View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13755_low_16 (Length: 327)
Name: NF13755_low_16
Description: NF13755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13755_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 26 - 311
Target Start/End: Complemental strand, 45762359 - 45762074
Alignment:
| Q |
26 |
tgtacgaggaaagaggatggcgaagacgttatttaattttttcactttgaaagtaaaataaattatattgcatatgnnnnnnnnagggattattttgtta |
125 |
Q |
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| T |
45762359 |
tgtacgaggaaaaaggatggcgaagacgttatttaattttttcactttgaaagtaaaataaattatattgcatatgttttttttagggattatcttgtta |
45762260 |
T |
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| Q |
126 |
attaatgttaaattgtggattatgaatttagatgtatttatttcaacatcgatgggttagttagtaatgagtcatgatagcatgcgcgatgatgagtgcg |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45762259 |
attaatgttaaattgtggattatgaatttagatgtatttatttcaacatcgatgggttagttagtaatgagtcatgatagcatgcgcgatgatgagtgcg |
45762160 |
T |
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| Q |
226 |
cgtgcggaagagagggtagacacgtgggttagtgtgacaagacaagaatgtgatgtgatgagtcggttgtcttgtggtggcttatt |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45762159 |
cgtgcggaagagagggtagacacgtgggttagtgtgacaagacaagaatgtgatgtgatgagtcggttgtcttgtggtggcttatt |
45762074 |
T |
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