View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13751_low_2 (Length: 506)
Name: NF13751_low_2
Description: NF13751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13751_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 24 - 497
Target Start/End: Original strand, 48593579 - 48594058
Alignment:
| Q |
24 |
aaagtcatagaaacaaagagaacagagatttatggaatattcgttgtgacttctttccacaattccaagacaaagggtgcctactcactagattccatca |
123 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48593579 |
aaagtcatagaaacaaagagaacagagatttatggaatattcgttgtgacttctttccacaattccaagacaaagggtgcctactcactagattccatca |
48593678 |
T |
|
| Q |
124 |
taaacaaaacaagataaactaaaggcataaacagtaaatataaggaaattccttactttattaatgtaataacaaggtataagaacaagaaattatagct |
223 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
48593679 |
taaacaaaacaagataaactaaaggcataaaccgtaaatataaggaaattccttactttattaatgtaataacaaggtataagaacaagaaattataggt |
48593778 |
T |
|
| Q |
224 |
ttcttgaaagaata------ccaagtataagggtctctataaatgtcaacggaggtacggagttatattatgtgatattagatattgagataactaaact |
317 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
48593779 |
ttcttgaaagaatatgcaaaccaagtataagggtctctataaatgtcaacggaggtacggagttatattatgtgatactagatattgagataactaaact |
48593878 |
T |
|
| Q |
318 |
aatcctacaattttatgactaaatattgaatatatagtggcaaggagttataggaattaggtaagggtaggaaatgttgtattatgtagagagaagcagt |
417 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
48593879 |
aatcctacaattttatgactaaatattgaatatatagtggcaaggagttataggaattaggtaagggtaggaaatgttgtattatgtagagagaagctgt |
48593978 |
T |
|
| Q |
418 |
aacaggatatcgcctgcaatgcagggtgattgttttaattttctcatagttttgctatttgatcttcctttcatctcact |
497 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
48593979 |
aacaggatatcgcctgcaatgcagggtaattgttttaattttctcatagttttgctatttgatcttcctttcatttcact |
48594058 |
T |
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