View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1375_high_10 (Length: 322)
Name: NF1375_high_10
Description: NF1375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1375_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 3 - 320
Target Start/End: Complemental strand, 47637408 - 47637091
Alignment:
| Q |
3 |
atttgttgtatgttttttagttcaacttgaaacgaaacaaccacaacacaaaccttggagatgaggaaaagtgggaaagagcaaaaacaaaacaagatag |
102 |
Q |
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| T |
47637408 |
atttgttgtatgttttttagttcaacttgaaacgaaacaaccacaacacaaaccttggagatgaggaaaagtgggaaagagcaaaaacaaaacaagatag |
47637309 |
T |
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| Q |
103 |
tgagaataataacaacaccaataagagtgttgggaatagcaaaagacatgtacgtaagaagcataacaaagtgcggtaacaacatgaattatagcaatcc |
202 |
Q |
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| T |
47637308 |
tgagaataataacaacaccaataagagtgttgggaatagcaaaagacatgtacgtaagaagcataacaaagtgcggtaacaacatgaattatagcaatcc |
47637209 |
T |
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| Q |
203 |
tactggaagattcgagaatttaccgcgaagttacagcgcggtaacttctcgatcaggtggtggcggtgataacgaagattttgctgagttaatgagagca |
302 |
Q |
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| T |
47637208 |
tactggaagattcgagaatttaccgcgaagttacagcgcggtaacttctcgatcaggtggtggtggtgataacgaagattttgctgagttaatgagagca |
47637109 |
T |
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| Q |
303 |
gcaacagctagggctttg |
320 |
Q |
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| T |
47637108 |
gcttcagctaggactttg |
47637091 |
T |
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