View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1375_low_26 (Length: 263)
Name: NF1375_low_26
Description: NF1375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1375_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 54275088 - 54275318
Alignment:
| Q |
1 |
agaaaaacaacagactattatttggcccatgtccaatgaactcccgcacctagtaaagacacccctcatattttcatcttaatccttttccattattcta |
100 |
Q |
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| T |
54275088 |
agaaaaacaacagactattatttggcccatgtcaaatgaactcccgcacctagtaaagacacccctcatattttcatcttaatccttttccattattcta |
54275187 |
T |
|
| Q |
101 |
attttcaattttaaggtgaaaactcacccacatatttataatcttcctccatgcgaccttcattttccctttcatggcaaagtatgttgtgctctacctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54275188 |
attttcaattttaaggtgaaaactcacccacatatttataatcttcctccatgcgaccttcattttccctttcatggcaaagtatgttgtgctctacctc |
54275287 |
T |
|
| Q |
201 |
tatttgcgacgactctgtccttctcagcttg |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
54275288 |
tatttgcgacgactctgtccttctcagcttg |
54275318 |
T |
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