View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13754_low_4 (Length: 370)
Name: NF13754_low_4
Description: NF13754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13754_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 346
Target Start/End: Complemental strand, 32012952 - 32012612
Alignment:
| Q |
1 |
atgcaagctcacacattgcattgcaatcacaaaaccctaaccatcattctcattaattaacaaaatctttgttactctgtgttttcttttttaatatata |
100 |
Q |
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| T |
32012952 |
atgcaagctcacacattgcattgcaaacacaaaaccctaaccatcattctcattaattaacaaaatctttgttattctgttttttcttttttaatatata |
32012853 |
T |
|
| Q |
101 |
ttgttaatgttataatatgtcgcattcacaatccctattattattgttaacccaattcttcaattctctttaccctcctaatttgatcttttcgtaattc |
200 |
Q |
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| T |
32012852 |
ttgttaatgtta--atatgtcgcattcacaatccctattatt---gttaacccaattcttcaattctctttaccctcctaatttgatcttttcgtaattc |
32012758 |
T |
|
| Q |
201 |
ctagtccttatatacatcatgggttgtggcatctcaactatggacgcaaataatgcatccaaggttggacgtcgtttcaatggtcgattacgtcatcaac |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
32012757 |
ctagtccttatatacatcatgggttgtggcatctcaactatggactcaaataatgcatccaaggttggatgtcgtttcaatggtcgattacgtcatcaac |
32012658 |
T |
|
| Q |
301 |
atgccgctgttccgcggcccattgtagacaacaacaagaaatataa |
346 |
Q |
| |
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||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
32012657 |
atgccgctgttccacggcccattgtagacaacaacaagaaatataa |
32012612 |
T |
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