)
chr4 (134-183)||(39684634-39684683)
chr4 (140-181)||(41119500-41119541)
chr4 (141-182)||(45764419-45764460)
chr4 (140-181)||(46173550-46173591)
chr4 (144-181)||(51359824-51359861)
chr4 (134-181)||(2109443-2109490)
chr4 (134-181)||(4511825-4511872)
chr4 (144-183)||(11997683-11997722)
chr4 (141-184)||(12387685-12387728)
chr4 (144-183)||(23220333-23220372)
chr4 (144-183)||(26885289-26885328)
chr4 (134-181)||(27384187-27384234)
chr4 (134-181)||(28657453-28657500)
chr4 (134-181)||(31657658-31657705)
chr4 (142-181)||(33093136-33093175)
chr4 (146-181)||(34259815-34259850)
chr4 (134-181)||(42490920-42490967)
chr4 (134-181)||(43769723-43769770)
chr4 (134-181)||(46686245-46686291)
chr4 (140-186)||(1840590-1840636)
chr4 (144-182)||(3475868-3475906)
chr4 (144-186)||(3968880-3968922)
chr4 (134-180)||(5386385-5386431)
chr4 (144-182)||(7037518-7037556)
chr4 (144-186)||(11064123-11064165)
chr4 (144-178)||(12694462-12694496)
chr4 (155-189)||(14090095-14090129)
chr4 (145-183)||(15596394-15596432)
chr4 (140-182)||(48563750-48563792)
chr4 (144-181)||(1796366-1796403)
chr4 (144-181)||(4896534-4896571)
chr4 (144-181)||(5208361-5208398)
chr4 (145-182)||(6370979-6371016)
chr4 (144-181)||(8026787-8026824)
chr4 (144-181)||(9162066-9162103)
chr4 (148-181)||(10994190-10994223)
chr4 (144-181)||(11012141-11012178)
chr4 (148-181)||(13267516-13267549)
chr4 (144-181)||(20632682-20632719)
chr4 (144-181)||(24088598-24088635)
chr4 (144-185)||(24772667-24772708)
chr4 (86-123)||(26712501-26712538)
chr4 (144-181)||(34116574-34116611)
chr4 (144-181)||(35017153-35017190)
chr4 (144-181)||(39449173-39449210)
chr4 (144-181)||(41154048-41154085)
chr4 (140-181)||(41262648-41262689)
chr4 (148-181)||(43168752-43168785)
chr4 (144-181)||(47014939-47014976)
chr4 (144-181)||(47998594-47998631)
chr4 (144-181)||(51377327-51377364)
chr4 (144-181)||(55268035-55268072)
chr4 (134-182)||(4974110-4974158)
chr4 (134-182)||(15515794-15515842)
chr4 (144-180)||(17367446-17367482)
chr4 (134-182)||(24310534-24310582)
chr4 (145-181)||(27001444-27001480)
chr4 (134-182)||(28899228-28899276)
chr4 (134-178)||(29974340-29974384)
chr4 (134-182)||(36413339-36413387)
chr4 (83-123)||(44539880-44539920)
chr4 (134-178)||(48326555-48326599)
chr4 (145-181)||(51717317-51717353)
chr4 (144-184)||(51887660-51887700)
chr4 (142-182)||(54771592-54771632)
chr4 (84-120)||(54974620-54974656)
[»] chr5 (52 HSPs)
chr5 (142-189)||(16143382-16143429)
chr5 (144-189)||(6420664-6420709)
chr5 (134-181)||(372733-372780)
chr5 (134-181)||(6865800-6865847)
chr5 (134-181)||(14206400-14206447)
chr5 (144-182)||(42699056-42699094)
chr5 (144-181)||(14914372-14914409)
chr5 (144-184)||(3263542-3263582)
chr5 (144-184)||(27440476-27440516)
chr5 (134-178)||(33567236-33567280)
chr5 (144-183)||(9599762-9599801)
chr5 (144-183)||(12718414-12718453)
chr5 (144-183)||(12779640-12779679)
chr5 (134-181)||(13734373-13734420)
chr5 (134-181)||(14508181-14508228)
chr5 (144-183)||(15639383-15639422)
chr5 (134-185)||(30334779-30334830)
chr5 (144-183)||(34381010-34381049)
chr5 (142-181)||(36548412-36548451)
chr5 (135-182)||(38036711-38036758)
chr5 (144-183)||(39788740-39788779)
chr5 (144-183)||(41460114-41460153)
chr5 (144-182)||(30574411-30574449)
chr5 (149-183)||(30776634-30776668)
chr5 (134-180)||(33910101-33910147)
chr5 (144-182)||(39595271-39595309)
chr5 (140-182)||(41210532-41210574)
chr5 (144-186)||(41621962-41622004)
chr5 (144-181)||(2629818-2629855)
chr5 (144-181)||(3771040-3771077)
chr5 (144-181)||(7077376-7077413)
chr5 (144-181)||(9594478-9594515)
chr5 (144-181)||(18695318-18695355)
chr5 (145-182)||(19127123-19127160)
chr5 (134-183)||(19952009-19952058)
chr5 (148-181)||(28501592-28501625)
chr5 (144-181)||(28811429-28811466)
chr5 (134-175)||(31284407-31284448)
chr5 (144-189)||(32360521-32360566)
chr5 (144-181)||(35814453-35814490)
chr5 (148-181)||(38500943-38500976)
chr5 (134-178)||(1839357-1839401)
chr5 (134-178)||(4098626-4098670)
chr5 (144-180)||(8009904-8009940)
chr5 (134-182)||(16202730-16202778)
chr5 (145-181)||(23991169-23991205)
chr5 (145-181)||(26660446-26660482)
chr5 (145-181)||(26932038-26932074)
chr5 (145-181)||(36713213-36713249)
chr5 (144-180)||(41173253-41173289)
chr5 (134-178)||(41865632-41865676)
chr5 (83-131)||(42475557-42475605)
[»] chr8 (54 HSPs)
chr8 (144-181)||(6849295-6849332)
chr8 (142-186)||(1796491-1796535)
chr8 (134-181)||(5502371-5502418)
chr8 (134-181)||(37392141-37392188)
chr8 (144-182)||(38844824-38844862)
chr8 (145-182)||(21273745-21273782)
chr8 (135-180)||(44607702-44607747)
chr8 (134-178)||(157070-157114)
chr8 (134-178)||(11138910-11138954)
chr8 (134-178)||(14710906-14710950)
chr8 (135-182)||(9047084-9047131)
chr8 (142-181)||(12732842-12732881)
chr8 (134-181)||(30439518-30439565)
chr8 (140-187)||(37524447-37524494)
chr8 (134-181)||(40413362-40413409)
chr8 (134-181)||(41934992-41935039)
chr8 (140-182)||(1370304-1370346)
chr8 (144-186)||(7129528-7129570)
chr8 (140-186)||(16487605-16487651)
chr8 (134-180)||(32020478-32020524)
chr8 (144-182)||(35937546-35937584)
chr8 (134-180)||(39211054-39211100)
chr8 (148-182)||(43873729-43873763)
chr8 (147-181)||(44380651-44380685)
chr8 (144-181)||(1739808-1739845)
chr8 (88-125)||(2621925-2621962)
chr8 (144-181)||(5771910-5771947)
chr8 (144-181)||(10644836-10644873)
chr8 (144-181)||(12045687-12045724)
chr8 (144-181)||(20288533-20288570)
chr8 (144-181)||(21075162-21075199)
chr8 (144-181)||(26294189-26294226)
chr8 (144-181)||(26307446-26307483)
chr8 (144-181)||(28927681-28927718)
chr8 (144-181)||(35500987-35501024)
chr8 (144-181)||(36064030-36064067)
chr8 (144-181)||(36497661-36497698)
chr8 (144-181)||(38128810-38128847)
chr8 (144-181)||(39021477-39021514)
chr8 (144-181)||(41293755-41293792)
chr8 (140-181)||(41541869-41541910)
chr8 (144-181)||(45101396-45101433)
chr8 (140-180)||(895935-895975)
chr8 (145-181)||(1065417-1065453)
chr8 (89-121)||(5491417-5491449)
chr8 (144-180)||(6806909-6806945)
chr8 (144-180)||(10553833-10553869)
chr8 (145-181)||(11223894-11223930)
chr8 (144-184)||(22767129-22767169)
chr8 (145-181)||(22852874-22852910)
chr8 (144-184)||(25830280-25830320)
chr8 (134-178)||(26000552-26000596)
chr8 (148-180)||(27127657-27127689)
chr8 (140-180)||(32954853-32954893)
[»] chr2 (52 HSPs)
chr2 (140-181)||(29795447-29795488)
chr2 (134-181)||(9834094-9834141)
chr2 (144-178)||(19529545-19529579)
chr2 (144-186)||(30487503-30487545)
chr2 (134-183)||(7121388-7121437)
chr2 (144-181)||(36909877-36909914)
chr2 (134-183)||(45202145-45202194)
chr2 (134-182)||(24727425-24727473)
chr2 (134-182)||(25801826-25801874)
chr2 (134-181)||(3012858-3012905)
chr2 (147-182)||(4344448-4344483)
chr2 (134-181)||(6215257-6215304)
chr2 (134-181)||(6646835-6646882)
chr2 (134-181)||(8482245-8482292)
chr2 (134-181)||(13538263-13538310)
chr2 (148-179)||(17267690-17267721)
chr2 (142-181)||(22353196-22353235)
chr2 (140-187)||(25086329-25086376)
chr2 (144-183)||(28165127-28165166)
chr2 (140-179)||(33417235-33417274)
chr2 (134-181)||(37966367-37966414)
chr2 (144-187)||(39233736-39233779)
chr2 (144-182)||(15123970-15124008)
chr2 (144-182)||(28277801-28277839)
chr2 (144-182)||(30856806-30856844)
chr2 (147-181)||(31296882-31296916)
chr2 (144-182)||(34134805-34134843)
chr2 (134-180)||(44105115-44105161)
chr2 (140-181)||(694280-694321)
chr2 (144-181)||(3299139-3299176)
chr2 (144-181)||(4738606-4738643)
chr2 (144-181)||(5031923-5031960)
chr2 (86-123)||(14255449-14255486)
chr2 (142-179)||(17264096-17264133)
chr2 (144-177)||(28508483-28508516)
chr2 (144-181)||(29168725-29168762)
chr2 (148-181)||(33002819-33002852)
chr2 (144-181)||(33296105-33296142)
chr2 (148-181)||(35171264-35171297)
chr2 (144-181)||(36435681-36435718)
chr2 (144-181)||(37767800-37767837)
chr2 (144-181)||(39247497-39247534)
chr2 (140-181)||(42283269-42283310)
chr2 (144-181)||(44018282-44018319)
chr2 (85-125)||(433994-434034)
chr2 (149-181)||(1489652-1489684)
chr2 (134-182)||(6511569-6511617)
chr2 (144-180)||(26321731-26321767)
chr2 (144-180)||(26321899-26321935)
chr2 (138-182)||(27538933-27538977)
chr2 (134-178)||(32972919-32972963)
chr2 (144-176)||(44018068-44018100)
[»] chr6 (40 HSPs)
chr6 (141-181)||(30945823-30945863)
chr6 (144-182)||(29376749-29376787)
chr6 (144-181)||(3339533-3339570)
chr6 (140-181)||(5028284-5028325)
chr6 (134-183)||(12177575-12177624)
chr6 (144-180)||(32621802-32621838)
chr6 (134-182)||(32644622-32644670)
chr6 (134-181)||(2241831-2241878)
chr6 (134-181)||(12441538-12441585)
chr6 (133-180)||(16352172-16352219)
chr6 (152-187)||(25554239-25554274)
chr6 (152-187)||(25995436-25995471)
chr6 (152-187)||(26094899-26094934)
chr6 (134-181)||(28748124-28748171)
chr6 (134-181)||(31417320-31417367)
chr6 (134-181)||(32149500-32149547)
chr6 (135-182)||(33527434-33527481)
chr6 (144-182)||(32457286-32457324)
chr6 (140-181)||(1897697-1897738)
chr6 (144-181)||(2056783-2056820)
chr6 (144-181)||(3088973-3089010)
chr6 (144-181)||(9954548-9954585)
chr6 (148-181)||(11785355-11785388)
chr6 (144-181)||(12044332-12044369)
chr6 (144-181)||(15666807-15666844)
chr6 (144-181)||(15722537-15722574)
chr6 (144-181)||(25127867-25127904)
chr6 (144-181)||(27334858-27334895)
chr6 (144-181)||(27395598-27395635)
chr6 (144-181)||(28965874-28965911)
chr6 (144-181)||(30956083-30956120)
chr6 (134-183)||(32135444-32135493)
chr6 (144-181)||(32729889-32729926)
chr6 (144-173)||(32905757-32905786)
chr6 (134-182)||(2163701-2163749)
chr6 (134-182)||(2175334-2175382)
chr6 (144-180)||(6435037-6435073)
chr6 (142-182)||(7611494-7611534)
chr6 (134-182)||(16121162-16121210)
chr6 (134-178)||(28549034-28549078)
[»] scaffold0054 (1 HSPs)
scaffold0054 (134-181)||(31613-31660)
[»] chr7 (49 HSPs)
chr7 (134-181)||(2469703-2469750)
chr7 (134-181)||(22330644-22330691)
chr7 (134-189)||(25887586-25887641)
chr7 (134-181)||(37352003-37352050)
chr7 (144-187)||(41080120-41080163)
chr7 (144-182)||(2347093-2347131)
chr7 (144-182)||(33050182-33050220)
chr7 (134-180)||(46725618-46725664)
chr7 (144-181)||(4971290-4971327)
chr7 (144-181)||(19426580-19426617)
chr7 (144-181)||(37856188-37856225)
chr7 (144-181)||(47530325-47530362)
chr7 (144-181)||(49128723-49128760)
chr7 (134-181)||(2323304-2323351)
chr7 (144-183)||(6427208-6427247)
chr7 (134-181)||(26041321-26041368)
chr7 (134-181)||(28862094-28862141)
chr7 (144-183)||(29763828-29763867)
chr7 (144-183)||(34654565-34654604)
chr7 (134-181)||(34992348-34992395)
chr7 (134-181)||(39875822-39875869)
chr7 (134-181)||(41985113-41985160)
chr7 (134-181)||(43444635-43444682)
chr7 (134-180)||(7817650-7817696)
chr7 (144-186)||(28109952-28109994)
chr7 (143-181)||(34264594-34264632)
chr7 (144-182)||(42663083-42663121)
chr7 (144-181)||(116631-116668)
chr7 (148-185)||(6353721-6353758)
chr7 (144-181)||(13437198-13437235)
chr7 (144-181)||(20406541-20406578)
chr7 (144-181)||(22692084-22692121)
chr7 (144-181)||(30864451-30864488)
chr7 (144-181)||(31274563-31274600)
chr7 (148-181)||(32919018-32919051)
chr7 (145-178)||(33223564-33223597)
chr7 (144-181)||(37392043-37392080)
chr7 (144-181)||(41227067-41227104)
chr7 (144-181)||(44511139-44511176)
chr7 (144-177)||(49014291-49014324)
chr7 (140-180)||(3062343-3062383)
chr7 (134-182)||(8459613-8459661)
chr7 (134-178)||(21839146-21839190)
chr7 (144-180)||(22816951-22816987)
chr7 (142-178)||(23680059-23680095)
chr7 (144-180)||(23910285-23910321)
chr7 (144-180)||(30818031-30818067)
chr7 (144-180)||(37325853-37325889)
chr7 (144-180)||(43171207-43171243)
[»] scaffold0194 (1 HSPs)
scaffold0194 (142-181)||(29793-29832)
[»] scaffold0100 (1 HSPs)
scaffold0100 (134-181)||(44786-44833)
[»] scaffold0252 (1 HSPs)
scaffold0252 (144-178)||(8009-8043)
[»] scaffold0026 (1 HSPs)
scaffold0026 (144-182)||(113624-113662)
[»] scaffold0011 (2 HSPs)
scaffold0011 (144-186)||(18590-18632)
scaffold0011 (144-181)||(219698-219735)
[»] scaffold0662 (1 HSPs)
scaffold0662 (144-181)||(1078-1115)
[»] scaffold0184 (1 HSPs)
scaffold0184 (144-181)||(16628-16665)
[»] scaffold0154 (1 HSPs)
scaffold0154 (144-181)||(19725-19762)
[»] scaffold0148 (1 HSPs)
scaffold0148 (134-183)||(21469-21518)
[»] scaffold0078 (1 HSPs)
scaffold0078 (144-181)||(56179-56216)
[»] scaffold0049 (1 HSPs)
scaffold0049 (144-181)||(72203-72240)
[»] scaffold0032 (1 HSPs)
scaffold0032 (148-181)||(35991-36024)
[»] scaffold0003 (1 HSPs)
scaffold0003 (144-181)||(337118-337155)
[»] scaffold0592 (1 HSPs)
scaffold0592 (145-181)||(8342-8378)
[»] scaffold0286 (1 HSPs)
scaffold0286 (134-182)||(18660-18708)
[»] scaffold0131 (1 HSPs)
scaffold0131 (144-180)||(15568-15604)


Alignment Details
Target: chr1 (Bit Score: 311; Significance: 1e-175; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 9 - 371
Target Start/End: Original strand, 34974648 - 34975009
Alignment:
Q  9 gattatactaatactgtttgattgcccctatagatgatgtgtagctcgttttttaacagatttggtacgataagtaagaggtgtgttatttgaacaatca 108  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34974648 gattatactaatactgtttgattacccctacagatgatgtgtagctcgttttttaacagatttggtacgataagtaagaggtgtgttatttgaacaatca 34974747  T
Q  109 tttatgtgacaacttataggacatttatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaataattactatcaacttgctcaaaat 208  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  34974748 tttatgtgacaacttataagacatttatcatagagaaagttgtcacaaaatggttgtataaatatcatttctcgataattattatcaacttgctcaaaat 34974847  T
Q  209 attatttacctaggactaagggaaactccgtcttccactgactgcatagattgcactaaacaagtctcagttatgagtaactttaatcttcatctcacag 308  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  34974848 attatttacctaagactaagggaaactccgtcttccagtgactgcatagattgcactaaactagtctcagttatgagtaactttaatc-tcatctcacag 34974946  T
Q  309 aataacaaaaaatctcacaatggcagaaatagcagtgtcttttgctattaaccaactgcttcc 371  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34974947 aataacaaaaaatatcacaatggcagaaatagcagtgtcttttgctattgaccaactgcttcc 34975009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 256 - 371
Target Start/End: Original strand, 34988608 - 34988724
Alignment:
Q  256 agattgcactaaacaagtctcagttatgagtaactt-taatcttcatctcacagaataacaaaaaatctcacaatggcagaaatagcagtgtcttttgct 354  Q
    ||||||||| |||||||||||| ||| |||||| || || ||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  34988608 agattgcaccaaacaagtctcaattacgagtaaattgtagtcttcgtctcatagaataacaaaaaatcttacaatggcagaaatggcagtgtcttttgct 34988707  T
Q  355 attaaccaactgcttcc 371  Q
    ||||| |||||||||||    
T  34988708 attaagcaactgcttcc 34988724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 371
Target Start/End: Original strand, 34979508 - 34979667
Alignment:
Q  201 ctcaaaatattatttacctaggactaagggaaactccgtcttccactgactgcatagattgcactaaacaagtctcagttatgagtaactttaatcttca 300  Q
    |||||||||||||||| | ||||||||||||||||| |||||||| | || ||| ||||||||||| ||||||             || | || |||||     
T  34979508 ctcaaaatattatttaacaaggactaagggaaactcagtcttccattaaccgcaaagattgcactacacaagta------------aattgtagtcttct 34979595  T
Q  301 tctcacagaataacaaaaaatctcacaa-tggcagaaatagcagtgtcttttgctattaaccaactgcttcc 371  Q
    |||||||||||| |||||| |||||||| |||||||||  |||||||||||||||||| |||||||||||||    
T  34979596 tctcacagaatatcaaaaattctcacaaatggcagaaaaggcagtgtcttttgctattgaccaactgcttcc 34979667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 41507207 - 41507255
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  41507207 tatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctca 41507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 40596067 - 40596114
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  40596067 tatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 40596114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 30530608 - 30530645
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30530608 aaagttgtcacaaaatggttgtataaatatcatttctc 30530645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 40139173 - 40139125
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  40139173 tatgagagagaaagttgtcataaaatggttgtacaaatatcatttctca 40139125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 27687532 - 27687579
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  27687532 tatgagagataaagttgtcacaaaatggttgtacaaatatcatttctc 27687579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 43612093 - 43612140
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  43612093 tatgagagagaaagttgtcataaaatggttgtacaaatatcatttctc 43612140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 49453538 - 49453491
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  49453538 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 49453491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 50797838 - 50797791
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  50797838 tatgagagagaaagttgtcacaaaatgattgtacaaatatcatttctc 50797791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 5309066 - 5309112
Alignment:
Q  136 tgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||    
T  5309066 tgatagaggaagttgtcacaaagtggttgtacaaatatcatttctca 5309112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 21433287 - 21433325
Alignment:
Q  85 agaggtgtgttatttgaacaatcatttatgtgacaactt 123  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  21433287 agaggtgtgttatttgaacaatcatttgtgtgacaactt 21433325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 48872047 - 48872089
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  48872047 agagaaagttgtcaaaaaatggttgtacaaatatcatttctca 48872089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 9011682 - 9011645
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttctc 9011645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 19427562 - 19427521
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  19427562 agagaaagttgtaccaaaatggttgtataaatatcatttctc 19427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 42256497 - 42256460
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  42256497 aaagttgtcacaaaatggttgtacaaatatcatttctc 42256460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 42539459 - 42539418
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||||||| ||||||||||||||    
T  42539459 agagaaagttgtcacataatggttgtacaaatatcatttctc 42539418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 48872984 - 48873021
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||||||||||||||||||    
T  48872984 aaagttgtcacaaagtggttgtataaatatcatttctc 48873021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 5477176 - 5477220
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||    
T  5477176 tatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 16836128 - 16836176
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||| ||||||||||||||||| ||||| |||||||||||||||    
T  16836128 tatgagagaaaaagttgtcacaaaatgattgtacaaatatcatttctca 16836176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 18959041 - 18959005
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||| ||||||||||||||||||||||||||||    
T  18959041 aaagttgtaacaaaatggttgtataaatatcatttct 18959005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 29706592 - 29706628
Alignment:
Q  87 aggtgtgttatttgaacaatcatttatgtgacaactt 123  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29706592 aggtgtgttatttgaacaatcatttctgtgacaactt 29706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 32319321 - 32319369
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||||||||| |||||| ||| ||||||||||||||||    
T  32319321 tatgagagagaaagttgtcaccaaatggatgtttaaatatcatttctca 32319369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 40612150 - 40612114
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||| ||||||||||||||    
T  40612150 aagttgtcacaaaatggttgtacaaatatcatttctc 40612114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 1690493 - 1690446
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||| ||||||||||||||||||||||| |||||| |||||||    
T  1690493 tatgagagaaaaagttgtcacaaaatggttgtacaaatattatttctc 1690446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 8200134 - 8200087
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  8200134 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 8200087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 11597689 - 11597646
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||||||||| |||||||| | ||||||||||||||    
T  11597689 agagaaagttgtcacaaattggttgtacagatatcatttctcaa 11597646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 32821672 - 32821633
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  32821672 aaagttgtcacaaagtggttgtacaaatatcatttctcaa 32821633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 33358171 - 33358218
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  33358171 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 33358218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 43757646 - 43757599
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||  ||||||||||||| ||||||||||||||    
T  43757646 tatgaaagagaaagttgtatcaaaatggttgtacaaatatcatttctc 43757599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 45272173 - 45272220
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  45272173 tatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctc 45272220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 46903528 - 46903481
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||  ||||||||||||| ||||||||||||||    
T  46903528 tatgagagagaaagttgtatcaaaatggttgtacaaatatcatttctc 46903481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 48220156 - 48220203
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  48220156 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 48220203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 48325799 - 48325838
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  48325799 agaaaattgtcacaaaatggttgtacaaatatcatttctc 48325838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 50035571 - 50035606
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttc 179  Q
    ||||||||||||||||||||||| ||||||||||||    
T  50035571 aaagttgtcacaaaatggttgtacaaatatcatttc 50035606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 20288374 - 20288416
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||||||||| ||| |||| |||||||||||||||||||    
T  20288374 aaagttgtcacaaattggatgtacaaatatcatttctcaataa 20288416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 28501484 - 28501446
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  28501484 aaagttgtcaaaaaatggttgtataaatatcattcctca 28501446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 30687089 - 30687051
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  30687089 aaagttgtcactaaatggttgtacaaatatcatttctca 30687051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 39380853 - 39380887
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcattt 178  Q
    |||||||||| ||||||||||||||||||||||||    
T  39380853 aaagttgtcataaaatggttgtataaatatcattt 39380887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 45065914 - 45065960
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| |||||||||||||||||||||| |||  |||||||||||||    
T  45065914 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 45065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 50873547 - 50873581
Alignment:
Q  87 aggtgtgttatttgaacaatcatttatgtgacaac 121  Q
    |||||| ||||||||||||||||||||||||||||    
T  50873547 aggtgttttatttgaacaatcatttatgtgacaac 50873581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 51571462 - 51571416
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  51571462 tatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttct 51571416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 10385468 - 10385427
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||  ||||||||||||| ||||||||||||||    
T  10385468 agagaaagttgtagcaaaatggttgtacaaatatcatttctc 10385427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 10435832 - 10435869
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||||  |||||||||||||    
T  10435832 aaagttgtcacaaaatggttgtacgaatatcatttctc 10435869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 11097918 - 11097955
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  11097918 aaagttgtcacaaaatggatgtacaaatatcatttctc 11097955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 11947832 - 11947795
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  11947832 aaagttgtcataaaatggttgtacaaatatcatttctc 11947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 13813594 - 13813557
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  13813594 aagttgtcacaaattggttgtacaaatatcatttctca 13813557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 18610810 - 18610773
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  18610810 aaagttgtcacaaaatagttgtacaaatatcatttctc 18610773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 19651447 - 19651410
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||||  |||||||||||||    
T  19651447 aaagttgtcacaaaatggttgtaggaatatcatttctc 19651410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 21433435 - 21433472
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  21433435 aaagttgttacaaaatggttgtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 27352667 - 27352630
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  27352667 aaagttatcacaaaatggttgtacaaatatcatttctc 27352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 29489393 - 29489430
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  29489393 aaagttatcacaaaatggttgtacaaatatcatttctc 29489430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 31184318 - 31184281
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  31184318 aaagttgtcataaaatggttgtacaaatatcatttctc 31184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 35972838 - 35972875
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  35972838 aaagttgtcacaaaatggttgaacaaatatcatttctc 35972875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 39669839 - 39669806
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  39669839 ttgtcacaaaatggttgtacaaatatcatttctc 39669806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 41451810 - 41451773
Alignment:
Q  87 aggtgtgttatttgaacaatcatttatgtgacaactta 124  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  41451810 aggtgtgttatttgaacaaccatttatatgacaactta 41451773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 183
Target Start/End: Complemental strand, 41558039 - 41558002
Alignment:
Q  146 agttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  41558039 agttgtcacaaaatggttgtacaaatatcatttgtcaa 41558002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 45740578 - 45740615
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  45740578 aaagttgtcacaaagtggttgtacaaatatcatttctc 45740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 49425775 - 49425738
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  49425775 aaagttgtcacaaagtggttgtacaaatatcatttctc 49425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 50226913 - 50226950
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  50226913 aaagttgtcacaaagtggttgtacaaatatcatttctc 50226950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 50239177 - 50239226
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| ||| ||| ||||||||||||||||||  ||||||||||||||||    
T  50239177 tatgagagataaaattgtcacaaaatggttgtcaaaatatcatttctcaa 50239226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 16252772 - 16252820
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||||||   |||||||||||| |||||||||||||||    
T  16252772 tatgaaagagaaagttgtacaaaaatggttgtacaaatatcatttctca 16252820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 18336205 - 18336157
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||||||||||||||  |||  |||||||||||||||    
T  18336205 tatgagagagaaagttgtcacaaaatgaatgttcaaatatcatttctca 18336157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 34187322 - 34187274
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||| ||||||| || |||||| |||||||||||||||    
T  34187322 tatgaaagagaaagtggtcacaagatagttgtacaaatatcatttctca 34187274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 35030775 - 35030827
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    ||||| ||||||||||||   |||||||||||| ||||| |||||||||||||    
T  35030775 tatgagagagaaagttgtacaaaaatggttgtacaaataacatttctcaataa 35030827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 36231744 - 36231776
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||||||||||||||||| |||||||||||||    
T  36231744 ttgtcacaaaatggttgtacaaatatcatttct 36231776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 43367794 - 43367826
Alignment:
Q  91 gtgttatttgaacaatcatttatgtgacaactt 123  Q
    ||||||||||||||||||||| |||||||||||    
T  43367794 gtgttatttgaacaatcatttgtgtgacaactt 43367826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 52669803 - 52669839
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||| |||||||| |||||    
T  52669803 aagttgtcacaaaatggttgtacaaatatcacttctc 52669839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 52715015 - 52714979
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  52715015 aaagttgtcacaaaatgattgtacaaatatcatttct 52714979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 22658239 - 22658125
Alignment:
Q  194 caacttgctcaaaatattatttacctaggactaagggaaactccgtcttccactgactgcatagattgcactaaacaagtctcagttatgagtaactt-t 292  Q
    |||||||||||||| ||||| || | |||||  |||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||| |||||| || |    
T  22658239 caacttgctcaaaaaattatgtaacaaggacatagggaaactcagtcttccactaactacatagattgcactaaacaagtctcaattaggagtaaattgt 22658140  T
Q  293 aatcttcatctcaca 307  Q
    | |||||||||||||    
T  22658139 agtcttcatctcaca 22658125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 22658105 - 22658040
Alignment:
Q  307 agaataacaaaaaa-tctcacaatggcagaaatagcagtgtcttttgctattaaccaactgcttcc 371  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||| |||||||    
T  22658105 agaataacaaaaaaatctcataatggcagaaatagcggtgtcttttgctattgaccaattgcttcc 22658040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 47683848 - 47683801
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  47683848 tatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 47683801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 30580180 - 30580132
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  30580180 tatgaaagataaagttgtcataaaatggttgtataaatatcatttctca 30580132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 43169766 - 43169813
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  43169766 tatgagagaaaaagttgtcacaaaatggttgtacaaatatcatttctc 43169813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 50876375 - 50876422
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  50876375 tatgatagagaaagttgtcaaaaaattgttgtacaaatatcatttctc 50876422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 462435 - 462473
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  462435 aaagttgtcacaaaatggttgtacaaatatcatttctca 462473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 11327145 - 11327107
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  11327145 aaagttgtcacaaaatggttgtacaaatatcatttctca 11327107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 8254064 - 8254027
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  8254064 aaagttgtcacaaaatggttgtacaaatatcatttctc 8254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 14957873 - 14957828
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataatta 189  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||    
T  14957873 aaagttgtcacaaagtggttgtacaaatatcatttctcaaaaatta 14957828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 48405447 - 48405410
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  48405447 aaagttgtcacaaaatggttgtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 49196733 - 49196696
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  49196733 aaagttgtcacaaaatggttgtacaaatatcatttctc 49196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 52564664 - 52564705
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  52564664 agagaaaattgtcacaaaatggttgtacaaatatcatttctc 52564705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 2482708 - 2482748
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  2482708 aaagttgtcacaaaatggatgtacaaatatcatttctcaat 2482748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 28884538 - 28884490
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  28884538 tatgagagagaaagttgtcacataatggttgtacaaatattatttctca 28884490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 29573390 - 29573430
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  29573390 aaagttgttacaaaatggttgtacaaatatcatttctcaat 29573430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 33256495 - 33256447
Alignment:
Q  83 taagaggtgtgttatttgaacaatcatttatgtgacaacttataggaca 131  Q
    |||||| |||||||||||||||| ||||| ||||||||||| |||||||    
T  33256495 taagagatgtgttatttgaacaaccatttgtgtgacaacttttaggaca 33256447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 37988669 - 37988629
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  37988669 aaagttgtcacaaaatagttatataaatatcatttctcaat 37988629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 46574134 - 46574086
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||  |||||||||||||||| |||||||||||||||    
T  46574134 tatgagagagaaagtgttcacaaaatggttgtacaaatatcatttctca 46574086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 47101559 - 47101523
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||||||||||||||||||||| |||||||||||||    
T  47101559 aaagttgtcacaaaatggttgtacaaatatcatttct 47101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 51464306 - 51464346
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  51464306 aaagttgtcacaaagtggttgtacaaatatcatttctcaat 51464346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 1765451 - 1765404
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||  |||| ||||||||||||||    
T  1765451 tatgagagagaaagttgtcacaaaatgaatgtacaaatatcatttctc 1765404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 11056935 - 11056982
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||||| |||||| ||||||||||||||    
T  11056935 tatgaaagagaaagttgtcaaaaaattgttgtacaaatatcatttctc 11056982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 371
Target Start/End: Original strand, 22178872 - 22178915
Alignment:
Q  328 atggcagaaatagcagtgtcttttgctattaaccaactgcttcc 371  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||    
T  22178872 atggcagaaatggcagtttcttttgctattgaccaactgcttcc 22178915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 23907000 - 23907047
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||||||||    
T  23907000 tatgagagagaaagttgtaacataatggttgtacaaatatcatttctc 23907047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 46952996 - 46952949
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||| ||| |||||||||||| ||||||||||||||    
T  46952996 tatgagagagaaagttatcaaaaaatggttgtacaaatatcatttctc 46952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 46965986 - 46966025
Alignment:
Q  84 aagaggtgtgttatttgaacaatcatttatgtgacaactt 123  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  46965986 aagaggtgtgttatttgaacaaccatttgtgtgacaactt 46966025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 48117394 - 48117347
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||   |||||||||||||||||||||||||||    
T  48117394 tatgaaagagaaagttgtacaaaaatggttgtataaatatcatttctc 48117347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 49761366 - 49761319
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  49761366 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 49761319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 3483178 - 3483132
Alignment:
Q  135 atgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||| ||||||||| |||||||| |||||||| ||||||||||||||    
T  3483178 atgagagagaaagtcgtcacaaagtggttgtacaaatatcatttctc 3483132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 19418191 - 19418229
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  19418191 aaagttgtcataaaatggttgtacaaatatcatttctca 19418229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 20380924 - 20380962
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  20380924 aagttgtcacaaagtggttgtacaaatatcatttctcaa 20380962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 32187178 - 32187144
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||||||||||||||||||||| |||||||||||    
T  32187178 aaagttgtcacaaaatggttgtacaaatatcattt 32187144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 53718086 - 53718048
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  53718086 aaagttgtcacaaaatggatgtttaaatatcatttctca 53718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 1901960 - 1901997
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  1901960 aaagttgtcacaaagtggttgtacaaatatcatttctc 1901997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 1911406 - 1911443
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  1911406 aaagttgtcacaaagtggttgtacaaatatcatttctc 1911443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 3069608 - 3069645
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  3069608 aaagttgtcacaaattggttgtacaaatatcatttctc 3069645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 7867745 - 7867782
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  7867745 aaagttgtcacaaaatagttgtacaaatatcatttctc 7867782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 18169194 - 18169157
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  18169194 aaagttgtcacaaagtggttgtacaaatatcatttctc 18169157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 32931952 - 32931989
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  32931952 aaagttgtcacaaattggttgtacaaatatcatttctc 32931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 33256342 - 33256309
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||||||||||||||||||    
T  33256342 ttgtctcaaaatggttgtataaatatcatttctc 33256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 35376589 - 35376622
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  35376589 ttgtcacaaaatggttgtacaaatatcatttctc 35376622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 36818993 - 36818956
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  36818993 aaagttgtcacaaattggttgtacaaatatcatttctc 36818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 36869871 - 36869908
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  36869871 aaagttgtcaaaaaatggttgtacaaatatcatttctc 36869908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 36907085 - 36907048
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| | |||||||||||||||||||||||||||    
T  36907085 aaagttgttataaaatggttgtataaatatcatttctc 36907048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 39629730 - 39629763
Alignment:
Q  90 tgtgttatttgaacaatcatttatgtgacaactt 123  Q
    ||||||||||||||||||| ||||||||||||||    
T  39629730 tgtgttatttgaacaatcaattatgtgacaactt 39629763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 43977056 - 43977019
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  43977056 aaagttgtcacaaaatagttgtataaatataatttctc 43977019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 44937260 - 44937219
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| ||||| |||||| ||||||||||||||    
T  44937260 agagaaagttgtcaaaaaattgttgtacaaatatcatttctc 44937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 45150300 - 45150337
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  45150300 aaagttgtcacaaaatagttgtataagtatcatttctc 45150337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 45205335 - 45205286
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| ||| ||| |||||||||||| |||||| ||||||||||||||||    
T  45205335 tatgagagaaaaaattgtcacaaaatagttgtacaaatatcatttctcaa 45205286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 46965806 - 46965851
Alignment:
Q  86 gaggtgtgttatttgaacaatcatttatgtgacaacttataggaca 131  Q
    |||||||||||||| ||| ||||||| ||||||||||| |||||||    
T  46965806 gaggtgtgttatttaaacgatcatttgtgtgacaacttttaggaca 46965851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 47683936 - 47683969
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatt 177  Q
    ||||||||||||||||||||||| ||||||||||    
T  47683936 aaagttgtcacaaaatggttgtacaaatatcatt 47683969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 50294146 - 50294191
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataatta 189  Q
    ||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  50294146 aaagttgtcgcaaagtggttgtacaaatatcatttctcaattatta 50294191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 50652425 - 50652388
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  50652425 aaagttgtcataaaatggttgtacaaatatcatttctc 50652388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 53932429 - 53932462
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  53932429 ttgtcacaaaatggttgtacaaatatcatttctc 53932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 55361252 - 55361293
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||  ||||||||||| ||||||||||||||    
T  55361252 agagaaagttgtcaagaaatggttgtacaaatatcatttctc 55361293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 20714279 - 20714243
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  20714279 aagttgtcacaaattggttgtacaaatatcatttctc 20714243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 371
Target Start/End: Original strand, 21936607 - 21936651
Alignment:
Q  327 aatggcagaaatagcagtgtcttttgctattaaccaactgcttcc 371  Q
    |||||||||||| || ||||||||||||||| ||||||| |||||    
T  21936607 aatggcagaaatggctgtgtcttttgctattgaccaacttcttcc 21936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 23868991 - 23869039
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||| |||| | |||||||||||| |||||||||||||||    
T  23868991 tatgaaagagaaaattgttataaaatggttgtacaaatatcatttctca 23869039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 31997852 - 31997816
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    |||||||||||||||| |||||||| |||||||||||    
T  31997852 agaaagttgtcacaaagtggttgtacaaatatcattt 31997816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 186
Target Start/End: Original strand, 32722189 - 32722221
Alignment:
Q  154 caaaatggttgtataaatatcatttctcaataa 186  Q
    ||||||||||||| |||||||||||||||||||    
T  32722189 caaaatggttgtacaaatatcatttctcaataa 32722221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 43460428 - 43460380
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||  ||||||||||||||||||||  ||||||||||||||    
T  43460428 tatgagagagagggttgtcacaaaatggttgtacgaatatcatttctca 43460380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 43883354 - 43883314
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||||| |||||| |||||||||||| |||||||||||||    
T  43883354 agagaaaattgtcaaaaaatggttgtacaaatatcatttct 43883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 45205463 - 45205423
Alignment:
Q  83 taagaggtgtgttatttgaacaatcatttatgtgacaactt 123  Q
    |||||||||| |||||||||||| ||||| |||||||||||    
T  45205463 taagaggtgtattatttgaacaaccatttgtgtgacaactt 45205423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 48945883 - 48945847
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  48945883 aagttgtcacaaagtggttgtacaaatatcatttctc 48945847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 55344331 - 55344367
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  55344331 aagttatcacaaaatggttgtacaaatatcatttctc 55344367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 32365680 - 32365728
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  32365680 tatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctca 32365728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 18568849 - 18568888
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18568849 aaagttgtcacaaaatggttgtataaatatcatttctcaa 18568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 35936151 - 35936104
Alignment:
Q  84 aagaggtgtgttatttgaacaatcatttatgtgacaacttataggaca 131  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  35936151 aagaggtgtgttatttgaacaatcatttgtgtgacaacttttaggaca 35936104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 28676165 - 28676211
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  28676165 tatgaaagagaaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 925096 - 925137
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaata 185  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  925096 aaagttgtcacaaaatggttgtataaatatcatttatcaata 925137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 39010171 - 39010212
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaata 185  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  39010171 aaagttgtcacaaaatggttgtacaaatatcatttctcaata 39010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 39241314 - 39241363
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  39241314 tatgagagagaaagttgtcacaaattggttgtacaaatatcatttctcaa 39241363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 28480551 - 28480598
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  28480551 tatgacagagaaagttgtcataaagtggttgtataaatatcatttctc 28480598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 28481425 - 28481472
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  28481425 tatgacagagaaagttgtcataaagtggttgtataaatatcatttctc 28481472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 28482300 - 28482347
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||    
T  28482300 tatgacagagaaagttgtcataaagtggttgtataaatatcatttctc 28482347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 54036542 - 54036589
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  54036542 tatgagagataaagttgtcacaaaatggttgtacaaatatcatttctc 54036589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 37547106 - 37547064
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  37547106 agagaaagttgtcacaaagtggttgtacaaatatcatttctca 37547064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 48099848 - 48099810
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  48099848 aaagttgtcacaaagtggttgtataaatatcatttctca 48099810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 169536 - 169573
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  169536 aaagttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 30042170 - 30042133
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||||||||||| |||||||||||||||    
T  30042170 aagttgtcacaaaatggttgtacaaatatcatttctca 30042133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 30778277 - 30778326
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| |||||||||||||||||| ||| |||| ||||||||||||||||    
T  30778277 tatgagagagaaagttgtcacaaattggctgtacaaatatcatttctcaa 30778326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 32621679 - 32621638
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  32621679 agagaaagttgtcacaaaatggttgtgcaaatatcatttctc 32621638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 39684683 - 39684634
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||||||||||| |||||| ||| |||||||| ||||||||||||||||    
T  39684683 tatgatagagaaaattgtcagaaagtggttgtacaaatatcatttctcaa 39684634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 41119500 - 41119541
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  41119500 agagaaagttgtcacaaagtggttgtacaaatatcatttctc 41119541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 45764419 - 45764460
Alignment:
Q  141 gagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  45764419 gagaaagttgtcataaaatagttgtataaatatcatttctca 45764460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 46173591 - 46173550
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  46173591 agagaaagttgtcacaaagtggttgtacaaatatcatttctc 46173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 51359824 - 51359861
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  51359824 aaagttgtcacaaaatggttgtacaaatatcatttctc 51359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 2109490 - 2109443
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| || ||||||||| ||||||||||||||    
T  2109490 tatgaaagagaaagttgtcaaaagatggttgtacaaatatcatttctc 2109443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 4511872 - 4511825
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||||||||| || ||||||||||||||    
T  4511872 tatgagagagaaagttgtcataaaatggttatacaaatatcatttctc 4511825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 11997722 - 11997683
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  11997722 aaagttgtcacaaagtggttgtacaaatatcatttctcaa 11997683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 12387685 - 12387728
Alignment:
Q  141 gagaaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||    
T  12387685 gagaaagttgtcaaaaaatgattgtacaaatatcatttctcaat 12387728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 23220372 - 23220333
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  23220372 aaagttgtcaaaaaatggttgtacaaatatcatttctcaa 23220333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 26885328 - 26885289
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  26885328 aaagttgtcacaaagtggttgtacaaatatcatttctcaa 26885289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 27384234 - 27384187
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||| | |||||||||||| ||||||||||||||    
T  27384234 tatgagagagaaagttgtaataaaatggttgtacaaatatcatttctc 27384187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 28657453 - 28657500
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  28657453 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 28657500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 31657705 - 31657658
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  31657705 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 31657658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 33093136 - 33093175
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  33093136 agaaagttgtcacaaaatagttgtacaaatatcatttctc 33093175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 181
Target Start/End: Complemental strand, 34259850 - 34259815
Alignment:
Q  146 agttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||| ||||||||||||||    
T  34259850 agttgtcacaaaatggttgtacaaatatcatttctc 34259815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 42490967 - 42490920
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  42490967 tatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctc 42490920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 43769770 - 43769723
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  43769770 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 43769723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 46686291 - 46686245
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  46686291 tatgagagagaaagttgt-acaaaatggttgtacaaatatcatttctc 46686245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 1840636 - 1840590
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||||| |||||||||||||||  |||||||||||||| ||||    
T  1840636 agagaaagttatcacaaaatggttgttcaaatatcatttctcgataa 1840590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 3475906 - 3475868
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  3475906 aaagttgtcataaaatggttgtacaaatatcatttctca 3475868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 3968922 - 3968880
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||| | |||||||||||| |||||||||||||||||||    
T  3968922 aaagttgttagaaaatggttgtacaaatatcatttctcaataa 3968880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 5386431 - 5386385
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| |||||||||||||| |||||||||||  |||||||||||||    
T  5386431 tatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 7037518 - 7037556
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  7037518 aaagttgtcacaaattggttgtacaaatatcatttctca 7037556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 11064123 - 11064165
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||||||||| |||||||| |||||||||||||| ||||    
T  11064123 aaagttgtcacaaagtggttgtacaaatatcatttctcgataa 11064165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 12694462 - 12694496
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||||||||||||||||||||| |||||||||||    
T  12694462 aaagttgtcacaaaatggttgtacaaatatcattt 12694496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 14090095 - 14090129
Alignment:
Q  155 aaaatggttgtataaatatcatttctcaataatta 189  Q
    |||||||||| ||||||||||||||||||||||||    
T  14090095 aaaatggttggataaatatcatttctcaataatta 14090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 15596432 - 15596394
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  15596432 aagttgtcacaaagtggttgtacaaatatcatttctcaa 15596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 48563750 - 48563792
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||| |||||||||||| | ||||||||||||||||||||    
T  48563750 agagaaaattgtcacaaaatagctgtataaatatcatttctca 48563792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 1796403 - 1796366
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  1796403 aaagttgtcacaaattggttgtacaaatatcatttctc 1796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 4896534 - 4896571
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  4896534 aaagttgtcacaaagtggttgtacaaatatcatttctc 4896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 5208361 - 5208398
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  5208361 aaagttgtcacaaattggttgtacaaatatcatttctc 5208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 6371016 - 6370979
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  6371016 aagttgtcacaaagtggttgtacaaatatcatttctca 6370979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 8026787 - 8026824
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| || ||||||||||||||||||||    
T  8026787 aaagttgtcacaaattgattgtataaatatcatttctc 8026824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 9162103 - 9162066
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  9162103 aaagttgtcacaaaatgattgtacaaatatcatttctc 9162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 10994190 - 10994223
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  10994190 ttgtcacaaaatggttgtacaaatatcatttctc 10994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 11012178 - 11012141
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  11012178 aaagttgtcataaaatggttgtacaaatatcatttctc 11012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 13267516 - 13267549
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  13267516 ttgtcacaaaatggttgtacaaatatcatttctc 13267549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 20632682 - 20632719
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  20632682 aaagttatcaaaaaatggttgtataaatatcatttctc 20632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 24088598 - 24088635
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  24088598 aaagttgtcataaaatggttgtacaaatatcatttctc 24088635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 24772708 - 24772667
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaata 185  Q
    |||||||||| ||||||| |||| ||||||||||||||||||    
T  24772708 aaagttgtcataaaatggatgtacaaatatcatttctcaata 24772667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 26712501 - 26712538
Alignment:
Q  86 gaggtgtgttatttgaacaatcatttatgtgacaactt 123  Q
    |||||||||||||||||||||||||  |||||||||||    
T  26712501 gaggtgtgttatttgaacaatcattagtgtgacaactt 26712538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 34116574 - 34116611
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  34116574 aaagttgtcacaaagtggttgtacaaatatcatttctc 34116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 35017190 - 35017153
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  35017190 aaagttgtcacaaaatagttgtacaaatatcatttctc 35017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 39449210 - 39449173
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  39449210 aaagttatcacaaaatagttgtataaatatcatttctc 39449173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 41154085 - 41154048
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  41154085 aaagttgtcaaaaaatagttgtataaatatcatttctc 41154048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 41262648 - 41262689
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||  ||||| ||||||||||||||    
T  41262648 agagaaagttgtcacaaaataattgtacaaatatcatttctc 41262689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 43168752 - 43168785
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  43168752 ttgtcacaaaatggttgtacaaatatcatttctc 43168785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 47014976 - 47014939
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  47014976 aaagttgtcacaaaatagttgtacaaatatcatttctc 47014939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 47998631 - 47998594
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  47998631 aaagttgttacaaaatggttgtacaaatatcatttctc 47998594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 51377327 - 51377364
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  51377327 aaagttgtcacaaattggttgtacaaatatcatttctc 51377364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 55268035 - 55268072
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  55268035 aaagttgtcacaaattggttgtacaaatatcatttctc 55268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 4974158 - 4974110
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||||| | ||||| |||||| |||||||||||||||    
T  4974158 tatgagagagaaagttgttaaaaaatagttgtacaaatatcatttctca 4974110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 15515842 - 15515794
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||||||| ||||| ||||||  ||||||||||||||    
T  15515842 tatgagagagaaagttgtcataaaatagttgtaccaatatcatttctca 15515794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 17367482 - 17367446
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  17367482 aaagttgtcaaaaagtggttgtataaatatcatttct 17367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 24310534 - 24310582
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||||||   |||||||||||| |||||||||||||||    
T  24310534 tatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctca 24310582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 27001444 - 27001480
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  27001444 aagttgtcacaaattggttgtacaaatatcatttctc 27001480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 28899228 - 28899276
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||||||  ||||||| ||||| |||||||||||||||    
T  28899228 tatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctca 28899276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 29974340 - 29974384
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| |||||||||||||||||||| |||||  |||||||||||    
T  29974340 tatgaaagagaaagttgtcacaaaatagttgttcaaatatcattt 29974384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 36413339 - 36413387
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||| || ||| ||| ||||||||||||||||||||||||    
T  36413339 tatgagagagaaaattatcataaagtggttgtataaatatcatttctca 36413387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 44539920 - 44539880
Alignment:
Q  83 taagaggtgtgttatttgaacaatcatttatgtgacaactt 123  Q
    |||||| ||||||||||||||| |||| |||||||||||||    
T  44539920 taagagttgtgttatttgaacattcatatatgtgacaactt 44539880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 48326599 - 48326555
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| ||| |||||||||||||| |||||||| |||||||||||    
T  48326599 tatgagagaaaaagttgtcacaaagtggttgtacaaatatcattt 48326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 51717317 - 51717353
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  51717317 aagttgtcacaaattggttgtacaaatatcatttctc 51717353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 51887700 - 51887660
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    |||||||||||||||||| |||  |||||||||||||||||    
T  51887700 aaagttgtcacaaaatggatgttcaaatatcatttctcaat 51887660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 54771592 - 54771632
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||||||||||||||  ||||||||| ||||    
T  54771592 agaaagttgtcacaaaatggttgtacgaatatcattactca 54771632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 54974656 - 54974620
Alignment:
Q  84 aagaggtgtgttatttgaacaatcatttatgtgacaa 120  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  54974656 aagagatgtgttatttgaacaatcatttatatgacaa 54974620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 16143429 - 16143382
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctcaataatta 189  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  16143429 agaaagttgtcacaaaatggttgtacaaatatcatttctcattaatta 16143382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 6420709 - 6420664
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataatta 189  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  6420709 aaagttgtcacaaaatggttgtagaaatatcatttctcaattatta 6420664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 372733 - 372780
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  372733 tatgagagagaaagttgtcacaaaatggttgtacaaaaatcatttctc 372780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 6865800 - 6865847
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  6865800 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 6865847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 14206447 - 14206400
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  14206447 tatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 14206400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 42699094 - 42699056
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42699094 aaagttgtcacaaaatggttgtacaaatatcatttctca 42699056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 14914409 - 14914372
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  14914409 aaagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 3263542 - 3263582
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  3263542 aaagttgtcacaaattggttgtacaaatatcatttctcaat 3263582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 27440516 - 27440476
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  27440516 aaagttgtcacaaaatgattgtacaaatatcatttctcaat 27440476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 33567236 - 33567280
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||    
T  33567236 tatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 33567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 9599762 - 9599801
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  9599762 aaagttgtcacaaattggttgtacaaatatcatttctcaa 9599801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 12718414 - 12718453
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  12718414 aaagttgtcacaaattggttgtacaaatatcatttctcaa 12718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 12779640 - 12779679
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  12779640 aaagttgtcacaaattggttgtacaaatatcatttctcaa 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 13734373 - 13734420
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  13734373 tatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 13734420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 14508181 - 14508228
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||| |||||||||||||| |||||| ||||||||||||||    
T  14508181 tatgaaagagatagttgtcacaaaatagttgtacaaatatcatttctc 14508228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 15639422 - 15639383
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  15639422 aaagttgtcaccaaatggttgtacaaatatcatttctcaa 15639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 30334779 - 30334830
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaata 185  Q
    ||||| ||||||| |||||| ||| |||||||| ||||||||||||||||||    
T  30334779 tatgaaagagaaaattgtcataaagtggttgtacaaatatcatttctcaata 30334830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 34381049 - 34381010
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  34381049 aaagttgtcacaaagtggttgtacaaatatcatttctcaa 34381010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 36548412 - 36548451
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  36548412 agaaagttgtcacaaaatggttatacaaatatcatttctc 36548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 38036758 - 38036711
Alignment:
Q  135 atgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||| |||||||||||||  ||||||||||| ||||||||||||||||    
T  38036758 atgagagagaaagttgtcgtaaaatggttgtttaaatatcatttctca 38036711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 39788740 - 39788779
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  39788740 aaagttgtcacataatggttgtacaaatatcatttctcaa 39788779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 41460153 - 41460114
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  41460153 aaagttgtcaaaaaatgattgtataaatatcatttctcaa 41460114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 30574411 - 30574449
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  30574411 aaagttgtcacaaattggttgtacaaatatcatttctca 30574449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 30776668 - 30776634
Alignment:
Q  149 tgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| |||||||||||||||||||||||||||||    
T  30776668 tgtcataaaatggttgtataaatatcatttctcaa 30776634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 33910101 - 33910147
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| |||||||||||||| |||||||||| | |||||||||||||    
T  33910101 tatgagagagaaagttgtcaaaaaatggttgaacaaatatcatttct 33910147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 39595309 - 39595271
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  39595309 aaagttgtcacaaagtggttgtacaaatatcatttctca 39595271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 41210532 - 41210574
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||| | || |||||||||||||||||||||||||    
T  41210532 agagaaagttgttaaaatatggttgtataaatatcatttctca 41210574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 41621962 - 41622004
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||||| ||| |||||||| |||||||||||||||||||    
T  41621962 aaagttgtcaaaaagtggttgtacaaatatcatttctcaataa 41622004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 2629855 - 2629818
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  2629855 aaagttgtcaaaaaatggttgtacaaatatcatttctc 2629818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 3771040 - 3771077
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  3771040 aaagttgtcacaaaatggttgtacagatatcatttctc 3771077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 7077376 - 7077413
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  7077376 aaagttgtaacaaaatggttgtacaaatatcatttctc 7077413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 9594515 - 9594478
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  9594515 aaagttgtcacaaattggttgtacaaatatcatttctc 9594478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 18695355 - 18695318
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  18695355 aaagttgttacaaaatggttgtacaaatatcatttctc 18695318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 19127160 - 19127123
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  19127160 aagttgtcacaaagtggttgtacaaatatcatttctca 19127123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 19952058 - 19952009
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| ||| ||| |||||||||||||||| || ||||||||||||||||    
T  19952058 tatgagagacaaatttgtcacaaaatggttttacaaatatcatttctcaa 19952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 28501625 - 28501592
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  28501625 ttgtcacaaaatggttgtacaaatatcatttctc 28501592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 28811466 - 28811429
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  28811466 aaagttgtcacaaagtggttgtacaaatatcatttctc 28811429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 31284407 - 31284448
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatca 175  Q
    ||||| |||||||||||||||||||||| |||| ||||||||    
T  31284407 tatgagagagaaagttgtcacaaaatggatgtacaaatatca 31284448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 32360521 - 32360566
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataatta 189  Q
    |||||| ||| | |||||||||||||||||||||| ||||||||||    
T  32360521 aaagttatcatagaatggttgtataaatatcatttgtcaataatta 32360566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 35814490 - 35814453
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  35814490 aaagttatcacaaaatggttgtacaaatatcatttctc 35814453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 38500976 - 38500943
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  38500976 ttgtcacaaaatggttgtacaaatatcatttctc 38500943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 1839357 - 1839401
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| |||||||||||||||||||||| |||  |||||||||||    
T  1839357 tatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 1839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 4098670 - 4098626
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| ||| |||||||||||||||| |||||| |||||||||||    
T  4098670 tatgagagataaagttgtcacaaaatagttgtacaaatatcattt 4098626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 8009940 - 8009904
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||| | ||||||||||||||||||||||||||    
T  8009940 aaagttgtaagaaaatggttgtataaatatcatttct 8009904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 16202778 - 16202730
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||||||||||||| | |||| | |||||||||||||    
T  16202778 tatgagagagaaagttgtcacaaaataggtgtacatatatcatttctca 16202730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 23991169 - 23991205
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  23991169 aagttgtcacaaagtggttgtacaaatatcatttctc 23991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 26660446 - 26660482
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  26660446 aagttgtcacaaaatggatgtacaaatatcatttctc 26660482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 26932038 - 26932074
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  26932038 aagttgtcacaaaatggatgtacaaatatcatttctc 26932074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 36713213 - 36713249
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  36713213 aagttgtcacaaagtggttgtacaaatatcatttctc 36713249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 41173289 - 41173253
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  41173289 aaagttgtcacaaaatggatgtttaaatatcatttct 41173253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 41865632 - 41865676
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| ||| ||| |||||||||||| ||||||||||||||||||    
T  41865632 tatgaaagataaaattgtcacaaaatagttgtataaatatcattt 41865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 42475557 - 42475605
Alignment:
Q  83 taagaggtgtgttatttgaacaatcatttatgtgacaacttataggaca 131  Q
    |||||| |||||||||||||||| ||||||||||| || |||| |||||    
T  42475557 taagagttgtgttatttgaacaaccatttatgtgataatttatgggaca 42475605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 6849295 - 6849332
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6849295 aaagttgtcacaaaatggttgtataaatatcatttctc 6849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 1796535 - 1796491
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||||||||||| |||||||| |||||||||||||||||||    
T  1796535 agaaagttgtcacaaagtggttgtacaaatatcatttctcaataa 1796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 5502418 - 5502371
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  5502418 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 5502371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 37392141 - 37392188
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  37392141 tatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 37392188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 38844824 - 38844862
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  38844824 aaagttgtcacaaaatggttgtacaaatatcatttctca 38844862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 21273745 - 21273782
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||||||||||| |||||||||||||||    
T  21273745 aagttgtcacaaaatggttgtacaaatatcatttctca 21273782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 44607747 - 44607702
Alignment:
Q  135 atgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||    
T  44607747 atgagagagaaagttgtcaccaaatggttgtacaaatatcatttct 44607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 157114 - 157070
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  157114 tatgagagagaaagttgtcgcaaaatggttgtacaaatatcattt 157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 11138954 - 11138910
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||    
T  11138954 tatgagagagaaagttgtcacaaaatagttgtacaaatatcattt 11138910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 14710906 - 14710950
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||    
T  14710906 tatgagagagaaagttgtcacaaaatgattgtacaaatatcattt 14710950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 9047084 - 9047131
Alignment:
Q  135 atgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  9047084 atgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctca 9047131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 12732881 - 12732842
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  12732881 agaaagttgtcacaaagtggttgtacaaatatcatttctc 12732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 30439518 - 30439565
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  30439518 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 30439565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 37524447 - 37524494
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctcaataat 187  Q
    |||||||||||||||||| || ||||| |||||||||||||| |||||    
T  37524447 agagaaagttgtcacaaagtgcttgtacaaatatcatttctcgataat 37524494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 40413362 - 40413409
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||    
T  40413362 tatgagagagaaagttgtcacaaaataattgtacaaatatcatttctc 40413409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 41935039 - 41934992
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||||| ||||||||||||||||||| ||||| ||||||||    
T  41935039 tatgagagagaaaattgtcacaaaatggttgtacaaataccatttctc 41934992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 1370304 - 1370346
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||| ||||| |||||||| |||||||||||||||    
T  1370304 agagaaagttgttacaaagtggttgtacaaatatcatttctca 1370346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 7129570 - 7129528
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    ||||||||||||||||||||||| |||||| |||| |||||||    
T  7129570 aaagttgtcacaaaatggttgtacaaatattatttatcaataa 7129528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 16487651 - 16487605
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||||||||| |||||||||||  |||||||||||||| ||||    
T  16487651 agagaaagttgtcataaaatggttgttcaaatatcatttctctataa 16487605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 32020478 - 32020524
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| |||||||||| ||| |||||||||||| |||||||||||||    
T  32020478 tatgagagagaaagttatcaaaaaatggttgtacaaatatcatttct 32020524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 35937546 - 35937584
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  35937546 aaagttgttacaaaatggttgtacaaatatcatttctca 35937584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 39211100 - 39211054
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| |||||||||||||| |||||||||||  |||||||||||||    
T  39211100 tatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 43873729 - 43873763
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||| |||||||||||||||    
T  43873729 ttgtcacaaaatggttgtacaaatatcatttctca 43873763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 44380651 - 44380685
Alignment:
Q  147 gttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||| ||||||||||||||    
T  44380651 gttgtcacaaaatggttgtacaaatatcatttctc 44380685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 1739845 - 1739808
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  1739845 aaagttgtcaaaaaatggttgtgtaaatatcatttctc 1739808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 2621962 - 2621925
Alignment:
Q  88 ggtgtgttatttgaacaatcatttatgtgacaacttat 125  Q
    |||||||||||||||||||||||| | |||||||||||    
T  2621962 ggtgtgttatttgaacaatcatttgtatgacaacttat 2621925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 5771910 - 5771947
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  5771910 aaagttgtcacaaaatggttgttcaaatatcatttctc 5771947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 10644836 - 10644873
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  10644836 aaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 12045687 - 12045724
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  12045687 aaagttgtcactaaatggttgtacaaatatcatttctc 12045724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 20288570 - 20288533
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  20288570 aaagttgtcacaaattggttgtacaaatatcatttctc 20288533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 21075199 - 21075162
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  21075199 aaagttgtcacaaattggttgtacaaatatcatttctc 21075162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 26294226 - 26294189
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||||  |||||||||||||    
T  26294226 aaagttgtcacaaaatggttgtaccaatatcatttctc 26294189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 26307483 - 26307446
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||||  |||||||||||||    
T  26307483 aaagttgtcacaaaatggttgtaccaatatcatttctc 26307446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 28927718 - 28927681
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  28927718 aaagttgtcacaaagtggttgtacaaatatcatttctc 28927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 35500987 - 35501024
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  35500987 aaagttgtcaaaaagtggttgtataaatatcatttctc 35501024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 36064067 - 36064030
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  36064067 aaagttgtcacaaaatgattgtacaaatatcatttctc 36064030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 36497698 - 36497661
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  36497698 aaagttgtcacaaaatagttgtacaaatatcatttctc 36497661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 38128810 - 38128847
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  38128810 aaagttgtcacaaaatggttgtacaaatgtcatttctc 38128847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 39021477 - 39021514
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  39021477 aaagttatcacaaaatggttgtacaaatatcatttctc 39021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 41293755 - 41293792
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  41293755 aaagttgtcacaaattggttgtaaaaatatcatttctc 41293792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 41541910 - 41541869
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||| |||  ||||||||||||||    
T  41541910 agagaaagttgtcacaaaatggatgttcaaatatcatttctc 41541869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 45101433 - 45101396
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  45101433 aaagttgtcacaaagtggttgtacaaatatcatttctc 45101396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 895975 - 895935
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
T  895975 agagaaagttgtcaaaaagtggttgtacaaatatcatttct 895935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 1065453 - 1065417
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  1065453 aagttgtcacaaattggttgtacaaatatcatttctc 1065417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 5491449 - 5491417
Alignment:
Q  89 gtgtgttatttgaacaatcatttatgtgacaac 121  Q
    ||||||||||||||||||||||| |||||||||    
T  5491449 gtgtgttatttgaacaatcatttgtgtgacaac 5491417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 6806945 - 6806909
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  6806945 aaagttgtcacaaaatgattgtacaaatatcatttct 6806909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 10553833 - 10553869
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  10553833 aaagttatcacaaaatggttgtataaatatgatttct 10553869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 11223894 - 11223930
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  11223894 aagttgtcacaaaatggatgtacaaatatcatttctc 11223930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 22767169 - 22767129
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    |||||||| | |||||||||||| |||||||||||||||||    
T  22767169 aaagttgtgagaaaatggttgtacaaatatcatttctcaat 22767129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 22852874 - 22852910
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  22852874 aagttgtcacaaagtggttgtacaaatatcatttctc 22852910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 25830280 - 25830320
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaat 184  Q
    |||||||| | |||||||||||| |||||||||||||||||    
T  25830280 aaagttgttagaaaatggttgtacaaatatcatttctcaat 25830320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 26000596 - 26000552
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| ||| |||||||||| |||||||||||| |||||||||||    
T  26000596 tatgagagataaagttgtcataaaatggttgtaaaaatatcattt 26000552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 27127657 - 27127689
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||||||||||||||||||| ||||||    
T  27127657 ttgtcacaaaatggttgtataaatataatttct 27127689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 32954893 - 32954853
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||||||||||||||| |||  |||||||||||||    
T  32954893 agagaaagttgtcacaaaatggatgttcaaatatcatttct 32954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 29795488 - 29795447
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  29795488 agagaaagttgtcacaaaatggttgtacaaatatcatttctc 29795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 9834094 - 9834141
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  9834094 tatgaaagagatagttgtcataaaatggttgtataaatatcatttctc 9834141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 19529579 - 19529545
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcattt 178  Q
    |||||||||||||||||||||||||||||||||||    
T  19529579 aaagttgtcacaaaatggttgtataaatatcattt 19529545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 30487503 - 30487545
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  30487503 aaagttgtcacaaattggttgtacaaatatcatttctcaataa 30487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 7121437 - 7121388
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| |||||||||||| ||||||||||| || ||||||||||||||||    
T  7121437 tatgagagagaaagttgttacaaaatggttatacaaatatcatttctcaa 7121388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 36909877 - 36909914
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  36909877 aaagttgtcacaaaatggttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 45202145 - 45202194
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| |||||||||||| | |||||||||||| ||||||||||||||||    
T  45202145 tatgagagagaaagttgtaaaaaaatggttgtacaaatatcatttctcaa 45202194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 24727473 - 24727425
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||||    
T  24727473 tatgagagagaaagttgtaccaaaatggttgtacaaatatcatttctca 24727425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 25801826 - 25801874
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||| |||||||||||||| |||||||| |||||||||||||||    
T  25801826 tatgagagataaagttgtcacaaattggttgtacaaatatcatttctca 25801874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 3012858 - 3012905
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  3012858 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 3012905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 182
Target Start/End: Complemental strand, 4344483 - 4344448
Alignment:
Q  147 gttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||||||||| |||||||||||||||    
T  4344483 gttgtcacaaaatggttgtacaaatatcatttctca 4344448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 6215257 - 6215304
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||||||||    
T  6215257 tatgaaagagaaggttgtaacaaaatagttgtataaatatcatttctc 6215304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 6646882 - 6646835
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  6646882 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 6646835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 8482245 - 8482292
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  8482245 tatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 8482292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 13538263 - 13538310
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||| | ||||||| ||||||||| |||||||    
T  13538263 tatgatagagaaagttgtcatataatggttatataaatattatttctc 13538310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 179
Target Start/End: Original strand, 17267690 - 17267721
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttc 179  Q
    ||||||||||||||||||||||||||||||||    
T  17267690 ttgtcacaaaatggttgtataaatatcatttc 17267721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 22353196 - 22353235
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  22353196 agaaagttgtcacaaaatgattgtacaaatatcatttctc 22353235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 25086376 - 25086329
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctcaataat 187  Q
    |||||||||||||| ||||| |||||| |||||||||||||| |||||    
T  25086376 agagaaagttgtcataaaattgttgtacaaatatcatttctctataat 25086329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 28165166 - 28165127
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  28165166 aaagttgtcacaaaatggttgtacaagtatcatttctcaa 28165127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 33417235 - 33417274
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttc 179  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  33417235 agagagagttgtcacaaaatgattgtataaatatcatttc 33417274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 37966414 - 37966367
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||| |||||||||||||| |||||||| ||||||||||||||    
T  37966414 tatgagagaaaaagttgtcacaaattggttgtacaaatatcatttctc 37966367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 39233736 - 39233779
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataat 187  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||    
T  39233736 aaagttgtcaaaaaatgattgtaaaaatatcatttctcaataat 39233779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 15123970 - 15124008
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  15123970 aaagttgtcaaaaaatggttgtacaaatatcatttctca 15124008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 28277801 - 28277839
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  28277801 aaagttgtcagaaaatagttgtataaatatcatttctca 28277839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 30856844 - 30856806
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  30856844 aaagttgtcacaaagtggttgtacaaatatcatttctca 30856806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 31296882 - 31296916
Alignment:
Q  147 gttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||| ||||||||||||||    
T  31296882 gttgtcacaaaatggttgtacaaatatcatttctc 31296916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 34134805 - 34134843
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  34134805 aaagttgttacaaaatggttgtaaaaatatcatttctca 34134843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 44105115 - 44105161
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| ||||||| ||||||||||||| |||||||||||| ||||||    
T  44105115 tatgagagagaaaattgtcacaaaatgattgtataaatataatttct 44105161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 694321 - 694280
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||| |||||| |||||||||||| ||||||||||||||    
T  694321 agagaaaattgtcaaaaaatggttgtacaaatatcatttctc 694280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 3299139 - 3299176
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  3299139 aaagttgtcataaaatggttgtacaaatatcatttctc 3299176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 4738606 - 4738643
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  4738606 aaagttgtcacaaagtggttgtacaaatatcatttctc 4738643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 5031960 - 5031923
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  5031960 aaagttgttacaaaatggttgtacaaatatcatttctc 5031923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 14255486 - 14255449
Alignment:
Q  86 gaggtgtgttatttgaacaatcatttatgtgacaactt 123  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  14255486 gaggtgtgttatttgaacaaccatttatgcgacaactt 14255449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 17264096 - 17264133
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttc 179  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  17264096 agaaagttgtcataaaatggttatataaatatcatttc 17264133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 28508516 - 28508483
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatt 177  Q
    ||||||||||||||||||||||| ||||||||||    
T  28508516 aaagttgtcacaaaatggttgtacaaatatcatt 28508483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 29168762 - 29168725
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  29168762 aaagttgtcaaaaaatggttgtacaaatatcatttctc 29168725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 33002852 - 33002819
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||| ||||||||||||||||||||||||||    
T  33002852 ttgtcactaaatggttgtataaatatcatttctc 33002819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 33296105 - 33296142
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  33296105 aaagttgtcacaaagtggttgtacaaatatcatttctc 33296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 35171264 - 35171297
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  35171264 ttgtcacaaaatggttgtacaaatatcatttctc 35171297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 36435718 - 36435681
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  36435718 aaagttgtcacaaagtggttgtacaaatatcatttctc 36435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 37767800 - 37767837
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  37767800 aaagttgtcaaaaagtggttgtataaatatcatttctc 37767837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 39247497 - 39247534
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  39247497 aaagttatcacaaaatggttgtacaaatatcatttctc 39247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 42283269 - 42283310
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||| |||||||| ||||||||||||||    
T  42283269 agagagagttgtcacaaagtggttgtacaaatatcatttctc 42283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 44018282 - 44018319
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  44018282 aaagttgtcacaaaatggttgtaaaaatatcatctctc 44018319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 434034 - 433994
Alignment:
Q  85 agaggtgtgttatttgaacaatcatttatgtgacaacttat 125  Q
    ||||| |||||||||||||||||| || |||||||||||||    
T  434034 agaggagtgttatttgaacaatcaattttgtgacaacttat 433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 1489652 - 1489684
Alignment:
Q  149 tgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||| |||||||||||||||||||||    
T  1489652 tgtcacaaaatagttgtataaatatcatttctc 1489684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 6511569 - 6511617
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||| |||||||||||||| |||  |||||||||||||||    
T  6511569 tatgagagagaaaattgtcacaaaatggatgtccaaatatcatttctca 6511617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 26321731 - 26321767
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||| |||||||||||||||| |||||||||||||    
T  26321731 aaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 26321899 - 26321935
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||| |||||||||||||||| |||||||||||||    
T  26321899 aaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 27538933 - 27538977
Alignment:
Q  138 atagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||   |||||||||||| |||||||||||||||    
T  27538933 atagagaaagttgtacaaaaatggttgtacaaatatcatttctca 27538977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 32972919 - 32972963
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| |||||||||||||||||||||| |||  |||||||||||    
T  32972919 tatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 32972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 44018100 - 44018068
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcat 176  Q
    ||||||||||||||||||||||| |||||||||    
T  44018100 aaagttgtcacaaaatggttgtacaaatatcat 44018068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 30945863 - 30945823
Alignment:
Q  141 gagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  30945863 gagaaagttgtcacaaaatgattgtataaatatcatttctc 30945823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 29376749 - 29376787
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  29376749 aaagttgtcacaaaatggttgtaaaaatatcatttctca 29376787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 3339533 - 3339570
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  3339533 aaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 5028284 - 5028325
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  5028284 agagaaagttgtcacaaaatggatgtttaaatatcatttctc 5028325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 12177624 - 12177575
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||| |||||||||||||||||||| |||||| ||||| ||||||||||    
T  12177624 tatgaaagagaaagttgtcacaaaatagttgtacaaataacatttctcaa 12177575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 32621838 - 32621802
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||| ||||||||||||||||||||||||||    
T  32621838 aaagttgtcataaaatggttgtataaatatcatttct 32621802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 32644670 - 32644622
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||||||| ||||| |||||| |||||||||||||||    
T  32644670 tatgagagagaaagttgtcaaaaaatagttgtacaaatatcatttctca 32644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 2241831 - 2241878
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||| |||||||||| ||| |||||||||||||||||||||||    
T  2241831 tatgagagaaaaagttgtcaaaaagtggttgtataaatatcatttctc 2241878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 12441585 - 12441538
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| | |||||| ||||||||||||||    
T  12441585 tatgagagagaaagttgtcacaaagtagttgtacaaatatcatttctc 12441538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 16352172 - 16352219
Alignment:
Q  133 ttatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||| ||||||| |||| | ||||||||||||||||||||||||||    
T  16352172 ttatgagagagaaaattgttataaaatggttgtataaatatcatttct 16352219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 25554274 - 25554239
Alignment:
Q  152 cacaaaatggttgtataaatatcatttctcaataat 187  Q
    ||||||||||||||| ||||||||||||||||||||    
T  25554274 cacaaaatggttgtacaaatatcatttctcaataat 25554239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 25995471 - 25995436
Alignment:
Q  152 cacaaaatggttgtataaatatcatttctcaataat 187  Q
    ||||||||||||||| ||||||||||||||||||||    
T  25995471 cacaaaatggttgtacaaatatcatttctcaataat 25995436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 26094934 - 26094899
Alignment:
Q  152 cacaaaatggttgtataaatatcatttctcaataat 187  Q
    ||||||||||||||| ||||||||||||||||||||    
T  26094934 cacaaaatggttgtacaaatatcatttctcaataat 26094899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 28748171 - 28748124
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  28748171 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 28748124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 31417320 - 31417367
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||| |||||||||| |||||| ||||||||||||||||||||    
T  31417320 tatgacagataaagttgtcataaaatgattgtataaatatcatttctc 31417367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 32149547 - 32149500
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| |||||||| |||||| |||||||    
T  32149547 tatgagagagaaagttgtcacaaagtggttgtacaaatattatttctc 32149500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 33527481 - 33527434
Alignment:
Q  135 atgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||    
T  33527481 atgagagagaaagttatcacaaagtagttgtataaatatcatttctca 33527434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 32457286 - 32457324
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  32457286 aaagttgtcacaaagtggttgtacaaatatcatttctca 32457324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 1897738 - 1897697
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| ||| |||||||| ||||||||||||||    
T  1897738 agagaaagttgtcataaagtggttgtacaaatatcatttctc 1897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 2056820 - 2056783
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  2056820 aaagttgtcacaaattggttgtacaaatatcatttctc 2056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 3089010 - 3088973
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  3089010 aaagttgtcactaaatggttgtacaaatatcatttctc 3088973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 9954585 - 9954548
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  9954585 aaagttgtcacaaattggttgtacaaatatcatttctc 9954548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 11785388 - 11785355
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||||||||||    
T  11785388 ttgtcacaaaatggttgtacaaatatcatttctc 11785355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 12044369 - 12044332
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  12044369 aaagttgtcaaaaaatagttgtataaatatcatttctc 12044332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 15666807 - 15666844
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  15666807 aaagttgtcagaaaatggttgtacaaatatcatttctc 15666844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 15722537 - 15722574
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  15722537 aaagttgtcacaaaatgattgtacaaatatcatttctc 15722574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 25127867 - 25127904
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  25127867 aaagttgttacaaaatggttgtacaaatatcatttctc 25127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 27334895 - 27334858
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  27334895 aaagttgtcacaaaatagttgtacaaatatcatttctc 27334858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 27395635 - 27395598
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  27395635 aaagttgtcacaaaatagttgtacaaatatcatttctc 27395598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 28965874 - 28965911
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  28965874 aaagttgtaacaaaatggttgtacaaatatcatttctc 28965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 30956120 - 30956083
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  30956120 aaagttgtcacaaaatggtggtataaacatcatttctc 30956083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 32135444 - 32135493
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    ||||||||||||||||||   |||||| ||||| ||||||||||||||||    
T  32135444 tatgatagagaaagttgtacaaaaatgattgtacaaatatcatttctcaa 32135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 32729926 - 32729889
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  32729926 aaagttgtcagaaaatggttgtacaaatatcatttctc 32729889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 173
Target Start/End: Complemental strand, 32905786 - 32905757
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatat 173  Q
    ||||||||||||||||||||||||||||||    
T  32905786 aaagttgtcacaaaatggttgtataaatat 32905757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 2163749 - 2163701
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||| |||||||||| || ||||| |||||||||||||||    
T  2163749 tatgagagagaaaattgtcacaaattgattgtacaaatatcatttctca 2163701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 2175382 - 2175334
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||| |||||||||| || ||||| |||||||||||||||    
T  2175382 tatgagagagaaaattgtcacaaattgattgtacaaatatcatttctca 2175334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 6435073 - 6435037
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||||||| |||||||| |||||||||||||    
T  6435073 aaagttgtcacaaagtggttgtacaaatatcatttct 6435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 7611534 - 7611494
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||| ||||  |||||||||||||||    
T  7611534 agaaagttgtcacaaaatgattgttcaaatatcatttctca 7611494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 16121210 - 16121162
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||||||||   |||||||||||| |||||||||||||||    
T  16121210 tatgaaagagaaagttgtacaaaaatggttgtacaaatatcatttctca 16121162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 28549034 - 28549078
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||||||||||||||||||||||   |||||| |||||||||||    
T  28549034 tatgatagagaaagttgtcacaaagcagttgtacaaatatcattt 28549078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 31613 - 31660
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  31613 tatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 31660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 2469750 - 2469703
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  2469750 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 2469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 22330644 - 22330691
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  22330644 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 22330691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 25887641 - 25887586
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaataatta 189  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||||| |||||||    
T  25887641 tatgagagagaaagttgtcacaaagtggatgtacaaatatcatttctctataatta 25887586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 37352003 - 37352050
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  37352003 tatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 37352050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 41080163 - 41080120
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataat 187  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||    
T  41080163 aaagttgtcacaaaatgattgtacaaatatcatttctcaataat 41080120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 2347093 - 2347131
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  2347093 aaagttgtcacaaaatggttgtacaaatatcatttctca 2347131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 33050220 - 33050182
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  33050220 aaagttgtcacaaaatggttgtacaaatatcatttctca 33050182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 46725664 - 46725618
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  46725664 tatgagagaaaaagttgtcacaaaatagttgtataaatatcatttct 46725618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 4971327 - 4971290
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  4971327 aaagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 19426617 - 19426580
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  19426617 aaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 37856188 - 37856225
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  37856188 aaagttgtcacaaaatggttgtacaaatatcatttctc 37856225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 47530325 - 47530362
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||||||||||||||||||    
T  47530325 aaagttgtcataaaatggttgtataaatatcatttctc 47530362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 49128760 - 49128723
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||||||||||||||||||    
T  49128760 aaagttgttacaaaatggttgtataaatatcatttctc 49128723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 2323351 - 2323304
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||||| |||||| ||||||||||||||    
T  2323351 tatgagagagaaagttgtcataaaattgttgtacaaatatcatttctc 2323304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 6427247 - 6427208
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  6427247 aaagttgtcaaaaagtggttgtataaatatcatttctcaa 6427208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 26041368 - 26041321
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||||||||||||  |||||||||||||    
T  26041368 tatgaaagagaaagttgtcataaaatggttgtacgaatatcatttctc 26041321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 28862094 - 28862141
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||||||| |||| ||||||||||||||    
T  28862094 tatgaaagagaaagttgtcataaaatggatgtacaaatatcatttctc 28862141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 29763867 - 29763828
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  29763867 aaagttatcacaaaatggttgtacaaatatcatttctcaa 29763828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 34654604 - 34654565
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  34654604 aaagatgtcacaaaatgattgtataaatatcatttctcaa 34654565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 34992348 - 34992395
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| ||||| |||||||| |||||||||||| ||||||||||||||    
T  34992348 tatgaaagagagagttgtcataaaatggttgtacaaatatcatttctc 34992395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 39875822 - 39875869
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||| | ||| |||||||||||||||||||||||    
T  39875822 tatgagagagaaagttgttaaaaagtggttgtataaatatcatttctc 39875869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 41985113 - 41985160
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||| || ||||| ||||||||||||||    
T  41985113 tatgagagagaaagttgtcacaaattgattgtacaaatatcatttctc 41985160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 43444682 - 43444635
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  43444682 tatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 43444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 7817696 - 7817650
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||| |||||||||||||||||||||| |||  |||||||||||||    
T  7817696 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 7817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 28109994 - 28109952
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||||||| ||| |||||||| |||||||||||||||||||    
T  28109994 aaagttgtcaaaaagtggttgtacaaatatcatttctcaataa 28109952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 181
Target Start/End: Complemental strand, 34264632 - 34264594
Alignment:
Q  143 gaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  34264632 gaaagttgtcacaaaatggtcgtacaaatatcatttctc 34264594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 42663121 - 42663083
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  42663121 aaagttgtcacaaaatggatgtacaaatatcatttctca 42663083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 116668 - 116631
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  116668 aaagttggcacaaaatagttgtataaatatcatttctc 116631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 6353758 - 6353721
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctcaata 185  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  6353758 ttgtcaaaaaatggttgtacaaatatcatttctcaata 6353721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 13437235 - 13437198
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  13437235 aaagttgtcacaaaatggttgtgcaaatatcatttctc 13437198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 20406578 - 20406541
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  20406578 aaagttgtcacaagatggttgtacaaatatcatttctc 20406541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 22692121 - 22692084
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  22692121 aaagttgtcataaaatggttgtacaaatatcatttctc 22692084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 30864451 - 30864488
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  30864451 aaagttgtcacaaattggttgtacaaatatcatttctc 30864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 31274563 - 31274600
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  31274563 aaagttgtcacaaattggttgtacaaatatcatttctc 31274600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 32919018 - 32919051
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||| ||||||||||||||||||||    
T  32919018 ttgtcacaaaatgattgtataaatatcatttctc 32919051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 33223564 - 33223597
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcattt 178  Q
    |||||||||||||||||||||| |||||||||||    
T  33223564 aagttgtcacaaaatggttgtacaaatatcattt 33223597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 37392080 - 37392043
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  37392080 aaagttgtcaaaaaatggttgtacaaatatcatttctc 37392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 41227104 - 41227067
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  41227104 aaagttgtcacaaaataattgtataaatatcatttctc 41227067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 44511176 - 44511139
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||||  |||||||||||||    
T  44511176 aaagttgtcacaaaatggttgtacgaatatcatttctc 44511139  T

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Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 49014324 - 49014291
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatt 177  Q
    ||||||||||||||||||||| ||||||||||||    
T  49014324 aaagttgtcacaaaatggttgcataaatatcatt 49014291  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 3062383 - 3062343
Alignment:
Q  140 agagaaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||||||||||||||| |||  |||||||||||||    
T  3062383 agagaaagttgtcacaaaatggatgttcaaatatcatttct 3062343  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 8459661 - 8459613
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| |||||||||||| | ||| |||||||| |||||||||||||||    
T  8459661 tatgagagagaaagttgttaaaaagtggttgtacaaatatcatttctca 8459613  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 21839146 - 21839190
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    ||||| ||| |||||||||| ||| ||||||||||||||||||||    
T  21839146 tatgagagataaagttgtcaaaaagtggttgtataaatatcattt 21839190  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 22816987 - 22816951
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    ||||||||||||||||||||||  |||||||||||||    
T  22816987 aaagttgtcacaaaatggttgtcaaaatatcatttct 22816951  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 23680059 - 23680095
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcattt 178  Q
    |||||||||||||||||| |||||| |||||||||||    
T  23680059 agaaagttgtcacaaaatagttgtacaaatatcattt 23680095  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 23910285 - 23910321
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||| |||||||||||| |||||||||||||    
T  23910285 aaagttgtcaaaaaatggttgtacaaatatcatttct 23910321  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 30818031 - 30818067
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||| |||||||||||| |||||||||||||    
T  30818031 aaagttgtcataaaatggttgtacaaatatcatttct 30818067  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 37325853 - 37325889
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||||||| |||||||| |||||||||||||    
T  37325853 aaagttgtcacaaattggttgtacaaatatcatttct 37325889  T

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Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 43171207 - 43171243
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||| |||||||||||| |||||||||||||    
T  43171207 aaagttgtcataaaatggttgtacaaatatcatttct 43171243  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 29793 - 29832
Alignment:
Q  142 agaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  29793 agaaagttgtcaaaaagtggttgtataaatatcatttctc 29832  T

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Target: scaffold0100 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 44833 - 44786
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||| |||||||||||||||||||||| |||  ||||||||||||||    
T  44833 tatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 44786  T

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Target: scaffold0252 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 8009 - 8043
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcattt 178  Q
    |||||||||| ||||||||||||||||||||||||    
T  8009 aaagttgtcataaaatggttgtataaatatcattt 8043  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 113662 - 113624
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  113662 aaagttgtcacaaagtggttgtacaaatatcatttctca 113624  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 18632 - 18590
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctcaataa 186  Q
    |||||| ||||||| |||||||| |||||||||||||||||||    
T  18632 aaagttatcacaaattggttgtacaaatatcatttctcaataa 18590  T

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Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 219698 - 219735
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  219698 aaagttgtcacaaagtggttgtacaaatatcatttctc 219735  T

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Target: scaffold0662 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 1115 - 1078
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  1115 aaagttgtcacaaaatagttgtacaaatatcatttctc 1078  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 16628 - 16665
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  16628 aaagttgttacaaaatggttgtacaaatatcatttctc 16665  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 19725 - 19762
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  19725 aaagttgtcacaaaatagttgtacaaatatcatttctc 19762  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 21469 - 21518
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctcaa 183  Q
    |||||||| |||| |||| | |||||||||||| ||||||||||||||||    
T  21469 tatgatagtgaaacttgtaataaaatggttgtacaaatatcatttctcaa 21518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 56216 - 56179
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  56216 aaagttgttacaaaatggttgtacaaatatcatttctc 56179  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 72203 - 72240
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  72203 aaagttgttacaaaatggttgtacaaatatcatttctc 72240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 35991 - 36024
Alignment:
Q  148 ttgtcacaaaatggttgtataaatatcatttctc 181  Q
    ||||||| ||||||||||||||||||||||||||    
T  35991 ttgtcacgaaatggttgtataaatatcatttctc 36024  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 337155 - 337118
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  337155 aaagttgtcagaaaatggttgtacaaatatcatttctc 337118  T

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Target: scaffold0592 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 8342 - 8378
Alignment:
Q  145 aagttgtcacaaaatggttgtataaatatcatttctc 181  Q
    |||||||||||||||||||||| |||||| |||||||    
T  8342 aagttgtcacaaaatggttgtacaaatataatttctc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 18660 - 18708
Alignment:
Q  134 tatgatagagaaagttgtcacaaaatggttgtataaatatcatttctca 182  Q
    ||||| ||||||| |||||||||| || ||||| |||||||||||||||    
T  18660 tatgagagagaaaattgtcacaaattgattgtacaaatatcatttctca 18708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 15568 - 15604
Alignment:
Q  144 aaagttgtcacaaaatggttgtataaatatcatttct 180  Q
    |||||||||||||| |||||||| |||||||||||||    
T  15568 aaagttgtcacaaagtggttgtacaaatatcatttct 15604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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