View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13754_high_3 (Length: 431)
Name: NF13754_high_3
Description: NF13754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13754_high_3 |
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Alignment Details
Target: chr5 (Bit Score: 380; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 10 - 417
Target Start/End: Original strand, 3337477 - 3337884
Alignment:
| Q |
10 |
attatactatcagggaaatgctgtttatagcgaacaatcacatagcgagaatttcacgagaagtgtttcgcattcccttcgggataattttcatcgtggt |
109 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3337477 |
attatactatcagggaaatgttgtttatagcgaacaatcacatagggagagtttcacgagaagtgtttcgcattcccttcgggataattttcatcgtggt |
3337576 |
T |
|
| Q |
110 |
atatagcactgctaattatatcatcaggaataacccataatttatatctgcacacaaaacttgatagtgttggacgtgaagtattggttggtaaaactca |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
3337577 |
atatagcactgctaattatatcatcaggaataacccataatttatatctgcacacaaaacttgatagtgttggacgtgaagtattagttggtaaaactca |
3337676 |
T |
|
| Q |
210 |
aatctcacggagaataaaaattatattttagatgagtttatatcaacaatgacaactctaatctttcaagtcaattttttaaggatgaatagtgttttag |
309 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
3337677 |
aatctcacatagaataaaaattatattttagatgagtttatatcaacaatgacaactcttatctttcaagtcaattttttaaggatgaatagtgttttag |
3337776 |
T |
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| Q |
310 |
atgagtttacaaaagtaattaacctcttattttacaggtcgattttataactataataacatttgttttatatgcggtacttttcatgcgtgctaaatta |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3337777 |
atgagtttacaaaagtaattaacctcttattttacaggtcgattttataactataataacatttgttttatatgcggtacttttcatgcgtgctaaatta |
3337876 |
T |
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| Q |
410 |
ttcaatat |
417 |
Q |
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|||||||| |
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| T |
3337877 |
ttcaatat |
3337884 |
T |
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