View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13752_high_14 (Length: 271)

Name: NF13752_high_14
Description: NF13752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13752_high_14
NF13752_high_14
[»] chr3 (35 HSPs)
chr3 (33-252)||(32677535-32677754)
chr3 (32-252)||(29371596-29371816)
chr3 (33-252)||(18996967-18997186)
chr3 (33-252)||(18999506-18999725)
chr3 (33-252)||(39528749-39528968)
chr3 (31-252)||(1352054-1352275)
chr3 (33-252)||(41349429-41349648)
chr3 (33-252)||(39807037-39807256)
chr3 (40-252)||(29014748-29014960)
chr3 (33-251)||(28228436-28228653)
chr3 (31-252)||(36737892-36738113)
chr3 (48-252)||(39518422-39518626)
chr3 (39-252)||(38855323-38855536)
chr3 (30-252)||(22157255-22157477)
chr3 (31-252)||(21974147-21974368)
chr3 (31-252)||(21996578-21996799)
chr3 (33-252)||(32839949-32840168)
chr3 (32-196)||(55365907-55366071)
chr3 (48-216)||(49040938-49041107)
chr3 (195-252)||(55367714-55367771)
chr3 (33-102)||(49319347-49319416)
chr3 (29-66)||(29014686-29014723)
chr3 (33-66)||(29371538-29371571)
chr3 (33-66)||(32677477-32677510)
chr3 (32-66)||(36737833-36737867)
chr3 (32-66)||(38855561-38855595)
chr3 (32-66)||(39518651-39518685)
chr3 (32-66)||(41349370-41349404)
chr3 (33-66)||(1351996-1352029)
chr3 (33-66)||(18997211-18997244)
chr3 (33-66)||(18999750-18999783)
chr3 (33-66)||(32840193-32840226)
chr3 (33-66)||(39528993-39529026)
chr3 (34-66)||(22157502-22157534)
chr3 (33-65)||(46878980-46879012)
[»] chr7 (37 HSPs)
chr7 (33-252)||(17904163-17904382)
chr7 (33-252)||(46467393-46467612)
chr7 (32-252)||(29427222-29427442)
chr7 (33-252)||(26770179-26770398)
chr7 (33-252)||(6387750-6387969)
chr7 (33-248)||(37179393-37179608)
chr7 (33-252)||(29890884-29891103)
chr7 (32-252)||(41921913-41922132)
chr7 (41-252)||(9876271-9876482)
chr7 (32-252)||(4405108-4405328)
chr7 (33-250)||(6389732-6389941)
chr7 (37-156)||(31503091-31503210)
chr7 (33-252)||(12252069-12252291)
chr7 (48-252)||(33974506-33974713)
chr7 (36-136)||(9332364-9332464)
chr7 (155-252)||(31502710-31502809)
chr7 (53-252)||(9215521-9215722)
chr7 (91-252)||(48049057-48049221)
chr7 (29-142)||(19523863-19523978)
chr7 (32-252)||(31858150-31858372)
chr7 (48-252)||(46689878-46690082)
chr7 (53-252)||(5514797-5514998)
chr7 (123-216)||(22753162-22753257)
chr7 (29-204)||(33915713-33915889)
chr7 (171-252)||(9332458-9332540)
chr7 (33-101)||(29722955-29723023)
chr7 (32-102)||(43701550-43701620)
chr7 (47-207)||(7839071-7839234)
chr7 (48-103)||(49011065-49011120)
chr7 (33-102)||(33379175-33379244)
chr7 (32-65)||(26770424-26770457)
chr7 (31-66)||(4405353-4405388)
chr7 (31-66)||(29890824-29890859)
chr7 (33-66)||(17904407-17904440)
chr7 (33-66)||(29723381-29723414)
chr7 (33-66)||(37179331-37179364)
chr7 (32-65)||(46467334-46467367)
[»] chr5 (21 HSPs)
chr5 (27-252)||(29874948-29875173)
chr5 (33-252)||(12399004-12399223)
chr5 (33-252)||(34208538-34208757)
chr5 (33-252)||(4145694-4145913)
chr5 (33-252)||(4695220-4695439)
chr5 (33-252)||(23090298-23090517)
chr5 (31-252)||(3077595-3077816)
chr5 (33-252)||(42757863-42758088)
chr5 (98-252)||(22645967-22646121)
chr5 (48-216)||(12096296-12096466)
chr5 (54-208)||(22528023-22528180)
chr5 (33-102)||(41610625-41610694)
chr5 (33-102)||(42793040-42793109)
chr5 (30-65)||(41610370-41610405)
chr5 (32-66)||(29875198-29875232)
chr5 (32-66)||(42793562-42793596)
chr5 (33-66)||(12398946-12398979)
chr5 (32-65)||(23090543-23090576)
chr5 (33-66)||(42757805-42757838)
chr5 (48-80)||(594330-594362)
chr5 (36-100)||(4434783-4434847)
[»] chr8 (25 HSPs)
chr8 (29-252)||(33837787-33838010)
chr8 (33-252)||(2508854-2509073)
chr8 (33-252)||(45334334-45334553)
chr8 (33-251)||(28378947-28379165)
chr8 (32-252)||(25106210-25106430)
chr8 (28-252)||(38495530-38495754)
chr8 (31-252)||(9739983-9740205)
chr8 (38-252)||(13469566-13469777)
chr8 (77-252)||(2626296-2626472)
chr8 (32-252)||(32183539-32183760)
chr8 (29-156)||(27793345-27793472)
chr8 (155-252)||(27793102-27793197)
chr8 (31-102)||(27024431-27024502)
chr8 (30-100)||(25978969-25979039)
chr8 (32-101)||(8235161-8235230)
chr8 (68-188)||(3203370-3203492)
chr8 (33-66)||(38495472-38495505)
chr8 (48-95)||(2626667-2626714)
chr8 (32-66)||(27027655-27027689)
chr8 (33-66)||(25106455-25106488)
chr8 (33-66)||(28379191-28379224)
chr8 (33-66)||(33837729-33837762)
chr8 (33-66)||(45334276-45334309)
chr8 (33-65)||(9740231-9740263)
chr8 (29-65)||(13469504-13469540)
[»] chr1 (27 HSPs)
chr1 (30-252)||(47669116-47669338)
chr1 (32-252)||(4817268-4817488)
chr1 (33-253)||(10737758-10737978)
chr1 (33-252)||(46220259-46220478)
chr1 (33-252)||(9831503-9831722)
chr1 (33-252)||(18126851-18127069)
chr1 (32-252)||(48564817-48565036)
chr1 (33-252)||(3384653-3384870)
chr1 (29-252)||(4055480-4055703)
chr1 (34-252)||(7414208-7414427)
chr1 (48-252)||(8889457-8889662)
chr1 (53-252)||(39241172-39241371)
chr1 (33-132)||(1236208-1236307)
chr1 (172-252)||(1236128-1236208)
chr1 (29-112)||(1749521-1749604)
chr1 (56-216)||(26842462-26842623)
chr1 (33-102)||(33020206-33020275)
chr1 (48-252)||(49112332-49112535)
chr1 (32-205)||(33846758-33846936)
chr1 (32-205)||(33947042-33947220)
chr1 (32-66)||(10737700-10737734)
chr1 (182-252)||(37875785-37875854)
chr1 (32-66)||(46220503-46220537)
chr1 (29-66)||(37875723-37875760)
chr1 (33-66)||(47669363-47669396)
chr1 (31-64)||(48565063-48565096)
chr1 (34-66)||(1236071-1236103)
[»] chr4 (19 HSPs)
chr4 (32-252)||(45590741-45590961)
chr4 (32-252)||(8955834-8956054)
chr4 (31-252)||(33288462-33288684)
chr4 (43-241)||(34334342-34334540)
chr4 (33-252)||(18835705-18835926)
chr4 (99-252)||(36971115-36971267)
chr4 (48-252)||(50774116-50774325)
chr4 (39-252)||(49162108-49162307)
chr4 (32-252)||(26025586-26025801)
chr4 (30-125)||(30469353-30469448)
chr4 (30-136)||(39481900-39482006)
chr4 (171-252)||(39482000-39482081)
chr4 (30-102)||(19256183-19256255)
chr4 (180-252)||(30469271-30469343)
chr4 (48-209)||(33108999-33109163)
chr4 (48-102)||(36968353-36968407)
chr4 (32-80)||(36016278-36016326)
chr4 (26-67)||(19257103-19257144)
chr4 (33-66)||(45590986-45591019)
[»] chr6 (16 HSPs)
chr6 (31-252)||(27312173-27312395)
chr6 (32-252)||(32274433-32274653)
chr6 (35-216)||(8504796-8504977)
chr6 (31-252)||(29452600-29452822)
chr6 (94-252)||(2543142-2543300)
chr6 (40-208)||(5003889-5004057)
chr6 (33-252)||(31171048-31171267)
chr6 (32-252)||(7156295-7156503)
chr6 (32-132)||(12174699-12174799)
chr6 (33-252)||(18741947-18742165)
chr6 (26-80)||(29302501-29302555)
chr6 (210-252)||(5008308-5008350)
chr6 (33-66)||(32274678-32274711)
chr6 (32-66)||(2543325-2543359)
chr6 (28-66)||(8504728-8504766)
chr6 (32-66)||(27312113-27312147)
[»] chr2 (15 HSPs)
chr2 (35-252)||(15233757-15233974)
chr2 (32-252)||(35792965-35793184)
chr2 (32-252)||(43040907-43041127)
chr2 (32-252)||(41252414-41252635)
chr2 (33-252)||(41642891-41643113)
chr2 (32-228)||(31296082-31296278)
chr2 (33-252)||(44104604-44104833)
chr2 (47-252)||(31903439-31903642)
chr2 (48-252)||(21727684-21727891)
chr2 (33-102)||(10118660-10118729)
chr2 (32-66)||(10112338-10112372)
chr2 (33-66)||(15233999-15234032)
chr2 (33-66)||(41252660-41252693)
chr2 (33-66)||(43040849-43040882)
chr2 (33-65)||(44104546-44104578)
[»] scaffold0103 (1 HSPs)
scaffold0103 (32-252)||(44618-44837)


Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 32677754 - 32677535
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32677754 tactccctccattccttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 32677655  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32677654 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacacaca 32677555  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  32677554 aatgtttatatactttaatt 32677535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 29371816 - 29371596
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29371816 atactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttac 29371717  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29371716 ccttgttggaaaacacaataaactattaaagtacttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacacac 29371617  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  29371616 aaatgtttatatactttaatt 29371596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 18996967 - 18997186
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18996967 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 18997066  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  18997067 cttgttggaaaacacaataaactattaaagtagttgtgacttttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacgcaca 18997166  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  18997167 aatgtttatatactttaatt 18997186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 18999506 - 18999725
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18999506 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 18999605  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  18999606 cttgttggaaaacacaataaactattaaagtagttgtgacttttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacgcaca 18999705  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  18999706 aatgtttatatactttaatt 18999725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 39528749 - 39528968
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  39528749 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 39528848  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  39528849 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatacaca 39528948  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  39528949 aatgtttatatactttaatt 39528968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 31 - 252
Target Start/End: Complemental strand, 1352275 - 1352054
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  1352275 aatactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagttta 1352176  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacaca 230  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  1352175 cccttgttggaaaacacaataaactattaaagtagttgtgacctttagtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaataca 1352076  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||| ||||||||||||||||    
T  1352075 caaatatttatatactttaatt 1352054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 41349648 - 41349429
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  41349648 tactccctccattccttttcttttgatgttttagaacttcaactatattctaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 41349549  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  41349548 cttgttggaaaacacaataaactattaaagtagttgtgacctttgatttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatacaca 41349449  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  41349448 aatgtttatatactttaatt 41349429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 39807256 - 39807037
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  39807256 tacttcctccattccttttcttttgatgttttagaacttcaactatattacaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 39807157  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||    
T  39807156 ctcgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataagaacatttaagtaaaaaatacaca 39807057  T
Q  233 aatgtttatatactttaatt 252  Q
    ||| ||||||||||||||||    
T  39807056 aatatttatatactttaatt 39807037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 40 - 252
Target Start/End: Complemental strand, 29014960 - 29014748
Alignment:
Q  40 tccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttg 139  Q
    ||||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  29014960 tccattctttttttttttatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacccttgttg 29014861  T
Q  140 gaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgttt 239  Q
    ||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29014860 gaaaacacattaaactattaaagtagttgcgatttttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacacacaaatgttt 29014761  T
Q  240 atatactttaatt 252  Q
    |||||||||||||    
T  29014760 atatactttaatt 29014748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 33 - 251
Target Start/End: Original strand, 28228436 - 28228653
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28228436 tactctctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 28228535  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| || | ||||||||||||| |||||||    
T  28228536 cttgttggaaaatacaataaactattaaagtagctgtgacatttggtttatcacatgtgaatttaatgataaa-aatggcatttaagtaaaaaacacaca 28228634  T
Q  233 aatgtttatatactttaat 251  Q
    |||||||||||||||||||    
T  28228635 aatgtttatatactttaat 28228653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 31 - 252
Target Start/End: Complemental strand, 36738113 - 36737892
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    |||||||| | ||||| |||||||||||||||||||||||| ||||||||   |||||||||||||||||||| ||||||||||||||||||||||||||    
T  36738113 aatactccattcattccttttcttttgatgttttagaactttaactatattttaaaacttttgatgttttagtgaatttattattgttttctcaagttta 36738014  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacaca 230  Q
    |  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  36738013 ctcttgttggaaaacacaataaactattaaagtagttgtgacatttgatttatcacatgtgaatttaatgataaataaggatatttaagtaaaaaacaca 36737914  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||||||||||||||||||||    
T  36737913 caaatgtttatatactttaatt 36737892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 39518422 - 39518626
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacac 147  Q
    |||| ||||||||||||| ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  39518422 tttttttttgatgttttaaaacttcaactatatttcaaaacttttgatattttagtgaatttattattgttttctcaagtttatccttgttggaaaacac 39518521  T
Q  148 aataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactt 247  Q
    |||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39518522 aataaactattaaagtagttatgacatttgatttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactt 39518621  T
Q  248 taatt 252  Q
    |||||    
T  39518622 taatt 39518626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 39 - 252
Target Start/End: Original strand, 38855323 - 38855536
Alignment:
Q  39 ctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgtt 138  Q
    |||||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||| | |||||    
T  38855323 ctccattccttttcttttgatgttttaaaacatcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaattttatccttgtt 38855422  T
Q  139 ggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtt 238  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| ||    
T  38855423 gaaaaacaccataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattttagtaaaaatcacacaaatatt 38855522  T
Q  239 tatatactttaatt 252  Q
    |||||| |||||||    
T  38855523 tatatattttaatt 38855536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 22157255 - 22157477
Alignment:
Q  30 taatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttt 129  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| |||||||||||||||||||| ||||    
T  22157255 taatattccctccatttcttttcttttgatgttttagaacttcaactatattctaaaacttttgatattttagtgaatttattattgttttctcaggttt 22157354  T
Q  130 acctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacac 229  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||| | |     
T  22157355 acctttgttggaaaacaccataaaatattaaagtagttgtgacctttggtttatcacatgtgaatttaatactaaataaggacattttagtcaaaaatag 22157454  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||| ||||||||||||||||    
T  22157455 acaaatatttatatactttaatt 22157477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 21974147 - 21974368
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    |||| ||||||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  21974147 aatattccctccatttcttttcttttgatgttttagaatttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaggttta 21974246  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacaca 230  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||| ||| | | |    
T  21974247 cctttgttggaaaacaccataaaatattaaagtagttgtgacctttggtttatcacatgtgaatttaatactaaataaggatattttagtcaaaaataga 21974346  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||| ||||||||||||||||    
T  21974347 caaatatttatatactttaatt 21974368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 21996578 - 21996799
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    |||| ||||||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  21996578 aatattccctccatttcttttcttttgatgttttagaatttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaggttta 21996677  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacaca 230  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||| ||| | | |    
T  21996678 cctttgttggaaaacaccataaaatattaaagtagttgtgacctttggtttatcacatgtgaatttaatactaaataaggatattttagtcaaaaataga 21996777  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||| ||||||||||||||||    
T  21996778 caaatatttatatactttaatt 21996799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 32839949 - 32840168
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||   |||  ||||||||||||||| |||| |||||| |||||| ||||||  |    
T  32839949 tactccctccattcattttctttttatattttagaacttcaactatattttaaattttttgatgttttagtgaatt-attattattttcttaagtttgtc 32840047  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacacac 231  Q
     ||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  32840048 cttgttagaaaacacaataaactattaaaatagttgtgacatttggtttatcacatgtgaatttaatgataaataagaacatttaagtaaaaaaacacac 32840147  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  32840148 aaatgtttatatactttaatt 32840168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 55365907 - 55366071
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||  ||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  55365907 atactcccttcattccttttcttttgatgttttagaacttcaactatatttcaaattttttgatgttttagtgaatttattattgttttctcaagtttac 55366006  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaattt 196  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55366007 ccttgttagaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaattt 55366071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 49041107 - 49040938
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaaca- 146  Q
    ||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||  ||||| ||||  |||| || ||||||| |||||| ||||||     
T  49041107 ttttcttttgatgttttagaacttcaactatgttccaaaatatttgatgttttagtatatttaatatt--tttcccacgtttacccttgttgaaaaacaa 49041010  T
Q  147 --caataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattt 216  Q
      ||  |||||||||||| ||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  49041009 accataaaactattaaaggagttgggacctttggtttatcaaatgtgaatttaatcataaacaaggacattt 49040938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 55367714 - 55367771
Alignment:
Q  195 ttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  55367714 ttaatgataaataaggacatttaagtaaaaaatacacaaatatttatatactttaatt 55367771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 49319347 - 49319416
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||  || | |||| ||||||||||||||    
T  49319347 tacttcctccattccttttcttttgatgttttagaacttaaacttcattctaaaaattttgatgttttag 49319416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 29014686 - 29014723
Alignment:
Q  29 ataatactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29014686 ataatactccctccattccttttcttttgatgttttag 29014723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 29371538 - 29371571
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||||||||||||||||||||||    
T  29371538 tactccctccattcattttcttttgatgttttag 29371571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 32677477 - 32677510
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||||||||||||||||||||||    
T  32677477 tactccctccattcattttcttttgatgttttag 32677510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 36737833 - 36737867
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  36737833 atactccctccattccttttcttttgatgttttag 36737867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 38855595 - 38855561
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  38855595 atactccctccattccttttcttttgatgttttag 38855561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 39518685 - 39518651
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  39518685 atactccctccattccttttcttttgatgttttag 39518651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 41349370 - 41349404
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  41349370 atactccctccattccttttcttttgatgttttag 41349404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 1351996 - 1352029
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  1351996 tactccctccattccttttcttttgatgttttag 1352029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 18997244 - 18997211
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  18997244 tactccctccattccttttcttttgatgttttag 18997211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 18999783 - 18999750
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  18999783 tactccctccattccttttcttttgatgttttag 18999750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 32840226 - 32840193
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||||||||||||||| ||||||    
T  32840226 tactccctccattcattttcttttgatattttag 32840193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 39529026 - 39528993
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  39529026 tactccctccattccttttcttttgatgttttag 39528993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 22157534 - 22157502
Alignment:
Q  34 actccctccattcattttcttttgatgttttag 66  Q
    |||||||||||| ||||||||||||||||||||    
T  22157534 actccctccatttattttcttttgatgttttag 22157502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 46879012 - 46878980
Alignment:
Q  33 tactccctccattcattttcttttgatgtttta 65  Q
    |||||||||||||| ||||||||||||||||||    
T  46879012 tactccctccattccttttcttttgatgtttta 46878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 17904163 - 17904382
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17904163 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 17904262  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17904263 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacacaca 17904362  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  17904363 aatgtttatatactttaatt 17904382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 46467612 - 46467393
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46467612 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 46467513  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  46467512 tttgttggaaaacacaataaactattaaagtagttgcgacctttggtttatcacatgtgaatttaatgataaataagaacatttaagtaaaaaacacaca 46467413  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  46467412 aatgtttatatactttaatt 46467393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 29427442 - 29427222
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29427442 atactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttac 29427343  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  29427342 ccttgttggaaaacacaataaactattaaagtagttgtgatctttggtttatcacatgtgaatttaatgataaataaagacatttaagtaaaaaacacac 29427243  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  29427242 aaatgtttatatactttaatt 29427222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 26770179 - 26770398
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26770179 tactccctccattccttttcttttgatgttttagaacttcaactaaattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 26770278  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  26770279 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggatatttaagtaaaaaacacaca 26770378  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  26770379 aatgtttatatactttaatt 26770398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 6387969 - 6387750
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  6387969 tactccctccattccttttcttttgatgttttagaactgcaactatattccaaaacttttgatgttttagtgaatttgttattgttttatcaagtttacc 6387870  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  6387869 cttgttggaaaacacaataaactattaaagtagttgtgacatttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatacaca 6387770  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  6387769 aatgtttatatactttaatt 6387750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 33 - 248
Target Start/End: Complemental strand, 37179608 - 37179393
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  37179608 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttct-aagtttacc 37179510  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacacac 231  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  37179509 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaacaaggacatttaagtaaaaaaacacac 37179410  T
Q  232 aaatgtttatatacttt 248  Q
    |||||| ||||||||||    
T  37179409 aaatgtctatatacttt 37179393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 29891103 - 29890884
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||||||| |    
T  29891103 tactccctccattccttttcttttgatgttttaaaacttcaactatattccaaaatttttgatgttttagtgaatttatgattgttttctcaagtttatc 29891004  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29891003 cttgatggaaaacacaataaactattaaagtagttgtgacttttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacacaca 29890904  T
Q  233 aatgtttatatactttaatt 252  Q
    | ||||||||||||||||||    
T  29890903 agtgtttatatactttaatt 29890884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 41922132 - 41921913
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  41922132 atactccctctatttcttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttaatattgttttatcaagtttac 41922033  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  41922032 ccttgttgaaaaacacaataaactattaaagtagttgcaacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaa-aaacac 41921934  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  41921933 aaatgtttatatactttaatt 41921913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 41 - 252
Target Start/End: Original strand, 9876271 - 9876482
Alignment:
Q  41 ccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttgg 140  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  9876271 ccattccttttcttttgatgttttaaaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaattttacccttgttgg 9876370  T
Q  141 aaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgttta 240  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| ||||    
T  9876371 aaaacaccataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattttagtaaaaatcacacaaatattta 9876470  T
Q  241 tatactttaatt 252  Q
    |||| |||||||    
T  9876471 tatattttaatt 9876482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 4405108 - 4405328
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||| ||||     
T  4405108 atactccctccatttcttttcttttgatgttttaaaacttcaactatattctaaaacatttgatgttttagtgaatttattattgttttctcaattttat 4405207  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||    
T  4405208 ccttgttggaaaacaccataaattattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattttagtaaaaatcacac 4405307  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||| |||||||| |||||||    
T  4405308 aaatatttatatattttaatt 4405328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 33 - 250
Target Start/End: Original strand, 6389732 - 6389941
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||     
T  6389732 tactccctccattcattttgttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttact 6389831  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||| |||| |||||||||        ||||||||||||||||||||||||||||| |||||||    
T  6389832 cttgttggaaaacacaataaactattaaagtagttgtgacatttgatttatcaca--------taatgataaataaggacatttaagtaaaaaacacaca 6389923  T
Q  233 aatgtttatatactttaa 250  Q
    ||| ||||||||||||||    
T  6389924 aatatttatatactttaa 6389941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 31503210 - 31503091
Alignment:
Q  37 ccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttg 136  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| |||    
T  31503210 ccctccgttccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttcttaagtttacccttg 31503111  T
Q  137 ttggaaaacacaataaacta 156  Q
    ||||||||||| ||||||||    
T  31503110 ttggaaaacactataaacta 31503091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 12252069 - 12252291
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| ||||||  ||||||||| || |  ||||| | |||||||| |||||||||     
T  12252069 tactccctccattttttttcttttgatgttttagaacttcaactatattccaaaatatttgatgttctaatatatttaatcttgttttcccaagtttact 12252168  T
Q  133 tttgttggaaaacaca--at-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacac 229  Q
     | |||| ||||||||  || |||||||||||| |||| |||| ||||| |||||||||||||||||||| |||||||||||||||| |||  || |||     
T  12252169 ctagttgaaaaacacaccataaaactattaaaggagttatgacttttggcttatcacatgtgaatttaatcataaataaggacattttagtccaaaacat 12252268  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||| ||| ||||| ||||||    
T  12252269 acaaatatttctatacattaatt 12252291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 33974506 - 33974713
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacac 147  Q
    ||||||||||||||||| ||||||||||||||| ||||||  ||| ||||||||||  ||||| |||| ||||| |||||||||| |||||| |||||||    
T  33974506 ttttcttttgatgttttcgaacttcaactatattccaaaatattttatgttttagtatatttaatatttttttcccaagtttacccttgttgaaaaacac 33974605  T
Q  148 a--at-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatata 244  Q
    |  || |||||||||||| ||||||||||||  | ||||||||||||| |||||| ||||||||||| |||| |||  || ||| || ||| ||| ||||    
T  33974606 accataaaactattaaaggagttgtgaccttcagcttatcacatgtgagtttaatcataaataaggatattttagtccaatacataccaatatttctata 33974705  T
Q  245 ctttaatt 252  Q
    ||||||||    
T  33974706 ctttaatt 33974713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 9332364 - 9332464
Alignment:
Q  36 tccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttaccttt 135  Q
    ||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  9332364 tccctccattttttttcttttgatgttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttattattgttttctcaggtttaccttt 9332463  T
Q  136 g 136  Q
    |    
T  9332464 g 9332464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 31502809 - 31502710
Alignment:
Q  155 tattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt--aaaacacacacaaatgtttatatactttaatt 252  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  31502809 tattaaagtagttgtgacttttggcttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaaaacacacaaatgtttatatactttaatt 31502710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 252
Target Start/End: Complemental strand, 9215722 - 9215521
Alignment:
Q  53 ttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaa--acacaat 150  Q
    |||||||||||||||||||||||||||| ||||||  ||| ||||||||||  || || |||| |||| |||| |||||| |||||| |||  |||| ||    
T  9215722 ttttgatgttttagaacttcaactatattccaaaatatttaatgttttagtatatgtaatatttttttttcaaatttacccttgttgaaaaagacaccat 9215623  T
Q  151 -aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatacttta 249  Q
     ||| |||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||||| |||  || ||| |||||| ||||| |||||||    
T  9215622 aaaattattaaaggagttgtgacctttgatttatcacatgtgaatttaattat-aataaggacattttagtccaaaacatacaaatatttatgtacttta 9215524  T
Q  250 att 252  Q
    |||    
T  9215523 att 9215521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 252
Target Start/End: Original strand, 48049057 - 48049221
Alignment:
Q  91 ttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacacaata---aactattaaagtagttgtgacctttggtttatcaca 187  Q
    |||||||||||||  ||||| |||| ||||| ||||||||||  ||||| |||||||| ||   ||||||||||| ||||||||||||||| ||||||||    
T  48049057 ttgatgttttagtatatttaatatttttttcccaagtttacccctgttgaaaaacacactagaaaactattaaaggagttgtgacctttggcttatcaca 48049156  T
Q  188 tgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    ||| |||||||| |||||||||||||||| ||| ||| ||| |||||| ||| ||||||||||||    
T  48049157 tgtaaatttaatcataaataaggacattttagtcaaaaacatacaaatatttctatactttaatt 48049221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 19523978 - 19523863
Alignment:
Q  29 ataatactccctccattcattttcttt--tgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaag 126  Q
    ||||||||||||| |||| |||| |||  ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| |||||    
T  19523978 ataatactccctctattccttttttttgttgatgttttagaacttcaactatattccaaaatttttgatgttttagtgaatttattattgttttatcaag 19523879  T
Q  127 tttacctttgttggaa 142  Q
    |||||| |||||||||    
T  19523878 tttacccttgttggaa 19523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 31858372 - 31858150
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||   ||||  ||||||||||||||  ||||| | || ||||| ||| |||||    
T  31858372 atactccctccattttttttcttttgatgttttacaacttcaactatattttaaaatatttgatgttttagtatatttaatttt-ttttcccaaatttac 31858274  T
Q  132 ctttgttggaaaacaca--ataaac-tattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacaca 228  Q
    | | |||| ||||||||  |||||  |||||||  ||||||||||||||  ||||||||||| |||||||| ||||||||||| |||| | | ||| |||    
T  31858273 cctcgttgaaaaacacatcataaaagtattaaatgagttgtgacctttgacttatcacatgtaaatttaatcataaataaggatattttaatcaaaaaca 31858174  T
Q  229 cacaaatgtttatatactttaatt 252  Q
     |||||||||||||| ||||||||    
T  31858173 tacaaatgtttatattctttaatt 31858150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 46689878 - 46690082
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaa---a 144  Q
    ||||||||||||||||||||||||||||||||| ||||||   |||||||||||||    ||| |||| ||||| |||||||||| || ||| |||   |    
T  46689878 ttttcttttgatgttttagaacttcaactatattccaaaatacttgatgttttagtatggttaatatttttttcccaagtttaccctttttgaaaaaaca 46689977  T
Q  145 cacaat-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatat 243  Q
    ||| || |||||||||||| ||||||||| ||||| ||||||||||||||||||||     |||| ||||||| |||  || ||| |||||| |||||||    
T  46689978 cacgataaaactattaaagaagttgtgacatttggcttatcacatgtgaatttaat----tataatgacattttagtccaaaacatacaaatatttatat 46690073  T
Q  244 actttaatt 252  Q
    |||||||||    
T  46690074 actttaatt 46690082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 252
Target Start/End: Original strand, 5514797 - 5514998
Alignment:
Q  53 ttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacacaata- 151  Q
    |||| |||||||||||||| || ||||| | ||||  ||||||  ||||||  ||||| ||||  ||| ||||||||||| |||||  |||||||| ||     
T  5514797 ttttaatgttttagaactttaaatatattctaaaatatttgattatttagtatatttaatatttattt-tcaagtttacccttgttaaaaaacacactat 5514895  T
Q  152 --aactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatacttta 249  Q
      ||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||| || ||| |||||| ||| |||| ||||    
T  5514896 aaaactattaaaagagttgtgacctttgatttatcacatgtgaatttaatcataaataagaacattttagtacaaaacatacaaatatttttatatttta 5514995  T
Q  250 att 252  Q
    |||    
T  5514996 att 5514998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 22753257 - 22753162
Alignment:
Q  123 caagtttacctttgttggaaaacaca--ataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattt 216  Q
    |||||||||  ||||||||||||| |  |||||||||||||  ||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  22753257 caagtttacgcttgttggaaaacaaactataaactattaaaaaagttgtgacctttgacttatcacatgtgaatttaatgataaataaagacattt 22753162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 204
Target Start/End: Original strand, 33915713 - 33915889
Alignment:
Q  29 ataatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtt 128  Q
    |||||||||||||||||  |||||||||| |||||| ||| || ||||||||  |||||  ||||||||||||||  ||||| | || ||||| ||||||    
T  33915713 ataatactccctccattt-ttttcttttgttgtttttgaattttaactatatttcaaaatatttgatgttttagtatatttaatttttttttcccaagtt 33915811  T
Q  129 tacctttgttggaaaacaca--at-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataa 204  Q
    |||| |||||| ||||||||  || |||||||||||   |||||||||||||  |||||| || |||||||||| ||||    
T  33915812 tacc-ttgttgaaaaacacaccataaaactattaaataggttgtgacctttgccttatcatatatgaatttaattataa 33915889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 9332458 - 9332540
Alignment:
Q  171 acctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacacacaaatgtttatatactttaatt 252  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||| ||| |||| | |||||||| ||||||||||||||||    
T  9332458 acctttgatttatcacatgtgaatttaatactaaataaggacattttagtaaaaaaatacacaaatatttatatactttaatt 9332540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 29722955 - 29723023
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgtttta 101  Q
    ||||| |||||||| |||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||    
T  29722955 tactctctccattccttttcttttgatattttagaacttaaactttattccaaaacttttgatgtttta 29723023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 43701550 - 43701620
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||  || ||||||  |||||||||||||    
T  43701550 atactccctccattccttttcttttgatgttttagaacttaaacttcattccaaaaaatttgatgttttag 43701620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 207
Target Start/End: Original strand, 7839071 - 7839234
Alignment:
Q  47 attttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaaca 146  Q
    ||||| |||||||||||| |||||| || ||||| |||||   ||| || |||||||  ||| | || | |||||  |||||||||||  ||| ||||||    
T  7839071 attttattttgatgtttttgaactttaattatattccaaattattttatattttagtatattgaatacttttttcctaagtttaccttcattgaaaaaca 7839170  T
Q  147 ca--at-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaata 207  Q
    ||  || ||| |||||||| ||||||||| |||||||||| ||||||||||||||| |||||||    
T  7839171 caccataaaattattaaaggagttgtgacatttggtttattacatgtgaatttaatcataaata 7839234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 49011120 - 49011065
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagt 103  Q
    ||||||||||||||||||| |||||||||||||  |||||| ||||||||||||||    
T  49011120 ttttcttttgatgttttaggacttcaactatatttcaaaacatttgatgttttagt 49011065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 33379244 - 33379175
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    |||||||||||||  |||||||||||||||||||||||||||||  ||  |||||  |||||||||||||    
T  33379244 tactccctccatttcttttcttttgatgttttagaacttcaacttgatttcaaaatatttgatgttttag 33379175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 26770457 - 26770424
Alignment:
Q  32 atactccctccattcattttcttttgatgtttta 65  Q
    ||||||||||||||||||||||||||||||||||    
T  26770457 atactccctccattcattttcttttgatgtttta 26770424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 4405388 - 4405353
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||||| |||||||||||||||||||    
T  4405388 aatactccctccattccttttcttttgatgttttag 4405353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 29890824 - 29890859
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||||| |||||||||||||||||||    
T  29890824 aatactccctccattccttttcttttgatgttttag 29890859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 17904440 - 17904407
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  17904440 tactccctccattccttttcttttgatgttttag 17904407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 29723414 - 29723381
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  29723414 tactccctccattccttttcttttgatgttttag 29723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 37179331 - 37179364
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  37179331 tactccctccattccttttcttttgatgttttag 37179364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 46467334 - 46467367
Alignment:
Q  32 atactccctccattcattttcttttgatgtttta 65  Q
    ||||||||||||||| ||||||||||||||||||    
T  46467334 atactccctccattccttttcttttgatgtttta 46467367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 27 - 252
Target Start/End: Original strand, 29874948 - 29875173
Alignment:
Q  27 agataatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaag 126  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||    
T  29874948 agatattactccctccattctttttcttttgatgttttagaacttcaactatattccaaaacatttgatgttttagtgaatttattattgttttctcaag 29875047  T
Q  127 tttacctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaca 226  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29875048 tttacccttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaa 29875147  T
Q  227 cacacaaatgtttatatactttaatt 252  Q
    ||||||||||||||||||||||||||    
T  29875148 cacacaaatgtttatatactttaatt 29875173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 12399223 - 12399004
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  12399223 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 12399124  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||    
T  12399123 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataagaacatttaagtaaaaaatacaca 12399024  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  12399023 aatgtttatatactttaatt 12399004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 34208538 - 34208757
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  34208538 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 34208637  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||    
T  34208638 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcatatgtgaatttaatgataaataaggacatttaagtaaaaaatacaca 34208737  T
Q  233 aatgtttatatactttaatt 252  Q
    ||| ||||||||||||||||    
T  34208738 aatatttatatactttaatt 34208757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 4145694 - 4145913
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  4145694 tactcgctccattccttttcttttgatgttttagaactttaactatattccaaaacttttgatgttttagtgaatttgttattgttttcttaagtttacc 4145793  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  4145794 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatacaca 4145893  T
Q  233 aatgtttatatactttaatt 252  Q
    ||| ||||||||||||||||    
T  4145894 aatatttatatactttaatt 4145913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 4695439 - 4695220
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4695439 tactcccttcattccttttcttttgattttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 4695340  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||    
T  4695339 cttgttggaaaacacaataaactattaaagtagttgtgacatttggtttatcacatgtgaatttaataataaataaggacatttaagtaaaaaatacaca 4695240  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  4695239 aatgtttatatactttaatt 4695220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 23090298 - 23090517
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  23090298 tactccctccattccttttcttttgatgttttagaacttcaactgtattccaaaatttttgatgttttagtgaatttgttattgttttctcaagtttacc 23090397  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||    
T  23090398 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcatatgtgaatttaatgataaataagaacatttaagtaaaaaatacaca 23090497  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||| ||||||||||||    
T  23090498 aatgtttgtatactttaatt 23090517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 3077595 - 3077816
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3077595 aatactccctccattcattttcttttgatgttttagaatttcaactatattttaaaacttttgatgttttagtgaatttgttattgttttctcaagttta 3077694  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacaca 230  Q
     | ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||    
T  3077695 tccttgttggaaaacacaataaactattaaagtagttgtgacattttgtttatcacatatgaatttaatgataaataaggacatttaagtaaaaaataca 3077794  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||| ||||||||||||||||    
T  3077795 caaatatttatatactttaatt 3077816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 42758088 - 42757863
Alignment:
Q  33 tactccctccattcattttcttttg-atgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    |||||| |||||||||||| ||||  ||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||||     
T  42758088 tactccttccattcatttttttttttatgttttagaacttcaactatttttcaaaacttttgatgttttagtgaatttattattgttttctcaagtttat 42757989  T
Q  132 ctttgttggaaaacacaataaactattaaagt-------agttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaa 224  Q
    | |||||||||||||| |||||||||||||||       |||| |||| |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  42757988 ccttgttggaaaacacgataaactattaaagtagttatgagttatgacatttggtttatcacatgtgaatttaatgataaataaaaacatttaagtaaaa 42757889  T
Q  225 cacacacaaatgtttatatactttaatt 252  Q
     |||||| || |||||||||||||||||    
T  42757888 -acacac-aacgtttatatactttaatt 42757863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 98 - 252
Target Start/End: Complemental strand, 22646121 - 22645967
Alignment:
Q  98 tttagtcaatttattattgttttctcaagtttacctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaattta 197  Q
    |||||| |||||||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||    
T  22646121 tttagtgaatttattattgttttctcaagtttaaccttgttgaaaaacaccataaactattaaagtagttgtgacttttgatttatcacatgtgaattta 22646022  T
Q  198 atgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    |||||||||||||| |||| ||||||| |||||||||| ||||||||||||||||    
T  22646021 atgataaataaggatattttagtaaaaaacacacaaatatttatatactttaatt 22645967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 12096466 - 12096296
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagt-caatttattattgttttctcaagtttacctttgttggaaaaca 146  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |  | |||| |||| ||||||||||| |||  |||||| ||||||    
T  12096466 ttttcttttgatgttttaggacttcaactatattccaaaacatttgatgttttaatatattttaatattcttttctcaagtgtactcttgttgaaaaaca 12096367  T
Q  147 ca--at-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattt 216  Q
    ||  || ||||||||||| |||| |||||| |||  |||||||||| ||||||||| ||||| ||||||||||    
T  12096366 caccataaaactattaaa-tagtcgtgacc-ttgacttatcacatgcgaatttaattataaagaaggacattt 12096296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 22528023 - 22528180
Alignment:
Q  54 tttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacaca--ata 151  Q
    |||||| |||||| ||||||| ||||  ||||||  ||||||||||||||  ||||| || | || |  ||| ||||||||||||| ||||||||  |||    
T  22528023 tttgatattttaggacttcaattatactccaaaatatttgatgttttagtacatttaataattttattccaaatttacctttgttgaaaaacacaccata 22528122  T
Q  152 aa-ctattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataa 208  Q
    || ||||||||  ||||||||||||||| ||||||||| |||||||||| ||||||||    
T  22528123 aaactattaaaagagttgtgacctttggcttatcacatatgaatttaatcataaataa 22528180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 41610694 - 41610625
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    ||||| |||||||  |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  41610694 tactctctccatttcttttcttttgatgttttagaacttaaactttattccaaaacttttgatgttttag 41610625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 42793040 - 42793109
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    ||||| |||||||| |||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||    
T  42793040 tactcactccattccttttcttttgatgttttagagcttaaactttattccaaaacttttgatgttttag 42793109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 41610370 - 41610405
Alignment:
Q  30 taatactccctccattcattttcttttgatgtttta 65  Q
    ||||||||||||||||| ||||||||||||||||||    
T  41610370 taatactccctccattccttttcttttgatgtttta 41610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 29875232 - 29875198
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  29875232 atactccctccattccttttcttttgatgttttag 29875198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 42793596 - 42793562
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  42793596 atactccctccattccttttcttttgatgttttag 42793562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 12398946 - 12398979
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  12398946 tactccctccattccttttcttttgatgttttag 12398979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 23090576 - 23090543
Alignment:
Q  32 atactccctccattcattttcttttgatgtttta 65  Q
    ||||||||||||||| ||||||||||||||||||    
T  23090576 atactccctccattccttttcttttgatgtttta 23090543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 42757805 - 42757838
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  42757805 tactccctccattccttttcttttgatgttttag 42757838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 594362 - 594330
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatat 80  Q
    |||||||||||||||||| ||||||||||||||    
T  594362 ttttcttttgatgttttaaaacttcaactatat 594330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 4434783 - 4434847
Alignment:
Q  36 tccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgtttt 100  Q
    ||||||||||  ||||||||||||||||||| ||||||||| |||  ||| |  |||||||||||    
T  4434783 tccctccatttcttttcttttgatgttttaggacttcaactttatttcaagatatttgatgtttt 4434847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 29 - 252
Target Start/End: Complemental strand, 33838010 - 33837787
Alignment:
Q  29 ataatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtt 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  33838010 ataatactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtt 33837911  T
Q  129 tacctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacaca 228  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  33837910 tacccttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaata 33837811  T
Q  229 cacaaatgtttatatactttaatt 252  Q
    ||||||||||||||||||||||||    
T  33837810 cacaaatgtttatatactttaatt 33837787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 2509073 - 2508854
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  2509073 tactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 2508974  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  2508973 cttgttggaaaacacagtaaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatacaca 2508874  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  2508873 aatgtttatatactttaatt 2508854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 45334553 - 45334334
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  45334553 tactccctccattccttttcttttgatgttttagaactttaactatattccaaaacttttgatgttttagtgaatttgttattgttttttcaagtttacc 45334454  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  45334453 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatacaca 45334354  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  45334353 aatgtttatatactttaatt 45334334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 33 - 251
Target Start/End: Original strand, 28378947 - 28379165
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28378947 tactccctccattatttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 28379046  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| || ||||    
T  28379047 cttgttggaaaacacaataaactattaaagtagttgtgacctttgatttatcgcatgtgaatttaaggataaataaggacatttaagtaaaaaacgcaca 28379146  T
Q  233 aatgtttatatactttaat 251  Q
    |||||||||||||||||||    
T  28379147 aatgtttatatactttaat 28379165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 25106210 - 25106430
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||| ||||||||||    
T  25106210 atactctctccattccttttcttttgatgttttagaacttcaactatattccaaaatttttgatgttttagtgaatttatgattgttttttcaagtttac 25106309  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  25106310 ccttgatggaaaacacaataaactattaaagtagttgtgacttttggtttatcacatgtgaatttaatgataaataaggaaatttaaataaaaaacacac 25106409  T
Q  232 aaatgtttatatactttaatt 252  Q
    || ||||||||||||||||||    
T  25106410 aagtgtttatatactttaatt 25106430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 28 - 252
Target Start/End: Complemental strand, 38495754 - 38495530
Alignment:
Q  28 gataatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagt 127  Q
    |||| |||| ||||||||| ||||||| ||||||||||||||||||||||||| | |||| |||||||||||| || |||||||||||||||||||||||    
T  38495754 gatagtacttcctccattctttttcttgtgatgttttagaacttcaactatattctaaaatttttgatgttttggtgaatttattattgttttctcaagt 38495655  T
Q  128 ttacctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacac 227  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  38495654 ttacccttgttggaaaacacaataaactattaaagtagttatgacatttggtttatcacatgtgaatttaatgataaataaggatatttaagtaaaaaac 38495555  T
Q  228 acacaaatgtttatatactttaatt 252  Q
    ||||||||||||||||| |||||||    
T  38495554 acacaaatgtttatatattttaatt 38495530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 31 - 252
Target Start/End: Original strand, 9739983 - 9740205
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||  |||||  ||||||||||||||||||| | |||||||||||| |||||||||||||    
T  9739983 aatactccctccattccttttcttttgatgttttagaacttcatgtatatttcaaaacttttgatgttttactgaatttattattgctttctcaagttta 9740082  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacac 229  Q
     | |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||    
T  9740083 tccttgttgaaaaacacaataaactattaaagtagttgtgacatttggtttatcacatgtgaatttaatgataaataatgacatttaagtaaaaaaaaac 9740182  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||||    
T  9740183 acaaatgtttatatactttaatt 9740205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 38 - 252
Target Start/End: Complemental strand, 13469777 - 13469566
Alignment:
Q  38 cctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgt 137  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||    
T  13469777 cctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatattttagtaaatttataattgttttctcaagtttacccttgt 13469678  T
Q  138 tggaaaacacaataaactattaaagtagttgtgacctttg--gtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaat 235  Q
    |||||||||||||||||||||||||| |    ||  ||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  13469677 tggaaaacacaataaactattaaagttg----gatgtttgttgtttatcacatgtgaatttaatgataaataaggacatttaaggaaaa-acacacaaat 13469583  T
Q  236 gtttatatactttaatt 252  Q
     ||||||||||||||||    
T  13469582 atttatatactttaatt 13469566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 77 - 252
Target Start/End: Complemental strand, 2626472 - 2626296
Alignment:
Q  77 atataccaaaacttttgatgttttagtcaatttattatt-gttttctcaagtttacctttgttggaaaacacaataaactattaaagtagttgtgacctt 175  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  2626472 atattccaaaacttttgatgttttagtgaatttattatttgttttctcaagtttacccttgttggaaaacacaataaactattaaagtaattgtgacctt 2626373  T
Q  176 tggtttatcacatgtg-aatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  2626372 tggtttatcacatgtgaaatttaatgataaataaggacatttaaataaaa-acacacaaatgtttatatactttaatt 2626296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 32183760 - 32183539
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||  ||||| |||| ||||| |||||||||    
T  32183760 atactcccttcattttttttcttttgatgttttagaacttcaactatattccaaaatatttgatgttttagtatatttaatatttttttcccaagtttac 32183661  T
Q  132 ctttgttggaaaacaca--ataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacac 229  Q
    | |||||||||||||||  |||||||||| ||| ||||| ||||||||| |||||||||||||||||||| |||||||||||||||| |||  || |||     
T  32183660 ccttgttggaaaacacaccataaactatt-aaggagttgcgacctttggcttatcacatgtgaatttaatcataaataaggacattttagtccaaaacat 32183562  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||| ||| ||| ||||||||    
T  32183561 acaaatatttctatgctttaatt 32183539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 27793472 - 27793345
Alignment:
Q  29 ataatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtt 128  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  27793472 ataatactccttccattcattttcttttgatgttttagatcttcaactatattccaaaacttttaatgttttagtgaatttattattgttttctcaagtt 27793373  T
Q  129 tacctttgttggaaaacacaataaacta 156  Q
    |||  |||||||||||||||||||||||    
T  27793372 tactcttgttggaaaacacaataaacta 27793345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 27793197 - 27793102
Alignment:
Q  155 tattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| ||||| | ||||||||| |||||||| ||||||    
T  27793197 tattaaattagttgtgacatttggtttatcacatgtaaatttaatgataaataaggatatttaaataaaa-atacacaaatg-ttatatacattaatt 27793102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 27024431 - 27024502
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||    
T  27024431 aatactccctccattccttttcttttgatgttttagagcttaaactttattccaaaacttttgatgttttag 27024502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 25979039 - 25978969
Alignment:
Q  30 taatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgtttt 100  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||| |||  |||||| |||||||||||    
T  25979039 taatactccctccatttcttttcttttgatgttttaggacttcaactttatttcaaaacatttgatgtttt 25978969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 8235161 - 8235230
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgtttta 101  Q
    |||||||||||||| |||||||||||||||||||| ||||||| | |||  |||||| ||||||||||||    
T  8235161 atactccctccatttattttcttttgatgttttaggacttcaattttatttcaaaacatttgatgtttta 8235230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 3203492 - 3203370
Alignment:
Q  68 acttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacaca--at-aaactattaaagta 164  Q
    |||||||||||||   ||||  ||||||||||||||  ||||| |||| |||||||||||||| |||||||| ||||||||  || |||||||||||  |    
T  3203492 acttcaactatattttaaaatatttgatgttttagtatatttaatatt-ttttctcaagtttatctttgttgaaaaacacaccataaaactattaaatga 3203394  T
Q  165 gttgtgacctttggtttatcacat 188  Q
    || ||||| ||||| |||||||||    
T  3203393 gtcgtgacatttggcttatcacat 3203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 38495472 - 38495505
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||||||||||||||||||||||    
T  38495472 tactccctccattcattttcttttgatgttttag 38495505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 2626714 - 2626667
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgat 95  Q
    |||| |||| || |||||||||||||||||||| ||||||||||||||    
T  2626714 ttttttttttatattttagaacttcaactatattccaaaacttttgat 2626667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 27027689 - 27027655
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  27027689 atactccctccattccttttcttttgatgttttag 27027655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 25106488 - 25106455
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  25106488 tactccctccattccttttcttttgatgttttag 25106455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 28379224 - 28379191
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  28379224 tactccctccattccttttcttttgatgttttag 28379191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 33837729 - 33837762
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  33837729 tactccctccattccttttcttttgatgttttag 33837762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 45334276 - 45334309
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  45334276 tactccctccattccttttcttttgatgttttag 45334309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 9740263 - 9740231
Alignment:
Q  33 tactccctccattcattttcttttgatgtttta 65  Q
    |||||||||||||| ||||||||||||||||||    
T  9740263 tactccctccattccttttcttttgatgtttta 9740231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 13469504 - 13469540
Alignment:
Q  29 ataatactccctccattcattttcttttgatgtttta 65  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  13469504 ataatactccttccattccttttcttttgatgtttta 13469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 47669116 - 47669338
Alignment:
Q  30 taatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttt 129  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  47669116 taatactccctccattccttttcttttgatgttttagaacttcaactatattccaaaatttttgatgttttagtgaatttgttattgttttctcaagttt 47669215  T
Q  130 acctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacac 229  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  47669216 acccttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatac 47669315  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||||    
T  47669316 acaaatgtttatatactttaatt 47669338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 4817268 - 4817488
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  4817268 atactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttatcattgttttctcaagtttac 4817367  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | ||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4817368 ccttgttggaaaacacaataaactattaaggtagttgtgatatttagtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 4817467  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  4817468 aaatgtttatatactttaatt 4817488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 33 - 253
Target Start/End: Complemental strand, 10737978 - 10737758
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10737978 tactcccttcattccttttcttttaatgttttagaacttcaactatattctaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 10737879  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  10737878 cttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatctgaatttaatgataaataaggacatttaagtaaaaaacacaca 10737779  T
Q  233 aatgtttatatactttaattg 253  Q
    ||| |||||||||||||||||    
T  10737778 aatatttatatactttaattg 10737758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 46220259 - 46220478
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  46220259 tactccctctattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttacc 46220358  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | |||||    
T  46220359 cttgttggaaaacacaataaactattaaagtagttgtgacctttagtttatcacatgtgaatttaatgataaataaggacaattaagtaaaaaatacaca 46220458  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  46220459 aatgtttatatactttaatt 46220478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 9831503 - 9831722
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  9831503 tactccctccattccttttcttttgatgttttagaatttcaactatattccaaaacttttgatgttttagtgaatttgttattattttctcaagtttacc 9831602  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||    
T  9831603 cttgttggaaaacacaataaactattaaaatagttgtgacctttggtttatcacatgtgaatttaatgataaataagaacatttaagtaaaaaatacaca 9831702  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  9831703 aatgtttatatactttaatt 9831722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 18126851 - 18127069
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18126851 tactccctccattccttttcttttgatgttttagaacttcaactatattctaaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 18126950  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  18126951 cttgttggaaaacacaacaaactatt-aagtagttgtgacttttggtttatcacatgtgaatttaatgataaaaaagaatatttaagtaaaacacacaca 18127049  T
Q  233 aatgtttatatactttaatt 252  Q
    ||||||||||||||||||||    
T  18127050 aatgtttatatactttaatt 18127069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 48564817 - 48565036
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||  |||||||| ||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  48564817 atactccctccattacttttcttt-gatgttttaaaacttcaactatattccaaaaattttgatgttttagtgaatttattattgttttctcaagtttac 48564915  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48564916 ccttgatggaaaacacaataaactattaaagtagttgtgacttttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacacac 48565015  T
Q  232 aaatgtttatatactttaatt 252  Q
    || ||||||||||||||||||    
T  48565016 aagtgtttatatactttaatt 48565036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 3384870 - 3384653
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3384870 tactcccttcattctttttcttttgatgttttagaacctcaactattt--caaaacttttgatgttttagtgaatttattattgttttctcaagtttacc 3384773  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  3384772 cttgttggaaaacacaataaactattaaagtagttgtgacctttgatttatcacatgtgaatttaatgataaataaaaacatttaagtaaaaaacacaca 3384673  T
Q  233 aatgtttatatactttaatt 252  Q
    || |||||||||||||||||    
T  3384672 aacgtttatatactttaatt 3384653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 29 - 252
Target Start/End: Original strand, 4055480 - 4055703
Alignment:
Q  29 ataatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtt 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||    
T  4055480 ataatactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaattaattattgttttctcaagtt 4055579  T
Q  129 tacctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacaca 228  Q
    |||| || ||||||||||||||  ||| ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  4055580 tacccttattggaaaacacaattcactgttaaagtagttgtaacatttggtttatcacatgtgaatttaatgataaataaagacatttaagtgaaaaaca 4055679  T
Q  229 cacaaatgtttatatactttaatt 252  Q
    ||||||| ||||||||||||||||    
T  4055680 cacaaatatttatatactttaatt 4055703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 34 - 252
Target Start/End: Original strand, 7414208 - 7414427
Alignment:
Q  34 actccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacct 133  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||   |||  ||||||||||||||| ||||||||||||||||||||||||||||     
T  7414208 actccctccattcatttttttttgatgttttagaacttcaactatattttaaattttttgatgttttagtgaatttattattgttttctcaagtttaccc 7414307  T
Q  134 ttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacacaca 232  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||    
T  7414308 ttgttgaaaaacacaataaactattaaagtagttgtgacatttggtttatcatatgtgaatttaatgataaataaggatatttaagtaaaaaaacacaca 7414407  T
Q  233 aatgtttatatactttaatt 252  Q
    ||| ||||||||||||||||    
T  7414408 aatatttatatactttaatt 7414427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 8889457 - 8889662
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacac 147  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||    
T  8889457 ttttttttttatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttacccttgttgaaaaacac 8889556  T
Q  148 aataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacacacaaatgtttatatact 246  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||||||||    
T  8889557 aataaactattaaagtagttgtgacttttagtttatcacatgtgaatttaatgataaataatgacatttaagtaaaaaaacacacaaatgtatatatact 8889656  T
Q  247 ttaatt 252  Q
    ||||||    
T  8889657 ttaatt 8889662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 53 - 252
Target Start/End: Original strand, 39241172 - 39241371
Alignment:
Q  53 ttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacct-ttgttggaaaacacaata 151  Q
    |||| ||||||||||| |||||||||||  ||||||||||| ||||| ||| |||||||||||||| | ||||||||  || |||||| ||||||| |||    
T  39241172 ttttaatgttttagaa-ttcaactatatttcaaaacttttgttgtttcagtgaatttattattgttgtatcaagttttactcttgttgaaaaacaccata 39241270  T
Q  152 aactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaat 251  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||  || ||| |||||||||| |||||||||||||||    
T  39241271 aactattaaagtagttgtgacttttgatttatcacatgtgaatttaatgataaataagaatattttggtcaaaaacacacaaatatttatatactttaat 39241370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 1236307 - 1236208
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  1236307 tactccctccattcattttcttttgatgttttagaactttaactatattccaaaacttttgatggtttagtgaatttattattgttttctcaagtttacc 1236208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 1236208 - 1236128
Alignment:
Q  172 cctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1236208 cctttgatttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactttaatt 1236128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 1749604 - 1749521
Alignment:
Q  29 ataatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttatt 112  Q
    |||||||| |||| |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  1749604 ataatacttcctctattccttttcttttgatgttttagaactttaattatataccaaaacttttgatgttttagtgaatttatt 1749521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 26842462 - 26842623
Alignment:
Q  56 tgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacaca---ataa 152  Q
    |||||||||||||||||||||||||  |||||  ||||||||||||||  ||||| |||  |||| ||||||||| | |||||| ||||||||     ||    
T  26842462 tgatgttttagaacttcaactatatttcaaaatatttgatgttttagtatatttaatat--ttttttcaagtttatccttgttgaaaaacacatcgtaaa 26842559  T
Q  153 actattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattt 216  Q
    |||||| ||| | ||||||| ||||  |||||||||||||||||||| ||||||||||| ||||    
T  26842560 actattcaagaaattgtgacatttgacttatcacatgtgaatttaatcataaataaggatattt 26842623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 33020206 - 33020275
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    |||||||||||||| |||||||||||||||||||| ||| |||| | | |||||||||||||||||||||    
T  33020206 tactccctccattccttttcttttgatgttttagagcttaaacttttttccaaaacttttgatgttttag 33020275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 49112535 - 49112332
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacac 147  Q
    |||||||||||||||    ||||| ||||||||   ||||  ||||||||||||||  |||||  ||||||||   || |||||| |||||| |||||||    
T  49112535 ttttcttttgatgtt----aactttaactatattttaaaatatttgatgttttagtatatttaacattgtttttctaaatttacccttgttgaaaaacac 49112440  T
Q  148 aat---aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatata 244  Q
    |     |||||||||||   ||| |||||||| | ||| |||||||||||||||| ||||||||||| |||| |||  || ||| |||||| ||| ||||    
T  49112439 accttaaaactattaaaagtgttatgacctttagcttaccacatgtgaatttaatcataaataaggatattttagtccaaaacatacaaatatttttata 49112340  T
Q  245 ctttaatt 252  Q
    ||||||||    
T  49112339 ctttaatt 49112332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 205
Target Start/End: Complemental strand, 33846936 - 33846758
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaattt-attattgttttctcaagttta 130  Q
    ||||||||||||||  ||||||||||||||||||  ||||||| | |||   ||||  |||||||||| |||  |||| ||| || ||| ||||||||||    
T  33846936 atactccctccattt-ttttcttttgatgttttaagacttcaagtgtattttaaaatatttgatgtttcagtatatttaatttttttttcctcaagttta 33846838  T
Q  131 cctttgttggaaaacaca----at-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaa 205  Q
    || |||||  ||||||||    || |||||||||||  ||||||||| ||||  |||| ||||||||||||||| |||||    
T  33846837 cccttgttaaaaaacacacaccataaaactattaaataagttgtgacatttgacttattacatgtgaatttaattataaa 33846758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 205
Target Start/End: Original strand, 33947042 - 33947220
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaattt-attattgttttctcaagttta 130  Q
    ||||||||||||||  ||||||||||||||||||  ||||||| | |||   ||||  |||||||||| |||  |||| ||| || ||| ||||||||||    
T  33947042 atactccctccattt-ttttcttttgatgttttaagacttcaagtgtattttaaaatatttgatgtttcagtatatttaatttttttttcctcaagttta 33947140  T
Q  131 cctttgttggaaaacaca----at-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaa 205  Q
    || |||||  ||||||||    || |||||||||||  ||||||||| ||||  |||| ||||||||||||||| |||||    
T  33947141 cccttgttaaaaaacacacaccataaaactattaaataagttgtgacatttgacttattacatgtgaatttaattataaa 33947220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 10737700 - 10737734
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  10737700 atactccctccattccttttcttttgatgttttag 10737734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 37875854 - 37875785
Alignment:
Q  182 atcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    |||| ||||||||||||||||||||||||| |||| ||| ||| ||| |||||| ||| ||||| ||||||    
T  37875854 atcaaatgtgaatttaatgataaataaggatattttagtcaaa-acatacaaatatttctatacattaatt 37875785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 46220537 - 46220503
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  46220537 atactccctccattccttttcttttgatgttttag 46220503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 37875723 - 37875760
Alignment:
Q  29 ataatactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||||||  |||||||||||||||||||    
T  37875723 ataatactccctccatttcttttcttttgatgttttag 37875760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 47669396 - 47669363
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  47669396 tactccctccattccttttcttttgatgttttag 47669363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 48565096 - 48565063
Alignment:
Q  31 aatactccctccattcattttcttttgatgtttt 64  Q
    |||||||||||||||| |||||||||||||||||    
T  48565096 aatactccctccattccttttcttttgatgtttt 48565063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 1236071 - 1236103
Alignment:
Q  34 actccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||| |||||||||||||||||||    
T  1236071 actccctccattccttttcttttgatgttttag 1236103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 45590741 - 45590961
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  45590741 atactccctccattcattttcttttgatgttttagaacttcaactatattctaaaacttttgatgttttagtgaattcattattgttttatcaagtttac 45590840  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  45590841 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatatgaatttaatgataaataagaacatttaagtaaaaaacacac 45590940  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  45590941 aaatgtttatatactttaatt 45590961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 8956054 - 8955834
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  8956054 atactccctccattcctttttttttgatgttttagaacttcaactatattacaaaacttttgatgttttagtgaatttgttattgttttatcaagtttac 8955955  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  8955954 ccttattggaaaacacaataaattattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatacac 8955855  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  8955854 aaatgtttatatactttaatt 8955834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 31 - 252
Target Start/End: Complemental strand, 33288684 - 33288462
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    |||||||||||||||  |||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33288684 aatactccctccatttcttttcttttgatattttagaacttcaattatattccaaaacttttgatgttttagtgaatttattattgttttctcaagttta 33288585  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacac 229  Q
    ||  ||||||||||||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||    
T  33288584 cccatgttggaaaacacaatatactgataaagtagttgtgacatttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaaatac 33288485  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||||    
T  33288484 acaaatgtttatatactttaatt 33288462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 43 - 241
Target Start/End: Original strand, 34334342 - 34334540
Alignment:
Q  43 attcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaa 142  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||| ||    
T  34334342 attccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgctttagtgaatttattattgtcttctcaagtttacccttgttgaaa 34334441  T
Q  143 aacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttat 241  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  34334442 aacacaataaactattaaagtagttgtgatctttggtttatcacatgtgaatttaatgataaataaagacatttaagtaaaaaacatacaaatgtttat 34334540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 18835705 - 18835926
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttat--tattgttttctcaagttta 130  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| |||  |||||||||||||| ||||    
T  18835705 tactcccttcatttattttcttttgatgttttagaacttcaactatattccaaaactttcgatgttttagtgaatatatattattgttttctcaaattta 18835804  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacaca 230  Q
     | ||||| |||||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  18835805 tccttgttagaaaacatcataaactattaaagtagttgtgacatttgatttatcacatgtgaatttaatgataaataaggacattttagttaaaaacaca 18835904  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||| |||||||| |||||||    
T  18835905 caaatatttatatattttaatt 18835926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 99 - 252
Target Start/End: Original strand, 36971115 - 36971267
Alignment:
Q  99 ttagtcaatttattattgttttctcaagtttacctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaa 198  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36971115 ttagtgaatttattattgttttctgaagtttacctt-gttggaaaacacaataaactattaaaatagttgtgacctttggtttatcacatgtgaatttaa 36971213  T
Q  199 tgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  36971214 tgataaataaggatatttaagtaaaaaacacacaaatgtttatatactttaatt 36971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 50774325 - 50774116
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatg-----ttttagtcaatttattattgttttctcaagtttacctttgttggaa 142  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||||||      ||||||| |||||||||||||||||||||||||||  |||||||||    
T  50774325 tttttttttgatgttttagaactttaactatatttcaaaacttttgatacagtattttagtgaatttattattgttttctcaagtttactcttgttggaa 50774226  T
Q  143 aacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttata 242  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||   |||||||||||| |||||||||| ||||||    
T  50774225 aacacaataaactattaaattagtcgtgacttttggtttatcacatgtaaatttaatgataaataagattatttaagtaaaaaacacacaaatatttata 50774126  T
Q  243 tactttaatt 252  Q
    ||||||||||    
T  50774125 tactttaatt 50774116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 39 - 252
Target Start/End: Original strand, 49162108 - 49162307
Alignment:
Q  39 ctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgtt 138  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  49162108 ctccattcattttcttttgatgtttcagaacttcaactatattccaaaatttttgatgttttagtgaatttattattgttttctcaattttacc-ttgtt 49162206  T
Q  139 ggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtt 238  Q
    ||||||||| ||||||||||||||||||||| ||||||||||             ||||||||||||||||||||||| |||||||  ||||||||| ||    
T  49162207 ggaaaacaccataaactattaaagtagttgtaacctttggtt-------------tttaatgataaataaggacattttagtaaaaatcacacaaatatt 49162293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 26025801 - 26025586
Alignment:
Q  32 atactccctccattcatttt-cttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    ||||||||||||||  |||| ||||||||||||||| ||||||||||||| ||||||  |||||  |||||||  ||||| |||| ||||| ||||||||    
T  26025801 atactccctccatttttttttcttttgatgttttaggacttcaactatattccaaaatatttgacattttagtatatttaatatt-ttttcccaagttta 26025703  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacaca 230  Q
    || |||||| ||||||||     | || ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||  || ||| |    
T  26025702 cccttgttgaaaaacaca-----ccataaaactagttgtgacctttggcttatcacatgtgaatttaatcataaataaggacattttagtccaaaacata 26025608  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||| ||| ||||||||||||    
T  26025607 caaatatttctatactttaatt 26025586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 30469448 - 30469353
Alignment:
Q  30 taatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaa 125  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  30469448 taatactcccttcattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaa 30469353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 39481900 - 39482006
Alignment:
Q  30 taatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttt 129  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  39481900 taatattccctccatttcttttcttttgatgttttagaacttcaactattttccaaaacttttgatgttttagtaaatttattattgttttctcaggttt 39481999  T
Q  130 acctttg 136  Q
    |||||||    
T  39482000 acctttg 39482006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 39482000 - 39482081
Alignment:
Q  171 acctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||| ||| | |||||||| ||||||||||||||||    
T  39482000 acctttggtttatcacatgtgaatttaatactaaataaggacattttagtcaaaaatacacaaatatttatatactttaatt 39482081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 19256183 - 19256255
Alignment:
Q  30 taatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||    
T  19256183 taatactccctccattccttttcttttgatgttttagagcttaaactttattccaaaacttttgatgttttag 19256255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 30469343 - 30469271
Alignment:
Q  180 ttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||||||| || ||||||||||||||| | |||||||| ||||||||||||||||    
T  30469343 ttatcacatgtgaatttaatgataaacaatgacatttaagtaaaaaatacacaaatatttatatactttaatt 30469271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 33109163 - 33108999
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacac 147  Q
    ||||||||| ||||||||| |||||||||||||   ||||   |||||||||||||  ||||| |||| |||||| ||||||| | |||||  |||||||    
T  33109163 ttttcttttaatgttttaggacttcaactatattttaaaataattgatgttttagtatatttaatatttttttcttaagtttatccttgttaaaaaacac 33109064  T
Q  148 a--ataaa-ctattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataag 209  Q
    |  ||||| ||||||||  ||||||||||||||  |||| |||||| |||||||| |||||||||    
T  33109063 accataaaactattaaatgagttgtgacctttgtcttattacatgtaaatttaattataaataag 33108999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 36968353 - 36968407
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36968353 tttttttttgatgttttagaacttcaactatattccaaaacttttgatgttttag 36968407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 36016278 - 36016326
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatat 80  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36016278 atactccctccattccttttcttttgatgttttagaacttcaactatat 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 19257144 - 19257103
Alignment:
Q  26 tagataatactccctccattcattttcttttgatgttttaga 67  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  19257144 tagatactactccctccattccttttcttttgatgttttaga 19257103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 45591019 - 45590986
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||||||||||||||||||||||    
T  45591019 tactccctccattcattttcttttgatgttttag 45590986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 31 - 252
Target Start/End: Complemental strand, 27312395 - 27312173
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  27312395 aatactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacatttgatgttttagtgaatttattattgttttctcaagttta 27312296  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacac 229  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  27312295 cccttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaaacac 27312196  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||| ||||||||||||||||    
T  27312195 acaaatatttatatactttaatt 27312173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 32274433 - 32274653
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  32274433 atactccctccattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttac 32274532  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||| | ||||    
T  32274533 ccttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcatatgtgactttaatgataaatacggacatttaagtaaaaaatacac 32274632  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  32274633 aaatgtttatatactttaatt 32274653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 35 - 216
Target Start/End: Complemental strand, 8504977 - 8504796
Alignment:
Q  35 ctccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctt 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||||||| ||||||| |    
T  8504977 ctccctccattcattttcttttgatgttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttattattattttctcaggtttaccct 8504878  T
Q  135 tgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattt 216  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  8504877 tgttgaaaaacacaataaactattaaagtagttgtgacctttggtttattatatgtgaatttaatgataaataaggacattt 8504796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 31 - 252
Target Start/End: Complemental strand, 29452822 - 29452600
Alignment:
Q  31 aatactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttatta-ttgttttctcaagttt 129  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||||| | |||  | ||||||||||||| ||||||||| ||||||||||||||||    
T  29452822 aatactccctccatttcttttcttctgatgttttagaacttcaactatattctaaatttcttgatgttttagtgaatttattacttgttttctcaagttt 29452723  T
Q  130 acctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacac 229  Q
    ||  |||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| ||| ||| ||||    
T  29452722 acacttgttggaaaacaccataaactattaaaatagttgtgacctttgatttatcacatgtgaatttaatgataaataatgactttttagtcaaaaacac 29452623  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||| ||||||||||||||||    
T  29452622 acaaatatttatatactttaatt 29452600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 94 - 252
Target Start/End: Original strand, 2543142 - 2543300
Alignment:
Q  94 atgttttagtcaatttattattgttttctcaagtttacctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaa 193  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2543142 atgttttagtgaatttattattgttttctcaagtttacccttgttgaaaaacacaataaactattaaagtagttgtgacatttggtttatcacatgtgaa 2543241  T
Q  194 tttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||    
T  2543242 tttaatgataaataaagacatttaagtaaaaaacacacagatgtttatatactttaatt 2543300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 40 - 208
Target Start/End: Original strand, 5003889 - 5004057
Alignment:
Q  40 tccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttg 139  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  5003889 tccattcatttttttttgatgttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttattattgttttctcaagtttacccttgttg 5003988  T
Q  140 gaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataa 208  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||| |||||||    
T  5003989 gaaaacacaataaactattaaagtagttttgacatttgatttatcacaggtgaatttaatgttaaataa 5004057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 31171267 - 31171048
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||  ||||||||||||| ||||||| ||||| | ||| ||||||| || |||||| |||| |||||||||||||||||||||||||| |    
T  31171267 tactccctccatttcttttcttttgatgatttagaaattcaaatgtattccaaaacattagatgttgtagtgaatttattattgttttctcaagtttatc 31171168  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
    ||| |||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | ||| | |||||    
T  31171167 tttattggaaaacaccttaaactattaaaatagttgtgacctttggtttatcacatgtgaatttaatgataaataaggatattttaatcaaaaatacaca 31171068  T
Q  233 aatgtttatatactttaatt 252  Q
    ||| ||||||||||||||||    
T  31171067 aatatttatatactttaatt 31171048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 7156503 - 7156295
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||  ||||||||||||||||||||   |||||||||| |||||||||| ||||||||||| ||||||||||||||||||             
T  7156503 atactccctccatttcttttcttttgatgttttagacaatcaactatattccaaaactttagatgttttagtgaatttattattgttttct--------- 7156413  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
       ||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||    
T  7156412 ---tgttggaaaacaccataaactattaaagtaattgtgacatttggtttatcacatgtgaatttaatgataaataaggatattttagtcaaagacacac 7156316  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||| ||||||||||||||||    
T  7156315 aaatatttatatactttaatt 7156295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 12174699 - 12174799
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| ||||||||| |||||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12174699 atactccctccattccttttcttttaatgttttagaactttaaatatattccaaaacttttgatgttttagtgaatttattattgttttctcaagtttac 12174798  T
Q  132 c 132  Q
    |    
T  12174799 c 12174799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 18741947 - 18742165
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||||||  ||||||||||||||||||| ||||||||| |||  |||||| ||||||||||||||  ||||| |||||| ||||||| ||||||    
T  18741947 tactccctccatttcttttcttttgatgttttaggacttcaactttatttcaaaacatttgatgttttagtatatttaatattgtattctcaaatttacc 18742046  T
Q  133 tttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacaca 232  Q
     |||||| ||||||||    |||   |||  |||| |||| ||||| |||| ||||| ||||||| ||||| ||||||| |||| ||| ||| |||||||    
T  18742047 cttgttgaaaaacacaccgtactgcaaaaagagttatgacttttggcttatgacatgagaatttattgatatataaggatattttagtcaaa-acacaca 18742145  T
Q  233 aatgtttatatactttaatt 252  Q
    ||| ||| ||||| ||||||    
T  18742146 aatatttttatacattaatt 18742165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 29302555 - 29302501
Alignment:
Q  26 tagataatactccctccattcattttcttttgatgttttagaacttcaactatat 80  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  29302555 tagatactactccctccattccttttcttttgatgttttagaacttcaactatat 29302501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 5008308 - 5008350
Alignment:
Q  210 gacatttaagtaaaacacacacaaatgtttatatactttaatt 252  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  5008308 gacatttaagtaaaaaacacacaaatatttatatactttaatt 5008350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 32274711 - 32274678
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||||||||||||||||||||||    
T  32274711 tactccctccattcattttcttttgatgttttag 32274678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 2543359 - 2543325
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  2543359 atactccctccattcgttttcttttgatgttttag 2543325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 8504728 - 8504766
Alignment:
Q  28 gataatactccctccattcattttcttttgatgttttag 66  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  8504728 gatactactccctccattccttttcttttgatgttttag 8504766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 27312113 - 27312147
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  27312113 atactccctccattccttttcttttgatgttttag 27312147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 35 - 252
Target Start/End: Original strand, 15233757 - 15233974
Alignment:
Q  35 ctccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctt 134  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| |    
T  15233757 ctccctctattccttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagtgaatttgttattgttttctcaagtttaccct 15233856  T
Q  135 tgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaa 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||    
T  15233857 tgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaatatacaaa 15233956  T
Q  235 tgtttatatactttaatt 252  Q
    ||||||||||||||||||    
T  15233957 tgtttatatactttaatt 15233974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 35793184 - 35792965
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  35793184 atactccctccattctttttcttttgatgttttagaacttcaactatattccaaaacttttgatgttttagagaatttattattgtttt-tcaagtttac 35793086  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  35793085 ccttgttggaaaacacaataaactattaaagtagttgtgacatttggtttatcgcatgtgaatttaatgataaatcaggacatttaagtaaaaaacacac 35792986  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||||||||||||||||||||    
T  35792985 aaatgtttatatactttaatt 35792965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 32 - 252
Target Start/End: Complemental strand, 43041127 - 43040907
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  43041127 atactccctccattccttttcttttgatgttttaaaacttcaactatattccaaaacttttgatgttttagtgaatttattattgttttctcaattttac 43041028  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacac 231  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||    
T  43041027 ccttgttggaaaacaccataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacattttagtaaaaatcacac 43040928  T
Q  232 aaatgtttatatactttaatt 252  Q
    |||| |||||||| |||||||    
T  43040927 aaatatttatatattttaatt 43040907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 41252414 - 41252635
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||     
T  41252414 atactccctccattccttttctttttatgttttagaacttcaaatatattccaaaacttttgatgttttagtgaatttattattgtgttctcaagtttat 41252513  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagt-aaaacacaca 230  Q
    | ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  41252514 ccttgttggaaaatacaataaactattaaagtagttgtgacatttgttttatcacatgtgaatttaatgataaataaggacatttaagtaaaaaaacaca 41252613  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||||||||||||||||||||    
T  41252614 caaatgtttatatactttaatt 41252635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 41642891 - 41643113
Alignment:
Q  33 tactccctccattcattttcttttgatgtttt-agaacttcaactatata--ccaaaacttttgatgttttagtcaatttattattgttttctcaagttt 129  Q
    |||||||||||||  ||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  41642891 tactccctccatttcttttcttttgatgtttttagaatttcaactatatattccaaaacttttgatgttttagtgaatttattattgttttctcaagttt 41642990  T
Q  130 acctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacac 229  Q
    ||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  41642991 accttttctggaaaacaccataaactattaaagtagttgtgacctttgatttatcacatgttaatttaatgataaataaggacattttagtaaaaaacac 41643090  T
Q  230 acaaatgtttatatactttaatt 252  Q
    |||||| ||||||||||||||||    
T  41643091 acaaatatttatatactttaatt 41643113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 32 - 228
Target Start/End: Original strand, 31296082 - 31296278
Alignment:
Q  32 atactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttac 131  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  31296082 atactccttccattctttttcttttgatgttttagaacttcaactatattctaaaacttttgatgttttagtgaatttattattgttttctcaaatttac 31296181  T
Q  132 ctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacaca 228  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  31296182 ctttgttgaaaaacacaataaactattaaagtagttgtgatatttggtttatcacatgtgaatttaatgataaataaggacatttaaaaaaaacaca 31296278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 33 - 252
Target Start/End: Complemental strand, 44104833 - 44104604
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacc 132  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  44104833 tactccctccgttccttttcttttgatgttttagaacttcaactatatttcaaaacttttgatgttttagtgaatttattattattttctcaagtttacc 44104734  T
Q  133 ttt-------gttggaaaacacaataaactattaaagtagttgtgaccttt--ggtttatcacatgtgaatttaatgataaataaggacatttaagt-aa 222  Q
     ||       ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| ||    
T  44104733 cttataaattgttggaaaacacaataaactattaaggtagttgtgacctttatggtttatcacatgtgaatttaatgataaataaagacatttaagtaaa 44104634  T
Q  223 aacacacacaaatgtttatatactttaatt 252  Q
    || |||||||||||||||||||||||||||    
T  44104633 aaaacacacaaatgtttatatactttaatt 44104604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 47 - 252
Target Start/End: Complemental strand, 31903642 - 31903439
Alignment:
Q  47 attttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttggaaaaca 146  Q
    ||||| |||||||||||||||||||||| ||||| |||||  ||||||||||||||| |||||||||||||||| ||| ||||||| || ||||||||||    
T  31903642 atttttttttgatgttttagaacttcaaatatattccaaattttttgatgttttagtaaatttattattgttttatca-gtttacccttattggaaaaca 31903544  T
Q  147 caataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatact 246  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  || ||| ||||||||||  |||||||||    
T  31903543 ccataaactattaaagtagttgtgacctttggattatcacatgtgaatttaatgataaataaggacattttggtcaaaaacacacaaat-attatatact 31903445  T
Q  247 ttaatt 252  Q
    ||||||    
T  31903444 ttaatt 31903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 21727684 - 21727891
Alignment:
Q  48 ttttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagtttacctttgttg--gaaaac 145  Q
    |||||||||||||||||||||||||||||||||  |||||  ||||||||||| ||  |  || |||| ||| | ||| |||||| ||||||   |||||    
T  21727684 ttttcttttgatgttttagaacttcaactatatttcaaaatatttgatgttttggtataactaatattttttccccaaatttacccttgttgaaaaaaac 21727783  T
Q  146 acaat-aaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatata 244  Q
    ||||| |||||||||||| ||||||| | ||||  |||||||||||||||||||| ||||| |||||||||| |||  || ||| |||||| ||||||||    
T  21727784 acaataaaactattaaaggagttgtggcatttgccttatcacatgtgaatttaatcataaacaaggacattttagtccaaaacatacaaatatttatata 21727883  T
Q  245 ctttaatt 252  Q
    ||| ||||    
T  21727884 cttcaatt 21727891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 10118729 - 10118660
Alignment:
Q  33 tactccctccattcattttcttttgatgttttagaacttcaactatataccaaaacttttgatgttttag 102  Q
    |||||||||||||| |||||||||||| ||||||| ||| |||| ||| |||||||||||||||||||||    
T  10118729 tactccctccattccttttcttttgatattttagagcttaaactttattccaaaacttttgatgttttag 10118660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 10112338 - 10112372
Alignment:
Q  32 atactccctccattcattttcttttgatgttttag 66  Q
    ||||||||||||||| |||||||||||||||||||    
T  10112338 atactccctccattccttttcttttgatgttttag 10112372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 15234032 - 15233999
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  15234032 tactccctccattccttttcttttgatgttttag 15233999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 41252693 - 41252660
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    ||||| ||||||||||||||||||||||||||||    
T  41252693 tactctctccattcattttcttttgatgttttag 41252660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 43040849 - 43040882
Alignment:
Q  33 tactccctccattcattttcttttgatgttttag 66  Q
    |||||||||||||| |||||||||||||||||||    
T  43040849 tactccctccattccttttcttttgatgttttag 43040882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 44104546 - 44104578
Alignment:
Q  33 tactccctccattcattttcttttgatgtttta 65  Q
    |||||||||||||| ||||||||||||||||||    
T  44104546 tactccctccattccttttcttttgatgtttta 44104578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 44618 - 44837
Alignment:
Q  32 atactccctccattcattttcttt-tgatgttttagaacttcaactatataccaaaacttttgatgttttagtcaatttattattgttttctcaagttta 130  Q
    ||||||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  44618 atactcccttcattccttttctttctgatgtttgagaacttcaactatattccaaaacttttgaggttttagtgaatttattattgttttctcaagttta 44717  T
Q  131 cctttgttggaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaaacacaca 230  Q
    || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||    
T  44718 cccttgttgaaaaacacaataaactattaaagtagttgtgacctttggtttatcacatgtgaatttaatgataaataaggacatttaagtaaa--aaaca 44815  T
Q  231 caaatgtttatatactttaatt 252  Q
    ||||| ||||||||||||||||    
T  44816 caaatatttatatactttaatt 44837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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