View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1375R-Insertion-15 (Length: 622)

Name: NF1375R-Insertion-15
Description: NF1375R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1375R-Insertion-15
NF1375R-Insertion-15
[»] chr1 (13 HSPs)
chr1 (9-455)||(51547639-51548086)
chr1 (462-622)||(17445312-17445472)
chr1 (462-620)||(35907551-35907709)
chr1 (462-622)||(3828983-3829142)
chr1 (463-619)||(32982067-32982223)
chr1 (483-622)||(321385-321524)
chr1 (467-622)||(7433449-7433604)
chr1 (464-619)||(26144256-26144411)
chr1 (478-622)||(42310949-42311093)
chr1 (464-589)||(41972314-41972440)
chr1 (462-589)||(33489686-33489815)
chr1 (483-569)||(23313258-23313345)
chr1 (483-548)||(35951427-35951492)
[»] chr7 (20 HSPs)
chr7 (462-622)||(37002152-37002312)
chr7 (462-622)||(34389064-34389224)
chr7 (472-621)||(35090177-35090326)
chr7 (462-622)||(33685563-33685723)
chr7 (486-622)||(38638244-38638380)
chr7 (462-622)||(26624744-26624905)
chr7 (462-621)||(8867740-8867899)
chr7 (463-622)||(5555487-5555646)
chr7 (466-622)||(3114104-3114260)
chr7 (470-622)||(43184476-43184628)
chr7 (463-622)||(8394125-8394284)
chr7 (463-622)||(36630816-36630975)
chr7 (464-619)||(14777118-14777273)
chr7 (487-622)||(36658205-36658340)
chr7 (483-622)||(40920011-40920150)
chr7 (462-622)||(7002724-7002884)
chr7 (462-622)||(7048595-7048755)
chr7 (530-589)||(10868514-10868575)
chr7 (463-553)||(26502810-26502899)
chr7 (463-553)||(26589815-26589904)
[»] chr6 (10 HSPs)
chr6 (462-622)||(28996729-28996889)
chr6 (463-622)||(18339106-18339265)
chr6 (463-622)||(13837821-13837980)
chr6 (463-622)||(34948766-34948925)
chr6 (469-614)||(29743289-29743434)
chr6 (464-619)||(398618-398773)
chr6 (483-617)||(33229349-33229483)
chr6 (462-548)||(24697899-24697985)
chr6 (462-558)||(31028436-31028532)
chr6 (462-499)||(13647016-13647053)
[»] chr5 (20 HSPs)
chr5 (462-622)||(37254640-37254800)
chr5 (462-622)||(31680366-31680526)
chr5 (462-621)||(17332560-17332719)
chr5 (462-619)||(12278871-12279028)
chr5 (477-622)||(33430335-33430480)
chr5 (462-618)||(31501728-31501884)
chr5 (463-622)||(13817977-13818136)
chr5 (463-622)||(10033927-10034086)
chr5 (463-622)||(39657514-39657673)
chr5 (483-619)||(16155017-16155153)
chr5 (464-619)||(26283329-26283484)
chr5 (465-615)||(1776391-1776541)
chr5 (483-617)||(43068897-43069031)
chr5 (463-616)||(36293635-36293788)
chr5 (493-621)||(16333885-16334013)
chr5 (463-619)||(39434696-39434852)
chr5 (463-614)||(3155647-3155798)
chr5 (465-619)||(19985941-19986095)
chr5 (465-622)||(36291373-36291530)
chr5 (485-589)||(28801309-28801415)
[»] chr3 (17 HSPs)
chr3 (462-622)||(45182980-45183140)
chr3 (462-622)||(33040952-33041112)
chr3 (462-622)||(11018220-11018380)
chr3 (462-620)||(6930904-6931062)
chr3 (467-622)||(27935182-27935337)
chr3 (462-618)||(6503581-6503737)
chr3 (463-619)||(19390146-19390302)
chr3 (462-614)||(19565517-19565669)
chr3 (464-619)||(6269437-6269592)
chr3 (463-618)||(34084134-34084289)
chr3 (464-619)||(22968455-22968610)
chr3 (462-614)||(45335874-45336025)
chr3 (464-619)||(39771791-39771946)
chr3 (462-622)||(35514265-35514421)
chr3 (477-622)||(40081749-40081892)
chr3 (485-589)||(5135291-5135397)
chr3 (463-511)||(22922157-22922205)
[»] chr4 (39 HSPs)
chr4 (466-620)||(3292906-3293060)
chr4 (462-622)||(6690243-6690403)
chr4 (462-622)||(30216750-30216910)
chr4 (465-618)||(43143596-43143749)
chr4 (483-622)||(48989348-48989487)
chr4 (462-622)||(50205085-50205245)
chr4 (464-618)||(42333788-42333942)
chr4 (483-622)||(44156671-44156810)
chr4 (462-612)||(10352902-10353052)
chr4 (464-619)||(20129311-20129466)
chr4 (463-622)||(25930708-25930867)
chr4 (463-622)||(36382354-36382512)
chr4 (485-622)||(29319713-29319850)
chr4 (487-618)||(35545977-35546108)
chr4 (466-618)||(28877262-28877414)
chr4 (464-619)||(26439290-26439445)
chr4 (464-619)||(34407295-34407450)
chr4 (464-619)||(43355905-43356060)
chr4 (9-254)||(47763659-47763898)
chr4 (464-619)||(13012189-13012344)
chr4 (464-619)||(47500774-47500929)
chr4 (487-617)||(26448077-26448206)
chr4 (487-621)||(29995992-29996126)
chr4 (487-618)||(17511245-17511377)
chr4 (464-614)||(30077647-30077797)
chr4 (521-622)||(6235578-6235679)
chr4 (487-622)||(40529039-40529174)
chr4 (498-617)||(1817752-1817871)
chr4 (465-589)||(30109958-30110084)
chr4 (541-618)||(13392893-13392970)
chr4 (541-618)||(13396032-13396109)
chr4 (338-452)||(47763430-47763545)
chr4 (483-589)||(48129986-48130087)
chr4 (488-556)||(6254569-6254637)
chr4 (487-553)||(45194200-45194266)
chr4 (463-548)||(27363361-27363446)
chr4 (462-504)||(7769327-7769369)
chr4 (295-337)||(47763575-47763617)
chr4 (462-500)||(49908782-49908820)
[»] chr2 (22 HSPs)
chr2 (462-622)||(8147350-8147511)
chr2 (462-622)||(45418582-45418742)
chr2 (462-622)||(44084611-44084771)
chr2 (483-622)||(12756845-12756984)
chr2 (469-622)||(771005-771158)
chr2 (463-621)||(42439986-42440144)
chr2 (466-619)||(41251645-41251798)
chr2 (464-619)||(6403815-6403970)
chr2 (463-622)||(35962715-35962874)
chr2 (463-622)||(31581630-31581789)
chr2 (463-622)||(32127149-32127308)
chr2 (485-622)||(8059341-8059478)
chr2 (463-619)||(17445052-17445206)
chr2 (469-622)||(18981622-18981775)
chr2 (488-620)||(2285887-2286019)
chr2 (466-622)||(16405603-16405759)
chr2 (463-600)||(2958131-2958267)
chr2 (483-622)||(26162710-26162846)
chr2 (462-577)||(26237956-26238071)
chr2 (462-589)||(4555250-4555378)
chr2 (482-542)||(34905968-34906028)
chr2 (472-589)||(7072589-7072710)
[»] chr8 (16 HSPs)
chr8 (463-618)||(34136837-34136992)
chr8 (462-619)||(23402107-23402264)
chr8 (462-622)||(16788033-16788193)
chr8 (462-618)||(4404007-4404163)
chr8 (485-617)||(9877242-9877374)
chr8 (463-622)||(15838286-15838444)
chr8 (475-622)||(3648802-3648949)
chr8 (463-622)||(29728394-29728553)
chr8 (462-617)||(36408550-36408705)
chr8 (495-621)||(42230971-42231095)
chr8 (464-619)||(39914516-39914670)
chr8 (462-618)||(2729208-2729364)
chr8 (483-589)||(3435289-3435397)
chr8 (479-556)||(40470567-40470644)
chr8 (462-548)||(10397122-10397208)
chr8 (538-597)||(376459-376519)
[»] scaffold0502 (1 HSPs)
scaffold0502 (463-622)||(5230-5389)
[»] scaffold0041 (1 HSPs)
scaffold0041 (483-622)||(52945-53084)
[»] scaffold0154 (1 HSPs)
scaffold0154 (462-619)||(31479-31636)
[»] scaffold0069 (1 HSPs)
scaffold0069 (483-619)||(17862-17998)
[»] scaffold0002 (1 HSPs)
scaffold0002 (464-619)||(480468-480623)
[»] scaffold2142 (1 HSPs)
scaffold2142 (464-619)||(523-678)


Alignment Details
Target: chr1 (Bit Score: 373; Significance: 0; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 9 - 455
Target Start/End: Complemental strand, 51548086 - 51547639
Alignment:
Q  9 ttttggtcattcatgaatatttcatatctcgtattttaatttgatttaatcaaaggtcattgaagcgtgttcattttgttcatattcatga-tgatgaag 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  51548086 ttttggtcattcatgaatatttcatatctcgtattttaatttgatttaatcaaaggtcattgaagcgtgttcattttgttcatattcatgaatgatgaag 51547987  T
Q  108 aatagaaggattggaagatattgtgctcatgcttcaatgacctggcatggaagaaatgcttttttgctgtcgtgatgactgatgatagtcaatgaatatg 207  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  51547986 aatagaaggattggaagatgttgtgctcatgcttcaatgacctggcatggatgaaatgcttttttgctgtcgtgatgactgatgatagtcaatgcatatg 51547887  T
Q  208 aaccaaattgaattaatcggcaatcaatttcttttgtcttgtttgttcccgctcacggaccatcttctttctgcaacnnnnnnnnnggggttacactaaa 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |         ||||||| |||||     
T  51547886 aaccaaattgaattaatcggcaatcaatttcttttgtcttgtttgttcccgctcacgtaccatcttctttctgcacctttttttttggggttatactaac 51547787  T
Q  308 atttaattgatgaatcatagtaaaatgcttaggaaaacctaactgttggtagtggggttaaagattgtgtgccggaatatgtagatgttctcatttttat 407  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51547786 atttaattgatgaatcatagtaaaatgcttaggaaaacctaattgttggtagtggggttaaagattgtgtgccggaatatgtagatgttctcatttttat 51547687  T
Q  408 atctaaaaaatcttagccattaataagatctgatggtatatttttcat 455  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  51547686 atctaaaaaatcttagccattaataagatttaatggtatatttttcat 51547639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 17445312 - 17445472
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    ||||||||||  || ||||| |||||| |||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||    
T  17445312 cggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc 17445411  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  17445412 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacggg 17445472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 462 - 620
Target Start/End: Original strand, 35907551 - 35907709
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||| ||||| ||||| |||||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||| |||| |     
T  35907551 cggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaagaaaattttgggt 35907650  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacg 620  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  35907651 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacg 35907709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 3828983 - 3829142
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||| ||||||| | |||||||||| |||||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||||||||||||||| ||    
T  3828983 cggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggc 3829082  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  3829083 aatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacggg 3829142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 463 - 619
Target Start/End: Complemental strand, 32982223 - 32982067
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||  ||||| | ||||||| | |||||||||||||||||||  ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    ||||||||||| |||||| ||||||||||| |||||||||| |||||| ||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgac 32982067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 483 - 622
Target Start/End: Complemental strand, 321524 - 321385
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    ||||||||||||||||||||||  ||||||| ||||| |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| | ||    
T  321524 cgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaaattctcatatgc 321425  T
Q  583 aaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||| || |||| ||||||||||    
T  321424 aaataggtctcggaattttatttaacacattattgacggg 321385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 467 - 622
Target Start/End: Original strand, 7433449 - 7433604
Alignment:
Q  467 accccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatct 566  Q
    ||||||||| ||||| || |||||||| |||||||||||||||||||| |||| |||||| | ||||||||| |||||||||||||| |||| |||||||    
T  7433449 accccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatct 7433548  T
Q  567 gaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
     |||||| |||||| ||||||||||| | |||||||| ||||||||||||||||||    
T  7433549 aaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacggg 7433604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 26144256 - 26144411
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| ||| ||||||||||||||| ||||    
T  26144256 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 26144355  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    | |||||||| ||||||| |||||||||| |||||||||| | |||||||||||||    
T  26144356 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 26144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 478 - 622
Target Start/End: Complemental strand, 42311093 - 42310949
Alignment:
Q  478 tcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctca 577  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||||| |  |||||||| ||||||||||||||||||| |||||||||||||| |||    
T  42311093 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 42310994  T
Q  578 cacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||| |||| | |||||||| ||| || |||||||||||    
T  42310993 cacgcaaataagtcttgaaattttatttagtacgctattgacggg 42310949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 464 - 589
Target Start/End: Complemental strand, 41972440 - 41972314
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttg--agc 561  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||  ||||| | |||||||||||||||||||||||||||||  |      
T  41972440 gcgaccccgggcggtcgc-ctggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaaaaagaaaaatttggaaaa 41972342  T
Q  562 aatctgaaaattctcacacgcaaatagg 589  Q
    ||||||||||||||||||||||||||||    
T  41972341 aatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 462 - 589
Target Start/End: Original strand, 33489686 - 33489815
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||| | |||| ||||| | | ||||||||||||| ||||||||| |||   ||||| | |||||||||||||| |||||||||||||||||    
T  33489686 cggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagc 33489785  T
Q  562 --aatctgaaaattctcacacgcaaatagg 589  Q
      ||||||||||||||||||||||||||||    
T  33489786 aaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 569
Target Start/End: Original strand, 23313258 - 23313345
Alignment:
Q  483 cgggctcgatcgataattt-ttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaa 569  Q
    |||||||||| ||| |||| ||||||||||||| ||||  ||||||  ||||||||| ||||||||||||||||||| ||||||||||    
T  23313258 cgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 548
Target Start/End: Complemental strand, 35951492 - 35951427
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaa 548  Q
    |||||||||||||||||||||| |||||||  | ||| ||| || | ||||||||||| |||||||    
T  35951492 cgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 2e-66; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 37002312 - 37002152
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||    
T  37002312 cggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggc 37002213  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  37002212 aatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacggg 37002152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 34389224 - 34389064
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||    
T  34389224 cggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggc 34389125  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  34389124 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacggg 34389064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 472 - 621
Target Start/End: Original strand, 35090177 - 35090326
Alignment:
Q  472 gggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaa 571  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  572 ttctcacacgcaaataggtctcggaattttatatagcacactattgacgg 621  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgg 35090326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 33685563 - 33685723
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||| ||    
T  33685563 cggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggc 33685662  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||| ||||||||| |||||  |||||||| ||||||||||||||||||    
T  33685663 aatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacggg 33685723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 486 - 622
Target Start/End: Complemental strand, 38638380 - 38638244
Alignment:
Q  486 gctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaa 585  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  586 taggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacggg 38638244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 26624744 - 26624905
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgat-cgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgag 560  Q
    |||| ||||||||| |||||  ||||||||| |||||||||||||| |||||||||||  ||||||| |||||||||||||||||||||||||||||| |    
T  26624744 cggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttggg 26624843  T
Q  561 caatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26624844 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 26624905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 462 - 621
Target Start/End: Complemental strand, 8867899 - 8867740
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||  |||||| ||||||| ||| ||||||||||||||||||| ||    
T  8867899 cggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggc 8867800  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgg 621  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  8867799 aatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgg 8867740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 5555487 - 5555646
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||| | |||||| || ||||||||||||||||||| |||    
T  5555487 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggca 5555586  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  5555587 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacggg 5555646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 466 - 622
Target Start/End: Complemental strand, 3114260 - 3114104
Alignment:
Q  466 gaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatc 565  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| ||||||    
T  3114260 gaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 3114161  T
Q  566 tgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||| |||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  3114160 tgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacggg 3114104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 470 - 622
Target Start/End: Complemental strand, 43184628 - 43184476
Alignment:
Q  470 ccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaa 569  Q
    |||||| ||||||||||||||||||||||||||| | ||| ||||  ||| |||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  43184628 ccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaa 43184529  T
Q  570 aattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  43184528 aattctcacacgcaaataggtctctgaattttatttagcacactattgacggg 43184476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 8394125 - 8394284
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||||  ||||||| ||||||||| |||||||| |||||||||| |||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacggg 8394284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 36630816 - 36630975
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||| || ||||  ||||||| ||||||||| ||||||||||||||||||| |||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacggg 36630975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 464 - 619
Target Start/End: Complemental strand, 14777273 - 14777118
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||   ||||||||| ||||||||||||||||||| ||||    
T  14777273 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaa 14777174  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  14777173 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 14777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 487 - 622
Target Start/End: Original strand, 36658205 - 36658340
Alignment:
Q  487 ctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaat 586  Q
    |||||||||||||||||||||||| ||||||||  ||||| ||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  36658205 ctcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacgcaaat 36658304  T
Q  587 aggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||| ||||||||||||||||||    
T  36658305 aggtctcggaattttatttagcacactattgacggg 36658340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 483 - 622
Target Start/End: Complemental strand, 40920150 - 40920011
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||||||||||||||||||||||||||||||   ||| |||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||    
T  40920150 cgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgc 40920051  T
Q  583 aaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  40920050 aaataggtctcggaattttatttagcacactattgacggg 40920011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 7002724 - 7002884
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    ||||||||||| || ||||| |||||||||||||  ||||||  |||||| ||||||| |||||| |||||||||||| |||||||| |||||||||  |    
T  7002724 cggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggac 7002823  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7002824 aatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacggg 7002884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 7048595 - 7048755
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    ||||||||||| || ||||| |||||||||||||  ||||||  |||||| ||||||| |||||| |||||||||||| |||||||| |||||||||  |    
T  7048595 cggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggac 7048694  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7048695 aatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacggg 7048755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 530 - 589
Target Start/End: Complemental strand, 10868575 - 10868514
Alignment:
Q  530 attaacacacttacaaaaagaaaaatttgagc--aatctgaaaattctcacacgcaaatagg 589  Q
    ||||||||| ||||||||||||||||||| ||  ||||||||||||||||| ||||||||||    
T  10868575 attaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 553
Target Start/End: Original strand, 26502810 - 26502899
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaa 553  Q
    ||||||||| ||||||||| |||||||||||||   |||||||| ||||  |||||| |||||| | |||||||||| |||||||| ||||    
T  26502810 ggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaaaaaa 26502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 553
Target Start/End: Complemental strand, 26589904 - 26589815
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaa 553  Q
    ||||||||| ||||||||| |||||||||||||   |||||||| ||||  |||||| |||||| | |||||||||| |||||||| ||||    
T  26589904 ggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaaaaaa 26589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 2e-66; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 28996729 - 28996889
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| || |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| ||    
T  28996729 cggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggc 28996828  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28996829 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacggg 28996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 18339106 - 18339265
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||| |||| |||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacggg 18339265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 13837821 - 13837980
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    |||||||||||||  ||||||||| ||||||||||||||||| ||||||||| |||| ||||||   || |||||| ||||||||||||||||||| |||    
T  13837821 ggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggca 13837920  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  13837921 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 13837980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 463 - 622
Target Start/End: Complemental strand, 34948925 - 34948766
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||| ||| ||||| | |||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| |||    
T  34948925 ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 34948826  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||| ||||||| ||| | |||||||| ||||||||||||||||||    
T  34948825 atctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacggg 34948766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 469 - 614
Target Start/End: Original strand, 29743289 - 29743434
Alignment:
Q  469 cccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctga 568  Q
    ||||||| || || ||||||| |||||||||||||||||||||||||||||  ||||||  ||||||||| ||||| ||||||||||||| |||||||||    
T  29743289 cccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctga 29743388  T
Q  569 aaattctcacacgcaaataggtctcggaattttatatagcacacta 614  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  29743389 aaattcttacacgcaaataggtctcggaattttatttagcacacta 29743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 398618 - 398773
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| ||| ||||||||||||||| ||||    
T  398618 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 398717  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    | |||||||| ||||||| |||||||||| |||||||||| | |||||||||||||    
T  398718 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 483 - 617
Target Start/End: Complemental strand, 33229483 - 33229349
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||| || |||||||||||||||| |||||||||||||||| |||||     
T  33229483 cgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttacacgt 33229384  T
Q  583 aaataggtctcggaattttatatagcacactattg 617  Q
    ||||| ||||||| ||||||| |||||||||||||    
T  33229383 aaataagtctcgggattttatttagcacactattg 33229349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 24697985 - 24697899
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaa 548  Q
    |||||||||||| || |||| ||||||| ||||||||||||| |||||||| |||||| |||||| | |||||||||||||||||||    
T  24697985 cggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 558
Target Start/End: Complemental strand, 31028532 - 31028436
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttg 558  Q
    ||||||||||| || || || ||| ||||||||||||||||||||||||||| |||||  |||||   ||||||||| |||||||||| ||| ||||    
T  31028532 cggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttg 31028436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 499
Target Start/End: Original strand, 13647016 - 13647053
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataat 499  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  13647016 cggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 2e-66; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 37254640 - 37254800
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  37254640 cggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc 37254739  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  37254740 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacggg 37254800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 31680366 - 31680526
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  31680366 cggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 31680465  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  31680466 aatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacggg 31680526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 462 - 621
Target Start/End: Complemental strand, 17332719 - 17332560
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    ||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  17332719 cggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 17332620  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgg 621  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  17332619 aatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgg 17332560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 462 - 619
Target Start/End: Complemental strand, 12279028 - 12278871
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||    
T  12279028 cggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggc 12278929  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12278928 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 12278871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 477 - 622
Target Start/End: Original strand, 33430335 - 33430480
Alignment:
Q  477 gtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctc 576  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  577 acacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacggg 33430480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 462 - 618
Target Start/End: Complemental strand, 31501884 - 31501728
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    ||||||||||||||  | || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  31501884 cggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 31501785  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  31501784 aatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 13817977 - 13818136
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| |||    
T  13817977 ggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 13818076  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  13818077 atctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacggg 13818136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 10033927 - 10034086
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||| |  |||| |||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| |||    
T  10033927 ggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 10034026  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  10034027 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 10034086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 463 - 622
Target Start/End: Complemental strand, 39657673 - 39657514
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||| | | |||| ||||||||||| ||||||||||||||||||||| |||| ||||||   ||||||||| ||||||||||||||||||| |||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 39657574  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  39657573 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 39657514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 483 - 619
Target Start/End: Original strand, 16155017 - 16155153
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||| ||||||||||||||  |||||||||||||| ||||||||    
T  16155017 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacacgc 16155116  T
Q  583 aaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| |||||||||| |||||||||||||||    
T  16155117 aaataggtcttggaattttatttagcacactattgac 16155153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 464 - 619
Target Start/End: Complemental strand, 26283484 - 26283329
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||  ||||||  ||||||||| ||| ||||||||||||||| ||||    
T  26283484 gcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 26283385  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| |||||||||| |||||||||| | |||||||||||||    
T  26283384 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 26283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 465 - 615
Target Start/End: Complemental strand, 1776541 - 1776391
Alignment:
Q  465 cgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaat 564  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||| |  ||||  ||||||| ||||||||| ||||||||||||||||||| |||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  565 ctgaaaattctcacacgcaaataggtctcggaattttatatagcacactat 615  Q
     |||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactat 1776391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 483 - 617
Target Start/End: Original strand, 43068897 - 43069031
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||| |     
T  43068897 cgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatgt 43068996  T
Q  583 aaataggtctcggaattttatatagcacactattg 617  Q
    ||||| ||||||||||||||| |||||||||||||    
T  43068997 aaataagtctcggaattttatttagcacactattg 43069031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 463 - 616
Target Start/End: Complemental strand, 36293788 - 36293635
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    |||||||||| || ||||  ||| |||||||||||||||||| ||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| |||    
T  36293788 ggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 36293689  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactatt 616  Q
    ||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  36293688 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatt 36293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 493 - 621
Target Start/End: Complemental strand, 16334013 - 16333885
Alignment:
Q  493 cgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtct 592  Q
    |||||||||||||||||||||  |||| |||||| | ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  593 cggaattttatatagcacactattgacgg 621  Q
     |||||||||| |||||||||||||||||    
T  16333913 tggaattttatttagcacactattgacgg 16333885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 463 - 619
Target Start/End: Original strand, 39434696 - 39434852
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    |||||||| |||| ||||| ||||||||||||||||||||| |||||||||| |||| |||||| | ||||||||| |||||||| |||||||||| |||    
T  39434696 ggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttgggca 39434795  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    ||||||||||| ||||| | ||||||||||  ||||||||| |||||||||||||||    
T  39434796 atctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgac 39434852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 463 - 614
Target Start/End: Complemental strand, 3155798 - 3155647
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||| ||| ||||  ||||||| ||||||||| ||| |||||||||||||||  ||    
T  3155798 ggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggaca 3155699  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacacta 614  Q
    ||||||||||| |||||||||||||| ||| |||||||||| ||||||||||    
T  3155698 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 465 - 619
Target Start/End: Original strand, 19985941 - 19986095
Alignment:
Q  465 cgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaat 564  Q
    ||||| ||||| ||||  || ||||||||||||||||||||||||||||  |||| |||||||| |||| |||| ||||||||||||||||||| | |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  565 ctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    || |||||| |||||||||||||||||| | |||||||| || ||||||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgac 19986095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 465 - 622
Target Start/End: Original strand, 36291373 - 36291530
Alignment:
Q  465 cgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaat 564  Q
    |||| |||||| ||||  |||| |||||| ||||||||||||||||||| | |||  ||||||  ||||||||| ||||||||||||||||||| |||||    
T  36291373 cgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaat 36291472  T
Q  565 ctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    || |||||| | |||| |||||||||||| ||||||||| || |||||||||||||||    
T  36291473 ctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacggg 36291530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 485 - 589
Target Start/End: Original strand, 28801309 - 28801415
Alignment:
Q  485 ggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaattt--gagcaatctgaaaattctcacacgc 582  Q
    ||||||||||||||||||||||||||||| ||||  |||||| | ||||||||||||||||||||||||||||  ||  ||| |||||||||||||||||    
T  28801309 ggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaattctcacacgc 28801408  T
Q  583 aaatagg 589  Q
    |||||||    
T  28801409 aaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 2e-66; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 45182980 - 45183140
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  45182980 cggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 45183079  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  45183080 aatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacggg 45183140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 33040952 - 33041112
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||||||||| |    
T  33040952 cggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaac 33041051  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33041052 aatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggg 33041112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 11018380 - 11018220
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    ||||||| |||||| ||||| | |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| ||    
T  11018380 cggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 11018281  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  11018280 aatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacggg 11018220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 462 - 620
Target Start/End: Complemental strand, 6931062 - 6930904
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||| | ||||| ||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||| ||||||||||||||||||  ||    
T  6931062 cggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggc 6930963  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacg 620  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6930962 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 6930904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 467 - 622
Target Start/End: Original strand, 27935182 - 27935337
Alignment:
Q  467 accccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatct 566  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||   ||||||||||||||||||||||||||||| |||||||    
T  27935182 accctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggcaatct 27935281  T
Q  567 gaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||    
T  27935282 gaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacggg 27935337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 462 - 618
Target Start/End: Complemental strand, 6503737 - 6503581
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||| ||||||| |||| |||||| |||||| ||||||||||||||||||||||| |||    
T  6503737 cggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaaaaagaaaaatttaagc 6503638  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||| |||||    
T  6503637 aatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattga 6503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 463 - 619
Target Start/End: Original strand, 19390146 - 19390302
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||||||||||| ||||  ||||||| ||||||||| ||||||||||||||||||| |||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    ||||||||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 19390302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 462 - 614
Target Start/End: Complemental strand, 19565669 - 19565517
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||| ||||||| ||||| |||| || |||||||||||||||||||||||||||||  |||| || ||||||||| |||||||||||||||||||  |    
T  19565669 cggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggac 19565570  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacacta 614  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  19565569 aatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 464 - 619
Target Start/End: Complemental strand, 6269592 - 6269437
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||| ||||||| ||||  ||| |||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| ||||    
T  6269592 gcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 6269493  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  6269492 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 6269437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 463 - 618
Target Start/End: Complemental strand, 34084289 - 34084134
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||  ||||||| ||||||||| ||||||||||||||||||| |||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    || |||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattga 34084134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 464 - 619
Target Start/End: Complemental strand, 22968610 - 22968455
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||||||  ||| |||||| | ||||||||| ||||||||||||||||||| ||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 22968511  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    ||| |||||| ||||||| |||||||||| | |||||||| |||||||||||||||    
T  22968510 tctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgac 22968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 462 - 614
Target Start/End: Original strand, 45335874 - 45336025
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||| ||||| ||||| ||| ||| ||||||||||||| |||||||||||||||  |||||||| |||||||| |||||||||||||||| || ||    
T  45335874 cggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaaaaagaaaaatctgggc 45335972  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacacta 614  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  45335973 aatctgaaaattcttacacgcaaataggtcttggaattttatttagcacacta 45336025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 39771791 - 39771946
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||| ||| ||||||||||||||| ||||    
T  39771791 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 39771890  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| |||||||||| | |||||||| |  ||||||||||||    
T  39771891 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 39771946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 35514265 - 35514421
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||| | ||||  |||||||||||||||||||| ||| | |||| ||||| |||||||| ||||||||||    |||||||||||||||  |    
T  35514265 cggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacac----aaaaagaaaaatttggac 35514360  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||| ||||||||||||| ||||||||||||| |||||||||| | ||||||||||||||||    
T  35514361 aatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacggg 35514421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 477 - 622
Target Start/End: Complemental strand, 40081892 - 40081749
Alignment:
Q  477 gtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctc 576  Q
    ||||| |||||||||||||||||||||| ||||||||| |||| ||||||   ||||||||| ||||||||||||||||||| ||||| |||||||| ||    
T  40081892 gtcgcccgggctcgatcgataatttttgaacattagactcaac-caaaagctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtc 40081794  T
Q  577 acacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||| ||| || ||||| | ||||||||||||||||||    
T  40081793 acacgcaaatagatcttgg-attttttttagcacactattgacggg 40081749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 589
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  485 ggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc--aatctgaaaattctcacacgc 582  Q
    |||||||||||| ||||||| ||||||||||||||  |||||   |||||||||||||||||||||||||||||  |  |||| |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  583 aaatagg 589  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 511
Target Start/End: Original strand, 22922157 - 22922205
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacatta 511  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  22922157 ggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacatta 22922205  T

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Target: chr4 (Bit Score: 127; Significance: 3e-65; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 466 - 620
Target Start/End: Complemental strand, 3293060 - 3292906
Alignment:
Q  466 gaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatc 565  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||    
T  3293060 gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 3292961  T
Q  566 tgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacg 620  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3292960 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 3292906  T

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Target: chr4; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 6690403 - 6690243
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  6690403 cggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 6690304  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  6690303 aaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacggg 6690243  T

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Target: chr4; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 30216910 - 30216750
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||    
T  30216910 cggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggc 30216811  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  30216810 aatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacggg 30216750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 465 - 618
Target Start/End: Complemental strand, 43143749 - 43143596
Alignment:
Q  465 cgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaat 564  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| |||||    
T  43143749 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 43143650  T
Q  565 ctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  43143649 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 43143596  T

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Target: chr4; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 483 - 622
Target Start/End: Original strand, 48989348 - 48989487
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  48989348 cgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcatacgc 48989447  T
Q  583 aaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  48989448 aaataggtctcggaattttatttagcacactattgacggg 48989487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 50205245 - 50205085
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||| ||||||| ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||  |    
T  50205245 cggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggac 50205146  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  50205145 aatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacggg 50205085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 464 - 618
Target Start/End: Complemental strand, 42333942 - 42333788
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||| ||||||| ||||  ||||||| |||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  42333942 gcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 42333843  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  42333842 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 483 - 622
Target Start/End: Original strand, 44156671 - 44156810
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||  |||||||||||||||| |||||    
T  44156671 cgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctcacgc 44156770  T
Q  583 aaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  44156771 aaataggtctcggaattttatttagcacactattgacggg 44156810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 462 - 612
Target Start/End: Complemental strand, 10353052 - 10352902
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||| |||||||||| ||    
T  10353052 cggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggc 10352953  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacac 612  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  10352952 aatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 20129311 - 20129466
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| ||||    
T  20129311 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 20129410  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| ||||||||||  ||||||||| | |||||||||||||    
T  20129411 tctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgac 20129466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 25930708 - 25930867
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    |||||||| |||| ||||| ||||||||||| ||||||||||||||||| || |||| |||||| | ||||||||| ||||||||||||||||||| |||    
T  25930708 ggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 25930807  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    || |||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  25930808 atttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 25930867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 463 - 622
Target Start/End: Complemental strand, 36382512 - 36382354
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||||| || ||||  ||||||| ||||||||| |||||||| ||||||||||  ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 36382354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 485 - 622
Target Start/End: Complemental strand, 29319850 - 29319713
Alignment:
Q  485 ggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaa 584  Q
    |||||||||||||||||||||||||||||| |||| |||||  | ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||    
T  29319850 ggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatctgaaaattgtcacacacaa 29319751  T
Q  585 ataggtctcggaattttatatagcacactattgacggg 622  Q
    ||| |||| |||||||||| ||||||||||||||||||    
T  29319750 ataagtcttggaattttatttagcacactattgacggg 29319713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 487 - 618
Target Start/End: Original strand, 35545977 - 35546108
Alignment:
Q  487 ctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaat 586  Q
    ||||||||| ||||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  587 aggtctcggaattttatatagcacactattga 618  Q
     |||||| ||||||||| ||||||||||||||    
T  35546077 gggtctctgaattttatttagcacactattga 35546108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 466 - 618
Target Start/End: Complemental strand, 28877414 - 28877262
Alignment:
Q  466 gaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatc 565  Q
    ||||||| || |||||| ||||| ||||||||||||||||||||||||  ||||  |||||  ||||||||| |||| ||||||||||||||| | ||||    
T  28877414 gaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatc 28877315  T
Q  566 tgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    | |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28877314 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 28877262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 464 - 619
Target Start/End: Complemental strand, 26439445 - 26439290
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||| ||| ||||||||||||||| ||||    
T  26439445 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 26439346  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| |||||||||| | |||||||| |  ||||||||||||    
T  26439345 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 26439290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 464 - 619
Target Start/End: Complemental strand, 34407450 - 34407295
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||| ||| ||||||||||||||| ||||    
T  34407450 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 34407351  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| |||||||||| | |||||||| |  ||||||||||||    
T  34407350 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 34407295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 43355905 - 43356060
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||| ||| ||||||||||||||| ||||    
T  43355905 gcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 43356004  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| |||||||||| | |||||||| |  ||||||||||||    
T  43356005 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgac 43356060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 47763898 - 47763659
Alignment:
Q  9 ttttggtcattcatgaatatttcatatctcgtattttaatttgatttaatcaaaggtcattgaagcgtgttcattttgttcatattcatg-atgatgaag 107  Q
    ||||| |||||||||||||||||||||||| ||||| |||| || |||||||||||||||||||    | ||||||||||||| |||||| ||||| | |    
T  47763898 ttttgatcattcatgaatatttcatatctcatatttcaattcgacttaatcaaaggtcattgaaatacgctcattttgttcatgttcatgaatgattagg 47763799  T
Q  108 aatagaaggattggaagatattgtgctcatgcttcaatgacctggcatggaagaaatgcttttttgctgtcgtgatgactgatgatagtcaatgaatatg 207  Q
    ||||||||||||||||||  |||| ||||| |||||||||||||||||||| | ||||||| ||||||| ||        ||||||||| | ||||||||    
T  47763798 aatagaaggattggaagacgttgtactcatacttcaatgacctggcatggatggaatgcttctttgctgccg-------cgatgatagtgagtgaatatg 47763706  T
Q  208 aaccaaattgaattaatcggcaatcaatttcttttgtcttgtttgtt 254  Q
    ||||||||  |||| |   ||||||||| ||||||||||||| ||||    
T  47763705 aaccaaatcaaattgactagcaatcaatgtcttttgtcttgtctgtt 47763659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 13012189 - 13012344
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||  |||||   ||||||||| ||| ||||||||||||||| ||||    
T  13012189 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 13012288  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    | |||||||| ||||||| |||||||||| |||||||||| | |||||||||||||    
T  13012289 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 13012344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 47500774 - 47500929
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| |||  |||||||||||||| ||||    
T  47500774 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaagaaaaatttgggcaa 47500873  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    | |||||||| ||||||| |||||||||| |||||||||| | |||||||||||||    
T  47500874 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 47500929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 487 - 617
Target Start/End: Original strand, 26448077 - 26448206
Alignment:
Q  487 ctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaat 586  Q
    ||||||||||||||||||||||||| | | ||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| || |||||    
T  26448077 ctcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggcaatctgaaaattctcatacacaaat 26448175  T
Q  587 aggtctcggaattttatatagcacactattg 617  Q
    |||| |||||||||||| |||||||||||||    
T  26448176 aggtttcggaattttatttagcacactattg 26448206  T

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Target: chr4; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 487 - 621
Target Start/End: Complemental strand, 29996126 - 29995992
Alignment:
Q  487 ctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaat 586  Q
    |||||||||||||||||| ||||||||| ||||  ||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||  |||||||||    
T  29996126 ctcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctgaaaattcttgcacgcaaat 29996027  T
Q  587 aggtctcggaattttatatagcacactattgacgg 621  Q
    || ||||||||||||||  ||||||||||||||||    
T  29996026 agttctcggaattttattaagcacactattgacgg 29995992  T

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Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 487 - 618
Target Start/End: Complemental strand, 17511377 - 17511245
Alignment:
Q  487 ctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaat 586  Q
    |||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| ||||| |||||||| | ||||||||||    
T  17511377 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgttacacgcaaat 17511278  T
Q  587 aggtctcgg-aattttatatagcacactattga 618  Q
    |||||| || |||||||| ||||||| ||||||    
T  17511277 aggtcttggaaattttatttagcacattattga 17511245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 464 - 614
Target Start/End: Complemental strand, 30077797 - 30077647
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||| ||||| ||||| | ||||| |||||||| ||||||||||||||||||||  ||||||  ||||||||| |||||||||||||||||||  |||    
T  30077797 gcgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggacaa 30077698  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacacta 614  Q
    |||||||||| | |||| ||||||||||| | |||||||| ||||||||||    
T  30077697 tctgaaaatttttacacacaaataggtcttgaaattttatttagcacacta 30077647  T

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Target: chr4; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 521 - 622
Target Start/End: Original strand, 6235578 - 6235679
Alignment:
Q  521 caaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacg 620  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  6235578 caaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacg 6235677  T
Q  621 gg 622  Q
    ||    
T  6235678 gg 6235679  T

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Target: chr4; HSP #27
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 487 - 622
Target Start/End: Original strand, 40529039 - 40529174
Alignment:
Q  487 ctcgatcgataatttttgcacattagacccaac-tcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaa 585  Q
    ||||||||||||||||||||||||| || |||| | |||| ||| |||||||| |||||||||||||||||||  |||| |||||||| ||||| |||||    
T  40529039 ctcgatcgataatttttgcacattaaactcaacctaaaaactca-ttaacacatttacaaaaagaaaaatttggacaatttgaaaattgtcacatgcaaa 40529137  T
Q  586 taggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  40529138 taggtcttggaattttatttagcacactattgacggg 40529174  T

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Target: chr4; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 498 - 617
Target Start/End: Original strand, 1817752 - 1817871
Alignment:
Q  498 atttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaa 597  Q
    |||||||||||||||| ||||  |||||||| ||||| ||| ||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  598 ttttatatagcacactattg 617  Q
    |||||| || ||||||||||    
T  1817852 ttttatttaacacactattg 1817871  T

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Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 465 - 589
Target Start/End: Original strand, 30109958 - 30110084
Alignment:
Q  465 cgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc--a 562  Q
    ||||||||| | ||||| ||| ||||||||||||||||||||||||||||||||  | |||| | |||||||||||||||||||||||||||||  |  |    
T  30109958 cgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttggacaaa 30110057  T
Q  563 atctgaaaattctcacacgcaaatagg 589  Q
    || |||||| |||||||||||||||||    
T  30110058 atatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 541 - 618
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  541 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

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Target: chr4; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 541 - 618
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  541 tacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 338 - 452
Target Start/End: Complemental strand, 47763545 - 47763430
Alignment:
Q  338 aggaaaacctaactgttggtagtgggg-ttaaagattgtgtgccggaatatgtagatgttctcatttttatatctaaaaaatcttagccattaataagat 436  Q
    |||||||||||||| |||  ||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||| | |||||| ||| ||||| |||||||    
T  47763545 aggaaaacctaactattgacagtgggggttaaagattgtgtgcaggaatgtgtaggtgttctcatttttatatatgaaaaatattaaccattgataagat 47763446  T
Q  437 ctgatggtatattttt 452  Q
    |||||| |||||||||    
T  47763445 ctgatgatatattttt 47763430  T

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Target: chr4; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 483 - 589
Target Start/End: Original strand, 48129986 - 48130087
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||||||||||||||||||||||| |||||||||||| ||||||   ||||||||||||||||||||||||||||| |     |||||| ||||||||||    
T  48129986 cgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg-----tgaaaactctcacacgc 48130080  T
Q  583 aaatagg 589  Q
    |||||||    
T  48130081 aaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 488 - 556
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  488 tcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatt 556  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 553
Target Start/End: Original strand, 45194200 - 45194266
Alignment:
Q  487 ctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaa 553  Q
    ||||||| ||||||||||||||||| || |||| |||||||| ||||||||||||||||||| ||||    
T  45194200 ctcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaa 45194266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 27363361 - 27363446
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaa 548  Q
    ||||||| ||||| ||||| |||||||||||||   |||||||| ||||| |||||| |||||| | |||||||||||||||||||    
T  27363361 ggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaaaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 504
Target Start/End: Original strand, 7769327 - 7769369
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttg 504  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||    
T  7769327 cggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 47763617 - 47763575
Alignment:
Q  295 gggttacactaaaatttaattgatgaatcatagtaaaatgctt 337  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  47763617 gggttacactaacacttaatcgatgaatcatagtaaaatgctt 47763575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 500
Target Start/End: Complemental strand, 49908820 - 49908782
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatt 500  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  49908820 cggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 1e-64; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 8147350 - 8147511
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8147350 cggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggc 8147449  T
Q  562 aatctg-aaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||| ||||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  8147450 aatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacggg 8147511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 462 - 622
Target Start/End: Original strand, 45418582 - 45418742
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  45418582 cggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 45418681  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  45418682 aatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacggg 45418742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 44084771 - 44084611
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  |||||||  ||||||||||||||||||||||||||||| ||    
T  44084771 cggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggc 44084672  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  44084671 aatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacggg 44084611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 483 - 622
Target Start/End: Complemental strand, 12756984 - 12756845
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12756984 cgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 12756885  T
Q  583 aaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  12756884 aaataagtctcggaattttatttagcacactattgacggg 12756845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 469 - 622
Target Start/End: Original strand, 771005 - 771158
Alignment:
Q  469 cccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctga 568  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||||||||  ||||| | ||||||||||||||||||||||||||||| |||||||||    
T  771005 cccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctga 771104  T
Q  569 aaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  771105 aaattctcacacgcaaataggtctcggaactttatttagcacattattgacggg 771158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 463 - 621
Target Start/End: Original strand, 42439986 - 42440144
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||  ||| |||||| | ||||||||| ||||||||||||||||||| |||    
T  42439986 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 42440085  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacgg 621  Q
    ||||||||||| |||||||||||||||||| | |||||||| |||||||||||||||||    
T  42440086 atctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacgg 42440144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 466 - 619
Target Start/End: Complemental strand, 41251798 - 41251645
Alignment:
Q  466 gaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatc 565  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| ||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  566 tgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 41251645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 464 - 619
Target Start/End: Complemental strand, 6403970 - 6403815
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  ||||||  ||||||||| ||| ||||||||||||||| ||||    
T  6403970 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 6403871  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| ||||||| |||||||||| |||||||||| | |||||||||||||    
T  6403870 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 6403815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 35962715 - 35962874
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||| ||| ||||  |||||||||||||||||||||||||||||||| |||| ||||||   ||||||||| |||||||||||||| |||| |||    
T  35962715 ggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggca 35962814  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  35962815 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacggg 35962874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 463 - 622
Target Start/End: Complemental strand, 31581789 - 31581630
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||| ||||| ||||| | ||||||| ||||| |||||||| ||||||| || | |||||| | ||||||||| ||||||||||||||||||| |||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacggg 31581630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 463 - 622
Target Start/End: Complemental strand, 32127308 - 32127149
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||||| || | || ||||||   ||||||||| ||||||||||||||||||  |||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggca 32127209  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  32127208 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacggg 32127149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 485 - 622
Target Start/End: Complemental strand, 8059478 - 8059341
Alignment:
Q  485 ggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaa 584  Q
    ||||| |||||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||||||||  |||| ||||||||||||||| |||    
T  8059478 ggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaatttgaaaattctcacacacaa 8059379  T
Q  585 ataggtctcggaattttatatagcacactattgacggg 622  Q
    || |||||||||||||||| |||||||| |||||||||    
T  8059378 atcggtctcggaattttatttagcacacaattgacggg 8059341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 463 - 619
Target Start/End: Complemental strand, 17445206 - 17445052
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||| ||||| ||||| || ||||||||||||||||||||||  ||||| |||| |||||| | ||||||||| ||||||||||||||||||| |||    
T  17445206 ggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17445109  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    ||||||||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  17445108 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 17445052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 469 - 622
Target Start/End: Original strand, 18981622 - 18981775
Alignment:
Q  469 cccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctga 568  Q
    ||||||| ||||  |||||||||| ||||||||||||||||||||| |||| |||||||| ||||| ||| ||||||||||||||||||| ||||| | |    
T  18981622 cccgggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaa 18981721  T
Q  569 aaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  18981722 aaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacggg 18981775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 488 - 620
Target Start/End: Original strand, 2285887 - 2286019
Alignment:
Q  488 tcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaata 587  Q
    |||||||||||||||||||||||| | |||||  ||||||| ||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  588 ggtctcggaattttatatagcacactattgacg 620  Q
    ||| | |||||||||| ||||||||||||||||    
T  2285987 ggttttggaattttatttagcacactattgacg 2286019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 466 - 622
Target Start/End: Original strand, 16405603 - 16405759
Alignment:
Q  466 gaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatc 565  Q
    ||||| |||| ||||| ||||||| ||||||||||||||||| |||||| |||| ||||||   ||||||||| ||| |||||||||||||||  |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  566 tgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacggg 16405759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 463 - 600
Target Start/End: Complemental strand, 2958267 - 2958131
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||  |||||||||||||||||||| ||||||||||| |||| |||||| | ||||||||| ||||||| ||||||||||| | |    
T  2958267 ggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggta 2958169  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattt 600  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  2958168 atctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 483 - 622
Target Start/End: Complemental strand, 26162846 - 26162710
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||||||  |||||||||||| ||||||| |  |||| |||||  | ||||||||||||||||||||||||||||| ||||||| |||||||||| || |    
T  26162846 cgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacac 26162747  T
Q  583 aaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||   |||| ||||||| ||||||||||    
T  26162746 aaataggtctcgga---ttatttagcacattattgacggg 26162710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 462 - 577
Target Start/End: Original strand, 26237956 - 26238071
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||| ||||||  |||  |||||||| ||||||||||||||||||||||||||||| ||    
T  26237956 cggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggc 26238054  T
Q  562 -aatctgaaaattctca 577  Q
     |||||||||| |||||    
T  26238055 aaatctgaaaactctca 26238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 462 - 589
Target Start/End: Complemental strand, 4555378 - 4555250
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||| | ||||| |||||| || ||||||||||||||||||||||| | ||||||| ||||||    ||||||||||||||||||||||| |||| ||    
T  4555378 cggcgatctcgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggc 4555280  T
Q  562 --aatctgaaaattctcacacgcaaatagg 589  Q
      |||||||||||||||||||| |||||||    
T  4555279 aaaatctgaaaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 542
Target Start/End: Original strand, 34905968 - 34906028
Alignment:
Q  482 tcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacactta 542  Q
    ||||||||||||||||||||||||||||||  || ||| |||||| | |||||||||||||    
T  34905968 tcgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 589
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  472 gggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaatta--acacacttacaaaaagaaaaatttgagcaa--tctg 567  Q
    |||| ||||| |||||||||||||||||||||  |||||| || |||| |||||| | ||||  ||||||||| ||||||||||  |||  |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  568 aaaattctcacacgcaaatagg 589  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 4e-61; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 463 - 618
Target Start/End: Complemental strand, 34136992 - 34136837
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    |||||||||| || ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||    
T  34136992 ggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 34136893  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||    
T  34136892 atctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattga 34136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 462 - 619
Target Start/End: Original strand, 23402107 - 23402264
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||| ||    
T  23402107 cggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 23402206  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    ||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  23402207 aatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgac 23402264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 462 - 622
Target Start/End: Complemental strand, 16788193 - 16788033
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| ||    
T  16788193 cggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc 16788094  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  16788093 aatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacggg 16788033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 462 - 618
Target Start/End: Original strand, 4404007 - 4404163
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||| ||| ||||| |||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||| ||    
T  4404007 cggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggc 4404106  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  4404107 aatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 4404163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 485 - 617
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  485 ggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaa 584  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  585 ataggtctcggaattttatatagcacactattg 617  Q
    |||||||||| |||||||| |||||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 15838286 - 15838444
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||| | |||||||||| |||||||||||||||||| || ||||  ||||||| ||||||||| |||||||| |||||||||| |||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacggg 15838444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 475 - 622
Target Start/End: Complemental strand, 3648949 - 3648802
Alignment:
Q  475 cagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattc 574  Q
    ||||||| ||||||||||||||||||||| |||||||||| |||| |||||| | ||||||||| |||||||||||||| |||| ||||||||||||||     
T  3648949 cagtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattg 3648850  T
Q  575 tcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    |||||||||| ||||| | |||||||||| ||||||||||||||||||    
T  3648849 tcacacgcaagtaggttttggaattttatttagcacactattgacggg 3648802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 463 - 622
Target Start/End: Complemental strand, 29728553 - 29728394
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||| | ||||| || ||||||||||||| ||||||||||||||| |||| ||||||   ||||||||| ||||||||||||||||||| |||    
T  29728553 ggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 29728454  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||| | ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  29728453 atctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacggg 29728394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 462 - 617
Target Start/End: Original strand, 36408550 - 36408705
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||||| |||  ||    
T  36408550 cggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggc 36408649  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattg 617  Q
    ||| |||||||||| |||||| |||||||||| ||||||||| || ||||||||||    
T  36408650 aatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattg 36408705  T

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Target: chr8; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 495 - 621
Target Start/End: Original strand, 42230971 - 42231095
Alignment:
Q  495 ataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataggtctcg 594  Q
    ||||||||||||||||| | |||||||||||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  595 gaattttatatagcacactattgacgg 621  Q
    ||||||||| |||||||||||||||||    
T  42231069 gaattttatttagcacactattgacgg 42231095  T

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Target: chr8; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 39914516 - 39914670
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| ||| ||||| ||||||||| ||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaa 39914614  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    | |||||||| ||||| | |||||||||| |||||||||| | |||||||||||||    
T  39914615 tttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgac 39914670  T

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Target: chr8; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 462 - 618
Target Start/End: Complemental strand, 2729364 - 2729208
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||||||| | ||| ||||||||||||||||||||| ||||||| | ||||  |||||| | ||||||||||||| |||||||||  |||  ||    
T  2729364 cggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggc 2729265  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattga 618  Q
    ||| |||||| ||||| |||||||||||||||  |||||||| ||||||||||||||    
T  2729264 aatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattga 2729208  T

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Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 483 - 589
Target Start/End: Original strand, 3435289 - 3435397
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc--aatctgaaaattctcacac 580  Q
    |||||| |||||||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||||| ||  |||||||||||||||| ||    
T  3435289 cgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctcaaac 3435388  T
Q  581 gcaaatagg 589  Q
    |||||||||    
T  3435389 gcaaatagg 3435397  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 479 - 556
Target Start/End: Complemental strand, 40470644 - 40470567
Alignment:
Q  479 cgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatt 556  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||    
T  40470644 cgctcgagctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 10397208 - 10397122
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaa 548  Q
    ||||||| ||||||| |||| ||||||| ||||||||||| | ||||||||   |||| |||||| | ||||||||| ||| |||||    
T  10397208 cggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

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Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 597
Target Start/End: Original strand, 376459 - 376519
Alignment:
Q  538 acttacaaaaagaaaaatt-tgagcaatctgaaaattctcacacgcaaataggtctcggaa 597  Q
    ||||| ||||| ||||||| || | ||| |||||||||||||||||||| |||||||||||    
T  376459 acttaaaaaaaaaaaaattgtgcgaaatatgaaaattctcacacgcaaagaggtctcggaa 376519  T

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Target: scaffold0502 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 463 - 622
Target Start/End: Original strand, 5230 - 5389
Alignment:
Q  463 ggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagca 562  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||| |||| |||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  563 atctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacggg 5389  T

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Target: scaffold0041 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 483 - 622
Target Start/End: Original strand, 52945 - 53084
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||||||||||||||||||||||||||||||   ||| |||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||    
T  52945 cgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgc 53044  T
Q  583 aaataggtctcggaattttatatagcacactattgacggg 622  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  53045 aaataggtctcggaattttatttagcacactattgacggg 53084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 98; Significance: 6e-48; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 462 - 619
Target Start/End: Original strand, 31479 - 31636
Alignment:
Q  462 cggcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagc 561  Q
    |||||||||| | | ||||| |||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||||||||||||||||||||  |    
T  31479 cggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggac 31578  T
Q  562 aatctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    ||||||||||||||||| ||||||||||||| | |||||||| | |||||||||||||    
T  31579 aatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgac 31636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 483 - 619
Target Start/End: Original strand, 17862 - 17998
Alignment:
Q  483 cgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgc 582  Q
    |||||||||||||||||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||| |||||||||||||| ||||| |     
T  17862 cgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacatgt 17961  T
Q  583 aaataggtctcggaattttatatagcacactattgac 619  Q
    |||||||||| | |||||||| |||||||||||||||    
T  17962 aaataggtcttgaaattttatttagcacactattgac 17998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 464 - 619
Target Start/End: Complemental strand, 480623 - 480468
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| ||| ||||||||||||||| ||||    
T  480623 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 480524  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    | |||||||| ||||||| |||||||||| |||||||||| | |||||||||||||    
T  480523 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 464 - 619
Target Start/End: Original strand, 523 - 678
Alignment:
Q  464 gcgaccccgggcagtcgctcgggctcgatcgataatttttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgagcaa 563  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||   ||||||||| ||| ||||||||||||||| ||||    
T  523 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 622  T
Q  564 tctgaaaattctcacacgcaaataggtctcggaattttatatagcacactattgac 619  Q
    | |||||||| ||||||| |||||||||| |||||||||| | |||||||||||||    
T  623 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgac 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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