View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13751_low_8 (Length: 379)
Name: NF13751_low_8
Description: NF13751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13751_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 11 - 363
Target Start/End: Complemental strand, 30131623 - 30131267
Alignment:
| Q |
11 |
catcatcattgtgtaaatgggaattaggctgagagtgtaacataaaaccacgaagaatgaaattgttgggacatggaagagagaaattgttccttagcct |
110 |
Q |
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| T |
30131623 |
catcatcattgtgtaaatgggaattaggctgagagtgtagcataaaactacaaagaatgaaattgttgggacatggaagagagaaattgttccttagcct |
30131524 |
T |
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| Q |
111 |
tgaaaaagaaagacaacattctaataggaaaatgatgggagaatttggttctttatattggaagtcagagaaataataatgtgcaagggttcttatatgt |
210 |
Q |
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| T |
30131523 |
tgaaaaaga----caacattctaataggaaaatgatgggaggatttggttctttatattggaagtcagagaaataataatgtgcaagggttcttatatgt |
30131428 |
T |
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| Q |
211 |
accaaatgaaatccaatcaatgtggttctcaaataagggaagattcaattgtataaattac------aatgataatttgtggtaaaacgaagggtactta |
304 |
Q |
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| T |
30131427 |
accaaatgaaatccaatcaatgtggttctcaaataagggaagattcaattgtataaattacaagagaaatgat-atttgtggtaaaacgaagggtactta |
30131329 |
T |
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| Q |
305 |
aaagaacagaatttct---agaaggggaagaagttcagatggagagattacatattattatc |
363 |
Q |
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| T |
30131328 |
aaagaacagaatttctagaagaaggggaagaagttcagatggatagattacatattattatc |
30131267 |
T |
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