View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1375_low_14 (Length: 391)

Name: NF1375_low_14
Description: NF1375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1375_low_14
NF1375_low_14
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-362)||(43098-43441)
[»] chr8 (38 HSPs)
chr8 (19-126)||(13160671-13160779)
chr8 (19-94)||(2626488-2626563)
chr8 (25-126)||(45071240-45071342)
chr8 (19-126)||(12670307-12670414)
chr8 (19-95)||(17823545-17823621)
chr8 (19-105)||(28407385-28407471)
chr8 (19-117)||(39461062-39461162)
chr8 (25-126)||(36720771-36720874)
chr8 (30-104)||(18164840-18164914)
chr8 (19-93)||(20869588-20869662)
chr8 (19-93)||(30454187-30454261)
chr8 (29-94)||(30962864-30962929)
chr8 (19-126)||(35261648-35261757)
chr8 (22-94)||(26954104-26954176)
chr8 (20-126)||(28817683-28817791)
chr8 (26-94)||(20284164-20284232)
chr8 (26-94)||(21070793-21070861)
chr8 (19-126)||(29521742-29521851)
chr8 (19-95)||(7136619-7136695)
chr8 (26-94)||(14018060-14018128)
chr8 (19-94)||(6760791-6760866)
chr8 (20-91)||(24245421-24245491)
chr8 (27-94)||(24365151-24365218)
chr8 (25-94)||(25250497-25250566)
chr8 (19-126)||(44530118-44530227)
chr8 (32-127)||(31457155-31457251)
chr8 (26-94)||(42083790-42083858)
chr8 (26-105)||(44781585-44781665)
chr8 (26-122)||(44742580-44742678)
chr8 (25-94)||(8897855-8897924)
chr8 (17-126)||(12625856-12625968)
chr8 (26-94)||(22598133-22598201)
chr8 (36-126)||(23000276-23000365)
chr8 (29-93)||(35105902-35105966)
chr8 (20-94)||(11748269-11748343)
chr8 (26-66)||(11001069-11001109)
chr8 (26-94)||(26457691-26457759)
chr8 (18-70)||(40607839-40607891)
[»] chr6 (23 HSPs)
chr6 (18-121)||(9161091-9161195)
chr6 (19-126)||(1346933-1347040)
chr6 (19-126)||(1354814-1354921)
chr6 (18-94)||(6024201-6024277)
chr6 (19-117)||(12221983-12222083)
chr6 (19-94)||(3815168-3815243)
chr6 (33-117)||(29355923-29356009)
chr6 (26-94)||(14975171-14975239)
chr6 (19-94)||(8409212-8409287)
chr6 (19-94)||(20400636-20400711)
chr6 (19-94)||(24734602-24734677)
chr6 (27-93)||(2166504-2166570)
chr6 (27-93)||(2178137-2178203)
chr6 (26-126)||(13905036-13905138)
chr6 (20-82)||(8417442-8417504)
chr6 (28-94)||(12063445-12063511)
chr6 (20-94)||(14553482-14553555)
chr6 (26-117)||(12889402-12889495)
chr6 (25-94)||(15866128-15866197)
chr6 (28-93)||(28007604-28007671)
chr6 (25-94)||(24097556-24097625)
chr6 (55-126)||(33138838-33138911)
chr6 (28-94)||(32068074-32068137)
[»] chr2 (44 HSPs)
chr2 (19-126)||(12023976-12024084)
chr2 (19-126)||(25249795-25249903)
chr2 (19-126)||(8455373-8455482)
chr2 (18-94)||(17896227-17896303)
chr2 (19-126)||(11514405-11514514)
chr2 (20-122)||(24200686-24200790)
chr2 (19-94)||(14530287-14530362)
chr2 (25-117)||(7214509-7214603)
chr2 (27-93)||(45235910-45235976)
chr2 (19-122)||(10543667-10543772)
chr2 (20-93)||(23397736-23397809)
chr2 (26-94)||(21377164-21377232)
chr2 (19-126)||(21779318-21779425)
chr2 (25-126)||(17623539-17623642)
chr2 (25-126)||(17667977-17668080)
chr2 (25-126)||(22371032-22371132)
chr2 (19-94)||(25079809-25079884)
chr2 (28-94)||(5841006-5841072)
chr2 (26-126)||(9671156-9671257)
chr2 (30-104)||(17380317-17380391)
chr2 (20-105)||(17705465-17705551)
chr2 (25-94)||(19977805-19977874)
chr2 (27-87)||(99361-99421)
chr2 (19-126)||(27573590-27573698)
chr2 (26-94)||(29419980-29420048)
chr2 (28-103)||(44604832-44604907)
chr2 (28-94)||(5450263-5450329)
chr2 (51-105)||(14444730-14444784)
chr2 (26-94)||(4516442-4516510)
chr2 (26-94)||(33795261-33795329)
chr2 (24-94)||(40416962-40417032)
chr2 (25-94)||(39914397-39914466)
chr2 (26-125)||(44521431-44521532)
chr2 (19-94)||(26684712-26684788)
chr2 (35-94)||(4852305-4852364)
chr2 (19-90)||(14544032-14544103)
chr2 (35-102)||(25641487-25641554)
chr2 (25-105)||(44643497-44643579)
chr2 (28-94)||(17472949-17473015)
chr2 (26-126)||(23145755-23145857)
chr2 (26-126)||(23557545-23557647)
chr2 (49-126)||(10546161-10546241)
chr2 (19-127)||(24860044-24860152)
chr2 (35-79)||(31821447-31821491)
[»] chr5 (31 HSPs)
chr5 (19-126)||(41014288-41014396)
chr5 (18-117)||(27328720-27328821)
chr5 (19-126)||(8170041-8170148)
chr5 (20-93)||(37024646-37024719)
chr5 (35-126)||(22907922-22908014)
chr5 (19-117)||(38879550-38879650)
chr5 (19-94)||(43334171-43334246)
chr5 (26-126)||(2838754-2838856)
chr5 (19-93)||(35710282-35710356)
chr5 (26-122)||(208989-209086)
chr5 (28-93)||(22861758-22861823)
chr5 (19-126)||(24448859-24448968)
chr5 (19-117)||(4619172-4619272)
chr5 (20-122)||(31299602-31299705)
chr5 (37-126)||(32703411-32703500)
chr5 (34-126)||(1850624-1850717)
chr5 (26-94)||(23974756-23974824)
chr5 (30-94)||(34074653-34074717)
chr5 (19-94)||(1565400-1565475)
chr5 (27-94)||(22187262-22187329)
chr5 (26-94)||(28516525-28516593)
chr5 (25-126)||(22600429-22600532)
chr5 (26-69)||(39079882-39079925)
chr5 (26-104)||(39301099-39301178)
chr5 (53-126)||(43574609-43574684)
chr5 (33-71)||(9794473-9794511)
chr5 (25-79)||(17419889-17419943)
chr5 (61-126)||(19143000-19143066)
chr5 (49-94)||(22025542-22025587)
chr5 (25-66)||(31362454-31362495)
chr5 (30-78)||(10634253-10634301)
[»] chr4 (55 HSPs)
chr4 (19-126)||(5648228-5648336)
chr4 (19-126)||(6430683-6430791)
chr4 (19-126)||(14590806-14590916)
chr4 (19-131)||(30639349-30639462)
chr4 (19-126)||(48598882-48598989)
chr4 (19-94)||(54730218-54730293)
chr4 (19-126)||(5306721-5306829)
chr4 (19-125)||(11054206-11054312)
chr4 (20-126)||(47528587-47528693)
chr4 (25-126)||(40915804-40915906)
chr4 (19-117)||(16911531-16911631)
chr4 (19-126)||(20224953-20225060)
chr4 (19-94)||(16408694-16408769)
chr4 (31-93)||(39077886-39077948)
chr4 (25-94)||(44363223-44363292)
chr4 (18-102)||(55830803-55830888)
chr4 (26-105)||(17315378-17315457)
chr4 (19-94)||(21646933-21647008)
chr4 (19-94)||(30352682-30352757)
chr4 (26-105)||(42164228-42164307)
chr4 (30-126)||(17043451-17043549)
chr4 (26-126)||(47441587-47441689)
chr4 (29-125)||(30496380-30496476)
chr4 (28-105)||(32478865-32478942)
chr4 (19-126)||(8473679-8473786)
chr4 (26-90)||(12257688-12257752)
chr4 (24-126)||(47443927-47444035)
chr4 (29-104)||(49938671-49938746)
chr4 (28-94)||(23580299-23580365)
chr4 (30-122)||(54175043-54175137)
chr4 (25-94)||(14983809-14983878)
chr4 (18-117)||(55766532-55766633)
chr4 (26-90)||(487230-487294)
chr4 (20-126)||(37494821-37494929)
chr4 (28-126)||(9832370-9832468)
chr4 (19-94)||(10660373-10660448)
chr4 (19-94)||(10874518-10874593)
chr4 (25-126)||(19027823-19027926)
chr4 (25-122)||(25343162-25343261)
chr4 (26-77)||(50856344-50856395)
chr4 (25-71)||(5313108-5313154)
chr4 (19-69)||(23501762-23501812)
chr4 (36-94)||(25463108-25463166)
chr4 (28-94)||(30690274-30690340)
chr4 (35-105)||(32629348-32629418)
chr4 (33-94)||(7385567-7385628)
chr4 (26-91)||(43035224-43035289)
chr4 (26-94)||(35567146-35567214)
chr4 (33-93)||(41018885-41018945)
chr4 (26-94)||(54640430-54640498)
chr4 (26-94)||(54966997-54967065)
chr4 (68-126)||(7909338-7909397)
chr4 (25-103)||(44357195-44357274)
chr4 (27-69)||(3580952-3580994)
chr4 (49-126)||(29207955-29208032)
[»] chr1 (51 HSPs)
chr1 (19-126)||(32632614-32632722)
chr1 (19-126)||(34725155-34725262)
chr1 (27-126)||(38478339-38478438)
chr1 (19-126)||(47214503-47214610)
chr1 (26-92)||(14617037-14617103)
chr1 (19-104)||(22930148-22930233)
chr1 (25-124)||(41319865-41319966)
chr1 (26-94)||(18724636-18724704)
chr1 (25-97)||(27474279-27474351)
chr1 (19-126)||(45812594-45812701)
chr1 (18-126)||(23768377-23768487)
chr1 (19-97)||(45402087-45402164)
chr1 (26-126)||(11596512-11596613)
chr1 (22-126)||(19414434-19414538)
chr1 (27-126)||(25468320-25468421)
chr1 (19-117)||(18944635-18944735)
chr1 (19-117)||(30395794-30395894)
chr1 (25-92)||(20036218-20036285)
chr1 (25-122)||(27201645-27201744)
chr1 (19-82)||(34714615-34714678)
chr1 (25-126)||(46248010-46248113)
chr1 (26-122)||(17470407-17470505)
chr1 (20-94)||(20004183-20004257)
chr1 (20-94)||(46991797-46991871)
chr1 (25-94)||(6925098-6925167)
chr1 (19-94)||(10668212-10668292)
chr1 (26-105)||(35117847-35117927)
chr1 (26-97)||(33222983-33223054)
chr1 (29-87)||(9939463-9939521)
chr1 (27-123)||(12126897-12126993)
chr1 (29-94)||(22327101-22327166)
chr1 (27-126)||(44485166-44485267)
chr1 (26-94)||(2435878-2435946)
chr1 (26-94)||(2435984-2436052)
chr1 (25-126)||(4430083-4430186)
chr1 (19-94)||(18335379-18335454)
chr1 (26-94)||(25290162-25290232)
chr1 (20-94)||(8197036-8197110)
chr1 (61-122)||(22324927-22324989)
chr1 (49-126)||(35253244-35253321)
chr1 (26-94)||(27136743-27136811)
chr1 (19-71)||(40424734-40424786)
chr1 (26-90)||(50760321-50760385)
chr1 (49-122)||(35005145-35005220)
chr1 (25-79)||(6983915-6983969)
chr1 (49-126)||(31272432-31272510)
chr1 (19-68)||(19932869-19932918)
chr1 (49-94)||(23371146-23371191)
chr1 (19-94)||(18742051-18742127)
chr1 (26-94)||(50811938-50812006)
chr1 (26-94)||(52910216-52910284)
[»] scaffold0005 (1 HSPs)
scaffold0005 (19-126)||(226462-226572)
[»] chr3 (42 HSPs)
chr3 (19-105)||(10870031-10870117)
chr3 (19-131)||(12914087-12914201)
chr3 (19-126)||(26869698-26869806)
chr3 (19-125)||(7696945-7697051)
chr3 (19-94)||(8247780-8247855)
chr3 (25-126)||(22122974-22123075)
chr3 (26-126)||(22609764-22609865)
chr3 (19-126)||(16735432-16735540)
chr3 (18-94)||(26782356-26782432)
chr3 (19-117)||(46421103-46421203)
chr3 (19-125)||(1217081-1217187)
chr3 (29-104)||(5173801-5173876)
chr3 (19-94)||(13730695-13730770)
chr3 (29-117)||(13628858-13628948)
chr3 (19-126)||(40272869-40272978)
chr3 (27-126)||(39203515-39203614)
chr3 (18-124)||(6411881-6411988)
chr3 (27-94)||(34420735-34420802)
chr3 (19-90)||(52926305-52926376)
chr3 (26-126)||(26573125-26573227)
chr3 (25-117)||(29366788-29366882)
chr3 (19-126)||(4495721-4495830)
chr3 (30-94)||(30928238-30928302)
chr3 (26-94)||(35417914-35417982)
chr3 (26-94)||(45620920-45620988)
chr3 (26-94)||(53062036-53062104)
chr3 (36-94)||(516417-516475)
chr3 (27-94)||(9607202-9607269)
chr3 (22-127)||(21796831-21796937)
chr3 (39-105)||(33926094-33926160)
chr3 (26-122)||(53996627-53996725)
chr3 (31-126)||(7942993-7943090)
chr3 (51-126)||(54032616-54032693)
chr3 (26-94)||(19731000-19731068)
chr3 (26-66)||(48667156-48667196)
chr3 (27-94)||(25944468-25944535)
chr3 (26-72)||(31542411-31542457)
chr3 (61-126)||(31592882-31592947)
chr3 (39-122)||(45139539-45139624)
chr3 (74-126)||(47624088-47624141)
chr3 (56-122)||(10795486-10795554)
chr3 (26-94)||(19751576-19751644)
[»] chr7 (57 HSPs)
chr7 (19-94)||(19426980-19427055)
chr7 (19-93)||(47077945-47078019)
chr7 (26-126)||(40463853-40463954)
chr7 (19-126)||(21172066-21172173)
chr7 (19-117)||(43557441-43557541)
chr7 (19-94)||(27629603-27629678)
chr7 (19-126)||(2541076-2541186)
chr7 (25-126)||(33871967-33872069)
chr7 (19-104)||(42495916-42496001)
chr7 (19-126)||(42798638-42798747)
chr7 (27-126)||(10693130-10693229)
chr7 (19-126)||(32758230-32758337)
chr7 (19-126)||(34626265-34626373)
chr7 (25-97)||(39123865-39123937)
chr7 (19-117)||(46354163-46354263)
chr7 (19-105)||(18327003-18327089)
chr7 (19-126)||(11617645-11617754)
chr7 (30-126)||(28078189-28078286)
chr7 (25-94)||(42805499-42805568)
chr7 (18-94)||(22699061-22699137)
chr7 (19-83)||(35334916-35334980)
chr7 (26-94)||(29907393-29907463)
chr7 (32-126)||(42391157-42391251)
chr7 (25-126)||(42476848-42476949)
chr7 (27-92)||(7193062-7193127)
chr7 (26-126)||(19265791-19265892)
chr7 (19-126)||(48735179-48735287)
chr7 (26-94)||(3469270-3469338)
chr7 (27-126)||(6736867-6736967)
chr7 (26-94)||(16341254-16341322)
chr7 (26-94)||(28362236-28362304)
chr7 (19-94)||(7794597-7794672)
chr7 (18-103)||(5180238-5180324)
chr7 (54-123)||(15108457-15108527)
chr7 (49-126)||(31591166-31591243)
chr7 (29-117)||(47716438-47716528)
chr7 (26-126)||(48123541-48123643)
chr7 (25-94)||(7644931-7645000)
chr7 (25-93)||(13805077-13805145)
chr7 (19-94)||(1424001-1424076)
chr7 (25-115)||(22065563-22065654)
chr7 (51-94)||(38262287-38262330)
chr7 (26-126)||(23419731-23419833)
chr7 (44-94)||(35203433-35203483)
chr7 (26-96)||(44123710-44123780)
chr7 (51-126)||(7879639-7879716)
chr7 (26-94)||(14099097-14099165)
chr7 (26-94)||(14409114-14409182)
chr7 (19-79)||(14732928-14732988)
chr7 (49-105)||(32233214-32233270)
chr7 (73-131)||(38604550-38604609)
chr7 (29-126)||(11741774-11741871)
chr7 (49-126)||(18512510-18512588)
chr7 (49-94)||(8491918-8491963)
chr7 (49-94)||(8518727-8518772)
chr7 (26-104)||(12473280-12473359)
chr7 (26-94)||(42101976-42102044)
[»] scaffold0187 (2 HSPs)
scaffold0187 (18-123)||(10110-10215)
scaffold0187 (18-123)||(20438-20543)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-126)||(30548-30655)
[»] scaffold1176 (1 HSPs)
scaffold1176 (18-124)||(1646-1752)
[»] scaffold0258 (1 HSPs)
scaffold0258 (26-126)||(13081-13182)
[»] scaffold0223 (1 HSPs)
scaffold0223 (19-126)||(11101-11207)
[»] scaffold0057 (3 HSPs)
scaffold0057 (19-94)||(46800-46875)
scaffold0057 (19-126)||(24829-24933)
scaffold0057 (27-71)||(46997-47041)
[»] scaffold0254 (1 HSPs)
scaffold0254 (27-93)||(4134-4200)
[»] scaffold0049 (1 HSPs)
scaffold0049 (20-94)||(58947-59021)
[»] scaffold0036 (1 HSPs)
scaffold0036 (20-126)||(35074-35184)
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-127)||(72923-73027)
[»] scaffold0116 (1 HSPs)
scaffold0116 (25-97)||(8866-8938)
[»] scaffold0024 (1 HSPs)
scaffold0024 (27-78)||(83852-83903)
[»] scaffold0311 (1 HSPs)
scaffold0311 (20-94)||(10780-10854)
[»] scaffold0194 (1 HSPs)
scaffold0194 (21-79)||(24635-24693)


Alignment Details
Target: scaffold0031 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 19 - 362
Target Start/End: Original strand, 43098 - 43441
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggcgcatacaatacat 118  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |   ||||||||||    
T  43098 cgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaacagagtaagacatttacaatacat 43197  T
Q  119 caaatggtaagacgcgggagcttcaatacatcgaattgtgcttttataagtaatttagtatagtagagacacactctttaatttcattcatttgtagata 218  Q
    ||||||||  ||||||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43198 caaatggtgggacgcggcagcttcagtacaccgaattgtccttttataagtaatttagtatagtagagacacactctttaatttcattcatttgtagata 43297  T
Q  219 aactaaaatcaaataaaagagagacaccctctttgactctattttgcaccgtcaaggcgatagcttattatggatagtggacaggtcataacatagtatg 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  43298 aactaaaatcaaataaaagagagacaccctctttgactctattttgcaccgtcaaggcgatagcttataatggatagtggacaggtcgtaacatagtatg 43397  T
Q  319 gacagatatttgcggtacggtttgttaaagttaaaagttatcca 362  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  43398 gacagatatttgcggtacggtttggtaaagttaaaagttatcca 43441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 13160671 - 13160779
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| || |||||||||    
T  13160671 cgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaataca 13160770  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  13160771 ccaaatggt 13160779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 2626488 - 2626563
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  2626488 cgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 2626563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 45071240 - 45071342
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||||||||||||||||||| | ||||||||| |||||||| || ||||||| ||||||||||||||||| ||||||| || ||||||||| |||||    
T  45071240 tggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaat 45071339  T
Q  124 ggt 126  Q
    |||    
T  45071340 ggt 45071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 12670414 - 12670307
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||| || |||||||||    
T  12670414 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaataca 12670316  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  12670315 ccaaatggt 12670307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 17823545 - 17823621
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaac 95  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  17823545 cgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaac 17823621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 28407385 - 28407471
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||    
T  28407385 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggc 28407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 39461162 - 39461062
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||| || ||||||||    
T  39461162 cgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatac 39461063  T
Q  117 a 117  Q
    |    
T  39461062 a 39461062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 36720771 - 36720874
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||| |||||||| ||||||| || ||||||||| ||||    
T  36720771 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 36720870  T
Q  123 tggt 126  Q
    ||||    
T  36720871 tggt 36720874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 18164914 - 18164840
Alignment:
Q  30 aagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg 104  Q
    |||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||    
T  18164914 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaagg 18164840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 20869662 - 20869588
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| |||||||||||||    
T  20869662 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20869588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 30454261 - 30454187
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| |||||||||||||    
T  30454261 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 30454187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 30962929 - 30962864
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||||||    
T  30962929 aaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaa 30962864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 35261648 - 35261757
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaagg-cgcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||| ||| ||||||||||||||||| |||||||| ||||||  || ||||||||    
T  35261648 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgtacaatac 35261747  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  35261748 accaaatggt 35261757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 26954104 - 26954176
Alignment:
Q  22 aattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||||||||   ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  26954104 aattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 26954176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 28817791 - 28817683
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaataca 117  Q
    |||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| |||||||||| ||||||| ||||||| || |||||||||    
T  28817791 gcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaataca 28817692  T
Q  118 tcaaatggt 126  Q
     | ||||||    
T  28817691 cccaatggt 28817683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 20284232 - 20284164
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  20284232 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 20284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 21070861 - 21070793
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  21070861 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 21070793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 29521851 - 29521742
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| || ||||||||||||| |||||  | ||||||||| ||||||||||| ||||||| ||||||| | |||||||| ||||||| || ||||||||    
T  29521851 cgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgtacaatac 29521752  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  29521751 accaaatggt 29521742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7136695 - 7136619
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaac 95  Q
    ||||| ||||||||||||||||||||||  | ||||||| | ||||||||||| ||||||  |||||||||||||||    
T  7136695 cgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaac 7136619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 14018128 - 14018060
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| |||||||||| ||||| ||||||||| | ||||||||| | ||||||||||||||||||||||    
T  14018128 ggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaa 14018060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 6760791 - 6760866
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| |||||||||||||||||| |||    ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  6760791 cgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 6760866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 24245421 - 24245491
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaa 91  Q
    |||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||| ||||||| |||||    
T  24245421 gcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac-gtctcttatgtaa 24245491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 24365218 - 24365151
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||   ||| |||||| ||||||| ||||||||||| ||||||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaa 24365151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 25250497 - 25250566
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||||  | ||||||||  ||||||||||| ||||||| || |||||||||||    
T  25250497 tggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaa 25250566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 44530118 - 44530227
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||| ||||||||||    ||||||||| ||||||||| | ||||||  ||||||||| |||||||| ||||||| || ||||||||    
T  44530118 cgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatac 44530217  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  44530218 accaaatggt 44530227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 31457155 - 31457251
Alignment:
Q  32 gttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggta 127  Q
    ||||||||||||||   ||||||||||| |||||||||||  |||||  |||||||||||||| ||   ||||| || |||||||||||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaataggaaaaggctgcgtacaatacatcaaatggta 31457251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 42083858 - 42083790
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| ||||||||| ||||  ||||||||||| ||||||||||| ||||||| || |||||||||||    
T  42083858 ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaa 42083790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 44781665 - 44781585
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc 105  Q
    |||||||||||||||| ||||  ||||| ||||| ||||||||||| ||||||  ||||||||||||| |||| |||||||    
T  44781665 ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggc 44781585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 44742678 - 44742580
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    |||||||||||||||  ||||| | ||||||| |||||||||| || |||||| |||| ||||| |||||||| ||||||| || ||||||||| ||||    
T  44742678 ggtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 44742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 8897924 - 8897855
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||||  | ||||||||| ||| ||||||| ||||||  | ||||||||||||    
T  8897924 tggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 8897855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 12625856 - 12625968
Alignment:
Q  17 cacgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt--aaaaacagagtaaggc-gcatacaa 113  Q
    ||||||| |||||||||||||||| |||||     |||||||| | ||||||||| ||||||  |||||||||  |||||||| ||||| | ||||||||    
T  12625856 cacgcaactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaa 12625955  T
Q  114 tacatcaaatggt 126  Q
    |||| ||||||||    
T  12625956 tacaccaaatggt 12625968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 22598133 - 22598201
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||  |||  ||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaa 22598201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 23000365 - 23000276
Alignment:
Q  36 ttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg-cgcatacaatacatcaaatggt 126  Q
    |||||||||||  ||||||||||| ||  ||||||| ||||||| ||||||||||||||||  ||||||   ||||||||||| ||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaacacggtaaggttccatacaatacaccaaatggt 23000276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 35105902 - 35105966
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||||||||||| |||   ||||||||||| ||||||||||| ||||||  |||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 35105966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 11748269 - 11748343
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| |||| || ||||||||||||||  |||| |||||| ||||||||| | ||||||| ||||| ||||||||    
T  11748269 gcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaa 11748343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 11001109 - 11001069
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaa 66  Q
    |||||||||||||||||||||| |||||||| || ||||||    
T  11001109 ggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaa 11001069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 26457691 - 26457759
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||  ||||| ||||||||| | ||||| ||| || ||| ||| |||||||||||||    
T  26457691 ggtaaagttgttgtcgcgtgattgaaaggtcatgggttcaggtcttaaaaagagtttcttgtgtaaaaa 26457759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 40607891 - 40607839
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcc 70  Q
    ||||||||||||||||||||||||||| |  | || |||| ||||||||||||    
T  40607891 acgcaattggtaaagttgttgtcatgtaactggaatgtcatgagttcaagtcc 40607839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 9161091 - 9161195
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatac 116  Q
    ||||||| |||||||||||||||||||||  ||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||||| || ||||||||    
T  9161091 acgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagtaaggctgcgtacaatac 9161190  T
Q  117 atcaa 121  Q
    |||||    
T  9161191 atcaa 9161195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 1346933 - 1347040
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| | ||||||| ||||||| ||||||| || |||||||||    
T  1346933 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgt-aaaacagggtaaggctgcgtacaataca 1347031  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  1347032 ccaaatggt 1347040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 1354921 - 1354814
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||  ||||||||||| ||||||| ||||||||| ||||||| ||||||| || |||||||||    
T  1354921 cgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaataca 1354823  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  1354822 ccaaatggt 1354814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 6024201 - 6024277
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| ||||||||||||||||||||||| | |||||||||  ||||| |||||||||||| ||||||||||||||    
T  6024201 acgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaa 6024277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 12222083 - 12221983
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||| | ||||||| |||||||||| ||||||| ||||||| || ||||||||    
T  12222083 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 12221984  T
Q  117 a 117  Q
    |    
T  12221983 a 12221983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 3815243 - 3815168
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  |||| |||||| ||||||||||| ||||||| || |||||||||||    
T  3815243 cgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaa 3815168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 29356009 - 29355923
Alignment:
Q  33 ttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaa-aaacagagtaaggc-gcatacaataca 117  Q
    ||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||| |||||| ||||||| || |||||||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaataca 29355923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 14975239 - 14975171
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  | |||||||||  |||||||||| ||||||| ||||||||||||||    
T  14975239 ggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaa 14975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 8409212 - 8409287
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||| ||||||  |||||||||||  |||||||||| ||||| | ||||||||||||||    
T  8409212 cgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaa 8409287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 20400636 - 20400711
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||| ||||||||||||||||  ||||||||||  ||||||||  | |||||| |||||||||||||||    
T  20400636 cgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaa 20400711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 24734602 - 24734677
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  |||||||||  ||||||| |||| ||||||  ||||||||||||||    
T  24734602 cgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaaa 24734677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 2166570 - 2166504
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||||||||||| ||||||  ||||||||||| ||||||||||| ||||||  |||||||||||||    
T  2166570 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 2166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 2178203 - 2178137
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||||||||||| ||||||  ||||||||||| ||||||||||| ||||||  |||||||||||||    
T  2178203 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 2178137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 13905138 - 13905036
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||||||||||||||  ||||||||||| | |||||||||  ||||   |||||||||| ||||||| ||||||| ||||||||| || |||||    
T  13905138 ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggctgcatacaattcaccaaat 13905039  T
Q  124 ggt 126  Q
    |||    
T  13905038 ggt 13905036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 8417442 - 8417504
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtct 82  Q
    |||| ||||||||||||||||||||||  |||| |||||||||||| ||| | ||||||||||    
T  8417442 gcaactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaacagtct 8417504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 12063445 - 12063511
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||| ||||| ||  ||||||||||| |||||||||||||||| || ||||||| ||||||    
T  12063445 taaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaa 12063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 14553482 - 14553555
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| |||||||||||||||||||||| | |||||||||  ||||||||||| |||| ||  |||||||||||||    
T  14553482 gcaactggtaaagttgttgtcatgtga-ctaaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaa 14553555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 12889402 - 12889495
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtg-taaaaacagagtaaggc-gcatacaataca 117  Q
    |||||||||||||||| ||||  ||||||||||  ||||||||| |  |||||| |||||||| ||||||||| | ||||| ||||||||||||    
T  12889402 ggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggcaaggctgcatacaataca 12889495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 15866197 - 15866128
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||| |||||||| ||||||||| | |||||| |||| ||||||| |||||  |||||||    
T  15866197 tggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaa 15866128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 28007604 - 28007671
Alignment:
Q  28 taaagttgttgtcatgtga--tcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    |||||||||||||||||||  |  |||||||||| ||||||||||| |||| || |||||||||||||    
T  28007604 taaagttgttgtcatgtgacatgaaaaggtcacgggttcaagtcctggaaagagcctcttgtgtaaaa 28007671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 24097556 - 24097625
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||| ||| |||||||| |  ||||||||||||||| ||||||| ||| ||| ||||||| ||||||    
T  24097556 tggtaaaattgatgtcatgttactgaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaa 24097625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 33138838 - 33138911
Alignment:
Q  55 tcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaagg-cgcatacaatacatcaaatggt 126  Q
    ||||| ||||||||||| ||||||  ||||||| | ||||||||||||||| ||| ||||||||| ||||||||    
T  33138838 tcacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacaccaaatggt 33138911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 32068074 - 32068137
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||| |||| |||||||||||  ||||||||| | |||||   ||||||||||||||    
T  32068074 taaagttgttgtcacgtgaccgaaaggtcacatgttcaagtcttggaaac---ctcttgtgtaaaaa 32068137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 12024084 - 12023976
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||| || |||||||||    
T  12024084 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaataca 12023985  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  12023984 ccaaatggt 12023976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 25249903 - 25249795
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||||||||||||||||||||||||||  | ||||||||| ||||||||| | |||||||||||||||||| |||||| ||||||| || |||||||||    
T  25249903 cgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacagggtaaggctgcgtacaataca 25249804  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  25249803 ccaaatggt 25249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 8455482 - 8455373
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||| || ||||||||    
T  8455482 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgtacaatac 8455383  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  8455382 accaaatggt 8455373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 17896227 - 17896303
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| |||||||||||||||||||||| ||||||||||||  |||||||||||||||||  ||||||||||||||    
T  17896227 acgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaa 17896303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 11514405 - 11514514
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  | ||||||||| |||||| |||| ||||||| ||||||||| ||||||| |||||||| || ||||||||    
T  11514405 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgtacaatac 11514504  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  11514505 accaaatggt 11514514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 24200790 - 24200686
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaataca 117  Q
    |||| ||||||||||||||||||||||  |||| |||||| ||||||||||| ||||||| |||||||||| ||||||| ||||||| || |||||||||    
T  24200790 gcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaataca 24200691  T
Q  118 tcaaa 122  Q
     ||||    
T  24200690 ccaaa 24200686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 14530287 - 14530362
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  14530287 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 14530362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 7214509 - 7214603
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc-gcatacaataca 117  Q
    ||||||||||||||||||||||  ||||||||| | ||||||||| | ||||||||||||||||||||| |||| ||||||| || |||||||||    
T  7214509 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaataca 7214603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 45235976 - 45235910
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||| |||||||    
T  45235976 gtaaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaa 45235910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 10543667 - 10543772
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| || |||||||||||||||||||  ||||||||||| ||||||||||| ||||| | ||||||||| |||||||| ||||||| || ||||||||    
T  10543667 cgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 10543766  T
Q  117 atcaaa 122  Q
    | ||||    
T  10543767 accaaa 10543772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 23397736 - 23397809
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    |||| ||||||||||||||||||||||  ||||||||| | ||||||||||| ||||||| |||||||||||||    
T  23397736 gcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaa 23397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 21377232 - 21377164
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| ||||||||  ||||||||||||||    
T  21377232 ggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaa 21377164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 21779425 - 21779318
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg-cgcatacaataca 117  Q
    ||||| |||| |||||||||||||||||  ||||||||||| ||||||||||| || |||| ||||||||| ||||||| ||||||  || |||||||||    
T  21779425 cgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgt-aaaacagggtaaggttgcgtacaataca 21779327  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  21779326 ccaaatggt 21779318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 17623539 - 17623642
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa-cagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||||||||| ||  | ||||||||| ||||||||||| ||||||  |||||||||||||| ||| ||||||| || ||||||||| ||||    
T  17623539 tggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa 17623638  T
Q  123 tggt 126  Q
    ||||    
T  17623639 tggt 17623642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 17667977 - 17668080
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa-cagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||| |||| |  |||||||||||||| ||| ||||||| || ||||||||| ||||    
T  17667977 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacaccaaa 17668076  T
Q  123 tggt 126  Q
    ||||    
T  17668077 tggt 17668080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 22371032 - 22371132
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||||||||||||||||||  |  |||||||| ||||||||||| ||||||| |||  |||||||||||| ||||||| || ||||||||| |||||    
T  22371032 tggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc--gtgtaaaaacagggtaaggctgcgtacaatacaccaaat 22371129  T
Q  124 ggt 126  Q
    |||    
T  22371130 ggt 22371132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 25079884 - 25079809
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||| ||||||||  ||||||||||||||    
T  25079884 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaa 25079809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 5841006 - 5841072
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||  | ||||||||| ||||||||||||||||||| || |||||||||||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaa 5841072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 9671156 - 9671257
Alignment:
Q  26 ggtaaagttgttgtcatgtga-tcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||||||||||||||||| | |||| |||||| |||||| |||| ||||||| ||||||||| ||||||| ||||||| || ||||||||| |||||    
T  9671156 ggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaat 9671254  T
Q  124 ggt 126  Q
    |||    
T  9671255 ggt 9671257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 17380391 - 17380317
Alignment:
Q  30 aagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg 104  Q
    ||||||||||||||||| |||||||||||| ||||||||| | ||||||  |||||||||| |||||| ||||||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacagggtaagg 17380317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 17705465 - 17705551
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaa-aacagagtaaggc 105  Q
    |||| ||||||||||||||||||||||    ||||||||| ||||||||||| ||||| | |||||||||||| |||||||||||||    
T  17705465 gcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggc 17705551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 19977874 - 19977805
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| ||||||||||||||||| |||||||||||| |||||||| || ||||||| ||||| ||||||||    
T  19977874 tggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaa 19977805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 99421 - 99361
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgt 87  Q
    ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||| |||||||    
T  99421 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt 99361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 27573590 - 27573698
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  |||||||||   ||||||||||  | ||||| |||||||||| |||||  ||||||| || |||||||||    
T  27573590 cgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaacatggtaaggctgcgtacaataca 27573689  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  27573690 ccaaatggt 27573698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 29420048 - 29419980
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||  |||  ||||||||||||||||||||||| ||||||  ||||||||||||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaa 29419980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 44604832 - 44604907
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaag 103  Q
    |||||||||||||||||||  | ||||||||  ||||||||||| ||||||  ||||||||||||||||| |||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggtaag 44604907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 5450263 - 5450329
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||  ||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaa 5450329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 14444730 - 14444784
Alignment:
Q  51 aaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||    
T  14444730 aaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggc 14444784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 4516510 - 4516442
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| ||||  ||||||||||   ||||||| |||||||||| ||||||||||||||    
T  4516510 ggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaa 4516442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 33795261 - 33795329
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||  |||||| |||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaa 33795329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 40417032 - 40416962
Alignment:
Q  24 ttggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||| | ||||||  ||||||| ||||||    
T  40417032 ttggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaa 40416962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 39914466 - 39914397
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||||  | ||||||||| | |||||| || ||||||  ||||||||||||||    
T  39914466 tggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaa 39914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 44521532 - 44521431
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||||| ||| ||||  ||||||||||| |||||| || | |||||| ||||||||||| ||||||  ||||||| ||||| |||||| |||||    
T  44521532 ggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaaggctgcatataatacaccaaat 44521433  T
Q  124 gg 125  Q
    ||    
T  44521432 gg 44521431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 26684788 - 26684712
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacag-tctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||| |||||||||   ||| |||||||  ||||||  ||||||||||||||    
T  26684788 cgcaactggtaaagttgttgtcatgtgattgaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaa 26684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 4852364 - 4852305
Alignment:
Q  35 gttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||| ||||| |||| | |||||||||||  ||||||||||||||| |||||    
T  4852364 gttgtcatgtgaccgaaaagtcaggggttcaagtcctgcaaacagtctcttgtgaaaaaa 4852305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 14544032 - 14544103
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta 90  Q
    ||||||||||||||||||||||||||||  ||||||| ||  || || || || ||||||| ||||||||||    
T  14544032 cgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgta 14544103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 25641487 - 25641554
Alignment:
Q  35 gttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaa 102  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||||  | |||||| ||||||| ||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacagggtaa 25641554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 44643497 - 44643579
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctctt--gtgtaaaaacagagtaaggc 105  Q
    ||||||||||||  ||||||||  ||||||||||| |||||||| ||||||| || |||||  ||  ||||||||||||||||    
T  44643497 tggtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagttctagaaagagcctcttccgtaaaaaaacagagtaaggc 44643579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 17472949 - 17473015
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||  |||| ||||||||||| ||||| ||| |||||| || || |||||||||||    
T  17472949 taaagttgttgtcaaatgattgaaaggtcacgggttcaggtcttagaaatagcctattgtgtaaaaa 17473015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 23145857 - 23145755
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||||||||||   ||||  ||||||||||| ||||||||| |  |||||| |||||||||| ||||||| ||||||| || ||||||||| ||| |    
T  23145857 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaatt 23145758  T
Q  124 ggt 126  Q
    |||    
T  23145757 ggt 23145755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 23557647 - 23557545
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||||||||||   ||||  ||||||||||| ||||||||| |  |||||| |||||||||| ||||||| ||||||| || ||||||||| ||| |    
T  23557647 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaatt 23557548  T
Q  124 ggt 126  Q
    |||    
T  23557547 ggt 23557545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 10546161 - 10546241
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgt--aaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||| ||||||||||| ||||||  ||||||| |  |||||||| ||||||| || ||||||||| ||||||||    
T  10546161 gaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaatggt 10546241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 24860152 - 24860044
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggcgcatacaatacat 118  Q
    ||||| ||||||| ||||||||||||||  | ||||| ||| ||| ||| ||| ||||||  |||| |||||||||||  ||| |  || |||||||||     
T  24860152 cgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaacatggtaggctgcgtacaatacac 24860053  T
Q  119 caaatggta 127  Q
    |||||||||    
T  24860052 caaatggta 24860044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 31821491 - 31821447
Alignment:
Q  35 gttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacag 79  Q
    ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  31821491 gttgttatgtgactgaaaggtcacgagttcaagtcgtagaaacag 31821447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 41014288 - 41014396
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||| || |||||||||    
T  41014288 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaataca 41014387  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  41014388 ccaaatggt 41014396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 27328720 - 27328821
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaata 115  Q
    |||||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||||||||||||||||| |||||||| ||||||| || |||||||    
T  27328720 acgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaata 27328819  T
Q  116 ca 117  Q
    ||    
T  27328820 ca 27328821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 8170148 - 8170041
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| || |||||| ||||||| ||||||| || |||||||||    
T  8170148 cgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgt-aaaacagggtaaggctgcgtacaataca 8170050  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  8170049 ccaaatggt 8170041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 37024719 - 37024646
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    |||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| |||||||||||||    
T  37024719 gcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 22908014 - 22907922
Alignment:
Q  35 gttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg-cgcatacaatacatcaaatggt 126  Q
    ||||| ||||||  ||||||||| | |||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagtaaggttgcatacaatacaccaaatggt 22907922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 38879550 - 38879650
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||| | |||||||| ||||||| || ||||||||    
T  38879550 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaatac 38879649  T
Q  117 a 117  Q
    |    
T  38879650 a 38879650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 43334171 - 43334246
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||| ||||||||||    
T  43334171 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaa 43334246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 2838754 - 2838856
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcg-aaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||||||||||||||  | |||||||||||| |||||||  ||||||||  |||||||||||||||| ||||||| || ||||||||| |||||    
T  2838754 ggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaat 2838853  T
Q  124 ggt 126  Q
    |||    
T  2838854 ggt 2838856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 35710282 - 35710356
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||| |||||||||||||||||||| |  ||||||||||| ||||||||||| ||||||| |||||||||||||    
T  35710282 cgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 35710356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 209086 - 208989
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    |||||||||||||||||||||   ||||||||| |||||||||||| | ||||  ||||||||||||||||| ||||||| |||| ||||||| ||||    
T  209086 ggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacagggtaaggctgcattcaatacaccaaa 208989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 22861823 - 22861758
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    |||||||||||||||||||  |||||||||||  |||||||||||||| |||||||||||||||||    
T  22861823 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa 22861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 24448859 - 24448968
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| || |||||| ||||| || ||||||| || ||||||||    
T  24448859 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgtacaatac 24448958  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  24448959 accaaatggt 24448968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 4619272 - 4619172
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| |||| || |||||||||| ||||||| ||||||| || ||||||||    
T  4619272 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 4619173  T
Q  117 a 117  Q
    |    
T  4619172 a 4619172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 31299602 - 31299705
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacat 118  Q
    |||| ||||||||||||||||||||||   | ||||||| |||||||||||||||||||| ||||||| | ||||||| ||||  | || ||||||||||    
T  31299602 gcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctcttgtattaaaacagtgtaaaactgcgtacaatacat 31299701  T
Q  119 caaa 122  Q
    ||||    
T  31299702 caaa 31299705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 32703411 - 32703500
Alignment:
Q  37 tgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||| || ||||||||| ||||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggt 32703500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 1850624 - 1850717
Alignment:
Q  34 tgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaa-ggcgcatacaatacatcaaatggt 126  Q
    |||||||||||||  ||||||||||| ||||||||||  |||| |  |||||||||||||||||| ||| || || ||||||||||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaacagaataagggtgcgtacaatacatcaaatggt 1850717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 23974756 - 23974824
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  | ||||||||| ||||||||||| ||||||  ||||||||||||||    
T  23974756 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 23974824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 34074717 - 34074653
Alignment:
Q  30 aagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||  |||  |||||||||| |||||||||||||||||||| ||||||||||||||    
T  34074717 aagttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaa 34074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 1565400 - 1565475
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  |||||||| || ||||||||||| ||||||  |||||| |||||||    
T  1565400 cgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaa 1565475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 22187262 - 22187329
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| |||  ||||||||||  ||| ||||||| ||||||| ||||||||||||||    
T  22187262 gtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaa 22187329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 28516593 - 28516525
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| |||   ||||||||||| ||||||||| | ||||||  ||||||||||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaa 28516525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 22600429 - 22600532
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||| ||||||||  | ||||| ||| ||||||||||| |||||| | | |||||||||| |||| ||||||| |  ||||||||| ||||    
T  22600429 tggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggtaaggctgtgtacaatacaccaaa 22600528  T
Q  123 tggt 126  Q
    ||||    
T  22600529 tggt 22600532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 39079925 - 39079882
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtc 69  Q
    |||||||||||||||||||||  ||||||||||| |||||||||    
T  39079925 ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtc 39079882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 39301099 - 39301178
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaagg 104  Q
    ||||||||||||||||||| |  ||||||||||| ||||||||| | | ||||  |||||||||| ||||||| ||||||    
T  39301099 ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaagg 39301178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 43574609 - 43574684
Alignment:
Q  53 ggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||| ||||||||||| |||||| ||||||||||| ||||||| ||||||| || ||||||| | ||||||||    
T  43574609 ggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatataccaaatggt 43574684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 9794511 - 9794473
Alignment:
Q  33 ttgttgtcatgtgatcgaaaggtcacgagttcaagtcct 71  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  9794511 ttgttgtcatgtgatcaaaaggtcacgggttcaagtcct 9794473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 17419889 - 17419943
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacag 79  Q
    ||||||| ||||||| ||||||  ||||||| ||||||||||||||| |||||||    
T  17419889 tggtaaaattgttgtaatgtgactgaaaggttacgagttcaagtcctggaaacag 17419943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 19143066 - 19143000
Alignment:
Q  61 gttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||| ||||||  ||||||||||||||||| ||||||| || |||| |||| ||||||||    
T  19143066 gttcaagtcctggaaacaacctcttgtgtaaaaacagggtaaggctgcgtacagtacaccaaatggt 19143000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 22025542 - 22025587
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  22025542 gaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaa 22025587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 31362495 - 31362454
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaa 66  Q
    ||||||||||||||||||||||| | ||||||||| ||||||    
T  31362495 tggtaaagttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 10634301 - 10634253
Alignment:
Q  30 aagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaaca 78  Q
    |||||||||||| ||||  ||||||||| | ||||||||||||||||||    
T  10634301 aagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaaca 10634253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 5648228 - 5648336
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||| || |||||||||    
T  5648228 cgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaataca 5648327  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  5648328 ccaaatggt 5648336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 6430791 - 6430683
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||| | ||||||| ||||||||||||||||| ||||||| || |||||||||    
T  6430791 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaataca 6430692  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  6430691 ccaaatggt 6430683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 14590806 - 14590916
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt--aaaaacagagtaaggc-gcatacaata 115  Q
    ||||| ||||||||||||||||||||||  |||||||||||  |||||||||||||||||| ||||||| |  |||||||| ||||||| ||||||||||    
T  14590806 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaata 14590905  T
Q  116 catcaaatggt 126  Q
    |||||||||||    
T  14590906 catcaaatggt 14590916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 30639349 - 30639462
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| |||||||||||||||| |||||  ||||||||||  ||||||||||| ||||||| ||||||||||||||||| ||||||| || |||||||||    
T  30639349 cgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacagggtaaggctgcgtacaataca 30639448  T
Q  118 tcaaatggtaagac 131  Q
     |||||||| ||||    
T  30639449 ccaaatggtgagac 30639462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 48598989 - 48598882
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||| || |||||||||    
T  48598989 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaataca 48598891  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  48598890 ccaaatggt 48598882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 54730218 - 54730293
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||||||| ||||||||||||||    
T  54730218 cgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa 54730293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 5306829 - 5306721
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg-cgcatacaataca 117  Q
    ||||| ||||||||||| ||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||||| ||| ||||||  || |||||||||    
T  5306829 cgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatcagggtaaggttgcgtacaataca 5306730  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  5306729 ccaaatggt 5306721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 11054312 - 11054206
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||  |||||||||||||||| ||||||| ||||| | || |||||||||    
T  11054312 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt-aaaacagggtaagactgcgtacaataca 11054214  T
Q  118 tcaaatgg 125  Q
     |||||||    
T  11054213 ccaaatgg 11054206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 47528693 - 47528587
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacat 118  Q
    |||| ||||||||||||||||||||||  ||||||||||  ||||||||||| ||||||| ||||||||| ||||||| ||||||| || |||||||||     
T  47528693 gcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacac 47528595  T
Q  119 caaatggt 126  Q
    ||||||||    
T  47528594 caaatggt 47528587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 40915804 - 40915906
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||||||||||||||||||    ||||||||| ||||||||||| ||||||| ||||||||||||||||  ||||||| || ||||||||| |||||    
T  40915804 tggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacaaggtaaggctgcgtacaatacaccaaat 40915903  T
Q  124 ggt 126  Q
    |||    
T  40915904 ggt 40915906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 16911531 - 16911631
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||   |||||||||| ||||||||||||||||||| |||||||||| ||| ||| ||||||| || ||||||||    
T  16911531 cgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgtacaatac 16911630  T
Q  117 a 117  Q
    |    
T  16911631 a 16911631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 20224953 - 20225060
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||| | ||||||||||| ||||||  ||||||||| ||||||| ||||||| || |||||||||    
T  20224953 cgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgt-aaaacagggtaaggctgcgtacaataca 20225051  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  20225052 ccaaatggt 20225060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 16408769 - 16408694
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  16408769 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 16408694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 39077948 - 39077886
Alignment:
Q  31 agttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 39077886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 44363292 - 44363223
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||  |||||| ||| ||||||||||    
T  44363292 tggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaa 44363223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 55830888 - 55830803
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcac-gagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaa 102  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||||||||||  | |||||||||||||||||  |||||| ||||    
T  55830888 acgcaactggtaaagttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaacagtctcttgtgtgtaaacagggtaa 55830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 17315457 - 17315378
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    |||||||||||||||||||||  ||||||||||| |||||| |||| ||||||  ||||||||||||||||  |||||||    
T  17315457 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaacaaggtaaggc 17315378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 21646933 - 21647008
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  | ||||||||  ||||||||||| ||||||| ||||||||||||||    
T  21646933 cgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 21647008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 30352757 - 30352682
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||| |||| |||||||||||| |||  |||||| ||||||| ||||||||||||||    
T  30352757 cgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaa 30352682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 42164307 - 42164228
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    |||||| ||||||||||||||  ||||||||||| ||||||||| | ||||||  ||||||||||||||||| |||||||    
T  42164307 ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaacagggtaaggc 42164228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 17043549 - 17043451
Alignment:
Q  30 aagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc-gcatacaatacatcaaatggt 126  Q
    |||||||||||| ||||  ||||||||||  ||||||||||| ||||||| ||||||||||||| |||| ||||||| || ||||||||| ||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatggt 17043451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 47441689 - 47441587
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa-cagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||||||||| ||||  ||||||||||  |||||||||| |||||||||||||| |||||||| ||| ||||||| |  ||||||||| |||||    
T  47441689 ggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaaggctgtgtacaatacaccaaat 47441590  T
Q  124 ggt 126  Q
    |||    
T  47441589 ggt 47441587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 30496476 - 30496380
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatgg 125  Q
    ||||||||||||| ||||  ||||||||||| ||||||||| | ||||||| |||||||||||| || | ||||||| |||||||||||| |||||||    
T  30496476 aaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaacac-gggtaaggctgcatacaatacaccaaatgg 30496380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 32478942 - 32478865
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    ||||||||||||||||||| ||| |||||||  ||||||||||| ||||||  |||| |||||||||||| |||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacagggtaaggc 32478865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 8473786 - 8473679
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| |||||||||||||||||| ||| || |||||  || ||||||||||| ||||||| |||||||||   ||||| ||||||| ||||||||||||    
T  8473786 cgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgt-ttaacagggtaaggctgcatacaataca 8473688  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  8473687 ccaaatggt 8473679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 12257752 - 12257688
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta 90  Q
    |||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||  |||||||||    
T  12257752 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttgtgta 12257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 47443927 - 47444035
Alignment:
Q  24 ttggtaaagttgttgtcatgtgatcga----aaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaataca 117  Q
    |||||||||||||| |||||||| |||    ||||||||| ||||||||||| ||||||| |||||| || |||||||| ||||||| || |||||||||    
T  47443927 ttggtaaagttgttctcatgtgaccgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaataca 47444026  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  47444027 ccaaatggt 47444035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 49938746 - 49938671
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg 104  Q
    ||||||||||||| ||||  ||||||||||  ||||||||||| ||||||| ||||||||||||||| | ||||||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacggggtaagg 49938671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 23580365 - 23580299
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||| ||||  ||||||||||| |||||||| ||||||| || ||||||||||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaa 23580299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 54175043 - 54175137
Alignment:
Q  30 aagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaa-cagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    |||||||||||||||||  |||| ||||||  |||||||||| |||| ||| ||||||||||||||||| ||||||| || ||||||||| ||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaa 54175137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 14983809 - 14983878
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||| |||| | |||||||||  |||||||| | ||||||| ||||||||||||||    
T  14983809 tggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaa 14983878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 55766633 - 55766532
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcac-gagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaata 115  Q
    |||||| |||||||||||||||||||||| || |||||||| | ||||||||  | |||||||| ||||||||  |||||| ||||||| || |||||||    
T  55766633 acgcaactggtaaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgtgtaaacagggtaaggctgcgtacaata 55766534  T
Q  116 ca 117  Q
    ||    
T  55766533 ca 55766532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 487294 - 487230
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta 90  Q
    |||||||||||||||||||||  ||||||||||| ||||||||| | ||||||  ||||||||||    
T  487294 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta 487230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 37494821 - 37494929
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaagg-cgcatacaataca 117  Q
    |||| |||||||||||||| |||| ||  ||||||||||  ||||||||||| ||||||  ||||||||| |||||||| ||||||  |||||||||| |    
T  37494821 gcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggttgcatacaatata 37494920  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  37494921 ccaaatggt 37494929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 9832468 - 9832370
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    |||| ||||||| || |||  ||||||||||| |||||||||||  |||||| ||||||||| ||||||| ||||||| || ||||||||| ||||||||    
T  9832468 taaaattgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggt 9832370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 10660373 - 10660448
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  ||||||| ||  ||||||||||| ||||||  ||||| ||||||||    
T  10660373 cgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaa 10660448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 10874518 - 10874593
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  ||||||| ||  ||||||||||| ||||||  ||||| ||||||||    
T  10874518 cgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaa 10874593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 19027823 - 19027926
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||| ||||||||||| ||||  ||||||||||| ||||||||||| ||||||   |||||||| |||||||| ||||||| || ||||||||| |||     
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaat 19027922  T
Q  123 tggt 126  Q
    ||||    
T  19027923 tggt 19027926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 25343162 - 25343261
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||||||| ||||  || |||||||  |||||||| || |||| |||||||||||| |||||||| ||||||| || ||||||||| ||||    
T  25343162 tggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 25343261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 50856395 - 50856344
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaac 77  Q
    ||||||||||||||||  |||| ||||||||||| |||||||||||||||||    
T  50856395 ggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 5313154 - 5313108
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcct 71  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  5313154 tggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcct 5313108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 23501762 - 23501812
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtc 69  Q
    ||||| ||||||||||||||||||||||  ||||||||||| |||||||||    
T  23501762 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 23501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 25463108 - 25463166
Alignment:
Q  36 ttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||  ||||||||||| ||||||||||| ||||||  ||||||||||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 25463166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 30690340 - 30690274
Alignment:
Q  28 taaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| ||||||| ||||  ||||||||||| ||||||||||| |||| || ||||||||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaa 30690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 32629418 - 32629348
Alignment:
Q  35 gttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    ||||||||||||  ||||||||||| |||||| |||| ||||||| |||||||  |||||||| |||||||    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgtaaaaaaacagggtaaggc 32629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 7385628 - 7385567
Alignment:
Q  33 ttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||  ||||||||||| ||||||| ||| ||||||| ||| ||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaa 7385567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 43035224 - 43035289
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaa 91  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||  ||||||  |||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaa 43035289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 35567146 - 35567214
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||| |  ||||||||| | ||||||||| | ||||||| | ||||||||||||    
T  35567146 ggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaa 35567214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 41018945 - 41018885
Alignment:
Q  33 ttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||||||| ||||  ||||||||||| ||||||||||| ||||||  |||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 41018885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 54640498 - 54640430
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| ||||||||| |||   ||||||||||| ||||||||| | ||||||| ||||||||||||||    
T  54640498 ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaa 54640430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 54966997 - 54967065
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||||  |||||||| || |||| |  ||||||||||||||    
T  54966997 ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaa 54967065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 7909397 - 7909338
Alignment:
Q  68 tcctagaaacagtctcttgtgtaaaaacagagtaagg-cgcatacaatacatcaaatggt 126  Q
    |||| ||||||||||||||||||||||||| ||||||  || ||||||||| ||||||||    
T  7909397 tcctggaaacagtctcttgtgtaaaaacagggtaaggttgcgtacaatacaccaaatggt 7909338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 44357195 - 44357274
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaa-aaacagagtaag 103  Q
    |||||||||| |||| |||| |  ||||||||| ||||||||||||||||||||  || |||||||| ||| ||||||||    
T  44357195 tggtaaagttattgttatgtaactgaaaggtcatgagttcaagtcctagaaacaaccttttgtgtaataaatagagtaag 44357274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 3580994 - 3580952
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtc 69  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  3580994 gtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtc 3580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 29208032 - 29207955
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||| ||||||||||| ||||  | ||||||||| ||||||| ||||||| || ||||||||| ||||||||    
T  29208032 gaaaggtcacgggttcaagtcctggaaattgcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggt 29207955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 32632722 - 32632614
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| |||||||||||||||||| |||  ||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||| || |||||||||    
T  32632722 cgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaataca 32632623  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  32632622 ccaaatggt 32632614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 34725262 - 34725155
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||| || |||||||||    
T  34725262 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaataca 34725164  T
Q  118 tcaaatggt 126  Q
      |||||||    
T  34725163 ctaaatggt 34725155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 38478438 - 38478339
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatgg 125  Q
    ||||| ||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||| || ||||||||| |||||||    
T  38478438 gtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatgg 38478340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 47214503 - 47214610
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg-cgcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||||| | ||||||| ||||||  || |||||||||    
T  47214503 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgt-ttaaaacagggtaaggttgcgtacaataca 47214601  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  47214602 ccaaatggt 47214610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 14617037 - 14617103
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaa 92  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||||    
T  14617037 ggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaa 14617103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 22930233 - 22930148
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg 104  Q
    ||||| ||||||||||||||||||||||  ||||||||| | ||||||||||| ||||||| || |||||||||||||| ||||||    
T  22930233 cgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacagggtaagg 22930148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 41319966 - 41319865
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||||||||||||  ||||||||||  ||| ||||||| |||||||||||||||||| ||||||| ||||||| || ||||||||| ||||    
T  41319966 tggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 41319867  T
Q  123 tg 124  Q
    ||    
T  41319866 tg 41319865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 18724704 - 18724636
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  18724704 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 18724636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 27474279 - 27474351
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacag 97  Q
    ||||||||||||||||||||||  ||||||||||  ||||||||| | |||||||||||||||||||||||||    
T  27474279 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacag 27474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 45812701 - 45812594
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| || |||||||||||||||||||  ||||||||||  |||||||||||  |||||||||||||||| |||| || ||||||| ||||||||||||    
T  45812701 cgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgt-aaaagagggtaaggctgcatacaataca 45812603  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  45812602 ccaaatggt 45812594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 23768487 - 23768377
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaata 115  Q
    |||||| ||||||||||||||||||||||  | ||||||||  ||||||||| | ||||||| |||||||||| ||||||| ||||||| || |||||||    
T  23768487 acgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaata 23768388  T
Q  116 catcaaatggt 126  Q
    || ||||||||    
T  23768387 caccaaatggt 23768377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 45402087 - 45402164
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacag 97  Q
    ||||| ||||||||||||||||||||||| ||| ||| ||| ||||||||||| ||||||| |||||||||||||||||    
T  45402087 cgcaactggtaaagttgttgtcatgtgatggaa-ggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 45402164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 11596512 - 11596613
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatg 124  Q
    |||||||| | ||||||||||  |||| |||||| ||||||||||||||||||  ||||||||||||||||| ||||||| || || |||||| ||||||    
T  11596512 ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacagggtaaggctgcgtataatacaccaaatg 11596611  T
Q  125 gt 126  Q
    ||    
T  11596612 gt 11596613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 19414434 - 19414538
Alignment:
Q  22 aattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatca 120  Q
    ||||||||||||||||||||| |||  ||||||||||| |||||||||||||||| || ||||| ||| |||||||  |||||| || ||||||||| ||    
T  19414434 aattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgt-aaaacaggttaaggctgcgtacaatacacca 19414532  T
Q  121 aatggt 126  Q
    ||||||    
T  19414533 aatggt 19414538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 25468421 - 25468320
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa-cagagtaagg-cgcatacaatacatcaaatg 124  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||| ||||||  |||||||||||||| ||| ||||||  || ||||||||| ||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaatg 25468322  T
Q  125 gt 126  Q
    ||    
T  25468321 gt 25468320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 18944635 - 18944735
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  ||||||||||  ||||||| ||| ||||||| ||||||||| |||||||| ||||||| || ||||||||    
T  18944635 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 18944734  T
Q  117 a 117  Q
    |    
T  18944735 a 18944735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 30395894 - 30395794
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||    ||||||||| ||||||||||| ||||||| |||||||||| ||||||| ||||||| || ||||||||    
T  30395894 cgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 30395795  T
Q  117 a 117  Q
    |    
T  30395794 a 30395794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 20036218 - 20036285
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaa 92  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||  ||||||||||||    
T  20036218 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaa 20036285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 27201645 - 27201744
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||||||||||||  ||||||||| | ||||||||||| ||||||| ||||||||| | |||||| ||||||| || ||||||||| ||||    
T  27201645 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaa 27201744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 34714615 - 34714678
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtct 82  Q
    ||||| ||||||||||||||||||||||| ||||||||||| ||||||||| | ||||||||||    
T  34714615 cgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaacagtct 34714678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 46248113 - 46248010
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||||||||||||  |||| |||||| ||||||||| | ||||||| |||||||||| ||||||| ||||| | || ||||||||| ||||    
T  46248113 tggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 46248014  T
Q  123 tggt 126  Q
    ||||    
T  46248013 tggt 46248010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 17470505 - 17470407
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    |||||||||||||||| ||||  ||| ||||| | ||||||||||||||||||| |||||||||| ||||||| ||||||| || ||||||||| ||||    
T  17470505 ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaa 17470407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 20004257 - 20004183
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| |||| |||||||||    
T  20004257 gcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaa 20004183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 46991797 - 46991871
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||  ||||||||||||||    
T  46991797 gcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 46991871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 6925098 - 6925167
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||| |||| || ||||||||||||||    
T  6925098 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaa 6925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 10668212 - 10668292
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatc-----gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| |||||||||||||||||||||||      ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  10668212 cgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 10668292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 35117927 - 35117847
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc 105  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||| |||| || ||||||||||||| |||| |||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggc 35117847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 33222983 - 33223054
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacag 97  Q
    |||||||||||||||||||||  |||||||||||  || ||||| | ||||||| |||||||||||||||||    
T  33222983 ggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacag 33223054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 9939463 - 9939521
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgt 87  Q
    ||||||||||||||||||  ||||||||||||||||||||||| ||||||  |||||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgt 9939521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 12126993 - 12126897
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||||||||||| || ||||||||||| ||| |||| || |||||||  |||||||| ||||||| ||||||| || ||||||||| |||||    
T  12126993 gtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaat 12126897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 22327101 - 22327166
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||  |||||||| || ||||||||||| ||||||  ||||||||||||||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaa 22327166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 44485267 - 44485166
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc-gcatacaatacatcaaatg 124  Q
    ||||||||||||||||||||| ||||||||||| |||  |||||| ||||||  | ||||||||||| |||  ||||||| || ||||||||| ||||||    
T  44485267 gtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaaggctgcgtacaatacaccaaatg 44485168  T
Q  125 gt 126  Q
    ||    
T  44485167 gt 44485166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 2435946 - 2435878
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||| ||||||| ||| ||||| ||||    
T  2435946 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaa 2435878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 2436052 - 2435984
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||| ||||||  ||| ||||||||||    
T  2436052 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaa 2435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 4430186 - 4430083
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||||||||||||||  | ||||||||| ||| ||||| |  ||||||| ||||||||| ||||||| ||||| | || ||||||||| ||||    
T  4430186 tggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaa 4430087  T
Q  123 tggt 126  Q
    ||||    
T  4430086 tggt 4430083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 18335454 - 18335379
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| || ||||||| ||||||||||   |||||||||| |||| ||||||| ||||||||||||||| ||||||    
T  18335454 cgcaagtgataaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaacagtctcttgtttaaaaa 18335379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 25290162 - 25290232
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaa--acagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||||| ||||||||| | |||  |||| ||||||||||||||    
T  25290162 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaa 25290232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 8197036 - 8197110
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| |||| |||||||||||||||||  ||||||||||| ||||||||||| | ||  | ||||||||||||||    
T  8197036 gcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaa 8197110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22324927 - 22324989
Alignment:
Q  61 gttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||| | ||||||| ||||||||||||||||| ||||||| |||||||||||| ||||    
T  22324927 gttcaagtcttggaaacagcctcttgtgtaaaaacagggtaaggctgcatacaatacaccaaa 22324989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 35253321 - 35253244
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||| ||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||| || ||||||||| ||||||||    
T  35253321 gaaagatcacgggttcaagtcctcgaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggt 35253244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 27136811 - 27136743
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| ||||| | |||| ||||||||||||| || | ||||  ||||||||||||||    
T  27136811 ggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaa 27136743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 40424734 - 40424786
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcct 71  Q
    ||||| ||||||||||||||||||||||  |||||| |||| |||||||||||    
T  40424734 cgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 50760385 - 50760321
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta 90  Q
    |||||||| ||||||||||||  || |||||||| |||||||||||  |||||| ||||||||||    
T  50760385 ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgta 50760321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 35005145 - 35005220
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||||| ||||||||| |  |||||| ||||||||| |||||||| ||||||| |||||||||||| ||||    
T  35005145 gaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaa 35005220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 6983969 - 6983915
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacag 79  Q
    ||||||||||||||||| ||||  ||||||||||  ||||||||||| |||||||    
T  6983969 tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacag 6983915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 31272510 - 31272432
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||  ||||||||||| ||||||  ||||||||||||||||  ||||||| || ||||  ||||||||||||    
T  31272510 gaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacatggtaaggctgcgtacagcacatcaaatggt 31272432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 19932918 - 19932869
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagt 68  Q
    ||||| ||||||||||||||||||||||  ||||||||| | ||||||||    
T  19932918 cgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 23371146 - 23371191
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||| ||||||||||||||||||| | |||| |||||||    
T  23371146 gaaaggtcacgggttcaagtcctagaaacagccacttgggtaaaaa 23371191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 18742127 - 18742051
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcct-agaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  ||||||||| | |||||| || |  |||||||||| |||| ||||||    
T  18742127 cgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaa 18742051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 50811938 - 50812006
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| ||||  |||||||||||   ||| ||||| |||||||  |||||||||||||    
T  50811938 ggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaa 50812006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 52910216 - 52910284
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||||  |||||| || | ||||||| |||||  |||||||    
T  52910216 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctcttaggtaaaaa 52910284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 226572 - 226462
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt--aaaaacagagtaaggc-gcatacaata 115  Q
    ||||| ||||||||||||||||||||||  |||||||||||  |||||||||||||||||| ||||||| |  |||||||| ||||||| ||||||||||    
T  226572 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgcatacaata 226473  T
Q  116 catcaaatggt 126  Q
    |||||||||||    
T  226472 catcaaatggt 226462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 10870117 - 10870031
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||    
T  10870117 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggc 10870031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 12914201 - 12914087
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||| |||||||||| ||||||| ||||||| || ||||||||    
T  12914201 cgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgtacaatac 12914102  T
Q  117 atcaaatggtaagac 131  Q
    | |||||||| ||||    
T  12914101 accaaatggtgagac 12914087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 26869698 - 26869806
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||  ||||||||||| ||||||| |||| |||||||||||| ||||||| || |||||||||    
T  26869698 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacagggtaaggctgcgtacaataca 26869797  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  26869798 ccaaatggt 26869806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 7697051 - 7696945
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||   |||||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||| || |||||||||    
T  7697051 cgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt-aaaacagggtaaggctgcgtacaataca 7696953  T
Q  118 tcaaatgg 125  Q
     |||||||    
T  7696952 ccaaatgg 7696945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 8247855 - 8247780
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  8247855 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 8247780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 22123075 - 22122974
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||| ||||||||||||||  |||||||| || ||||||||||| ||||||||||||||||| ||||||| ||||||| || ||||||||| |||||    
T  22123075 tggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaat 22122977  T
Q  124 ggt 126  Q
    |||    
T  22122976 ggt 22122974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 22609764 - 22609865
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatg 124  Q
    |||||||||||||||||||||  | ||||| ||| ||||||||| | ||||||| ||||||||||||||||| ||||||| || ||||||||| ||||||    
T  22609764 ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatg 22609863  T
Q  125 gt 126  Q
    ||    
T  22609864 gt 22609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 16735432 - 16735540
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  | || |||||| ||||||||||| ||||||| |||||||  |||||||| ||||||| || |||||||||    
T  16735432 cgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacagggtaaggctgcgtacaataca 16735531  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  16735532 ccaaatggt 16735540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 26782356 - 26782432
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||| |||||||| ||| |||||||||||  |||||||||| |||||| |||||||||||||||    
T  26782356 acgcaattggtaaagttattgtcatgcgattgaaaggtcacggattcaagtccttgaaacaatctcttgtgtaaaaa 26782432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 46421203 - 46421103
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||   |||||||||| ||||||||||| ||||||| |||||||||| ||||||| ||||||| || ||||||||    
T  46421203 cgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 46421104  T
Q  117 a 117  Q
    |    
T  46421103 a 46421103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 1217081 - 1217187
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| |||||||||||| ||||||| |  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||| || |||||||||    
T  1217081 cgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaataca 1217179  T
Q  118 tcaaatgg 125  Q
     |||||||    
T  1217180 ccaaatgg 1217187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 5173876 - 5173801
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg 104  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| ||||||  |||||||||||||||| |||||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagtaagg 5173801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 13730770 - 13730695
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  13730770 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 13730695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 13628948 - 13628858
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaa-aaacagagtaaggc-gcatacaataca 117  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||| |||||| ||||||| || |||||||||    
T  13628948 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaataca 13628858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 40272978 - 40272869
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  | ||||||| | ||||||||||| ||||||  |||||||||| ||||||| ||||||| || ||||||||    
T  40272978 cgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatac 40272879  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  40272878 accaaatggt 40272869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 39203515 - 39203614
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg-cgcatacaatacatcaaatgg 125  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||| ||||||| ||||||||| ||||||| ||||||  || ||||||||| |||||||    
T  39203515 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgt-aaaacagggtaaggttgcgtacaatacaccaaatgg 39203613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 6411988 - 6411881
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatac 116  Q
    |||||| |||||||||||||||||||| |  || |||||| | ||||||||| |  |||||| ||||||||||||||||| ||||||| || ||||||||    
T  6411988 acgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatac 6411889  T
Q  117 atcaaatg 124  Q
    | ||||||    
T  6411888 accaaatg 6411881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 34420802 - 34420735
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||| ||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  34420802 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 34420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 52926376 - 52926305
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta 90  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||||    
T  52926376 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 26573125 - 26573227
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||| ||||||| ||| ||||| |||||||| ||||||| || ||||||||| ||| |    
T  26573125 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaatt 26573224  T
Q  124 ggt 126  Q
    |||    
T  26573225 ggt 26573227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 29366882 - 29366788
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaataca 117  Q
    ||||||||||||||||||||||   |||||||||| ||||||||||| ||||||| ||||||| | |||||||| ||||||| || |||||||||    
T  29366882 tggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgtacaataca 29366788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 4495830 - 4495721
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  | ||||||||| |||||||||||  ||| || || ||||||| ||||||| ||||||| || ||||||||    
T  4495830 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgtacaatac 4495731  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  4495730 accaaatggt 4495721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 30928302 - 30928238
Alignment:
Q  30 aagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| |||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 30928238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 35417914 - 35417982
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||| ||||||||  || ||||||||||||||| |||| ||||||| ||||||||||||||    
T  35417914 ggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaa 35417982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 45620988 - 45620920
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| ||||  ||||||||||| |||||||| || ||||||| ||||||||||||||    
T  45620988 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaa 45620920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 53062036 - 53062104
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||| ||||| ||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaa 53062104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 516417 - 516475
Alignment:
Q  36 ttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 516475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 9607202 - 9607269
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||  |||||||||   ||||||||||| ||||||| |||||| |||||||    
T  9607202 gtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaa 9607269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 21796937 - 21796831
Alignment:
Q  22 aattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggcgc-atacaatacatca 120  Q
    ||||||||||||||||||||  |||  ||| ||||||  |||||| | ||| ||||||||||||||||||||| || ||||| | |  ||||| ||||||    
T  21796937 aattggtaaagttgttgtcacatgagggaatggtcacatgttcaaatactataaacagtctcttgtgtaaaaatagggtaagactctgtacaaaacatca 21796838  T
Q  121 aatggta 127  Q
    |||||||    
T  21796837 aatggta 21796831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 33926094 - 33926160
Alignment:
Q  39 tcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    ||||||||  ||||||||| | ||||||||||| |||| || ||||||||||||||||| |||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacagggtaaggc 33926160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 53996725 - 53996627
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaa 122  Q
    |||||| |||||||||| |||  ||||||||||| ||||||||| | ||||||  |||||||||| ||||||| ||||||| || ||||||||| ||||    
T  53996725 ggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgcttacaatacaccaaa 53996627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 7942993 - 7943090
Alignment:
Q  31 agttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||||||||  | |||||||||  |||||||||| |||||||  |||||| | |||||||| ||||| | || ||||||||||||||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaatacatcaaatggt 7943090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 54032693 - 54032616
Alignment:
Q  51 aaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||| ||||||||||| ||||||  |||||||||| ||||||| ||||||| |||||||||||| | ||||||    
T  54032693 aaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccgaatggt 54032616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 19731000 - 19731068
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| ||||||||| ||||| |||||||||||  | |||||||| |||| || ||||||||||||||    
T  19731000 ggtaaatttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaa 19731068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 48667156 - 48667196
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaa 66  Q
    |||||||||||||| ||||||| ||||||||||||||||||    
T  48667156 ggtaaagttgttgtgatgtgatggaaaggtcacgagttcaa 48667196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 25944468 - 25944535
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||| ||||  ||||||||| | ||||||||||| ||||| | |||| |||||||||    
T  25944468 gtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaa 25944535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 31542411 - 31542457
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtccta 72  Q
    ||||||||||||||||| |||| |||||||||||| ||||| |||||    
T  31542411 ggtaaagttgttgtcatatgattgaaaggtcacgaattcaaatccta 31542457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 31592882 - 31592947
Alignment:
Q  61 gttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||| ||||||| ||||||||| ||||||| ||||||| || ||||||||| ||||||||    
T  31592882 gttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggt 31592947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 45139624 - 45139539
Alignment:
Q  39 tcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc-gcatacaatacatcaaa 122  Q
    ||||||||  ||||||||||| ||||||||  | ||||||  ||||||||||||| |||| ||||||| |||||||||||| ||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaa 45139539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 47624088 - 47624141
Alignment:
Q  74 aaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    |||||| ||||||||||||||||| ||||||| || ||||||||| ||||||||    
T  47624088 aaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggt 47624141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 10795554 - 10795486
Alignment:
Q  56 cacgagttcaagtcctagaaacagtctcttgtgtaaaa-acagagtaaggc-gcatacaatacatcaaa 122  Q
    |||| ||||||||||| ||||||| ||||||||||||| |||| ||||||| || ||||||||| ||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaa 10795486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 19751576 - 19751644
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| || |||||| ||||| |||||||||||  | |||||||| |||| || ||||||||||||||    
T  19751576 ggtaaattttttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaa 19751644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 19427055 - 19426980
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  19427055 cgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 19426980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 47078019 - 47077945
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||    
T  47078019 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 47077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 40463853 - 40463954
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatg 124  Q
    |||||||||||||||||||||  | ||||||||| ||||||||| ||||||||||||||||||||||||| | ||||||| || || |||||| ||||||    
T  40463853 ggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaactgggtaaggctgcgtataatacaccaaatg 40463952  T
Q  125 gt 126  Q
    ||    
T  40463953 gt 40463954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 21172173 - 21172066
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| |||||||||||||||||||| |  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||| || |||||||||    
T  21172173 cgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgcgtacaataca 21172075  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  21172074 ccaaatggt 21172066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 43557441 - 43557541
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  ||||||||| | ||||||||||| ||||||| ||||||||| |||||||||||||||| || ||||||||    
T  43557441 cgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgtacaatac 43557540  T
Q  117 a 117  Q
    |    
T  43557541 a 43557541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 27629603 - 27629678
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| |||||||||||||||||| ||| |||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  27629603 cgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 27629678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 2541186 - 2541076
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtga-tcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaata 115  Q
    ||||| |||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||| |||||||||| ||||||| ||||||| || ||| |||    
T  2541186 cgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtactata 2541087  T
Q  116 catcaaatggt 126  Q
    || ||||||||    
T  2541086 caccaaatggt 2541076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 33872069 - 33871967
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||||||||||||||||||  |||||||| || ||||||||||| ||||||  |||||||||||||||||  |||||| || ||||||||| |||||    
T  33872069 tggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacaggataaggctgcgtacaatacaccaaat 33871970  T
Q  124 ggt 126  Q
    |||    
T  33871969 ggt 33871967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 42496001 - 42495916
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg 104  Q
    ||||| |||||||||||||||||| |||  ||||||||||| ||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  42496001 cgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaacagggtaagg 42495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 42798638 - 42798747
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||||| | ||||||||||||||||| |||||||  ||||||| || ||||||||    
T  42798638 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgtacaatac 42798737  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  42798738 accaaatggt 42798747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 10693229 - 10693130
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatgg 125  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||| |||| || ||||||| || ||||||||| |||||||    
T  10693229 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaagagggtaaggctgcgtacaatacaccaaatgg 10693131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 32758230 - 32758337
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||  ||||||||||| ||||||| ||||||||| ||||||| ||||||| |  |||||||||    
T  32758230 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaacagggtaaggctgtgtacaataca 32758328  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  32758329 ccaaatggt 32758337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 34626373 - 34626265
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||| |||||| |||   |||||||||| ||||||| ||| ||||||||||||| ||||||| || | |||||||    
T  34626373 cgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacagggtaaggctgcgttcaataca 34626274  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  34626273 ccaaatggt 34626265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 39123865 - 39123937
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacag 97  Q
    ||||||||||||||||||||||  |||| | |||| ||||||||||||||||| |||||||||||||||||||    
T  39123865 tggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaacag 39123937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 46354163 - 46354263
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||  ||||||||| |||||||| ||||||| || ||||||||    
T  46354163 cgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgtacaatac 46354262  T
Q  117 a 117  Q
    |    
T  46354263 a 46354263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 18327003 - 18327089
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    ||||| ||||||||||||||||||||||    ||||||||| ||||||||||  ||||||| ||||||||||||||||| |||||||    
T  18327003 cgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaacagggtaaggc 18327089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 11617754 - 11617645
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  ||||||||||  ||||||||||| ||||||  |||||||||| ||||||| ||||| | || ||||||||    
T  11617754 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaatac 11617655  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  11617654 accaaatggt 11617645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 28078286 - 28078189
Alignment:
Q  30 aagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaagg-cgcatacaatacatcaaatggt 126  Q
    |||||||||||||||||  | ||||||||| ||||||||||||||||||||||| |||  |||||||| ||||||  |||| ||||||| ||||||||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctcgtgtaaaaaaacagggtaaggttgcatgcaatacaccaaatggt 28078189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 42805499 - 42805568
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  42805499 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 42805568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 22699137 - 22699061
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||| ||||||||||||||||||||||  ||||||| | | ||||||||||| |||| |||||||||||||||||    
T  22699137 acgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaa 22699061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 35334980 - 35334916
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctc 83  Q
    ||||| ||||||||||||||||||||||  | ||||||||||||||||||||| |||||||||||    
T  35334980 cgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctc 35334916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 29907393 - 29907463
Alignment:
Q  26 ggtaaagttgttgt--catgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||  |||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa 29907463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 42391251 - 42391157
Alignment:
Q  32 gttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    |||||||||||||||  ||||||||||| ||||||||||| |||||||  |||||||| ||||||| ||||||| || ||||||||| ||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgt-aaaacagggtaaggctgcgtacaatacaccaaatggt 42391157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 42476848 - 42476949
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    ||||||||||||||||||||||   ||||||||||  ||||||| || ||||||||||||||||| ||||||  ||||||| || ||||||||| |||||    
T  42476848 tggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgt-aaaacaaggtaaggctgcgtacaatacaccaaat 42476946  T
Q  124 ggt 126  Q
    |||    
T  42476947 ggt 42476949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 7193062 - 7193127
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaa 92  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||| ||||||  ||||||||||||    
T  7193062 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 19265791 - 19265892
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatg 124  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||| | || |||| | |||||||||||| || ||||||| || ||||||||| ||||||    
T  19265791 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaagagggtaaggctgcgtacaatacaccaaatg 19265890  T
Q  125 gt 126  Q
    ||    
T  19265891 gt 19265892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 48735287 - 48735179
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcc-tagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  ||||||||||| |||||||||| | ||||||  ||||||||| ||||||  ||||||| || ||||||||    
T  48735287 cgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgt-aaaacacggtaaggctgcgtacaatac 48735189  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  48735188 accaaatggt 48735179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 3469338 - 3469270
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||||    |||||||||||||||| |||||||||||||||    
T  3469338 ggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaa 3469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 6736867 - 6736967
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatgg 125  Q
    ||||||||||||||||| ||  ||||||||||| |||||||||||  |||||  ||||||| ||||||||  ||||| | |||||||||||| |||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaacaaggtaagactgcatacaatacaccaaatgg 6736966  T
Q  126 t 126  Q
    |    
T  6736967 t 6736967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 16341254 - 16341322
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||| ||||||  | ||||||||||| |||||||| |||||||||| ||||||||||||||    
T  16341254 ggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaa 16341322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 28362304 - 28362236
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||   ||||||||||  ||||||||||||||||| | ||||||||||||||    
T  28362304 ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaa 28362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 7794672 - 7794597
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||| ||||||  | ||||||||| ||||||||||| ||||||| ||||| ||||||||    
T  7794672 cgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaa 7794597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 5180324 - 5180238
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaag 103  Q
    |||||| ||||||||||||||||||||||  ||||||||| | |||||| | || ||||||| ||||||||| |||||||| |||||    
T  5180324 acgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaag 5180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 15108527 - 15108457
Alignment:
Q  54 gtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||||||||||| |||||||| |||||||||||||||  ||||||| |  |||||||||||||||    
T  15108527 gtcacgagttcaagtcctggaaacagtttcttgtgtaaaaacaaggtaaggctgtgtacaatacatcaaat 15108457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 31591243 - 31591166
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||| || |||||||||  |||||||    
T  31591243 gaaaggtcacgagttcaagtcctggaaacaacctcttgtgt-aaaacagagtaaggctgcgtacaatacaataaatggt 31591166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 47716438 - 47716528
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaataca 117  Q
    |||||||||| |||||||  | ||||||||| ||||||||||| ||||||| ||||||||| |||||||| ||||||| || |||||||||    
T  47716438 aaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaataca 47716528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 48123643 - 48123541
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaa-aacagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||||| |||||||   ||||||||| | ||||||||||| ||||||| |||||||||||| ||||| ||||  | |||||||||||| |||||    
T  48123643 ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcatacaatacaccaaat 48123544  T
Q  124 ggt 126  Q
    |||    
T  48123543 ggt 48123541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 7644931 - 7645000
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||| ||||||| | ||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  7644931 tggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 7645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 13805077 - 13805145
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||||||||||||||||||||  ||||||| ||| ||||||||||| |||| || |||| ||||||||    
T  13805077 tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaa 13805145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 1424076 - 1424001
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||| ||||||||||||||| ||||||  | |||||||||  ||||| |||| |||||||||| |||||||||||    
T  1424076 cgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtctgttgtgtaaaaa 1424001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 22065563 - 22065654
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaata 115  Q
    ||||||||||||||||| ||||| |||| |||| ||||||||||  | ||||||  |||||||||||||| || |||| || ||||||||||    
T  22065563 tggtaaagttgttgtcacgtgattgaaaagtcatgagttcaagttttggaaacaacctcttgtgtaaaaatagggtaaagctgcatacaata 22065654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 38262330 - 38262287
Alignment:
Q  51 aaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  38262330 aaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaa 38262287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 23419833 - 23419731
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgta-aaaacagagtaaggc-gcatacaatacatcaaat 123  Q
    |||||||||| ||||||||||   |||||||||  |||||||| || ||||||| |||||||||| ||||||| ||||| | || ||||||||| |||||    
T  23419833 ggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaat 23419734  T
Q  124 ggt 126  Q
    |||    
T  23419733 ggt 23419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 35203433 - 35203483
Alignment:
Q  44 tgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| ||||||||||| ||||||||||| |||||| |||||||||||||||    
T  35203433 tgattgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaa 35203483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 44123780 - 44123710
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaaca 96  Q
    |||||||||| ||||||||||  ||||| | ||| |||||||| || ||||||| ||||||||||||||||    
T  44123780 ggtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaaca 44123710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 7879639 - 7879716
Alignment:
Q  51 aaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||| ||||||||||| |||||| |||||||||| |||||||  ||||||| || ||||||||| ||||||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaaatggt 7879716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 14099165 - 14099097
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||| | ||| ||||||| |||| || || |||||||||||    
T  14099165 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaa 14099097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 14409182 - 14409114
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||||||||  ||||||||| | ||| ||||||| |||| || || |||||||||||    
T  14409182 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaa 14409114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 14732988 - 14732928
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacag 79  Q
    ||||| ||||||||||||||||||||||  |||| |||| | ||||||||||| |||||||    
T  14732988 cgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacag 14732928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 32233270 - 32233214
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc 105  Q
    ||||||||| | ||||||||||| ||||||  ||||||||||||||||| |||||||    
T  32233270 gaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaacagggtaaggc 32233214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 38604550 - 38604609
Alignment:
Q  73 gaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggtaagac 131  Q
    ||||||| ||||||||||||||||| ||||||| || ||||||||| |||||||| ||||    
T  38604550 gaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaatggtgagac 38604609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 11741774 - 11741871
Alignment:
Q  29 aaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||||||||||  ||||||||| | |||||||||||  ||||||  ||| |||| |||| || ||||||| || ||||||||| ||||||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgt-aaaatagggtaaggctgcgtacaatacaccaaatggt 11741871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 18512588 - 18512510
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatggt 126  Q
    ||||||||||| ||||||||||| ||||||   ||||||||||||| || ||||||| || ||||||||| | ||||||    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacaccgaatggt 18512510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 8491918 - 8491963
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||| |||||||||| || |||||||||||||| ||||||    
T  8491918 gaaaggtcacaagttcaagtcttaaaaacagtctcttgtttaaaaa 8491963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 8518727 - 8518772
Alignment:
Q  49 gaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||| |||||||||| || |||||||||||||| ||||||    
T  8518727 gaaaggtcacaagttcaagtcttaaaaacagtctcttgtttaaaaa 8518772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 12473280 - 12473359
Alignment:
Q  26 ggtaaagttgttgtcatgtgatc-gaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaagg 104  Q
    ||||||||||||||||||| ||| ||||||||| | |||||||||||  |||||  ||||||||| |||||||| ||||||    
T  12473280 ggtaaagttgttgtcatgt-atctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggtaagg 12473359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 42102044 - 42101976
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||||||||||||||| ||||  | |||||||  |||||||||||| ||||||| |||||  |||||||    
T  42102044 ggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaa 42101976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 10215 - 10110
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatac 116  Q
    |||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||| | || ||||||||    
T  10215 acgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagagtaagactgcgtacaatac 10117  T
Q  117 atcaaat 123  Q
    | |||||    
T  10116 accaaat 10110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 20543 - 20438
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatac 116  Q
    |||||| ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||| | || ||||||||    
T  20543 acgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacagagtaagactgcgtacaatac 20445  T
Q  117 atcaaat 123  Q
    | |||||    
T  20444 accaaat 20438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 30548 - 30655
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||||||||||||  ||||||||||  ||||||||||| ||||||| ||||||||| ||||||| ||| ||| || |||||||||    
T  30548 cgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgt-aaaacagggtagggctgcgtacaataca 30646  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  30647 ccaaatggt 30655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 1752 - 1646
Alignment:
Q  18 acgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatac 116  Q
    |||||||||||||||||||||||||||||  ||||||||| | |||||||||||  |||||  ||||||||| |||||||  |||||| |||||||||||    
T  1752 acgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgt-aaaacaggataaggctgcatacaatac 1654  T
Q  117 atcaaatg 124  Q
    | ||||||    
T  1653 accaaatg 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 13182 - 13081
Alignment:
Q  26 ggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaatacatcaaatg 124  Q
    |||||||||||||||||||||  ||||||||||  ||||||||||| ||||||| |||||| |||||||||  ||||||| || ||||||||| | ||||    
T  13182 ggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaacaaggtaaggctgcgtacaatacaccgaatg 13083  T
Q  125 gt 126  Q
    ||    
T  13082 gt 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 11101 - 11207
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacagagtaaggc-gcatacaataca 117  Q
    ||||| ||||||||||||| | ||||||  ||||||||||| ||||||||||| ||||||| ||||||||| |||||| |||||||| || |||||||||    
T  11101 cgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaacaaagtaaggctgcttacaataca 11198  T
Q  118 tcaaatggt 126  Q
     ||||||||    
T  11199 ccaaatggt 11207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 46800 - 46875
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    ||||||||||||||||||||||||||||    ||||||||| |||||||| || ||||||  ||||||||||||||    
T  46800 cgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaa 46875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 24933 - 24829
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgt-aaaaacagagtaaggc-gcatacaatac 116  Q
    ||||| ||||||||||||||||||||||  ||||||||| | |||||||||     ||||| ||||||||| |||||||| ||||||| || ||||| ||    
T  24933 cgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaacac 24839  T
Q  117 atcaaatggt 126  Q
    | ||||||||    
T  24838 accaaatggt 24829  T

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Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 47041 - 46997
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcct 71  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||    
T  47041 gtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtcct 46997  T

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Target: scaffold0254 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 4134 - 4200
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaa 93  Q
    ||||||||||||| ||||||  ||||||||||| ||||||||||| ||||||  |||||||||||||    
T  4134 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 4200  T

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Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 58947 - 59021
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| ||||||| || |||||||||||  ||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  58947 gcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 59021  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 35184 - 35074
Alignment:
Q  20 gcaattggtaaagttg-ttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctctt--gtgtaaaaacagagtaaggc-gcatacaata 115  Q
    |||| ||||||||||  |||||||||||  | ||||||||| |||||||||||  ||||||||||||  |||| ||||||| ||||||| || |||||||    
T  35184 gcaactggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggctgcgtacaata 35085  T
Q  116 catcaaatggt 126  Q
    || ||||||||    
T  35084 caccaaatggt 35074  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 73027 - 72923
Alignment:
Q  19 cgcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaac-agtctcttgtgt-aaaaacagagtaaggc-gcatacaata 115  Q
    ||||| |||||||||||||||||||||        |||||| ||||||||||||||||| |||||||||||| |||||||  ||||||| || |||||||    
T  73027 cgcaactggtaaagttgttgtcatgtgt-------gtcacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggtaaggctgcctacaata 72935  T
Q  116 catcaaatggta 127  Q
    || |||||||||    
T  72934 caccaaatggta 72923  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 8866 - 8938
Alignment:
Q  25 tggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaacag 97  Q
    ||||||||||||||||||||||  | ||||||||  |||||| |||| ||||||   ||||||||||||||||    
T  8866 tggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaaacag 8938  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 83852 - 83903
Alignment:
Q  27 gtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaaca 78  Q
    ||||||||||||||||||||  ||||||||||| ||||||||| | ||||||    
T  83852 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 83903  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 10780 - 10854
Alignment:
Q  20 gcaattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacagtctcttgtgtaaaaa 94  Q
    |||| ||||||||||||||||||||||  | ||||||||| |||||||  ||  |||||  ||||||||||||||    
T  10780 gcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaa 10854  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 24635 - 24693
Alignment:
Q  21 caattggtaaagttgttgtcatgtgatcgaaaggtcacgagttcaagtcctagaaacag 79  Q
    |||||| |||||||||||||| ||||  | ||||||||| ||||||||||| |||||||    
T  24635 caattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaacag 24693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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