View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1375_low_19 (Length: 306)
Name: NF1375_low_19
Description: NF1375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1375_low_19 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 4678409 - 4678688
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678409 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgttgcagctattgcatatggttttgacaagagaagtgaaagtgat |
4678508 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678509 |
tgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
4678608 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataat |
297 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678609 |
gaaacactcacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataat |
4678688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 34466645 - 34466923
Alignment:
| Q |
19 |
gatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatc |
118 |
Q |
| |
|
||||||||| | |||||||| |||||||| | ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||| || | |
|
|
| T |
34466645 |
gatgctggtactattgctggccttaatgttttgcaaataatcaatgaacccactgctgcagctattgcatatggacttgacaagagagctgactttg-tg |
34466743 |
T |
|
| Q |
119 |
gta-aacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
| | || ||||||| || |||||||||||||||||||| ||||||||||||||| |||||| ||| |||| | |||||||||||| || |||||| ||| |
|
|
| T |
34466744 |
gaagaaggaaatattttcgtctttgaccttggtggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctg |
34466843 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataat |
297 |
Q |
| |
|
| ||||| ||||| || |||||||||||||||| ||||||| |||| |||||| | |||||||||| | |||| ||||| |
|
|
| T |
34466844 |
gtaacactcacctcggacgagaggactttgataatagaatggcgaaccactttgcaaaggagttcaagaggaagcataat |
34466923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 73 - 271
Target Start/End: Complemental strand, 15595296 - 15595098
Alignment:
| Q |
73 |
gctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtcta |
172 |
Q |
| |
|
|||||||||||||||||||| |||||||||| | | | ||| | | || ||||||| ||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
15595296 |
gctgcagctattgcatatggccttgacaagaggattaactgtgttggagaaagaaatatttttgtctttgatcttggtggtggcacttttgatgtgtcta |
15595197 |
T |
|
| Q |
173 |
tccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttg |
271 |
Q |
| |
|
|||| | ||| |||| ||||| |||| || ||||| | |||||||| ||||| || |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
15595196 |
tcctaacaattaaggacaaggtcttccaagttaaggccacaggcggaaacactcaccttggaggagaggactttgataacagaatggtcaactactttg |
15595098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 31)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 25 - 296
Target Start/End: Complemental strand, 8659673 - 8659402
Alignment:
| Q |
25 |
ggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaac |
124 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |
|
|
| T |
8659673 |
ggtgccattgctggccttaatgtcattcagataattaatgaacctactgctgcagctattgcatatggttttgacaagagaggtgactgtgatggtaaac |
8659574 |
T |
|
| Q |
125 |
gaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacac |
224 |
Q |
| |
|
|||||| || |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
8659573 |
aaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacac |
8659474 |
T |
|
| Q |
225 |
ccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
296 |
Q |
| |
|
||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8659473 |
tcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
8659402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 13333307 - 13333585
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
|||||||||||| |||||||| |||||| |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||||| |
|
|
| T |
13333307 |
agatgctggtgctattgctggccttaatatcattcgaataatcaatgaacctactgctgcagctattgcatatggccttgacaagagacgtgattgtgat |
13333406 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||||| || | |
|
|
| T |
13333407 |
ggtaagcgaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagccaccgcag |
13333506 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
296 |
Q |
| |
|
||||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
13333507 |
gaaacactcaccttgggggagaagacttcgataacagaatggtgaactattttgttgaggagttcaaaaagaagaataa |
13333585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 19 - 296
Target Start/End: Original strand, 10494226 - 10494503
Alignment:
| Q |
19 |
gatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatc |
118 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
10494226 |
gatgctggtgctattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagg |
10494325 |
T |
|
| Q |
119 |
gtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctgg |
218 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||| || |
|
|
| T |
10494326 |
gtaaccgaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccactgcagg |
10494425 |
T |
|
| Q |
219 |
aaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
296 |
Q |
| |
|
||||| ||||| || ||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||| |
|
|
| T |
10494426 |
taacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataa |
10494503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 8654767 - 8654489
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||| ||||||||||||||||| |||||||| ||||| | |||| |
|
|
| T |
8654767 |
agatgctggtgccattgctggacttaacgtcattcggatactcaatgaacctactgccgcagctattgcatatggccttgacaagcgaagtaactatgat |
8654668 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
||||||| ||||| || || ||||| ||||||||||||||||||||||||||||| || | ||| ||||||| ||||||||| |||||||||||||||| |
|
|
| T |
8654667 |
ggtaaacggaatattttggtatttgatcttggtggtggtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgtaaaagccactgctg |
8654568 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
296 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8654567 |
gaaacacgcacctagggggagaagactttgataacagaatggtgtactactttgtagaggagttcaaaaagaagaataa |
8654489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 1301781 - 1301499
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaaccta----ctgctgcagctattgcatatggttttgacaagagaagtgaaag |
113 |
Q |
| |
|
|||||| ||||| |||||||| |||||||||||||| ||||| || ||||||| |||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
1301781 |
agatgccggtgcaattgctggccttaatgtcattcagataattaatgaacctagctactgctgcagctattgcgtatggttttgacaagagaagtgactg |
1301682 |
T |
|
| Q |
114 |
tgatcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccact |
213 |
Q |
| |
|
|||| ||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |
|
|
| T |
1301681 |
tgatggtaaacggaatattttggtctttgaccttggcggtggtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagccact |
1301582 |
T |
|
| Q |
214 |
gctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
296 |
Q |
| |
|
| |||||| || ||||| || ||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
1301581 |
ggtggaaatactcaccttggaggagaggactttgataatagaatggtgagctactttgtagaggagttcagaaagaagaataa |
1301499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 8667736 - 8667458
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||| ||||| |
|
|
| T |
8667736 |
agatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgcggcagctattgcatatggccttgacaagagaaatgactgtgat |
8667637 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
||| |||||||| ||||||||||| || ||||| || |||||||||||||||||||| | ||| ||||||| |||||||||||| ||||||||||| | |
|
|
| T |
8667636 |
ggtagccgaaatatttttgtctttgatctgggtggcgggacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgcag |
8667537 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
296 |
Q |
| |
|
||||||| ||||| || || |||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
8667536 |
gaaacactcaccttgggggcgaggacttcgataacagaatggtgaactattttgttgaggagttaaaaaagaagaataa |
8667458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 278
Target Start/End: Original strand, 8585558 - 8585817
Alignment:
| Q |
19 |
gatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatc |
118 |
Q |
| |
|
|||||||||||||||||||| |||||||| || |||||||| ||||| ||||||||||||||||||||||| ||||||| | | || | ||||| |
|
|
| T |
8585558 |
gatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctgcagctattgcatatggccttgacaacaaaggtaactgtgatg |
8585657 |
T |
|
| Q |
119 |
gtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctgg |
218 |
Q |
| |
|
|| |||||||||| ||||| ||||| ||||||||||| ||||||||||||||| |||| | ||| || |||| |||||||||||| ||||| || ||||| |
|
|
| T |
8585658 |
gtgaacgaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcaaccgctgg |
8585757 |
T |
|
| Q |
219 |
aaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagagga |
278 |
Q |
| |
|
||| || ||||| || |||| ||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
8585758 |
aaatactcaccttgggggaggggactttgataacagaatgttgaactactttgttgagga |
8585817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 258
Target Start/End: Complemental strand, 8628847 - 8628609
Alignment:
| Q |
20 |
atgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcg |
119 |
Q |
| |
|
||||||||||||||||||| |||||||| || |||||||| || || ||||||||||||||||||||||| ||||||| | | || ||||| | |
|
|
| T |
8628847 |
atgctggtgccattgctggccttaatgttatgaggataatcaatgaccccactgctgcagctattgcatatggccttgacaacaaaggtaggtgtgatgg |
8628748 |
T |
|
| Q |
120 |
taaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctgga |
219 |
Q |
| |
|
| |||||||||| ||||| ||||| ||||||||||| ||||||||||||||| |||| | ||| || |||| |||||||||||| ||||||||||||||| |
|
|
| T |
8628747 |
tgaacgaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgctgga |
8628648 |
T |
|
| Q |
220 |
aacacccacctaggtggagaggactttgataacagaatg |
258 |
Q |
| |
|
|| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
8628647 |
aatactcaccttggtggagaggactttgataacagaatg |
8628609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 25 - 293
Target Start/End: Original strand, 27830733 - 27831001
Alignment:
| Q |
25 |
ggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaac |
124 |
Q |
| |
|
|||||||||||||| |||||||| || | ||||| | ||| |||||||||||||||||||||||||| |||||| | ||| || | | | ||| |
|
|
| T |
27830733 |
ggtgccattgctggccttaatgttatgcggataataagcgagcctactgctgcagctattgcatatggccttgacacgggaacaaaatatactggagaac |
27830832 |
T |
|
| Q |
125 |
gaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacac |
224 |
Q |
| |
|
| ||||| ||||| ||||||||||||||||| ||||||||||||||| | ||| ||| |||| | ||||| |||| || || |||||||||||||| |
|
|
| T |
27830833 |
ggaatatttttgtgtttgaccttggtggtgggacttttgatgtgtctcttgttacaattaaggataaggtcttccaagttaaggcaactgctggaaacac |
27830932 |
T |
|
| Q |
225 |
ccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaa |
293 |
Q |
| |
|
||||| |||||||||||||||||||| || ||||||||||| ||||| |||| |||||| |||||||| |
|
|
| T |
27830933 |
tcaccttggtggagaggactttgataataggatggtgaactattttgtggaggtgttcaagaagaagaa |
27831001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 278
Target Start/End: Original strand, 8636193 - 8636454
Alignment:
| Q |
17 |
aagatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtga |
116 |
Q |
| |
|
||||||||||||||||||| || |||||||| |||| |||||||| ||||| |||||||||||| |||| ||||| || | |||||| || | ||| |
|
|
| T |
8636193 |
aagatgctggtgccattgccggccttaatgtaattcggataatcaatgaaccaactgctgcagcttttgcgtatggacttcaaaagagaggtaactgtgt |
8636292 |
T |
|
| Q |
117 |
tcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgct |
216 |
Q |
| |
|
| | |||| || || || ||||| |||||||||||||| || || |||||||| || ||||| || |||| ||||||||||| ||||||||||| |
|
|
| T |
8636293 |
taaagagagaaacattttcgtatttgatcttggtggtggtacattcgacgtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgcc |
8636392 |
T |
|
| Q |
217 |
ggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagagga |
278 |
Q |
| |
|
||| |||| ||||| || ||||||||||||||||||||||||||| | || ||||||||||| |
|
|
| T |
8636393 |
ggagacacacaccttggaggagaggactttgataacagaatggtggaatattttgtagagga |
8636454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 8671482 - 8671606
Alignment:
| Q |
19 |
gatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatc |
118 |
Q |
| |
|
||||||||| | |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
8671482 |
gatgctggtactattgctggacttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaaatgaccgtgaag |
8671581 |
T |
|
| Q |
119 |
gtaaacgaaatatatttgtctttga |
143 |
Q |
| |
|
|||| |||||||| ||||||||||| |
|
|
| T |
8671582 |
gtaaccgaaatatttttgtctttga |
8671606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 271
Target Start/End: Complemental strand, 8647194 - 8646941
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
|||||| || ||||||||||| |||||| |||| | |||||||| ||||| || ||||| ||| | |||||||| |||||||||||| | ||| | |
|
|
| T |
8647194 |
agatgccggggccattgctggccttaatatcatccggataatcaatgaaccaacagctgctgctctcgcatatggccttgacaagagaacaaattgtgct |
8647095 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
||||||||||||| |||| |||||||||||||| ||||||||||||||| |||||| ||| |||| | |||||| | || |||||||| |||| |
|
|
| T |
8647094 |
gaagaacgaaatatattcatcttcgaccttggtggtggaacttttgatgtgtctctccttacaattaaggataaggtctttcatgttaaagccaccgctg |
8646995 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttg |
271 |
Q |
| |
|
||||||| ||||| || |||||||||||||||| ||||||||| || |||||| |
|
|
| T |
8646994 |
gaaacactcacctcggaggagaggactttgatagtagaatggtggaccactttg |
8646941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 17268256 - 17267996
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaa-taatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtga |
116 |
Q |
| |
|
||||||||||| ||||||||| |||||||| ||| || ||||||| ||||| ||||||||||||||||||||||| ||| |||||||| | | ||| |
|
|
| T |
17268256 |
agatgctggtgtcattgctggccttaatgt-attgaaggtaatcaatgaaccaactgctgcagctattgcatatggccttggcaagagaactaactgtgt |
17268158 |
T |
|
| Q |
117 |
tcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgct |
216 |
Q |
| |
|
| |||| ||||| ||||||||||||||||||||||| ||||||||||||||| || ||| ||| |||| | ||||| ||||| || ||||| | | |
|
|
| T |
17268157 |
tgaagaacggaatatttttgtctttgaccttggtggtgggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggt |
17268058 |
T |
|
| Q |
217 |
ggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagagga |
278 |
Q |
| |
|
||| |||| || || || || |||||||||||||| |||||||| |||| ||||| ||||| |
|
|
| T |
17268057 |
ggagacactcatcttgggggtgaggactttgataatagaatggtatactattttgttgagga |
17267996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 6789829 - 6789566
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
||||||||||||||||||||| |||||||| || | ||||||||| ||||| || ||||| ||| |||||||||| |||| ||||||| | | | | |
|
|
| T |
6789829 |
agatgctggtgccattgctggtcttaatgttatacgaataatcaatgaaccaacagctgctgctcttgcatatggccttgataagagaactaattacggt |
6789730 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
| || |||||| || ||||| |||||||||||||| ||||| |||||||||||| | | |||||| | | ||||| |||| || ||||| | || |
|
|
| T |
6789729 |
ggagaaaaaaatattttcgtcttcgaccttggtggtggcactttcgatgtgtctatcttaacaatcaaagataaggtcttccaagttaaggccaccggtg |
6789630 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagtt |
281 |
Q |
| |
|
||||||| ||||| || |||||||||||||||||| || |||| |||||||||| ||||||||| |
|
|
| T |
6789629 |
gaaacactcacctcggaggagaggactttgataaccgattggtaaactactttgcagaggagtt |
6789566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 8545843 - 8545675
Alignment:
| Q |
125 |
gaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacac |
224 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||| ||||||||||||||||| |||| ||| || | |||||||| || || |||||||||||| |||| |
|
|
| T |
8545843 |
gaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattcttacaattaaaaataaggtctttgatgtcaaggccactgctggagacac |
8545744 |
T |
|
| Q |
225 |
ccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaa |
293 |
Q |
| |
|
||||||| || || ||||||||||||||||||||||| |||||||| |||||||||| | |||||| |
|
|
| T |
8545743 |
ttacctaggcggtgaagactttgataacagaatggtgaattactttgtgaaggagttcaagaggaagaa |
8545675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 271
Target Start/End: Original strand, 29581729 - 29581945
Alignment:
| Q |
55 |
ataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaacgaaatatatttgtctttgaccttggtggtg |
154 |
Q |
| |
|
|||||||||||||| |||||||| || ||||||||||| || | ||| || || | || | | |||||||||||||| ||||||| |||||||||| |
|
|
| T |
29581729 |
ataatcaacgaaccaactgctgctgcacttgcatatggtattcaaaagggaggtaattttgttggaaaacgaaatatattcatctttgatcttggtggtg |
29581828 |
T |
|
| Q |
155 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
254 |
Q |
| |
|
| ||||||||||||||| | || | | |||||| || | |||||||| || ||||||||||| | || |||||||| |||||||||||||||||| | |
|
|
| T |
29581829 |
gcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctggcgatactcacctaggaggagaggactttgataaccg |
29581928 |
T |
|
| Q |
255 |
aatggtgaactactttg |
271 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
29581929 |
aatggtgaattactttg |
29581945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 64 - 286
Target Start/End: Complemental strand, 17260512 - 17260290
Alignment:
| Q |
64 |
gaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttg |
163 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||| |||||||| | | ||| | ||| ||||| |||||||||||||||||||| || ||||||| |
|
|
| T |
17260512 |
gaacctattgctgcagctattgcatatggccttgtcaagagaactaattgtgtttaagtacggaatatttttgtctttgaccttggtggggggacttttg |
17260413 |
T |
|
| Q |
164 |
atgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaa |
263 |
Q |
| |
|
|||||||| || ||| ||| |||| | ||||| ||||| || ||||| | |||| |||| || || || || |||||||||||||| ||||||||| | |
|
|
| T |
17260412 |
atgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataatagaatggtgta |
17260313 |
T |
|
| Q |
264 |
ctactttgtagaggagttcaaaa |
286 |
Q |
| |
|
||| |||||||||||| |||||| |
|
|
| T |
17260312 |
ctattttgtagaggagatcaaaa |
17260290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 8590836 - 8590713
Alignment:
| Q |
137 |
tctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtgg |
236 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||| | || | | |||| |||| | |||||| |||||||||||| | ||| | ||||||||||| || |
|
|
| T |
8590836 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
8590737 |
T |
|
| Q |
237 |
agaggactttgataacagaatggt |
260 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
8590736 |
agaggactttgataacagaatggt |
8590713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 293
Target Start/End: Complemental strand, 3147472 - 3147306
Alignment:
| Q |
127 |
aatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacaccc |
226 |
Q |
| |
|
||||| ||| |||||||| | |||||||| ||||||||||||||| | |||| ||| |||| | |||||| |||| || |||| || |||||||||| |
|
|
| T |
3147472 |
aatatttttatctttgacttgggtggtgggacttttgatgtgtctcttcttacaattaaggataaggtctttcaagttaaggccatcgcaggaaacaccc |
3147373 |
T |
|
| Q |
227 |
acctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaa |
293 |
Q |
| |
|
|||| || ||||||||||||||||| || |||||||||||||||| | |||||| || |||||||| |
|
|
| T |
3147372 |
accttgggggagaggactttgataataggatggtgaactactttgcacgggagtttaagaagaagaa |
3147306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 283
Target Start/End: Complemental strand, 8576644 - 8576378
Alignment:
| Q |
17 |
aagatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtga |
116 |
Q |
| |
|
||||||| ||||| |||||||| || |||||||| || |||||||| ||||| ||||| |||||| |||| ||||| || | |||||| | | ||| |
|
|
| T |
8576644 |
aagatgcaggtgcaattgctggtctcaatgtcatgcagataatcaatgaaccgactgcggcagctcttgcgtatggccttcaaaagagagctaattgtgt |
8576545 |
T |
|
| Q |
117 |
tcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgct |
216 |
Q |
| |
|
| |||| ||||||| ||| ||||||||||||| ||||| ||||||||||||||||| || | | | ||| |||||| ||||| || |||||||| |
|
|
| T |
8576544 |
tgataaaagaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgcc |
8576445 |
T |
|
| Q |
217 |
ggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttca |
283 |
Q |
| |
|
||| |||| |||||||| || | ||||||||||||| ||||||| | ||||||| ||||||||| |
|
|
| T |
8576444 |
ggagacactcacctaggaggccaagactttgataacataatggtggatcactttgttaaggagttca |
8576378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 297
Target Start/End: Original strand, 8382846 - 8383006
Alignment:
| Q |
137 |
tctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtgg |
236 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||| |||| | ||| ||| | |||||||| || || |||||||| ||| |||| || ||||| || |
|
|
| T |
8382846 |
tctttgatcttggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacactcatctaggagg |
8382945 |
T |
|
| Q |
237 |
agaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataat |
297 |
Q |
| |
|
|| ||||| ||||||||||| ||||| |||||||| || |||||||| | |||| ||||| |
|
|
| T |
8382946 |
tgaagacttagataacagaatcgtgaagtactttgttgacgagttcaagaggaagcataat |
8383006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 8602170 - 8602037
Alignment:
| Q |
139 |
tttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggag |
238 |
Q |
| |
|
||||| ||||||||||| ||||||||||| ||| | || | ||| ||| | | |||||||||| || |||||| | ||| |||| ||||| || |||| |
|
|
| T |
8602170 |
tttgatcttggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacaccttggaggag |
8602071 |
T |
|
| Q |
239 |
aggactttgataacagaatggtgaactactttgt |
272 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||| |
|
|
| T |
8602070 |
aggactttgataaccgaatggtgaaccactttgt |
8602037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 273
Target Start/End: Complemental strand, 8559531 - 8559395
Alignment:
| Q |
137 |
tctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtgg |
236 |
Q |
| |
|
||||||| || |||||||| ||||||||||| ||| | || | ||| ||| | | |||||||||| || |||||| | ||| |||| ||||| || || |
|
|
| T |
8559531 |
tctttgatctcggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacacctcggagg |
8559432 |
T |
|
| Q |
237 |
agaggactttgataacagaatggtgaactactttgta |
273 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8559431 |
agaggactttgataacagaatggtgaaacactttgta |
8559395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 272
Target Start/End: Complemental strand, 8581910 - 8581763
Alignment:
| Q |
125 |
gaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacac |
224 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||| ||||||||||||||||| || | | | ||| | | || |||||| || |||||||||||| |||| |
|
|
| T |
8581910 |
gaaatatttttatctttgaccttggaggtggaacttttgatgtgtctattctcacagttaagaataacgactatgaagtcaaggccactgctggagacac |
8581811 |
T |
|
| Q |
225 |
ccacctaggtggagaggactttgataacagaatggtgaactactttgt |
272 |
Q |
| |
|
||||| || || || || |||||||||||||||||||| ||||||| |
|
|
| T |
8581810 |
tcacctgggaggggaagattttgataacagaatggtgaatcactttgt |
8581763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 272
Target Start/End: Complemental strand, 39985844 - 39985709
Alignment:
| Q |
137 |
tctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtgg |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| | || | || | | ||| ||||||| || |||||||| || ||| ||||||| || || || |
|
|
| T |
39985844 |
tctttgaccttggtggtggtacttttgatgtctctttgctaactattgaagagggtatctttgaggtgaaagccacagccggagacacccatcttggagg |
39985745 |
T |
|
| Q |
237 |
agaggactttgataacagaatggtgaactactttgt |
272 |
Q |
| |
|
||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
39985744 |
tgaggattttgacaacagaatggtgaaccactttgt |
39985709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 7877761 - 7877830
Alignment:
| Q |
195 |
ctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaac |
264 |
Q |
| |
|
|||||| |||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7877761 |
ctttgatgtaatagctactgccggagatactcacctaggtggagaggactttgataacagaatgttgaac |
7877830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 3147589 - 3147501
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaa |
106 |
Q |
| |
|
||||||||||| |||||||| |||||| | || | |||||||| ||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
3147589 |
agatgctggtgttattgctggccttaatattatgcggataatcaatgaacctactgctgcagctattgcgtatggactggacaagagaa |
3147501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 8570521 - 8570353
Alignment:
| Q |
125 |
gaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacac |
224 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||| ||||||||||||||||| || | | | |||| | || |||||| || |||||||||||| |||| |
|
|
| T |
8570521 |
gaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaaggataacaactatgaagtcaaggccactgctggagacac |
8570422 |
T |
|
| Q |
225 |
ccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaa |
293 |
Q |
| |
|
||||| || || || || ||||||||||||||| ||| ||||||| || ||||||| |||||||| |
|
|
| T |
8570421 |
tcacctgggaggtgaagattttgataacagaatgttgactcactttgtgaagaagttcaagaagaagaa |
8570353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 272
Target Start/End: Original strand, 29577629 - 29577777
Alignment:
| Q |
124 |
cgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaaca |
223 |
Q |
| |
|
|||||| |||| ||||||| ||||||||||| || |||||||||||| | || | | | |||| || | ||||||||||| ||||||||||| | | |
|
|
| T |
29577629 |
cgaaatgtattcatctttgatcttggtggtggcacctttgatgtgtctcttctcacacttaaggatgatagttttgaagtaaaggccactgctggtgata |
29577728 |
T |
|
| Q |
224 |
cccacctaggtggagaggactttgataacagaatggtgaactactttgt |
272 |
Q |
| |
|
| |||||||| ||||||||||| ||||| | |||||||| | ||||||| |
|
|
| T |
29577729 |
ctcacctaggaggagaggacttcgataataaaatggtgagccactttgt |
29577777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 8610041 - 8609961
Alignment:
| Q |
211 |
actgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaag |
291 |
Q |
| |
|
||||||||| | || ||||| || ||||||||||||||| |||||||||| || ||||||| |||||||||||| |||| |
|
|
| T |
8610041 |
actgctggagatactcaccttggaggagaggactttgatcacagaatggttaatcactttgtgaaggagttcaaaaggaag |
8609961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 8538354 - 8538282
Alignment:
| Q |
17 |
aagatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcata |
89 |
Q |
| |
|
|||||||||||| ||||||||| || ||||| || | |||||||| |||||||| ||||| ||| ||||||| |
|
|
| T |
8538354 |
aagatgctggtgtcattgctggcctcaatgtaatgcggataatcaatgaacctacagctgctgctcttgcata |
8538282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 183; Significance: 5e-99; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 16657368 - 16657646
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
16657368 |
agatgctggtgccatcgctggccttaatgtcattcgaattatcaatgaacctactgctgcagctattgcatatggtcttgacaagagaagtgattgtgat |
16657467 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||| ||||| |||||||||||||| | |
|
|
| T |
16657468 |
ggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgccg |
16657567 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
296 |
Q |
| |
|
||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16657568 |
gaaacactcaccttgggggagaggactttgataacagaacggtgaactactttgtagaggagtttcaaaagaagaataa |
16657646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 16661844 - 16662097
Alignment:
| Q |
19 |
gatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatc |
118 |
Q |
| |
|
|||||||||||||||||||| ||||| || | |||||||| ||||| ||||| ||||||||||||||||| ||||||| |||||| | ||||| |
|
|
| T |
16661844 |
gatgctggtgccattgctggccttaacgttgtgaggataatcaatgaacccactgcagcagctattgcatatggccttgacaaaagaagtaattgtgatg |
16661943 |
T |
|
| Q |
119 |
gtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctgg |
218 |
Q |
| |
|
|| || ||||||| ||||||||||| ||||||||||| ||||||||||||||| |||| | ||| || |||| |||||||||||| ||||||||| |||| |
|
|
| T |
16661944 |
gtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctgg |
16662043 |
T |
|
| Q |
219 |
aaacacccacctaggtggagaggactttgataacagaatggtgaactactttgt |
272 |
Q |
| |
|
|||||| ||||| || |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16662044 |
aaacactcacctcgggggagaggactttgataacagaatgttgaactactttgt |
16662097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 272
Target Start/End: Complemental strand, 14703679 - 14703471
Alignment:
| Q |
64 |
gaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttg |
163 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||| ||| || | | |||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
14703679 |
gaacctacagctgcagctattgcatatggccttgacaagagaactgattatggtggagaacgtaatatatttgtctttgatcttggtggtggtacttttg |
14703580 |
T |
|
| Q |
164 |
atgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaa |
263 |
Q |
| |
|
| |||||| |||| | ||| ||||| ||||| || | || || |||||||||||||| ||||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
14703579 |
acgtgtctctcctaacaattaagggcaccgtcttccaaattaaggctactgctggaaacactcacctcgggggagaggacttcgataacagaatggtgaa |
14703480 |
T |
|
| Q |
264 |
ctactttgt |
272 |
Q |
| |
|
||||||||| |
|
|
| T |
14703479 |
ctactttgt |
14703471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 12235006 - 12234757
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
||||||||||| ||||||||| || ||||| || |||| |||||||| | || || ||| ||||||||||| |||||||||||| ||| ||| | |
|
|
| T |
12235006 |
agatgctggtgtcattgctggcctcaatgttatgagggtaatgaacgaacccatggcagccgctgttgcatatggtcttgacaagagaactgattgtgtt |
12234907 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
| |||||||||| ||||| ||||| || || ||||| ||||||||||||||| |||| | |||||| ||| |||||| |||| |||||||| || | |
|
|
| T |
12234906 |
ggagaacgaaatatttttgtttttgatctcggcggtggcacttttgatgtgtctctcctaacaatcaaaggtaatgtcttccaagttaaagccacagccg |
12234807 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactac |
267 |
Q |
| |
|
||||||| ||||| || |||||||||||||||||||||||||| |||||| |
|
|
| T |
12234806 |
gaaacactcacctcgggggagaggactttgataacagaatggtaaactac |
12234757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 284
Target Start/End: Original strand, 12258478 - 12258698
Alignment:
| Q |
64 |
gaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaa-cgaaatatatttgtctttgaccttggtggtggtactttt |
162 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||| |||| | | ||| ||| ||| || ||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
12258478 |
gaacctactgctgcagcttttgcatatggccttgacaaaagaattaattgtg-tcgaaaaacggaatatttttgtctttgatcttggtggtggcactttt |
12258576 |
T |
|
| Q |
163 |
gatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtga |
262 |
Q |
| |
|
||||||||| | || | || |||| | ||||||| |||| || || || ||||||||||| ||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
12258577 |
gatgtgtctctactaaccattaaggataatgtctttcaagttaaggctacagctggaaacacgcaccttggaggagaggactttgataatagaatggtga |
12258676 |
T |
|
| Q |
263 |
actactttgtagaggagttcaa |
284 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
12258677 |
gttactttgtagaagagttcaa |
12258698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 271
Target Start/End: Complemental strand, 43625625 - 43625476
Alignment:
| Q |
122 |
aacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaa |
221 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||||| || ||||||||||||||||| |
|
|
| T |
43625625 |
aacgaaatattttcatctttgaccttggtggtggtacttttgatgtgtctatacttacaattaaggacaaggtcttccgtgttaaagccactgctggaaa |
43625526 |
T |
|
| Q |
222 |
cacccacctaggtggagaggactttgataacagaatggtgaactactttg |
271 |
Q |
| |
|
||| ||||| || ||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
43625525 |
cactcaccttggaggagaggactttgatgatagaatggtgaactactttg |
43625476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 284
Target Start/End: Complemental strand, 7542497 - 7542277
Alignment:
| Q |
64 |
gaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttg |
163 |
Q |
| |
|
||||||||||| |||||| |||||||||| |||||||||||| ||| |||| | | |||||||| ||||| ||||| ||||| ||||| ||||||| |
|
|
| T |
7542497 |
gaacctactgccgcagctgttgcatatggccttgacaagagaactgattatgatggagagcgaaatatttttgtttttgatcttggcggtggcacttttg |
7542398 |
T |
|
| Q |
164 |
atgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaa |
263 |
Q |
| |
|
|||||||| | || | || ||||| ||| |||| || ||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||| ||| |
|
|
| T |
7542397 |
atgtgtctttactaacgattaagggcaacaacttccaagttaaggccactgctggcaacactcaccttggtggagaagactttgataatagaatggcgaa |
7542298 |
T |
|
| Q |
264 |
ctactttgtagaggagttcaa |
284 |
Q |
| |
|
|||||||||| | |||||||| |
|
|
| T |
7542297 |
ctactttgtacaagagttcaa |
7542277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 284
Target Start/End: Original strand, 12245303 - 12245523
Alignment:
| Q |
64 |
gaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatcgtaaacgaaatatatttgtctttgaccttggtggtggtacttttg |
163 |
Q |
| |
|
||||| |||||||||||| |||||||||| |||| |||||| ||| ||| | | || |||| || ||||| ||||| ||||||||||| ||||||| |
|
|
| T |
12245303 |
gaacccactgctgcagctgttgcatatggccttgaaaagagagctgattgtgttggagaaagaaacatttttgtgtttgatcttggtggtggcacttttg |
12245402 |
T |
|
| Q |
164 |
atgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaa |
263 |
Q |
| |
|
| || |||||||| | || |||| | |||| |||| || ||||||||||||||||| ||||| || |||||||| |||||||| |||||||| || |
|
|
| T |
12245403 |
acgtttctatcctaactattaaggataacatcttccaagttaaggccactgctggaaacactcaccttggaggagaggattttgataatagaatggtaaa |
12245502 |
T |
|
| Q |
264 |
ctactttgtagaggagttcaa |
284 |
Q |
| |
|
|||||||| | |||||||||| |
|
|
| T |
12245503 |
ctactttgcacaggagttcaa |
12245523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 167
Target Start/End: Original strand, 17716657 - 17716687
Alignment:
| Q |
137 |
tctttgaccttggtggtggtacttttgatgt |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
17716657 |
tctttgaccttggtggtggtacttttgatgt |
17716687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 167
Target Start/End: Original strand, 17717918 - 17717948
Alignment:
| Q |
137 |
tctttgaccttggtggtggtacttttgatgt |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
17717918 |
tctttgaccttggtggtggtacttttgatgt |
17717948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 17716546 - 17716626
Alignment:
| Q |
20 |
atgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgaca |
100 |
Q |
| |
|
|||||||||| |||||||| |||||| |||| ||| || || || || ||||||||||| ||||| ||||||||||||| |
|
|
| T |
17716546 |
atgctggtgctattgctggtcttaatttcatgagaattattaatgagcccactgctgcagccattgcttatggttttgaca |
17716626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 17717819 - 17717887
Alignment:
| Q |
32 |
ttgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgaca |
100 |
Q |
| |
|
||||||| ||||||||||| |||| ||| | || || ||||||||||| ||||| ||||||||||||| |
|
|
| T |
17717819 |
ttgctggtcttaatgtcatggaaattatcgatgagcccactgctgcagccattgcttatggttttgaca |
17717887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 139; Significance: 9e-73; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 9335742 - 9336020
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
|||||||||| | |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||| ||||| |
|
|
| T |
9335742 |
agatgctggtactattgctggccttaatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgataagagaaatgactgtgat |
9335841 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||||| ||||||||||||||||||||||| | ||| ||||||| | | ||||||||||||||||| || | |
|
|
| T |
9335842 |
ggtaaccgaaatatttttgtctttgatctgggtggcggtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagccaccgcag |
9335941 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataa |
296 |
Q |
| |
|
||||||| ||||| || || ||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||||||| |
|
|
| T |
9335942 |
gaaacacgcaccttggaggcgaggactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaataa |
9336020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 30775568 - 30775309
Alignment:
| Q |
19 |
gatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgatc |
118 |
Q |
| |
|
|||||||||||||||||||| |||||||| || |||||| || || || ||||| ||||||||||||||||| |||| |||||| || ||||| |
|
|
| T |
30775568 |
gatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatg |
30775469 |
T |
|
| Q |
119 |
gtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctgg |
218 |
Q |
| |
|
| | | ||||| ||||||||||| ||||||||||| ||||||||||||||| | || | || | | || ||| |||||||| ||||| |||||||| |
|
|
| T |
30775468 |
ctgagaggaatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaactgctgg |
30775369 |
T |
|
| Q |
219 |
aaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagagga |
278 |
Q |
| |
|
|||||| ||| | || |||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
30775368 |
aaacactcacatcgggggagaggactttgataacagaatgttgaattactttgtagagga |
30775309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 284
Target Start/End: Complemental strand, 35132765 - 35132499
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
|||||||||||| |||||||| | ||||| || | |||| || ||||||||||| ||||| |||||||||| ||||||||||| ||| ||| | |
|
|
| T |
35132765 |
agatgctggtgctattgctggtcccaatgttatgagagtaatgaatgaacctactgccgcagcggttgcatatggccttgacaagagatctgattgtgct |
35132666 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctg |
217 |
Q |
| |
|
| ||| |||||| |||||||| || ||||||||||| ||||||||||| || || |||| || |||| | |||||| |||| || |||||||| | |
|
|
| T |
35132665 |
ggagaacaaaatatttttgtcttcgatcttggtggtggcacttttgatgtttcaatacttactattaaggataatgtcttccaagttaaggccactgccg |
35132566 |
T |
|
| Q |
218 |
gaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaa |
284 |
Q |
| |
|
||||||| || || |||||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
35132565 |
gaaacactcatctcggtggagaggactttgataacagaatggtgaactactttgtacaagagttcaa |
35132499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 43745166 - 43744997
Alignment:
| Q |
18 |
agatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatggttttgacaagagaagtgaaagtgat |
117 |
Q |
| |
|
||||||||||||||||||||| ||| |||| || | |||||||| ||||| |||||||||||||||||||||||| | || ||||||| | | || |
|
|
| T |
43745166 |
agatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaactaactctgtg |
43745067 |
T |
|
| Q |
118 |
cgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagg |
187 |
Q |
| |
|
|| | ||||||| || |||||||||| |||||||| ||||||||||||||| |||||| ||| |||| |
|
|
| T |
43745066 |
cgaggaagaaatattttcatctttgacctgggtggtgggacttttgatgtgtctctccttacaattaagg |
43744997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 12528700 - 12528567
Alignment:
| Q |
139 |
tttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggag |
238 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||| | |||| | | ||| | |||||| ||||| || |||||||| ||| |||| ||||| || |||| |
|
|
| T |
12528700 |
tttgaccttggcggtggaacttttgatgtgtctcttcttacagtaaagaataatgtcttcgaagtcaaggccactgccggagacactcaccttggaggag |
12528601 |
T |
|
| Q |
239 |
aggactttgataacagaatggtgaactactttgt |
272 |
Q |
| |
|
||||||||||||| |||||||||| ||||||| |
|
|
| T |
12528600 |
aggactttgataatcgaatggtgaatcactttgt |
12528567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 43744936 - 43744858
Alignment:
| Q |
215 |
ctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaa |
293 |
Q |
| |
|
|||||||||| ||||| || |||||||| |||||||| || |||||||||||||| | ||||||||| || |||||||| |
|
|
| T |
43744936 |
ctggaaacactcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaa |
43744858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 12528820 - 12528747
Alignment:
| Q |
19 |
gatgctggtgccattgctggacttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatatgg |
92 |
Q |
| |
|
|||||||||| ||||||||| || ||||| || | |||||||||||||| ||||| || ||| |||||||||| |
|
|
| T |
12528820 |
gatgctggtgtcattgctggcctcaatgtaatacggataatcaacgaaccaactgcagctgctcttgcatatgg |
12528747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 28220045 - 28219960
Alignment:
| Q |
208 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaa |
293 |
Q |
| |
|
||||| ||||||||||| ||||| || |||||||||||||||| || |||||||||||||| | ||||||||| || |||||||| |
|
|
| T |
28220045 |
gccaccgctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaa |
28219960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 28220164 - 28220099
Alignment:
| Q |
122 |
aacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagg |
187 |
Q |
| |
|
|||||||||| || |||||||||| |||||||| ||||||||||||||| |||||| ||| |||| |
|
|
| T |
28220164 |
aacgaaatattttcatctttgacctgggtggtgggacttttgatgtgtctctccttagaataaagg |
28220099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 11314610 - 11314659
Alignment:
| Q |
41 |
ttaatgtcattcaaataatcaacgaacctactgctgcagctattgcatat |
90 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| ||||||||| ||||||||| |
|
|
| T |
11314610 |
ttaatgtcatgcaaataatcaatgaacctagtgctgcagccattgcatat |
11314659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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