View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13751_low_16 (Length: 283)
Name: NF13751_low_16
Description: NF13751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13751_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 37489268 - 37489013
Alignment:
| Q |
18 |
gaaaagacactggaaaccatctgaagatatgagattttccattatggagggtgtaagtagcaccggcatagcaggacctctgtaagttaattctgcaggt |
117 |
Q |
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| T |
37489268 |
gaaaagacactggaaaccatctgaagatatgagattttccattatggagggtgtaagtagcaccggcatagcaggacctctgtaagttaattctgcaggt |
37489169 |
T |
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| Q |
118 |
ggagtcgaatcgtcgagtcttgttttaatctccgaaagaagtttacccttttgcttgaattaatgtgatggaaatgatattagctaggcttcggccatct |
217 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37489168 |
ggagtagaatcgtcgagtcttgttttaatctccgaaagaagtttacccttttgcttgaattaatgtgatggaaatgatattagctaggcttcggccatct |
37489069 |
T |
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| Q |
218 |
caaaagtccaatccagaacattacgcctatgttaatttttcgaaccggcacctatg |
273 |
Q |
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| T |
37489068 |
caaaagtccaatcaagaacattacgcctatgttaattttctgaaccggcacctatg |
37489013 |
T |
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